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Joseph O. Deasy, PhD - Publications

Affiliations: 
1995-1999 Radiation Oncology University of Louisville School of Medicine, Louisville, KY, United States 
 1999-2010 Radiation Oncology Washington University, Saint Louis, St. Louis, MO 
 2010- Medical Physics Memorial Sloan Kettering Cancer Center, Rockville Centre, NY, United States 
Area:
medical physics, statistical learning, bioinformatics, radiobiology
Website:
https://orcid.org/0000-0002-9437-266
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Year Citation  Score
2020 Lee S, Deasy JO, Oh JH, Di Meglio A, Dumas A, Menvielle G, Charles C, Boyault S, Rousseau M, Besse C, Thomas E, Boland A, Cottu P, Tredan O, Levy C, et al. Prediction of Breast Cancer Treatment-Induced Fatigue by Machine Learning Using Genome-Wide Association Data. Jnci Cancer Spectrum. 4: pkaa039. PMID 33490863 DOI: 10.1093/Jncics/Pkaa039  0.68
2020 Haq R, Hotca A, Apte A, Rimner A, Deasy JO, Thor M. Cardio-pulmonary substructure segmentation of radiotherapy computed tomography images using convolutional neural networks for clinical outcomes analysis. Physics and Imaging in Radiation Oncology. 14: 61-66. PMID 33458316 DOI: 10.1016/J.Phro.2020.05.009  0.72
2020 von Reibnitz D, Yorke ED, Oh JH, Apte AP, Yang J, Pham H, Thor M, Wu AJ, Fleisher M, Gelb E, Deasy JO, Rimner A. Predictive Modeling of Thoracic Radiotherapy Toxicity and the Potential Role of Serum Alpha-2-Macroglobulin. Frontiers in Oncology. 10: 1395. PMID 32850450 DOI: 10.3389/Fonc.2020.01395  0.8
2020 Thor M, Oh JH, Apte AP, Deasy JO. Registering Study Analysis Plans (SAPs) Before Dissecting Your Data-Updating and Standardizing Outcome Modeling. Frontiers in Oncology. 10: 978. PMID 32670879 DOI: 10.3389/Fonc.2020.00978  0.786
2020 Katsoulakis E, Yu Y, Apte AP, Leeman JE, Katabi N, Morris L, Deasy JO, Chan TA, Lee NY, Riaz N, Hatzoglou V, Oh JH. Radiomic analysis identifies tumor subtypes associated with distinct molecular and microenvironmental factors in head and neck squamous cell carcinoma. Oral Oncology. 110: 104877. PMID 32619927 DOI: 10.1016/J.Oraloncology.2020.104877  0.752
2020 Mathews JC, Nadeem S, Pouryahya M, Belkhatir Z, Deasy JO, Levine AJ, Tannenbaum AR. Functional network analysis reveals an immune tolerance mechanism in cancer. Proceedings of the National Academy of Sciences of the United States of America. PMID 32601217 DOI: 10.1073/Pnas.2002179117  0.776
2020 LoCastro E, Paudyal R, Mazaheri Y, Hatzoglou V, Oh JH, Lu Y, Konar AS, Vom Eigen K, Ho A, Ewing JR, Lee N, Deasy JO, Shukla-Dave A. Computational Modeling of Interstitial Fluid Pressure and Velocity in Head and Neck Cancer Based on Dynamic Contrast-Enhanced Magnetic Resonance Imaging: Feasibility Analysis. Tomography (Ann Arbor, Mich.). 6: 129-138. PMID 32548289 DOI: 10.18383/j.tom.2020.00005  0.682
2020 Thor M, Deasy JO, Hu C, Gore E, Bar-Ad V, Robinson C, Wheatley M, Oh JH, Bogart J, Garces YI, Kavadi VS, Narayan S, Iyengar P, Witt JS, Welsh JW, et al. Modeling the impact of cardio-pulmonary irradiation on overall survival in NRG Oncology trial RTOG 0617. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 32398326 DOI: 10.1158/1078-0432.Ccr-19-2627  0.799
