Anna Hei Chan, Ph.D. - Related publications

School of Biological Sciences Nanyang Technological University, Singapore, Singapore 
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50 most relevant papers in past 60 days:
Year Citation  Score
2019 Vafadar A, Shabaninejad Z, Movahedpour A, Mohammadi S, Fathullahzadeh S, Mirzaei HR, Namdar A, Savardashtaki A, Mirzaei H. Long Non-Coding RNAs: Epigenetic Regulators in Cancer. Current Pharmaceutical Design. PMID 31470781 DOI: 10.2174/1381612825666190830161528   
2019 Shuai S, Suzuki H, Diaz-Navarro A, Nadeu F, Kumar SA, Gutierrez-Fernandez A, Delgado J, Pinyol M, López-Otín C, Puente XS, Taylor MD, Campo E, Stein LD. The U1 spliceosomal RNA is recurrently mutated in multiple cancers. Nature. PMID 31597163 DOI: 10.1038/s41586-019-1651-z   
2019 Dvinge H, Guenthoer J, Porter PL, Bradley RK. RNA components of the spliceosome regulate tissue- and cancer-specific alternative splicing. Genome Research. PMID 31434678 DOI: 10.1101/gr.246678.118   
2019 Thomas HB, O'Keefe RT. Advanced Methods for the Analysis of Altered Pre-mRNA Splicing in Yeast and Disease. Methods in Molecular Biology (Clifton, N.J.). 2049: 131-140. PMID 31602609 DOI: 10.1007/978-1-4939-9736-7_8   
2019 Zaccara S, Ries RJ, Jaffrey SR. Reading, writing and erasing mRNA methylation. Nature Reviews. Molecular Cell Biology. PMID 31520073 DOI: 10.1038/s41580-019-0168-5   
2019 Idris M, Harmston N, Petretto EG, Madan B, Virshup DM. Broad regulation of gene isoform expression by Wnt signaling in cancer. Rna (New York, N.Y.). PMID 31506381 DOI: 10.1261/rna.071506.119   
2019 Tuladhar R, Yeu Y, Tyler Piazza J, Tan Z, Rene Clemenceau J, Wu X, Barrett Q, Herbert J, Mathews DH, Kim J, Hyun Hwang T, Lum L. CRISPR-Cas9-based mutagenesis frequently provokes on-target mRNA misregulation. Nature Communications. 10: 4056. PMID 31492834 DOI: 10.1038/s41467-019-12028-5   
2019 Loh XY, Sun QY, Ding LW, Mayakonda A, Venkatachalam N, Yeo MS, Silva TC, Xiao JF, B Doan N, W Said J, Ran XB, Zhou SQ, Dakle P, Shyamsunder P, Koh AP, et al. RNA-binding protein ZFP36L1 suppresses hypoxia and cell cycle signaling. Cancer Research. PMID 31551365 DOI: 10.1158/0008-5472.CAN-18-2796   
2019 Licht K, Kapoor U, Amman F, Picardi E, Martin D, Bajad P, Jantsch MF. A high resolution A-to-I editing map in the mouse identifies editing events controlled by pre-mRNA splicing. Genome Research. PMID 31427386 DOI: 10.1101/gr.242636.118   
2019 Zheng H, Chen S, Wang X, Xie J, Tian J, Wang F. An intron retained bioluminescence reporter for real-time imaging of pre-mRNA splicing in living subjects. Analytical Chemistry. PMID 31476865 DOI: 10.1021/acs.analchem.9b02935   
2019 Harris C, Xu W, Grassi L, Wang C, Markle A, Hardman C, Stevens R, Miro-Quesada G, Hatton D, Wang J. Identification and characterization of an IgG sequence variant with an 11 kDa heavy chain C-terminal extension using a combination of mass spectrometry and high-throughput sequencing analysis. Mabs. 1-12. PMID 31570042 DOI: 10.1080/19420862.2019.1667740   
2019 Gallegos JE, Rose AB. An intron-derived motif strongly increases gene expression from transcribed sequences through a splicing independent mechanism in Arabidopsis thaliana. Scientific Reports. 9: 13777. PMID 31551463 DOI: 10.1038/s41598-019-50389-5   
