Yangsook S. Green, Ph.D. - Related publications

2010 Neurobiology and Anatomy University of Utah, Salt Lake City, UT 
Human Development, Neuroscience Biology, Molecular Biology, Cell Biology
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Tooley JG, Catlin JP, Schaner Tooley CE. CREB-mediated transcriptional activation of NRMT1 drives muscle differentiation. Transcription. 1-17. PMID 34403304 DOI: 10.1080/21541264.2021.1963627   
2021 Goszczynski DE, Tinetti PS, Choi YH, Hinrichs K, Ross PJ. Genome activation in equine in vitro-produced embryos. Biology of Reproduction. PMID 34515744 DOI: 10.1093/biolre/ioab173   
2021 Viswanathan R, Hartmann J, Pallares Cartes C, De Renzis S. Desensitisation of Notch signalling through dynamic adaptation in the nucleus. The Embo Journal. 40: e107245. PMID 34396565 DOI: 10.15252/embj.2020107245   
2021 Meurer L, Ferdman L, Belcher B, Camarata T. The SIX Family of Transcription Factors: Common Themes Integrating Developmental and Cancer Biology. Frontiers in Cell and Developmental Biology. 9: 707854. PMID 34490256 DOI: 10.3389/fcell.2021.707854   
2021 Singh NP. Gene regulation: Context is everything. Current Biology : Cb. 31: R1115-R1117. PMID 34637709 DOI: 10.1016/j.cub.2021.08.064   
2021 Meléndez-Ramírez C, Cuevas-Diaz Duran R, Barrios-García T, Giacoman-Lozano M, López-Ornelas A, Herrera-Gamboa J, Estudillo E, Soto-Reyes E, Velasco I, Treviño V. Dynamic landscape of chromatin accessibility and transcriptomic changes during differentiation of human embryonic stem cells into dopaminergic neurons. Scientific Reports. 11: 16977. PMID 34417498 DOI: 10.1038/s41598-021-96263-1   
2021 Yoon JH, Cho YS, Lee HB, Park JY, Lim HK. () Gene Cloning and Gonad-Specific Expression Pattern in Starry Flounder (). Animals : An Open Access Journal From Mdpi. 11. PMID 34438719 DOI: 10.3390/ani11082256   
2021 Payankaulam S, Hickey SL, Arnosti DN. Cell cycle expression of polarity genes features Rb targeting of Vang. Cells & Development. 169: 203747. PMID 34583062 DOI: 10.1016/j.cdev.2021.203747   
2021 Yin X, Wu Y, Zhang S, Zhang T, Zhang G, Wang J. Transcriptomic profile of leg muscle during early growth and development in Haiyang yellow chicken. Archives Animal Breeding. 64: 405-416. PMID 34584942 DOI: 10.5194/aab-64-405-2021   
2021 Stec N, Doerfel K, Hills-Muckey K, Ettorre VM, Ercan S, Keil W, Hammell CM. An Epigenetic Priming Mechanism Mediated by Nutrient Sensing Regulates Transcriptional Output during C. elegans Development. Current Biology : Cb. 31: 809-826.e6. PMID 33357451 DOI: 10.1016/j.cub.2020.11.060   
2021 Yang J, Li Q, Du W, Yao Y, Shen G, Jiang W, Pang Y. Genome-Wide Analysis of Glycoside Hydrolase Family 35 Genes and Their Potential Roles in Cell Wall Development in . Plants (Basel, Switzerland). 10. PMID 34451684 DOI: 10.3390/plants10081639   
2021 Nair VD, Vasoya M, Nair V, Smith GR, Pincas H, Ge Y, Douglas CM, Esser KA, Sealfon SC. Differential analysis of chromatin accessibility and gene expression profiles identifies cis-regulatory elements in rat adipose and muscle. Genomics. 113: 3827-3841. PMID 34547403 DOI: 10.1016/j.ygeno.2021.09.013   