2020 Lambin P, Lieverse RIY, Eckert F, Marcus D, Oberije C, van der Wiel AMA, Guha C, Dubois LJ, Deasy JO. Lymphocyte-Sparing Radiotherapy: The Rationale for Protecting Lymphocyte-rich Organs When Combining Radiotherapy With Immunotherapy. Seminars in Radiation Oncology. 30: 187-193. PMID 32381298 DOI: 10.1016/J.Semradonc.2019.12.003  0.509
2020 Shaverdian N, Thor M, Shepherd AF, Offin MD, Jackson A, Wu AJ, Gelblum DY, Yorke ED, Simone CB, Chaft JE, Hellmann MD, Gomez DR, Rimner A, Deasy JO. Radiation pneumonitis in lung cancer patients treated with chemoradiation plus durvalumab. Cancer Medicine. PMID 32372571 DOI: 10.1002/Cam4.3113  0.634
2020 Apte AP, Iyer A, Thor M, Pandya R, Haq R, Jiang J, LoCastro E, Shukla-Dave A, Sasankan N, Xiao Y, Hu YC, Elguindi S, Veeraraghavan H, Oh JH, Jackson A, ... Deasy JO, et al. Library of deep-learning image segmentation and outcomes model-implementations. Physica Medica : Pm : An International Journal Devoted to the Applications of Physics to Medicine and Biology : Official Journal of the Italian Association of Biomedical Physics (Aifb). 73: 190-196. PMID 32371142 DOI: 10.1016/J.Ejmp.2020.04.011  0.796
2020 Taasti VT, Hong L, Shim JSA, Deasy JO, Zarepisheh M. Automating proton treatment planning with beam angle selection using Bayesian optimization. Medical Physics. PMID 32356335 DOI: 10.1002/Mp.14215  0.705
2020 Tyagi N, Zakian KL, Italiaander M, Almujayyaz S, Lis E, Yamada J, Topf J, Hunt M, Deasy JO. Technical Note: A Custom-designed Flexible MR Coil Array for Spine Radiotherapy Treatment Planning. Medical Physics. PMID 32304237 DOI: 10.1002/Mp.14184  0.316
2020 Oh JH, Pouryahya M, Iyer A, Apte AP, Deasy JO, Tannenbaum A. A novel kernel Wasserstein distance on Gaussian measures: An application of identifying dental artifacts in head and neck computed tomography. Computers in Biology and Medicine. 120: 103731. PMID 32217284 DOI: 10.1016/J.Compbiomed.2020.103731  0.787
2020 Taasti VT, Hong L, Deasy JO, Zarepisheh M. Automated proton treatment planning with robust optimization using constrained hierarchical optimization. Medical Physics. PMID 32196679 DOI: 10.1002/Mp.14148  0.696
2020 Nie X, Saleh Z, Kadbi M, Zakian K, Deasy J, Rimner A, Li G. A super-resolution framework for the reconstruction of T2-weighted (T2w) time-resolved (TR) 4DMRI using T1w TR-4DMRI as the guidance. Medical Physics. PMID 32166757 DOI: 10.1002/Mp.14136  0.524
2020 Lee S, Liang X, Woods M, Reiner AS, Concannon P, Bernstein L, Lynch CF, Boice JD, Deasy JO, Bernstein JL, Oh JH. Machine learning on genome-wide association studies to predict the risk of radiation-associated contralateral breast cancer in the WECARE Study. Plos One. 15: e0226157. PMID 32106268 DOI: 10.1371/Journal.Pone.0226157  0.71
2020 Belkhatir Z, Pavon M, Mathews JC, Pouryahya M, Deasy JO, Norton L, Tannenbaum AR. Stochastic Norton-Simon-Massagué Tumor Growth Modeling: Controlled and Mixed-Effect Uncontrolled Analysis Ieee Transactions On Control Systems and Technology. 1-14. DOI: 10.1109/Tcst.2020.2975141  0.765
2019 Elguindi S, Zelefsky MJ, Jiang J, Veeraraghavan H, Deasy JO, Hunt MA, Tyagi N. Deep learning-based auto-segmentation of targets and organs-at-risk for magnetic resonance imaging only planning of prostate radiotherapy. Physics and Imaging in Radiation Oncology. 12: 80-86. PMID 32355894 DOI: 10.1016/J.Phro.2019.11.006  0.319