2019 Keiper S, Papasaikas P, Will CL, Valcárcel J, Girard C, Lührmann R. Smu1 and RED are required for activation of spliceosomal B complexes assembled on short introns. Nature Communications. 10: 3639. PMID 31409787 DOI: 10.1038/s41467-019-11293-8   
2019 Lee Y, Baumhardt JM, Pei J, Chook YM, Grishin NV. pCRM1exportome: database of predicted CRM1-dependent Nuclear Export Signal (NES) motifs in cancer-related genes. Bioinformatics (Oxford, England). PMID 31504173 DOI: 10.1093/bioinformatics/btz657   
2019 Desterro J, Bak-Gordon P, Carmo-Fonseca M. Targeting mRNA processing as an anticancer strategy. Nature Reviews. Drug Discovery. PMID 31554928 DOI: 10.1038/s41573-019-0042-3   
2019 Azzi-Martin L, He W, Péré-Védrenne C, Korolik V, Alix C, Prochazkova-Carlotti M, Morel JL, Le Roux-Goglin E, Lehours P, Djavaheri-Mergny M, Grosset CF, Varon C, Dubus P, Ménard A. Cytolethal distending toxin induces the formation of transient messenger-rich ribonucleoprotein nuclear invaginations in surviving cells. Plos Pathogens. 15: e1007921. PMID 31568537 DOI: 10.1371/journal.ppat.1007921   
2019 Kimball C, Powers K, Dustin J, Poirier V, Pellettieri J. The exon junction complex is required for stem and progenitor cell maintenance in planarians. Developmental Biology. PMID 31557470 DOI: 10.1016/j.ydbio.2019.09.010   
2019 Hu Y, Mohassel P, Donkervoort S, Yun P, Bolduc V, Ezzo D, Dastgir J, Marshall JL, Lek M, MacArthur DG, Reghan Foley A, Bönnemann CG. Identification of a Novel Deep Intronic Mutation in CAPN3 Presenting a Promising Target for Therapeutic Splice Modulation. Journal of Neuromuscular Diseases. PMID 31498126 DOI: 10.3233/JND-190414   
2019 Suzuki H, Kumar SA, Shuai S, Diaz-Navarro A, Gutierrez-Fernandez A, De Antonellis P, Cavalli FMG, Juraschka K, Farooq H, Shibahara I, Vladoiu MC, Zhang J, Abeysundara N, Przelicki D, Skowron P, et al. Recurrent non-coding U1-snRNA mutations drive cryptic splicing in Shh medulloblastoma. Nature. PMID 31597162 DOI: 10.1038/s41586-019-1650-0   
2019 Stevens M, Star E, Lee M, Innes E, Li L, Bowler E, Harper S, Bates DO, Oltean S. The VEGF-A exon 8 splicing-sensitive fluorescent reporter mouse is a novel tool to assess the effects of splicing regulatory compounds . Rna Biology. 1-10. PMID 31432737 DOI: 10.1080/15476286.2019.1652522   
2019 Xie Y, Ren Y. Mechanisms of nuclear mRNA export: A structural perspective. Traffic (Copenhagen, Denmark). PMID 31513326 DOI: 10.1111/tra.12691   
2019 Deng H, Zhang W, Li J, Li J, Hu L, Yan W, Liu S, He J, Weng S. A signal transducers and activators of transcription (STAT) gene from Scylla paramamosain is involved in resistance against mud crab reovirus. Fish & Shellfish Immunology. PMID 31539571 DOI: 10.1016/j.fsi.2019.09.045   
2019 Li Y, Jin S, Zhao X, Luo H, Li R, Li D, Xiao T. Sequence and expression analysis of the cytoplasmic pattern recognition receptor melanoma differentiation-associated gene 5 from the barbel chub Squaliobarbus curriculus. Fish & Shellfish Immunology. PMID 31494278 DOI: 10.1016/j.fsi.2019.08.077   
2019 Olthof AM, Hyatt KC, Kanadia RN. Minor intron splicing revisited: identification of new minor intron-containing genes and tissue-dependent retention and alternative splicing of minor introns. Bmc Genomics. 20: 686. PMID 31470809 DOI: 10.1186/s12864-019-6046-x   
