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Richard Cisek, Ph.D. - Publications

Affiliations: 
2012 Physics University of Toronto, Toronto, ON, Canada 
Area:
Optics Physics, General Biophysics, Nanotechnology
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68 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Jeon H, Harvey M, Cisek R, Bennett E, Tokarz D. Characterization of pathological stomach tissue using polarization-sensitive second harmonic generation microscopy. Biomedical Optics Express. 14: 5376-5391. PMID 37854565 DOI: 10.1364/BOE.500335  0.708
2023 Harvey M, Cisek R, Alizadeh M, Barzda V, Kreplak L, Tokarz D. High numerical aperture imaging allows chirality measurement in individual collagen fibrils using polarization second harmonic generation microscopy. Nanophotonics. 12: 2061-2071. PMID 37215945 DOI: 10.1515/nanoph-2023-0177  0.802
2023 Bennett E, Harvey M, Cisek R, Tokarz D. Investigation into the structure of crystalline maltodextrin particles by second harmonic generation microscopy. Biomedical Optics Express. 14: 1027-1040. PMID 36950239 DOI: 10.1364/BOE.481689  0.71
2022 Brittain K, Harvey M, Cisek R, Pillai S, Christie SD, Tokarz D. Second harmonic generation microscopy of otoconia. Biomedical Optics Express. 13: 3593-3600. PMID 35781949 DOI: 10.1364/BOE.457967  0.732
2020 Peacock C, Lee E, Beral T, Cisek R, Tokarz D, Kreplak L. Buckling and Torsional Instabilities of a Nanoscale Biological Rope Bound to an Elastic Substrate. Acs Nano. PMID 32966048 DOI: 10.1021/acsnano.0c03695  0.685
2020 Tokarz D, Cisek R, Joseph A, Asa SL, Wilson BC, Barzda V. Characterization of pathological thyroid tissue using polarization-sensitive second harmonic generation microscopy. Laboratory Investigation; a Journal of Technical Methods and Pathology. PMID 32737408 DOI: 10.1038/S41374-020-0475-7  0.782
2019 Zhao H, Cisek R, Karunendiran A, Tokarz D, Stewart BA, Barzda V. Live imaging of contracting muscles with wide-field second harmonic generation microscopy using a high power laser. Biomedical Optics Express. 10: 5130-5135. PMID 31646035 DOI: 10.1364/Boe.10.005130  0.802
2019 Tokarz D, Cisek R, Joseph A, Golaraei A, Mirsanaye K, Krouglov S, Asa SL, Wilson BC, Barzda V. Characterization of Pancreatic Cancer Tissue Using Multiphoton Excitation Fluorescence and Polarization-Sensitive Harmonic Generation Microscopy. Frontiers in Oncology. 9: 272. PMID 31058080 DOI: 10.3389/Fonc.2019.00272  0.804
2019 Castano LJU, Mirsanaye K, Golaraei A, Kontenis L, Cisek R, Zhao H, Barzda V. Wide-field Polarimetric Second Harmonic Generation Microscopy of Biological Tissues Nonlinear Optics. DOI: 10.1364/Nlo.2019.Ntu4A.5  0.788
2017 Karunendiran A, Cisek R, Tokarz D, Barzda V, Stewart BA. Examination of Drosophila eye development with third harmonic generation microscopy. Biomedical Optics Express. 8: 4504-4513. PMID 29082080 DOI: 10.1364/Boe.8.004504  0.774
2017 Tokarz D, Cisek R, Wein MN, Turcotte R, Haase C, Yeh SA, Bharadwaj S, Raphael AP, Paudel H, Alt C, Liu TM, Kronenberg HM, Lin CP. Intravital imaging of osteocytes in mouse calvaria using third harmonic generation microscopy. Plos One. 12: e0186846. PMID 29065178 DOI: 10.1371/Journal.Pone.0186846  0.726
2017 Cisek R, Tokarz D, Kontenis L, Barzda V, Steup M. Polarimetric second harmonic generation microscopy: An analytical tool for starch bioengineering Starch - StäRke. 70: 1700031. DOI: 10.1002/Star.201700031  0.823