2019 Dowling RJO, Sparano JA, Goodwin PJ, Bidard FC, Cescon DW, Chandarlapaty S, Deasy JO, Dowsett M, Gray RJ, Henry NL, Meric-Bernstam F, Perlmutter J, Sledge GW, Thorat MA, Bratman SV, et al. Toronto Workshop on Late Recurrence in Estrogen Receptor-Positive Breast Cancer: Part 2: Approaches to Predict and Identify Late Recurrence, Research Directions. Jnci Cancer Spectrum. 3: pkz049. PMID 32337478 DOI: 10.1093/Jncics/Pkz049  0.303
2019 Mukherjee S, Hong L, Deasy JO, Zarepisheh M. Integrating soft and hard dose-volume constraints into hierarchical constrained IMRT optimization. Medical Physics. PMID 31742731 DOI: 10.1002/Mp.13908  0.37
2019 Klages P, Benslimane I, Riyahi S, Jiang J, Hunt M, Deasy JO, Veeraraghavan H, Tyagi N. Patch-Based Generative Adversarial Neural Network Models for Head and Neck MR-Only Planning. Medical Physics. PMID 31733164 DOI: 10.1002/Mp.13927  0.353
2019 Nadeem S, Zhang P, Rimner A, Sonke JJ, Deasy JO, Tannenbaum A. LDeform: Longitudinal Deformation Analysis for Adaptive Radiotherapy of Lung Cancer. Medical Physics. PMID 31693764 DOI: 10.1002/Mp.13907  0.737
2019 Martin ML, Adileh M, Hsu KS, Hua G, Lee SG, Li C, Fuller JD, Rotolo JA, Bodo S, Klingler S, Haimovitz-Friedman A, Deasy JO, Fuks Z, Paty PB, Kolesnick RN. Organoids reveal that inherent radiosensitivity of small and large intestinal stem cells determines organ sensitivity. Cancer Research. PMID 31690670 DOI: 10.1158/0008-5472.Can-19-0312  0.371
2019 Hotca A, Thor M, Deasy JO, Rimner A. Dose to the cardio-pulmonary system and treatment-induced electrocardiogram abnormalities in locally advanced non-small cell lung cancer. Clinical and Translational Radiation Oncology. 19: 96-102. PMID 31650044 DOI: 10.1016/J.Ctro.2019.09.003  0.629
2019 Thor M, Montovano M, Hotca A, Luo L, Jackson A, Wu AJ, Deasy JO, Rimner A. Are unsatisfactory outcomes after concurrent chemoradiotherapy for locally advanced non-small cell lung cancer due to treatment-related immunosuppression? Radiotherapy and Oncology : Journal of the European Society For Therapeutic Radiology and Oncology. PMID 31615633 DOI: 10.1016/J.Radonc.2019.07.016  0.595
2019 Lee SH, Rimner A, Deasy JO, Hunt MA, Tyagi N. Dual-input tracer kinetic modeling of dynamic contrast-enhanced MRI in thoracic malignancies. Journal of Applied Clinical Medical Physics. PMID 31602789 DOI: 10.1002/Acm2.12740  0.31
2019 Haq R, Berry SL, Deasy JO, Hunt M, Veeraraghavan H. Dynamic Multi-Atlas Selection Based Consensus Segmentation of Head and Neck Structures from CT Images. Medical Physics. PMID 31587300 DOI: 10.1002/Mp.13854  0.32
2019 Mathews JC, Pouryahya M, Moosmüller C, Kevrekidis YG, Deasy JO, Tannenbaum A. Molecular phenotyping using networks, diffusion, and topology: soft tissue sarcoma. Scientific Reports. 9: 13982. PMID 31562358 DOI: 10.1038/S41598-019-50300-2  0.735
2019 Mathews JC, Nadeem S, Levine AJ, Pouryahya M, Deasy JO, Tannenbaum A. Robust and interpretable PAM50 reclassification exhibits survival advantage for myoepithelial and immune phenotypes. Npj Breast Cancer. 5: 30. PMID 31531391 DOI: 10.1038/s41523-019-0124-8  0.767
2019 Wang C, Rimner A, Hu YC, Tyagi N, Jiang J, Yorke E, Riyahi S, Mageras G, Deasy JO, Zhang P. Towards Predicting the Evolution of Lung Tumors During Radiotherapy Observed on a Longitudinal MR Imaging Study Via a Deep Learning Algorithm. Medical Physics. PMID 31410855 DOI: 10.1002/Mp.13765  0.308
2019 Elkin R, Nadeem S, LoCastro E, Paudyal R, Hatzoglou V, Lee NY, Shukla-Dave A, Deasy JO, Tannenbaum A. Optimal mass transport kinetic modeling for head and neck DCE-MRI: Initial analysis. Magnetic Resonance in Medicine. PMID 31273818 DOI: 10.1002/Mrm.27897  0.706