2019 Malbec L, Zhang T, Chen YS, Zhang Y, Sun BF, Shi BY, Zhao YL, Yang Y, Yang YG. Dynamic methylome of internal mRNA N-methylguanosine and its regulatory role in translation. Cell Research. PMID 31520064 DOI: 10.1038/s41422-019-0230-z   
2019 Li X, Liu S, Zhang L, Issaian A, Hill RC, Espinosa S, Shi S, Cui Y, Kappel K, Das R, Hansen KC, Zhou ZH, Zhao R. A unified mechanism for intron and exon definition and back-splicing. Nature. PMID 31485080 DOI: 10.1038/s41586-019-1523-6   
2019 Narula A, Ellis J, Taliaferro JM, Rissland OS. Coding regions affect mRNA stability in human cells. Rna (New York, N.Y.). PMID 31527111 DOI: 10.1261/rna.073239.119   
2019 Bryen SJ, Joshi H, Evesson FJ, Girard C, Ghaoui R, Waddell LB, Testa AC, Cummings B, Arbuckle S, Graf N, Webster R, MacArthur DG, Laing NG, Davis MR, Lührmann R, et al. Pathogenic Abnormal Splicing due to Intronic Deletions that Induce Biophysical Space Constraint for Spliceosome Assembly. American Journal of Human Genetics. PMID 31447096 DOI: 10.1016/j.ajhg.2019.07.013   
2019 Zhao J, Li Q, Li Y, He X, Zheng Q, Huang S. ASJA: A Program for Assembling Splice Junctions Analysis. Computational and Structural Biotechnology Journal. 17: 1143-1150. PMID 31462970 DOI: 10.1016/j.csbj.2019.08.001   
2019 Bogen O, Bender O, Alvarez P, Kern M, Tomiuk S, Hucho F, Levine J. [EXPRESS] Expression of a novel versican variant in dorsal root ganglia (DRG) from spared nerve injury (SNI) rats. Molecular Pain. 1744806919874557. PMID 31429356 DOI: 10.1177/1744806919874557   
2019 Movassat M, Forouzmand E, Reese F, Hertel KJ. Exon Size and Sequence Conservation Improves Identification of Splice Altering Nucleotides. Rna (New York, N.Y.). PMID 31554659 DOI: 10.1261/rna.070987.119   
2019 Chang HL, Lin JC. SRSF1 and RBM4 differentially modulate the oncogenic effect of HIF-1α in lung cancer cells through alternative splicing mechanism. Biochimica Et Biophysica Acta. Molecular Cell Research. 118550. PMID 31491447 DOI: 10.1016/j.bbamcr.2019.118550   
2019 Santos Pereira-Dutra F, Cancela M, Valandro Meneghetti B, Bunselmeyer Ferreira H, Mariante Monteiro K, Zaha A. Functional characterization of the translation initiation factor eIF4E of Echinococcus granulosus. Parasitology Research. PMID 31401657 DOI: 10.1007/s00436-019-06421-8   
2019 Qian J, Yang J, Liu X, Chen Z, Yan X, Gu H, Xue Q, Zhou X, Gai L, Lu P, Shi Y, Yao N. Analysis of lncRNA-mRNA networks after MEK1/2 inhibition based on WGCNA in pancreatic ductal adenocarcinoma. Journal of Cellular Physiology. PMID 31583713 DOI: 10.1002/jcp.29255   
2019 Luxton HJ, Simpson BS, Mills IG, Brindle NR, Ahmed Z, Stavrinides V, Heavey S, Stamm S, Whitaker HC. The Oncogene Metadherin Interacts with the Known Splicing Proteins YTHDC1, Sam68 and T-STAR and Plays a Novel Role in Alternative mRNA Splicing. Cancers. 11. PMID 31450747 DOI: 10.3390/cancers11091233   
2019 Boutin J, Lessard F, Tremblay MG, Moss T. The Short N-Terminal Repeats of Transcription Termination Factor 1 Contain Semi-Redundant Nucleolar Localization Signals and P19-ARF Tumor Suppressor Binding Sites. The Yale Journal of Biology and Medicine. 92: 385-396. PMID 31543703   