2016 Golaraei A, Kontenis L, Cisek R, Tokarz D, Done SJ, Wilson BC, Barzda V. Changes of collagen ultrastructure in breast cancer tissue determined by second-harmonic generation double Stokes-Mueller polarimetric microscopy. Biomedical Optics Express. 7: 4054-4068. PMID 27867715 DOI: 10.1364/Boe.7.004054  0.791
2015 Cisek R, Tokarz D, Steup M, Tetlow IJ, Emes MJ, Hebelstrup KH, Blennow A, Barzda V. Second harmonic generation microscopy investigation of the crystalline ultrastructure of three barley starch lines affected by hydration. Biomedical Optics Express. 6: 3694-700. PMID 26504621 DOI: 10.1364/Boe.6.003694  0.791
2015 Cui L, Tokarz D, Cisek R, Ng KK, Wang F, Chen J, Barzda V, Zheng G. Organized Aggregation of Porphyrins in Lipid Bilayer for Third Harmonic Generation Microscopy. Angewandte Chemie (International Ed. in English). PMID 26418395 DOI: 10.1002/Anie.201506171  0.816
2015 Tokarz D, Cisek R, Golaraei A, Asa SL, Barzda V, Wilson BC. Ultrastructural features of collagen in thyroid carcinoma tissue observed by polarization second harmonic generation microscopy. Biomedical Optics Express. 6: 3475-81. PMID 26417516 DOI: 10.1364/Boe.6.003475  0.808
2015 Tokarz D, Cisek R, Krouglov S, Kontenis L, Fekl U, Barzda V. Correction to "Molecular organization of crystalline β-carotene in carrots determined with polarization-dependent second and third harmonic generation microscopy". The Journal of Physical Chemistry. B. 119: 3619. PMID 25668595 DOI: 10.1021/Acs.Jpcb.5B00945  0.801
2015 Samim M, Krouglov S, Cisek R, Tokarz D, Golaraei A, Kontenis L, Barzda V. Nonlinear stokes mueller polarimetric microscopy Novel Techniques in Microscopy, Ntm 2015. DOI: 10.1364/Ntm.2015.Nt4C.1  0.803
2015 Tokarz D, Cisek R, Golaraei A, Krouglov S, Navab R, Niu C, Sakashita S, Yasufuku K, Tsao MS, Asa SL, Barzda V, Wilson BC. Tumor tissue characterization using polarization-sensitive second harmonic generation microscopy Progress in Biomedical Optics and Imaging - Proceedings of Spie. 9531. DOI: 10.1117/12.2180969  0.807
2015 Barzda V, Prent N, Samim M, Wegener S, Cisek R. Synchronization Model of Sarcomeres in Contracting Cardiomyocytes Biophysical Journal. 108: 294a. DOI: 10.1016/J.Bpj.2014.11.1602  0.777
2015 Golaraei A, Tokarz D, Cisek R, Krouglov S, Navab R, Niu C, Sakashita S, Yasufuku K, Tsao MS, Asa S, Wilson BC, Barzda V. Characterization of collagen in human pancreas, breast and lung with polarization resolved second harmonic generation microscopy Optical Trapping Applications, Ota 2015.  0.793
2015 Golaraei A, Tokarz D, Cisek R, Krouglov S, Navab R, Niu C, Sakashita S, Yasufuku K, Tsao MS, Asa S, Wilson BC, Barzda V. Characterization of collagen in human pancreas, breast and lung with polarization resolved second harmonic generation microscopy Optical Trapping Applications, Ota 2015.  0.581
2014 Cisek R, Tokarz D, Hirmiz N, Saxena A, Shik A, Ruda HE, Barzda V. Crystal lattice determination of ZnSe nanowires with polarization-dependent second harmonic generation microscopy. Nanotechnology. 25: 505703. PMID 25431947 DOI: 10.1088/0957-4484/25/50/505703  0.789
2014 Cisek R, Tokarz D, Krouglov S, Steup M, Emes MJ, Tetlow IJ, Barzda V. Second Harmonic Generation Mediated by Aligned Water in Starch Granules. The Journal of Physical Chemistry. B. 118: 14785-94. PMID 25427055 DOI: 10.1021/Jp508751S  0.793
2014 Golaraei A, Cisek R, Krouglov S, Navab R, Niu C, Sakashita S, Yasufuku K, Tsao MS, Wilson BC, Barzda V. Characterization of collagen in non-small cell lung carcinoma with second harmonic polarization microscopy. Biomedical Optics Express. 5: 3562-7. PMID 25360372 DOI: 10.1364/Boe.5.003562  0.8
