Marcia Levitus - Publications

Affiliations: 
Chemistry Arizona State University, Tempe, AZ, United States 
Area:
Biochemistry

73 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Ploetz E, Ambrose B, Barth A, Börner R, Erichson F, Kapanidis AN, Kim HD, Levitus M, Lohman TM, Mazumder A, Rueda D, Steffen FD, Cordes T, Magennis S, Lerner E. A new twist on PIFE: photoisomerisation-related fluorescence enhancement. Methods and Applications in Fluorescence. PMID 37726007 DOI: 10.1088/2050-6120/acfb58  0.305
2023 Ploetz E, Ambrose B, Barth A, Börner R, Erichson F, Kapanidis AN, Kim HD, Levitus M, Lohman TM, Mazumder A, Rueda D, Steffen FD, Cordes T, Magennis SW, Lerner E. A new twist on PIFE: photoisomerisation-related fluorescence enhancement. Arxiv. PMID 36866225  0.305
2020 Purohit A, Douma LG, Bloom LB, Levitus M. Potassium Glutamate and Glycine Betaine Induce Self-Assembly of the PCNA and β Sliding Clamps. Biophysical Journal. PMID 33221249 DOI: 10.1016/j.bpj.2020.11.013  0.315
2020 Matikonda SS, Hammersley G, Kumari N, Grabenhorst L, Glembockyte V, Tinnefeld P, Ivanic J, Levitus M, Schnermann MJ. Impact of Cyanine Conformational Restraint in the Near-Infrared Range. The Journal of Organic Chemistry. PMID 32275153 DOI: 10.1021/Acs.Joc.0C00236  0.403
2020 Levitus M. Tutorial: Measurement of fluorescence spectra and determination of relative fluorescence quantum yields of transparent samples. Methods and Applications in Fluorescence. PMID 32150732 DOI: 10.1088/2050-6120/Ab7E10  0.418
2020 Tavakoli M, Jazani S, Sgouralis I, Shafraz OM, Sivasankar S, Donaphon B, Levitus M, Pressé S. Pitching Single-Focus Confocal Data Analysis One Photon at a Time with Bayesian Nonparametrics Physical Review X. 10. DOI: 10.1103/Physrevx.10.011021  0.385
2019 Birch DJS, Mely Y, Levitus M. MAF leads fluorescence into the new decade. Methods and Applications in Fluorescence. PMID 31766035 DOI: 10.1088/2050-6120/Ab5B86  0.383
2019 Kumari N, Ciuba MA, Levitus M. Photophysical properties of the hemicyanine Dy-630 and its potential as a single-molecule fluorescent probe for biophysical applications. Methods and Applications in Fluorescence. PMID 31585443 DOI: 10.1088/2050-6120/Ab4B0D  0.515
2019 Jazani S, Sgouralis I, Shafraz OM, Levitus M, Sivasankar S, Pressé S. An alternative framework for fluorescence correlation spectroscopy. Nature Communications. 10: 3662. PMID 31413259 DOI: 10.1038/S41467-019-11574-2  0.422
2019 Nguyen B, Ciuba MA, Kozlov AG, Levitus M, Lohman TM. Protein Environment and DNA Orientation Affect Protein-Induced Cy3 Fluorescence Enhancement. Biophysical Journal. PMID 31235181 DOI: 10.1016/J.Bpj.2019.05.026  0.438
2018 Serban AJ, Breen IL, Bui HQ, Levitus M, Wachter RM. Assembly-disassembly is coupled to the ATPase cycle of tobacco Rubisco activase. The Journal of Biological Chemistry. PMID 30352875 DOI: 10.1074/Jbc.Ra118.005047  0.375
2018 Hellenkamp B, Schmid S, Doroshenko O, Opanasyuk O, Kühnemuth R, Adariani SR, Ambrose B, Aznauryan M, Barth A, Birkedal V, Bowen ME, Chen H, Cordes T, Eilert T, Fijen C, ... ... Levitus M, et al. Publisher Correction: Precision and accuracy of single-molecule FRET measurements-a multi-laboratory benchmark study. Nature Methods. PMID 30327572 DOI: 10.1038/S41592-018-0193-X  0.629
2018 Hellenkamp B, Schmid S, Doroshenko O, Opanasyuk O, Kühnemuth R, Rezaei Adariani S, Ambrose B, Aznauryan M, Barth A, Birkedal V, Bowen ME, Chen H, Cordes T, Eilert T, Fijen C, ... ... Levitus M, et al. Precision and accuracy of single-molecule FRET measurements-a multi-laboratory benchmark study. Nature Methods. 15: 669-676. PMID 30171252 DOI: 10.1038/S41592-018-0085-0  0.678