2019 Sun J, Bai J, Jiang T, Gao Y, Hua Y. Modulation of exon 3 splicing. Rna Biology. PMID 31441370 DOI: 10.1080/15476286.2019.1659080   
2019 Das A, Rout PK, Gorospe M, Panda AC. Rolling Circle cDNA Synthesis Uncovers Circular RNA Splice Variants. International Journal of Molecular Sciences. 20. PMID 31426285 DOI: 10.3390/ijms20163988   
2019 Zhao W, Dong M, Pan J, Wang Y, Zhou J, Ma J, Liu S. Circular RNAs: A novel target among non‑coding RNAs with potential roles in malignant tumors (Review). Molecular Medicine Reports. PMID 31485661 DOI: 10.3892/mmr.2019.10637   
2019 Liu X, Hu Z, Zhou J, Tian C, Tian G, He M, Gao L, Chen L, Li T, Peng H, Zhang W. Interior circular RNA. Rna Biology. PMID 31532701 DOI: 10.1080/15476286.2019.1669391   
2019 Inoue D, Chew GL, Liu B, Michel BC, Pangallo J, D'Avino AR, Hitchman T, North K, Lee SC, Bitner L, Block A, Moore AR, Yoshimi A, Escobar-Hoyos L, Cho H, et al. Spliceosomal disruption of the non-canonical BAF complex in cancer. Nature. PMID 31597964 DOI: 10.1038/s41586-019-1646-9   
2019 Ma FC, He RQ, Lin P, Zhong JC, Ma J, Yang H, Hu XH, Chen G. Profiling of prognostic alternative splicing in melanoma. Oncology Letters. 18: 1081-1088. PMID 31423168 DOI: 10.3892/ol.2019.10453   
2019 Jaiswal PK, Koul S, Palanisamy N, Koul HK. Eukaryotic Translation Initiation Factor 4 Gamma 1 (EIF4G1): a target for cancer therapeutic intervention? Cancer Cell International. 19: 224. PMID 31496918 DOI: 10.1186/s12935-019-0947-2   
2019 Dang W, Liu H, Fan J, Zhao C, Long Y, Tong C, Liu B. Monitoring VEGF mRNA and imaging in living cells in vitro using rGO-based dual fluorescent signal amplification platform. Talanta. 205: 120092. PMID 31450435 DOI: 10.1016/j.talanta.2019.06.092   
2019 Soulette CM, Oliverio O, Roy SW. On the function of trans-splicing: No evidence for widespread proteome diversification in trypanosomes. Genome Biology and Evolution. PMID 31599940 DOI: 10.1093/gbe/evz217   
2019 Zhou H, Song H, Wu Y, Liu X, Li J, Zhao H, Tang M, Ji X, Zhang L, Su Y, He Y, Feng K, Jiao Y, Xu H. Oxygen-induced circRNA profiles and coregulatory networks in a retinopathy of prematurity mouse model. Experimental and Therapeutic Medicine. 18: 2037-2050. PMID 31452702 DOI: 10.3892/etm.2019.7819   
2019 Reynolds DJ, Hertel KJ. Ultra-deep sequencing reveals pre-mRNA splicing as a sequence driven high-fidelity process. Plos One. 14: e0223132. PMID 31581208 DOI: 10.1371/journal.pone.0223132   
2019 Jodoin R, Carrier JC, Rivard N, Bisaillon M, Perreault JP. G-quadruplex located in the 5'UTR of the BAG-1 mRNA affects both its cap-dependent and cap-independent translation through global secondary structure maintenance. Nucleic Acids Research. PMID 31504805 DOI: 10.1093/nar/gkz777   
2019 Reddy K, Jenquin JR, McConnell OL, Cleary JD, Richardson JI, Pinto BS, Haerle MC, Delgado E, Planco L, Nakamori M, Wang ET, Berglund JA. A CTG repeat-selective chemical screen identifies microtubule inhibitors as selective modulators of toxic CUG RNA levels. Proceedings of the National Academy of Sciences of the United States of America. PMID 31570586 DOI: 10.1073/pnas.1901893116   
2019 Wang Z, Qiu H, He J, Liu L, Xue W, Fox A, Tickner J, Xu J. The emerging roles of hnRNPK. Journal of Cellular Physiology. PMID 31538344 DOI: 10.1002/jcp.29186