2014 Tokarz D, Cisek R, El-Ansari O, Espie GS, Fekl U, Barzda V. Organization of astaxanthin within oil bodies of Haematococcus pluvialis studied with polarization-dependent harmonic generation microscopy. Plos One. 9: e107804. PMID 25215522 DOI: 10.1371/Journal.Pone.0107804  0.789
2014 Tokarz D, Cisek R, Krouglov S, Kontenis L, Fekl U, Barzda V. Molecular organization of crystalline β-carotene in carrots determined with polarization-dependent second and third harmonic generation microscopy. The Journal of Physical Chemistry. B. 118: 3814-22. PMID 24628541 DOI: 10.1021/jp411387p  0.802
2014 Prent N, Tuer A, Cisek R, Samim M, Krouglov S, Barzda V. Polarisation-in polarisation-out second-harmonic generation microscopy in birefringent biological structures Proceedings of the International School of Physics "Enrico Fermi". 181: 177-182. DOI: 10.3254/978-1-61499-413-8-177  0.816
2014 Golaraei A, Cisek R, Navab R, Niu C, Yasufuku K, Tsao M, Wilson B, Barzda V. Structure of Collagen in Lung Carcinoma Tissue Characterized with Harmonic Polarization Microscopy Ieee Transactions On Biomedical Engineering. DOI: 10.1364/Biomed.2014.Bt3A.12  0.812
2013 Samim M, Sandkuijl D, Tretyakov I, Cisek R, Barzda V. Differential polarization nonlinear optical microscopy with adaptive optics controlled multiplexed beams. International Journal of Molecular Sciences. 14: 18520-34. PMID 24022688 DOI: 10.3390/Ijms140918520  0.824
2013 Tokarz D, Cisek R, Fekl U, Barzda V. The molecular second hyperpolarizability of the light-harvesting chlorophyll a/b pigment-protein complex of photosystem II. The Journal of Physical Chemistry. B. 117: 11069-75. PMID 23731089 DOI: 10.1021/Jp400739V  0.771
2012 Tokarz D, Cisek R, Prent N, Fekl U, Barzda V. Measuring the molecular second hyperpolarizability in absorptive solutions by the third harmonic generation ratio technique. Analytica Chimica Acta. 755: 86-92. PMID 23146398 DOI: 10.1016/J.Aca.2012.09.049  0.787
2012 Tokarz D, Cisek R, Garbaczewska M, Sandkuijl D, Qiu X, Stewart B, Levine JD, Fekl U, Barzda V. Carotenoid based bio-compatible labels for third harmonic generation microscopy. Physical Chemistry Chemical Physics : Pccp. 14: 10653-61. PMID 22744726 DOI: 10.1039/C2Cp41583F  0.813
2011 Tuer AE, Krouglov S, Prent N, Cisek R, Sandkuijl D, Yasufuku K, Wilson BC, Barzda V. Nonlinear optical properties of type I collagen fibers studied by polarization dependent second harmonic generation microscopy. The Journal of Physical Chemistry. B. 115: 12759-69. PMID 21970315 DOI: 10.1021/Jp206308K  0.791
2011 Tuer A, Krouglov S, Cisek R, Tokarz D, Barzda V. Three-dimensional visualization of the first hyperpolarizability tensor. Journal of Computational Chemistry. 32: 1128-34. PMID 21387339 DOI: 10.1002/Jcc.21694  0.784
2011 Tuer A, Prent N, Cisek R, Sandkuijl D, Wilson B, Barzda V. Second-order nonlinear optical properties of fibrillar proteins Optics Infobase Conference Papers. DOI: 10.1364/Nlo.2011.Nwe5  0.796
2011 Cisek R, Hirmiz N, Saxena A, Shik A, Ruda HE, Barzda V. Nonlinear Optical Properties of ZnSe Nanowires Investigated with SHG Polarization Microscopy Nonlinear Optics. DOI: 10.1364/Nlo.2011.Nthb5  0.638
2011 Samim M, Cisek R, Sandkuijl D, Tretyakov I, Siu S, Musikhin S, Barzda V. Three-dimensional data acquisition with aberrations correction for video-rate microscopy Progress in Biomedical Optics and Imaging - Proceedings of Spie. 7904. DOI: 10.1117/12.875907  0.792
2011 Cisek R, Barzda V, Ruda HE, Shik A. Nonlinear optical properties of semiconductor nanowires Ieee Journal On Selected Topics in Quantum Electronics. 17: 915-921. DOI: 10.1109/Jstqe.2010.2065796  0.667