2021 Shen H, Guo YL, Li GH, Zhao W, Zhang L. Gene Expression Analysis Reveals Key Genes and Signalings Associated with the Prognosis of Prostate Cancer. Computational and Mathematical Methods in Medicine. 2021: 9946015. PMID 34497666 DOI: 10.1155/2021/9946015   
2021 Weidemüller P, Kholmatov M, Petsalaki E, Zaugg JB. Transcription factors: Bridge between cell signaling and gene regulation. Proteomics. e2000034. PMID 34314098 DOI: 10.1002/pmic.202000034   
2021 Galfrè SG, Morandin F, Pietrosanto M, Cremisi F, Helmer-Citterich M. COTAN: scRNA-seq data analysis based on gene co-expression. Nar Genomics and Bioinformatics. 3: lqab072. PMID 34396096 DOI: 10.1093/nargab/lqab072   
2021 Dai Z, Li R, Hou Y, Li Q, Zhao K, Li T, Li MJ, Wu X. Inducible CRISPRa screen identifies putative enhancers. Journal of Genetics and Genomics = Yi Chuan Xue Bao. PMID 34531148 DOI: 10.1016/j.jgg.2021.06.012   
2021 Metasuk A, Kitiyanant N, Chetsawang B. An expression system of channelrhodopsin-2 driven by a minimal Arc/Arg3.1 promoter and Tet system was developed in human neuroblastoma cells. Plasmid. 117: 102597. PMID 34411655 DOI: 10.1016/j.plasmid.2021.102597   
2021 Gandhi S, Li Y, Tang W, Christensen JB, Urrutia HA, Vieceli FM, Piacentino ML, Bronner ME. A single-plasmid approach for genome editing coupled with long-term lineage analysis in chick embryos. Development (Cambridge, England). 148. PMID 34437692 DOI: 10.1242/dev.193565   
2021 LaBelle J, Woo S. Light-Induced GFP Expression in Zebrafish Embryos using the Optogenetic TAEL/C120 System. Journal of Visualized Experiments : Jove. PMID 34487118 DOI: 10.3791/62818   
2021 Kumar S, Ruggles A, Logan S, Mazarakis A, Tyson T, Bates M, Grosse C, Reed D, Li Z, Grimwood J, Schmutz J, Saski C. Comparative Transcriptomics of Non-Embryogenic and Embryogenic Callus in Semi-Recalcitrant and Non-Recalcitrant Upland Cotton Lines. Plants (Basel, Switzerland). 10. PMID 34579308 DOI: 10.3390/plants10091775   
2021 Meiler A, Marchiano F, Haering M, Weitkunat M, Schnorrer F, Habermann BH. AnnoMiner is a new web-tool to integrate epigenetics, transcription factor occupancy and transcriptomics data to predict transcriptional regulators. Scientific Reports. 11: 15463. PMID 34326396 DOI: 10.1038/s41598-021-94805-1   
2021 Ding H, Lin Y, Zhang T, Chen L, Zhang G, Wang J, Xie K, Dai G. Transcriptome Analysis of Differentially Expressed mRNA Related to Pigeon Muscle Development. Animals : An Open Access Journal From Mdpi. 11. PMID 34438768 DOI: 10.3390/ani11082311   
2021 Rehnitz J, Capp E, Messmer B, Nguyen XP, Germeyer A, Freis A, Dietrich JE, Hinderhofer K, Strowitzki T, Vogt PH. and AKT/mTOR Signaling in Human Granulosa Cells: Functional Interaction and Impact on Ovarian Response. Journal of Clinical Medicine. 10. PMID 34501340 DOI: 10.3390/jcm10173892   
2021 Li J, Chen Y, Tiwari M, Bansal V, Sen GL. Regulation of integrin and extracellular matrix genes by HNRNPL is necessary for epidermal renewal. Plos Biology. 19: e3001378. PMID 34543262 DOI: 10.1371/journal.pbio.3001378   
2021 Ubina T, Vahedi-Hunter T, Agnew-Svoboda W, Wong W, Gupta A, Santhakumar V, Riccomagno MM. ExBoX: a simple Boolean exclusion strategy to drive expression in neurons. Journal of Cell Science. PMID 34515305 DOI: 10.1242/jcs.257212   