2018 Donaphon B, Bloom LB, Levitus M. PHOTOPHYSICAL CHARACTERIZATION OF INTERCHROMOPHORIC INTERACTIONS BETWEEN RHODAMINE DYES CONJUGATED TO PROTEINS. Methods and Applications in Fluorescence. PMID 29985159 DOI: 10.1088/2050-6120/Aad20F  0.478
2017 Douma LG, Yu KK, England JK, Levitus M, Bloom LB. Mechanism of opening a sliding clamp. Nucleic Acids Research. 45: 10178-10189. PMID 28973453 DOI: 10.1093/Nar/Gkx665  0.389
2017 Michie MS, Götz R, Franke C, Bowler M, Kumari N, Magidson V, Levitus M, Loncarek J, Sauer M, Schnermann MJ. Cyanine Conformational Restraint in the Far-Red Range. Journal of the American Chemical Society. PMID 28862842 DOI: 10.1021/Jacs.7B07272  0.378
2017 Purohit A, England JK, Douma LG, Tondnevis F, Bloom LB, Levitus M. Electrostatic Interactions at the Dimer Interface Stabilize the E. coli β Sliding Clamp. Biophysical Journal. 113: 794-804. PMID 28834716 DOI: 10.1016/J.Bpj.2017.06.057  0.453
2017 Levitus M. The Photophysics of Pife and other Photophysical Process that Affect Single-Molecule Dyes Biophysical Journal. 112: 8a. DOI: 10.1016/J.Bpj.2016.11.067  0.487
2016 Tang S, Donaphon B, Levitus M, Raymo FM. Structural Implications on the Properties of Self-Assembling Supramolecular Hosts for Fluorescent Guests. Langmuir : the Acs Journal of Surfaces and Colloids. PMID 27490893 DOI: 10.1021/Acs.Langmuir.6B01549  0.375
2015 Stennett EM, Ciuba MA, Lin S, Levitus M. Demystifying PIFE: The Photophysics Behind the Protein-Induced Fluorescence Enhancement Phenomenon in Cy3. The Journal of Physical Chemistry Letters. 6: 1819-23. PMID 26263254 DOI: 10.1021/Acs.Jpclett.5B00613  0.478
2015 Shepherd Stennett EM, Anna Ciuba M, Levitus M. Deconstructing PIFE: A Spectroscopic Investigation of the “Protein Induced Fluorescence Enhancement” Phenomenon in Cy3 Biophysical Journal. 108: 337a. DOI: 10.1016/J.Bpj.2014.11.1837  0.511
2014 Kuriata AM, Chakraborty M, Henderson JN, Hazra S, Serban AJ, Pham TV, Levitus M, Wachter RM. ATP and magnesium promote cotton short-form ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) activase hexamer formation at low micromolar concentrations. Biochemistry. 53: 7232-46. PMID 25357088 DOI: 10.1021/Bi500968H  0.754
2014 Kanno DM, Levitus M. Protein oligomerization equilibria and kinetics investigated by fluorescence correlation spectroscopy: a mathematical treatment. The Journal of Physical Chemistry. B. 118: 12404-15. PMID 25268328 DOI: 10.1021/Jp507741R  0.397
2014 Binder JK, Douma LG, Ranjit S, Kanno DM, Chakraborty M, Bloom LB, Levitus M. Intrinsic stability and oligomerization dynamics of DNA processivity clamps. Nucleic Acids Research. 42: 6476-86. PMID 24728995 DOI: 10.1093/Nar/Gku255  0.752
2014 Stennett EM, Ma N, van der Vaart A, Levitus M. Photophysical and dynamical properties of doubly linked Cy3-DNA constructs. The Journal of Physical Chemistry. B. 118: 152-63. PMID 24328104 DOI: 10.1016/J.Bpj.2013.11.448  0.492
2014 Stennett EM, Ciuba MA, Levitus M. Photophysical processes in single molecule organic fluorescent probes. Chemical Society Reviews. 43: 1057-75. PMID 24141280 DOI: 10.1039/C3Cs60211G  0.44
2014 Stennett EM, Dotson DL, Denning EJ, Beckstein O, Levitus M. Investigating the Conformational Dynamics of DNA with Lesions through Fluorescence-Based Technniques and Computer Simulations Biophysical Journal. 106: 68a. DOI: 10.1016/J.Bpj.2013.11.455  0.437