2019 Um H, Tixier F, Bermudez D, Deasy JO, Young RJ, Veeraraghavan H. Impact of image preprocessing on the scanner dependence of multi-parametric MRI radiomic features and covariate shift in multi-institutional glioblastoma datasets. Physics in Medicine and Biology. PMID 31272093 DOI: 10.1088/1361-6560/Ab2F44  0.305
2019 Palma G, Monti S, Thor M, Rimner A, Deasy JO, Cella L. Spatial signature of dose patterns associated with acute radiation-induced lung damage in lung cancer patients treated with Stereotactic Body Radiation Therapy. Physics in Medicine and Biology. PMID 31261141 DOI: 10.1088/1361-6560/Ab2E16  0.657
2019 Taasti VT, Jeong J, Jackson A, Deasy JO. A theoretical investigation of adequate range uncertainty margins in proton treatment planning to preserve tumor control probability. Acta Oncologica (Stockholm, Sweden). 1-5. PMID 31241385 DOI: 10.1080/0284186X.2019.1627415  0.78
2019 Zarepisheh M, Hong L, Zhou Y, Oh JH, Mechalakos JG, Margie HA, Mageras GS, Deasy JO. Automated intensity modulated treatment planning: the expedited constrained hierarchical optimization (ECHO) system. Medical Physics. PMID 31055858 DOI: 10.1002/Mp.13572  0.707
2019 Thor M, Deasy JO, Paulus R, Robert Lee W, Amin MB, Bruner DW, Low DA, Shah AB, Malone SC, Michalski JM, Dayes IS, Seaward SA, Gore EM, Albert M, Pisansky TM, et al. Tolerance doses for late adverse events after hypofractionated radiotherapy for prostate cancer on trial NRG Oncology/RTOG 0415. Radiotherapy and Oncology : Journal of the European Society For Therapeutic Radiology and Oncology. 135: 19-24. PMID 31015166 DOI: 10.1016/J.Radonc.2019.02.014  0.625
2019 Braunstein LZ, Thor M, Flynn J, Cost Z, Wilgucki M, Rosenbaum S, Zhang Z, Gillespie E, McCormick B, Khan A, Ho A, Cahlon O, Deasy JO, Powell SN. Daily Fractionation of External Beam Accelerated Partial Breast Irradiation to 40Gy is Well Tolerated and Locally Effective. International Journal of Radiation Oncology, Biology, Physics. PMID 30851350 DOI: 10.1016/J.Ijrobp.2019.02.050  0.616
2019 Tixier F, Um H, Bermudez D, Iyer A, Apte A, Graham MS, Nevel KS, Deasy JO, Young RJ, Veeraraghavan H. Preoperative MRI-radiomics features improve prediction of survival in glioblastoma patients over MGMT methylation status alone. Oncotarget. 10: 660-672. PMID 30774763 DOI: 10.18632/Oncotarget.26578  0.549
2019 Saleh Z, Apte A, Sharp G, Deasy J. WE-E-213CD-11: A New Automatically Generated Metric for Evaluating the Spatial Precision of Deformable Image Registrations: The Distance Discordance Metric. Medical Physics. 39: 3962. PMID 28520012 DOI: 10.1118/1.4736167  0.489
2019 Apte A, Wang Y, Deasy J. WE-E-BRB-11: Riview a Web-Based Viewer for Radiotherapy. Medical Physics. 39: 3958. PMID 28519991 DOI: 10.1118/1.4736153  0.572
2019 Pouryahya M, Oh JH, Javanmard P, Mathews JC, Belkhatir Z, Tannenbaum AR, Deasy JO. Integrative network-based clustering of multiomics data for subtype analysis of breast and lung cancer F1000research. 8. DOI: 10.7490/F1000Research.1117188.1  0.774
2019 Lee S, Deasy JO, Oh JH, Di Meglio A, Boyault S, Rousseau-Tsangaris M, Besse C, Thomas E, Boland-Augé A, Cottu PH, Tredan O, Levy C, Martin A, Everhard S, Ganz PA, et al. Prediction of treatment (tx)-induced fatigue in breast cancer (BC) patients (pts) using machine learning on genome-wide association (GWAS) data in the prospective CANTO cohort. Journal of Clinical Oncology. 37: 11515-11515. DOI: 10.1200/Jco.2019.37.15_Suppl.11515  0.505