2021 Marion-Poll L, Forêt B, Zielinski D, Massip F, Attia M, Carter AC, Syx L, Chang HY, Gendrel AV, Heard E. Locus specific epigenetic modalities of random allelic expression imbalance. Nature Communications. 12: 5330. PMID 34504093 DOI: 10.1038/s41467-021-25630-3   
2021 Fang L, Kong X, Wen Y, Li J, Yin Y, Li L, Ma G, Wu K, Zeng S. Characterization of embryo and protocorm development of Paphiopedilum spicerianum. Plant Physiology and Biochemistry : Ppb. 167: 1024-1034. PMID 34598022 DOI: 10.1016/j.plaphy.2021.09.001   
2021 Zhao Z, Fu Q, Hu L, Liu Y. Identification of the Crucial Gene in Overflow Arteriovenous Fistula by Bioinformatics Analysis. Frontiers in Physiology. 12: 621830. PMID 34421628 DOI: 10.3389/fphys.2021.621830   
2021 Liao KA, Rangarajan KV, Bai X, Taylor JM, Mack CP. The actin depolymerizing factor, Destrin, serves as a negative feedback inhibitor of smooth muscle cell differentiation. American Journal of Physiology. Heart and Circulatory Physiology. PMID 34559579 DOI: 10.1152/ajpheart.00142.2021   
2021 Liang Y, Wang M, Liu Y, Wang C, Takahashi K, Naruse K. Meta-Analysis-Assisted Detection of Gravity-Sensitive Genes in Human Vascular Endothelial Cells. Frontiers in Cell and Developmental Biology. 9: 689662. PMID 34422812 DOI: 10.3389/fcell.2021.689662   
2021 Kotarba G, Taracha-Wisniewska A, Miller M, Dabrowski M, Wilanowski T. Transcription factors Krüppel-like factor 4 and paired box 5 regulate the expression of the Grainyhead-like genes. Plos One. 16: e0257977. PMID 34570823 DOI: 10.1371/journal.pone.0257977   
2021 Hajirnis N, Mishra RK. Homeotic Genes: Clustering, Modularity, and Diversity. Frontiers in Cell and Developmental Biology. 9: 718308. PMID 34458272 DOI: 10.3389/fcell.2021.718308   
2021 Mariani L, Guo X, Menezes NA, Drozd AM, Çakal SD, Wang Q, Ferretti E. A TALE/HOX code unlocks WNT signalling response towards paraxial mesoderm. Nature Communications. 12: 5136. PMID 34446717 DOI: 10.1038/s41467-021-25370-4   
2021 Xie CD, Wang B, Shen ZJ, Yao WY, Ao H, Li B, Pei Y, Zhou R. Validation of the Reference Genes for the Gene Expression Studies in Different Cell Lines of Pig. Biomed Research International. 2021: 5364190. PMID 34458368 DOI: 10.1155/2021/5364190   
2021 Gaudet P, Logie C, Lovering RC, Kuiper M, Lægreid A, Thomas PD. Gene Ontology representation for transcription factor functions. Biochimica Et Biophysica Acta. Gene Regulatory Mechanisms. 194752. PMID 34461313 DOI: 10.1016/j.bbagrm.2021.194752   
2021 Presnell JS, Browne WE. Krüppel-like factor gene function in the ctenophore Mnemiopsis leidyi assessed by CRISPR/Cas9-mediated genome editing. Development (Cambridge, England). PMID 34373891 DOI: 10.1242/dev.199771   
2021 Zhang J, Le Gras S, Pouxvielh K, Faure F, Fallone L, Kern N, Moreews M, Mathieu AL, Schneider R, Marliac Q, Jung M, Berton A, Hayek S, Vidalain PO, Marçais A, et al. Sequential actions of EOMES and T-BET promote stepwise maturation of natural killer cells. Nature Communications. 12: 5446. PMID 34521844 DOI: 10.1038/s41467-021-25758-2   
2021 Channappa M, Sharma S, Kulshreshtha D, Singh K, Bhardwaj SC, Murugasamy S, Sindhu A, Vikas VK, Aggarwal R. Transcriptome profiling and differential gene expression analysis provides insights into 24-based resistance in wheat against . 3 Biotech. 11: 455. PMID 34631354 DOI: 10.1007/s13205-021-02972-9   