2011 Cisek R, Hirmiz N, Saxena A, Shik A, Ruda HE, Barzda V. Nonlinear optical properties of ZnSe nanowires investigated with SHG polarization microscopy Optics Infobase Conference Papers.  0.616
2010 Sandkuijl D, Cisek R, Major A, Barzda V. Differential microscopy for fluorescence-detected nonlinear absorption linear anisotropy based on a staggered two-beam femtosecond Yb:KGW oscillator. Biomedical Optics Express. 1: 895-901. PMID 21258516 DOI: 10.1364/Boe.1.000895  0.813
2010 Tuer A, Tokarz D, Prent N, Cisek R, Alami J, Dumont DJ, Bakueva L, Rowlands J, Barzda V. Nonlinear multicontrast microscopy of hematoxylin-and-eosin-stained histological sections. Journal of Biomedical Optics. 15: 026018. PMID 20459263 DOI: 10.1117/1.3382908  0.802
2010 Tuer A, Cisek R, Alami J, Rowlands J, Barzda V. Multicontrast Nonlinear Microscopy for Cancer Diagnostics using H&E Stained Thick Histological Sections Ieee Transactions On Biomedical Engineering. DOI: 10.1364/Biomed.2010.Bsud102  0.787
2010 Tokarz D, Tuer A, Cisek R, Krouglov S, Barzda V. Ab initio calculations of the linear and nonlinear optical properties of amino acids Journal of Physics: Conference Series. 256. DOI: 10.1088/1742-6596/256/1/012015  0.794
2009 Cisek R, Spencer L, Prent N, Zigmantas D, Espie GS, Barzda V. Optical microscopy in photosynthesis. Photosynthesis Research. 102: 111-41. PMID 19851883 DOI: 10.1007/S11120-009-9500-9  0.82
2009 Carriles R, Schafer DN, Sheetz KE, Field JJ, Cisek R, Barzda V, Sylvester AW, Squier JA. Invited review article: Imaging techniques for harmonic and multiphoton absorption fluorescence microscopy. The Review of Scientific Instruments. 80: 081101. PMID 19725639 DOI: 10.1063/1.3184828  0.663
2009 Spencer TL, Cisek R, Barzda V, Philipose U, Ruda HE, Shik A. Orientation dependent nonlinear optical effects in ZnSe nanowires Applied Physics Letters. 94. DOI: 10.1063/1.3155187  0.658
2009 Major A, Cisek R, Sandkuijl D, Barzda V. Femtosecond Yb:KGd(WO4)2 laser with > 100 nJ of pulse energy Laser Physics Letters. 6: 272-274. DOI: 10.1002/Lapl.200810127  0.776
2009 Sandkuijl D, Major A, Cisek R, Grang G, Mathur J, Stewart B, Barzda BV. A femtosecond Yb: KGd(WO4)2 laser for biological imaging of yellow fluorescent protein Optics Infobase Conference Papers.  0.743
2009 Prent N, Cisek R, Greenhalgh C, Major A, Stewart B, Barzda V. Real-time studies of muscle cell contractions with second harmonic generation microscopy Optics Infobase Conference Papers.  0.777
2009 Sandkuijl D, Major A, Cisek R, Grang G, Mathur J, Stewart B, Barzda V. A femtosecond Yb:KGd(WO4)2 laser for biological imaging of yellow fluorescent protein 2009 Conference On Lasers and Electro-Optics and 2009 Conference On Quantum Electronics and Laser Science Conference, Cleo/Qels 2009.  0.787
2009 Prent N, Cisek R, Greenhalgh C, Major A, Stewart B, Barzda V. Real-time studies of muscle cell contractions with second harmonic generation microscopy Optics Infobase Conference Papers.  0.79
2008 Prent N, Green C, Greenhalgh C, Cisek R, Major A, Stewart B, Barzda V. Intermyofilament dynamics of myocytes revealed by second harmonic generation microscopy. Journal of Biomedical Optics. 13: 041318. PMID 19021326 DOI: 10.1117/1.2950316  0.796
2008 Major A, Cisek R, Tuer A, Prent N, Barzda V. Ultrafast Yb:KGd(WO4)2 laser for multimodal biomedical imaging with reduced photodamage Proceedings of Spie - the International Society For Optical Engineering. 6881. DOI: 10.1117/12.763953  0.776
2008 Tuer A, Bakueva L, Cisek R, Alami J, Dumont DJ, Rowlands J, Barzda V. Enhancement of third harmonic contrast with harmonophores in multimodal non-linear microscopy of histological sections Progress in Biomedical Optics and Imaging - Proceedings of Spie. 6860. DOI: 10.1117/12.763509  0.818