2014 Chakraborty M, Kuriata A, Henderson JN, Salvucci ME, Wachter R, Levitus M. ATP-Mg+2 Mediated Assembly of Rubisco Activase Investigated using Fluorescence Correlation Spectroscopy Biophysical Journal. 106: 40a. DOI: 10.1016/J.Bpj.2013.11.298  0.38
2014 Binder JK, Ranjit S, Chakraborty M, Kanno D, Douma L, Bloom L, Levitus M. Single Molecule Studies of DNA Replication Processivity Clamps Biophysical Journal. 106: 229a. DOI: 10.1016/J.Bpj.2013.11.1342  0.698
2013 Ciuba MA, Levitus M. Manganese-induced triplet blinking and photobleaching of single molecule cyanine dyes. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 14: 3495-502. PMID 24039065 DOI: 10.1002/Cphc.201300634  0.39
2013 Chakraborty M, Kuriata A, Henderson N, Wachter R, Levitus M. Self Assembly of Rubisco Activase Monitored by Fluorescence Fluctuation Spectroscopy Biophysical Journal. 104: 526a-527a. DOI: 10.1016/J.Bpj.2012.11.2913  0.438
2013 Ciuba M, Stennett E, Levitus M. Photoblinking and Photobleaching of Single Molecule Fluorescent Probes Induced by Mn2+ Biophysical Journal. 104: 346a. DOI: 10.1016/J.Bpj.2012.11.1924  0.493
2012 Chakraborty M, Kuriata AM, Nathan Henderson J, Salvucci ME, Wachter RM, Levitus M. Protein oligomerization monitored by fluorescence fluctuation spectroscopy: self-assembly of rubisco activase. Biophysical Journal. 103: 949-58. PMID 23009844 DOI: 10.1016/J.Bpj.2012.07.034  0.755
2012 Wang G, Dhar K, Swanson PC, Levitus M, Chang Y. Real-time monitoring of RAG-catalyzed DNA cleavage unveils dynamic changes in coding end association with the coding end complex. Nucleic Acids Research. 40: 6082-96. PMID 22434887 DOI: 10.1093/Nar/Gks255  0.418
2012 Ranjit S, Levitus M. Probing the interaction between fluorophores and DNA nucleotides by fluorescence correlation spectroscopy and fluorescence quenching. Photochemistry and Photobiology. 88: 782-91. PMID 22364288 DOI: 10.1111/J.1751-1097.2012.01121.X  0.691
2012 Stennett EM, Kodis G, Levitus M. Photobleaching and blinking of TAMRA induced by Mn(2+). Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 13: 909-13. PMID 22298337 DOI: 10.1002/Cphc.201100781  0.42
2012 Chakraborty M, Kuriata A, Henderson N, Wachter R, Levitus M. Investigating the Stoichiometry of RuBisCO Activase by Fluorescence Fluctuation Methods Biophysical Journal. 102: 179a. DOI: 10.1016/J.Bpj.2011.11.974  0.417
2012 Ranjit S, Douma L, Bloom LB, Levitus M. The Stability and Dynamics of E-Coli Beta-Clamp by Single Molecule and Fluorescence Correlation Spectroscopy Biophysical Journal. 102: 179a. DOI: 10.1016/J.Bpj.2011.11.973  0.694
2012 Binder JK, Shinde S, Woodrum B, Ghirlanda G, Levitus M. Monitoring Dimerization of GpA using FRET Biophysical Journal. 102: 267a. DOI: 10.1016/J.Bpj.2011.11.1467  0.328
2012 Stennett E, Levitus M. Blinking and Bleaching of Tetramethylrhodamine on DNA Induced by Paramagnetic Cations Biophysical Journal. 102: 208a. DOI: 10.1016/J.Bpj.2011.11.1135  0.517
2011 Tims HS, Gurunathan K, Levitus M, Widom J. Dynamics of nucleosome invasion by DNA binding proteins. Journal of Molecular Biology. 411: 430-48. PMID 21669206 DOI: 10.1016/J.Jmb.2011.05.044  0.7
2011 Spiriti J, Binder JK, Levitus M, van der Vaart A. Cy3-DNA stacking interactions strongly depend on the identity of the terminal basepair. Biophysical Journal. 100: 1049-57. PMID 21320450 DOI: 10.1016/J.Bpj.2011.01.014  0.466
2011 Levitus M, Ranjit S. Cyanine dyes in biophysical research: the photophysics of polymethine fluorescent dyes in biomolecular environments. Quarterly Reviews of Biophysics. 44: 123-51. PMID 21108866 DOI: 10.1017/S0033583510000247  0.693