2019 Haimovitz-Friedman A, Humm J, Deasy JO, Wolchok J, Merghoub T, Russell J, Li H, Samstein R, Budhu S, Powell S, Bodden C, Markovsky E, Chen Q. Abstract 3735: An anti-tumor immune response is evoked by partial-volume single dose radiation Cancer Research. DOI: 10.1158/1538-7445.Sabcs18-3735  0.341
2019 Riyahi S, Thor M, Rimner A, Tyagi N, Kuo L, Nadeem S, Lu W, Yorke ED, Deasy JO, Zhang P. Assessing Accumulated Dose and Geometrical Changes of Esophagus from Weekly Mris Acquired during Radiotherapy of Locally Advanced Lung Cancer International Journal of Radiation Oncology Biology Physics. 105. DOI: 10.1016/J.Ijrobp.2019.06.845  0.777
2019 Yu Y, Chen L, Riaz N, Kang JJ, Thor M, Veeraraghavan H, Apte A, Tsai CJ, Deasy JO, Sherman E, Lee N, McBride S. Predictors of Early Response to Immunotherapy in Head and Neck Cancer: A Secondary Clinical and Radiomic Analysis of a Prospective Randomized Trial with Nivolumab International Journal of Radiation Oncology Biology Physics. 105. DOI: 10.1016/J.Ijrobp.2019.06.286  0.691
2019 Thor M, Montovano M, Hotca AE, Luo L, Jackson A, Wu AJ, Deasy JO, Rimner A. Are the Unsatisfactory Outcomes after Concurrent Chemo-radiotherapy for Locally Advanced Non-small Cell Lung Cancer due to a Treatment-induced Immune Suppression? International Journal of Radiation Oncology Biology Physics. 105. DOI: 10.1016/J.Ijrobp.2019.06.2448  0.6
2019 Shaverdian N, Zhang Z, Lobaugh S, Deasy JO, Offin M, Preeshagul I, Hellmann MD, Chaft J, Shepherd AF, Gelblum D, Lee N, Gomez D, Wu AJ, Rimner A. Real-World Evaluation of Consolidative Durvalumab in Locally Advanced Non-Small-Cell Lung Cancer Treated with Definitive Chemoradiation International Journal of Radiation Oncology Biology Physics. 105. DOI: 10.1016/J.Ijrobp.2019.06.2437  0.309
2019 Stam B, Thor M, Deasy J, Rimner A, Belderbos J, Sonke J. Building and Validating a Cardiac Dose Model for Overall Survival in Early Stage Lung Cancer International Journal of Radiation Oncology*Biology*Physics. 105: S172. DOI: 10.1016/J.Ijrobp.2019.06.204  0.608
2019 Thor M, Fitzgerald KJ, Iyer A, Apte A, Oh JH, Chaft J, Wu AJ, Offin M, Gelblum D, Deasy JO, Rimner A. Predicting Tumor Progression in Early Stage Non-small Cell Lung Cancer Using Pre-treatment Imaging International Journal of Radiation Oncology Biology Physics. 105. DOI: 10.1016/J.Ijrobp.2019.06.1394  0.71
2018 Casares-Magaz O, Muren LP, Pettersson N, Thor M, Hopper A, Knopp R, Deasy JO, Væth M, Einck J, Moiseenko V. A case-control study using motion-inclusive spatial dose-volume metrics to account for genito-urinary toxicity following high-precision radiotherapy for prostate cancer. Physics and Imaging in Radiation Oncology. 7: 65-69. PMID 33458407 DOI: 10.1016/J.Phro.2018.09.005  0.63
2018 Unkelbach J, Alber M, Bangert M, Bokrantz R, Chan TCY, Deasy JO, Fredriksson A, Gorissen BL, van Herk M, Liu W, Mahmoudzadeh H, Nohadani O, Siebers JV, Witte M, Xu H. Robust radiotherapy planning. Physics in Medicine and Biology. 63: 22TR02. PMID 30418942 DOI: 10.1088/1361-6560/Aae659  0.375
2018 Markovsky E, Budhu S, Samstein RM, Li H, Russell J, Zhang Z, Drill E, Bodden C, Chen Q, Powell SN, Merghoub T, Wolchok JD, Humm J, Deasy JO, Haimovitz-Friedman A. An Anti-Tumor Immune Response is Evoked By Partial-Volume Single Dose Radiation in Two Murine Models. International Journal of Radiation Oncology, Biology, Physics. PMID 30342090 DOI: 10.1016/J.Ijrobp.2018.10.009  0.34