2021 Hobert O. Homeobox genes and the specification of neuronal identity. Nature Reviews. Neuroscience. PMID 34446866 DOI: 10.1038/s41583-021-00497-x   
2021 Shi K, Zhu X, Wu J, Chen Y, Zhang J, Sun X. Centromere protein E as a novel biomarker and potential therapeutic target for retinoblastoma. Bioengineered. 12: 5950-5970. PMID 34482803 DOI: 10.1080/21655979.2021.1972080   
2021 Vetrici MA, Yevtushenko DP, Misra S. Douglas-fir () is an active transcription factor during zygotic and somatic embryogenesis. Plant Direct. 5: e00333. PMID 34355111 DOI: 10.1002/pld3.333   
2021 Yan F, Wang J, Wu X, Lu XT, Wang Y, Cheng W, Cui XP, Jiang F, Guo XS. Nitrosative stress induces downregulation of ribosomal protein genes via MYCT1 in vascular smooth muscle cells. European Review For Medical and Pharmacological Sciences. 25: 5653-5663. PMID 34604957 DOI: 10.26355/eurrev_202109_26784   
2021 Da Rocha M, Bournaud C, Dazenière J, Thorpe P, Bailly-Bechet M, Pellegrin C, Péré A, Grynberg P, Perfus-Barbeoch L, Eves-van den Akker S, Danchin EGJ. Genome Expression Dynamics Reveal the Parasitism Regulatory Landscape of the Root-Knot Nematode and a Promoter Motif Associated with Effector Genes. Genes. 12. PMID 34070210 DOI: 10.3390/genes12050771   
2021 Liu Y, Cui S, Sun J, Yan X, Han D. Identification of Potential Biomarkers for Psoriasis by DNA Methylation and Gene Expression Datasets. Frontiers in Genetics. 12: 722803. PMID 34512732 DOI: 10.3389/fgene.2021.722803   
2021 Chung H, Parkhurst CN, Magee EM, Phillips D, Habibi E, Chen F, Yeung BZ, Waldman J, Artis D, Regev A. Joint single-cell measurements of nuclear proteins and RNA in vivo. Nature Methods. 18: 1204-1212. PMID 34608310 DOI: 10.1038/s41592-021-01278-1   
2021 Wen J, Song J, Bai Y, Liu Y, Cai X, Mei L, Ma L, He C, Feng Y. A Model of Waardenburg Syndrome Using Patient-Derived iPSCs With a Mutation Displays Compromised Maturation and Function of the Neural Crest That Involves Inner Ear Development. Frontiers in Cell and Developmental Biology. 9: 720858. PMID 34426786 DOI: 10.3389/fcell.2021.720858   
2021 Thomas AL, Marsman J, Antony J, Schierding W, O'Sullivan JM, Horsfield JA. Transcriptional Regulation of : An Informatics Analysis. Genes. 12. PMID 34440349 DOI: 10.3390/genes12081175   
2021 Zuo Z, Sun X, Cao L, Zhang S, Yu J, Xu X, Xu Z, Liu G, Qu C. Genome-wide identification of genes in and their expression under different nitrogen treatments. Physiology and Molecular Biology of Plants : An International Journal of Functional Plant Biology. 27: 1919-1931. PMID 34616114 DOI: 10.1007/s12298-021-01055-6   
2021 Sheng T, Ho SWT, Ooi WF, Xu C, Xing M, Padmanabhan N, Huang KK, Ma L, Ray M, Guo YA, Sim NL, Anene-Nzelu CG, Chang MM, Razavi-Mohseni M, Beer MA, et al. Integrative epigenomic and high-throughput functional enhancer profiling reveals determinants of enhancer heterogeneity in gastric cancer. Genome Medicine. 13: 158. PMID 34635154 DOI: 10.1186/s13073-021-00970-3   
2021 Wang L, Li JH, Huang HY, Wu Q. [Serial deletions of tandem reverse CTCF sites reveal balanced regulatory landscape of enhancers]. Yi Chuan = Hereditas. 43: 775-791. PMID 34413017 DOI: 10.16288/j.yczz.21-132