2011 Levitus M. Chemical kinetics at the single-molecule level Journal of Chemical Education. 88: 162-166. DOI: 10.1021/Ed100371M  0.316
2011 Levitus M. Handbook of Fluorescence Spectroscopy and Imaging. From Ensemble to Single Molecules. Edited by Markus Sauer, Johan Hofkens and Jörg Enderlein. Angewandte Chemie International Edition. 50: 9017-9018. DOI: 10.1002/Anie.201104398  0.394
2011 Levitus M. Handbook of Fluorescence Spectroscopy and Imaging. From Ensemble to Single Molecules. Herausgegeben von Markus Sauer, Johan Hofkens und Jörg Enderlein. Angewandte Chemie. 123: 9179-9180. DOI: 10.1002/Ange.201104398  0.394
2010 Levitus M. Relaxation Kinetics by Fluorescence Correlation Spectroscopy: Determination of Kinetic Parameters in the Presence of Fluorescent Impurities. The Journal of Physical Chemistry Letters. 1: 1346-1350. PMID 20454591 DOI: 10.1021/Jz100231V  0.481
2010 Gurunathan K, Levitus M. FRET fluctuation spectroscopy of diffusing biopolymers: contributions of conformational dynamics and translational diffusion. The Journal of Physical Chemistry. B. 114: 980-6. PMID 20030305 DOI: 10.1021/Jp907390N  0.695
2010 Levitus M. Sequence-dependent photophysical properties of Cy3-labeled DNA Progress in Biomedical Optics and Imaging - Proceedings of Spie. 7576. DOI: 10.1117/12.841060  0.488
2010 Harvey BJ, Claudia P, Levitus M. Sequence-Dependent Enhancement of Cy3 Fluorescence on DNA Biophysical Journal. 98: 582a. DOI: 10.1016/J.Bpj.2009.12.3161  0.518
2010 Gurunathan K, Levitus M. Position Dependent Site-Exposure Nucleosome Dynamics by FRET-FCS Biophysical Journal. 98: 187a. DOI: 10.1016/J.Bpj.2009.12.1003  0.711
2009 Gurunathan K, Levitus M. Single-molecule fluorescence studies of nucleosome dynamics. Current Pharmaceutical Biotechnology. 10: 559-68. PMID 19689324 DOI: 10.2174/138920109788922074  0.741
2009 Harvey BJ, Perez C, Levitus M. DNA sequence-dependent enhancement of Cy3 fluorescence. Photochemical & Photobiological Sciences : Official Journal of the European Photochemistry Association and the European Society For Photobiology. 8: 1105-10. PMID 19639111 DOI: 10.1039/B905078G  0.512
2009 Ranjit S, Gurunathan K, Levitus M. Photophysics of backbone fluorescent DNA modifications: reducing uncertainties in FRET. The Journal of Physical Chemistry. B. 113: 7861-6. PMID 19473039 DOI: 10.1021/Jp810842U  0.776
2009 Harvey BJ, Levitus M. Nucleobase-specific enhancement of Cy3 fluorescence. Journal of Fluorescence. 19: 443-8. PMID 18972191 DOI: 10.1007/S10895-008-0431-1  0.434
2009 Ranjit S, Levitus M. Backbone Fluorescent DNA Modifications: Reducing Uncertainties In FRET Biophysical Journal. 96: 403a. DOI: 10.1016/J.Bpj.2008.12.2051  0.678
2009 Harvey B, Levitus M. Sequence-Dependent Cy3-DNA Interactions: Effects On Fluorescence Properties Biophysical Journal. 96: 401a. DOI: 10.1016/J.Bpj.2008.12.2041  0.515
2009 Gurunathan K, Levitus M. Unraveling Nucleosome Dynamics Using Fluorescence Fluctuation Analysis Biophysical Journal. 96: 292a. DOI: 10.1016/J.Bpj.2008.12.1448  0.734
2008 Gurunathan K, Levitus M. Applications of fluorescence correlation spectroscopy to the study of nucleic acid conformational dynamics. Progress in Nucleic Acid Research and Molecular Biology. 82: 33-69. PMID 18929138 DOI: 10.1016/S0079-6603(08)00002-0  0.732