2008 Barzda V, Cisek R, Spencer TL, Philipose U, Ruda HE, Shik A. Giant anisotropy of second harmonic generation for a single ZnSe nanowire Applied Physics Letters. 92. DOI: 10.1063/1.2901023  0.641
2007 Greenhalgh C, Prent N, Green C, Cisek R, Major A, Stewart B, Barzda V. Influence of semicrystalline order on the second-harmonic generation efficiency in the anisotropic bands of myocytes. Applied Optics. 46: 1852-9. PMID 17356630 DOI: 10.1364/Ao.46.001852  0.784
2006 Major A, Cisek R, Barzda V. Femtosecond Yb:KGd(WO(4))(2) laser oscillator pumped by a high power fiber-coupled diode laser module. Optics Express. 14: 12163-8. PMID 19529643 DOI: 10.1364/Oe.14.012163  0.738
2006 Major A, Cisek R, Barzda V. Femtosecond Yb:KGd(WO4)2 laser oscillator pumped by a high power fiber-coupled diode laser module Optics Express. 14: 12163-12168. DOI: 10.1364/OE.14.012163  0.725
2006 Greenhalgh C, Cisek R, Barzda V, Stewart B. Dynamic and structural visualization of muscle structure in drosophila with multimodal harmonic generation microscopy Optics Infobase Conference Papers. DOI: 10.1364/Bio.2006.Wf6  0.791
2006 Major A, Cisek R, Greenhalgh C, Prent N, Stewart B, Barzda V. A diode-pumped high power extended cavity femtosecond Yb:KGW laser: From development to applications in nonlinear microscopy Proceedings of Spie - the International Society For Optical Engineering. 6343. DOI: 10.1117/12.707936  0.783
2006 Greenhalgh C, Stewart B, Cisek R, Prent N, Major A, Barzda V. Dynamic investigation of drosophila myocytes with second harmonic generation microscopy Proceedings of Spie - the International Society For Optical Engineering. 6343. DOI: 10.1117/12.706559  0.797
2006 Cisek R, Major A, Prent N, Greenhalgh C, Barzda V. Optimization of nonlinear excitation for reducing light-induced changes in photosynthetic systems during imaging with multimodal microscopy Proceedings of Spie - the International Society For Optical Engineering. 6343. DOI: 10.1117/12.706555  0.781
2006 Major A, Cisek R, Barzda V. Development of diode-pumped high average power continuous-wave and ultrashort pulse Yb:KGW lasers for nonlinear microscopy Proceedings of Spie - the International Society For Optical Engineering. 6108. DOI: 10.1117/12.641414  0.753
2006 Major A, Cisek R, Barzda I. Diode-pumped high power continuous-wave Yb:KGW Laser Conference On Lasers and Electro-Optics and 2006 Quantum Electronics and Laser Science Conference, Cleo/Qels 2006. DOI: 10.1109/CLEO.2006.4627984  0.598
2006 Major A, Cisek R, Barzda V. High pulse energy femtosecond Yb:KGW laser Conference On Lasers and Electro-Optics and 2006 Quantum Electronics and Laser Science Conference, Cleo/Qels 2006. DOI: 10.1109/CLEO.2006.4627738  0.72
2005 Prent N, Cisek R, Greenhalgh C, Sparrow R, Rohitlall N, Milkereit MS, Green C, Barzda V. Applications of nonlinear microscopy for studying the structure and dynamics in biological systems Proceedings of Spie - the International Society For Optical Engineering. 5971. DOI: 10.1117/12.628801  0.786
2005 Greenhalgh C, Cisek R, Prent N, Major A, De Au JA, Squier J, Barzda V. Time and structural crosscorrelation image analysis of microscopic volumes, simultaneously recorded with second harmonic generation, third harmonic generation, and multiphoton excitation fluorescence microscopy Progress in Biomedical Optics and Imaging - Proceedings of Spie. 5969. DOI: 10.1117/12.628786  0.808
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