2007 Sanborn ME, Connolly BK, Gurunathan K, Levitus M. Fluorescence properties and photophysics of the sulfoindocyanine Cy3 linked covalently to DNA. The Journal of Physical Chemistry. B. 111: 11064-74. PMID 17718469 DOI: 10.1021/Jp072912U  0.756
2007 Torres T, Levitus M. Measuring conformational dynamics: a new FCS-FRET approach. The Journal of Physical Chemistry. B. 111: 7392-400. PMID 17547447 DOI: 10.1021/Jp070659S  0.444
2005 Li G, Levitus M, Bustamante C, Widom J. Rapid spontaneous accessibility of nucleosomal DNA. Nature Structural & Molecular Biology. 12: 46-53. PMID 15580276 DOI: 10.1038/Nsmb869  0.557
2004 Goedken ER, Levitus M, Johnson A, Bustamante C, O'Donnell M, Kuriyan J. Fluorescence measurements on the E.coli DNA polymerase clamp loader: implications for conformational changes during ATP and clamp binding. Journal of Molecular Biology. 336: 1047-59. PMID 15037068 DOI: 10.1016/J.Jmb.2003.12.074  0.586
2002 Schmieder K, Levitus M, Dang H, Garcia-Garibay MA. Photophysical properties of coplanar and twisted 1,4-bis(9-ethynylanthracenyl)benzene. Rotational equilibration in the excited states of diaryalkynes Journal of Physical Chemistry A. 106: 1551-1556. DOI: 10.1021/Jp012775F  0.353
2001 Levitus M, Schmieder K, Ricks H, Shimizu KD, Bunz UH, Garcia-Garibay MA. Steps to demarcate the effects of chromophore aggregation and planarization in poly(phenyleneethynylene)s. 1. Rotationally interrupted conjugation in the excited states of 1,4-bis(phenylethynyl)benzene. Journal of the American Chemical Society. 123: 4259-65. PMID 11457192 DOI: 10.1021/Ja003959V  0.326
2001 Levitus M, Zepeda G, Dang H, Godinez C, Khuong TA, Schmieder K, Garcia-Garibay MA. Steps to demarcate the effects of chromophore aggregation and planarization in poly(phenyleneethynylene)s. 2. The photophysics of 1,4-diethynyl-2-fluorobenzene in solution and in crystals. The Journal of Organic Chemistry. 66: 3188-95. PMID 11325287 DOI: 10.1021/Jo015589E  0.384
2000 Levitus M, Garcia-Garibay MA. Polarized Electronic Spectroscopy and Photophysical Properties of 9,10-Bis(phenylethynyl)anthracene The Journal of Physical Chemistry A. 104: 8632-8637. DOI: 10.1021/Jp001483W  0.356
1999 Levitus M, Aramendía PF. Photochromism and thermochromism of phenanthrospirooxazine in poly(alkyl methacrylates) Journal of Physical Chemistry B. 103: 1864-1870. DOI: 10.1021/Jp9843151  0.607
1999 Levitus M, Schick G, Lunkwitz R, Rubin Y, Garcia-Garibay MA. Photophysical properties of hexapyrrolidine C60 adducts with Th and D3 symmetry: protonation of multiple basic sites Journal of Photochemistry and Photobiology a: Chemistry. 127: 13-19. DOI: 10.1016/S1010-6030(99)00139-2  0.393
1999 Levitus M, Bourdelande JL, Marqués G, Aramendía PF. Fluorescence anisotropy of dyes included in crosslinked polystyrene Journal of Photochemistry and Photobiology a: Chemistry. 126: 77-82. DOI: 10.1016/S1010-6030(99)00125-2  0.676
1997 Levitus M, Talhavini M, Negri RM, Atvars TDZ, Aramendía PF. Novel kinetic model in amorphous polymers. Spiropyran-merocyanine system revisited Journal of Physical Chemistry B. 101: 7680-7686. DOI: 10.1021/Jp963132G  0.623
1997 Levitus M, Glasser G, Neher D, Aramendía PF. Direct measurement of the dipole moment of a metastable merocyanine by electromechanical interferometry Chemical Physics Letters. 277: 118-124. DOI: 10.1016/S0009-2614(97)00826-9  0.616
1995 Levitus M, Negri RM, Aramendía PF. Rotational relaxation of carbocyanines. Comparative study with the isomerization dynamics Journal of Physical Chemistry. 99: 14231-14239. DOI: 10.1021/J100039A008  0.644
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