2018 Gay HA, Oh JH, Apte AP, Daly MD, Adkins DR, Rich J, Oppelt PJ, Dyk PT, Mullen DF, Eschen L, Chin RI, Nussenbaum B, Haughey BH, Thorstad WL, Deasy JO. Predictors of acute throat or esophageal patient reported pain during radiation therapy for head and neck cancer. Clinical and Translational Radiation Oncology. 13: 1-6. PMID 30211324 DOI: 10.1016/J.Ctro.2018.08.004  0.761
2018 Olsson CE, Jackson A, Deasy JO, Thor M. A systematic post-QUANTEC review of tolerance doses for late toxicity after prostate cancer radiotherapy. International Journal of Radiation Oncology, Biology, Physics. PMID 30125635 DOI: 10.1016/J.Ijrobp.2018.08.015  0.644
2018 Zhang P, Yorke E, Mageras G, Rimner A, Sonke JJ, Deasy JO. Validating a Predictive Atlas of Tumor Shrinkage for Adaptive Radiotherapy of Locally Advanced Lung Cancer. International Journal of Radiation Oncology, Biology, Physics. PMID 30061006 DOI: 10.1016/J.Ijrobp.2018.05.056  0.393
2018 Beasley W, Thor M, McWilliam A, Green A, Mackay R, Slevin N, Olsson C, Pettersson N, Finizia C, Estilo C, Riaz N, Lee NY, Deasy JO, van Herk M. Image-based Data Mining to Probe Dosimetric Correlates of Radiation-induced Trismus. International Journal of Radiation Oncology, Biology, Physics. PMID 30061005 DOI: 10.1016/J.Ijrobp.2018.05.054  0.641
2018 Jiang J, Hu YC, Liu CJ, Halpenny D, Hellmann MD, Deasy JO, Mageras G, Veeraraghavan H. Multiple Resolution Residually Connected Feature Streams For Automatic Lung Tumor Segmentation From CT Images. Ieee Transactions On Medical Imaging. PMID 30040632 DOI: 10.1109/Tmi.2018.2857800  0.322
2018 van Dijk LV, Thor M, Steenbakkers RJHM, Apte A, Zhai TT, Borra R, Noordzij W, Estilo C, Lee N, Langendijk JA, Deasy JO, Sijtsema NM. Parotid gland fat related Magnetic Resonance image biomarkers improve prediction of late radiation-induced xerostomia. Radiotherapy and Oncology : Journal of the European Society For Therapeutic Radiology and Oncology. PMID 29958772 DOI: 10.1016/J.Radonc.2018.06.012  0.745
2018 Apte AP, Iyer A, Crispin-Ortuzar M, Pandya R, van Dijk LV, Spezi E, Thor M, Um H, Veeraraghavan H, Oh JH, Shukla-Dave A, Deasy JO. Technical Note: Extension of CERR for computational radiomics: a comprehensive MATLAB platform for reproducible radiomics research. Medical Physics. PMID 29896896 DOI: 10.1002/Mp.13046  0.768
2018 Pouryahya M, Oh JH, Mathews JC, Deasy JO, Tannenbaum AR. Characterizing Cancer Drug Response and Biological Correlates: A Geometric Network Approach. Scientific Reports. 8: 6402. PMID 29686393 DOI: 10.1038/S41598-018-24679-3  0.771
2018 Munck Af Rosenschold P, Zelefsky MJ, Apte AP, Jackson A, Oh JH, Shulman E, Desai N, Hunt M, Ghadjar P, Yorke E, Deasy JO. Image-guided radiotherapy reduces the risk of under-dosing high-risk prostate cancer extra-capsular disease and improves biochemical control. Radiation Oncology (London, England). 13: 64. PMID 29650035 DOI: 10.1186/S13014-018-0978-1  0.772
2018 Thor M, Jackson A, Zelefsky MJ, Steineck G, Karlsdòttir A, Høyer M, Liu M, Nasser NJ, Petersen SE, Moiseenko V, Deasy JO. Inter-institutional analysis demonstrates the importance of lower than previously anticipated dose regions to prevent late rectal bleeding following prostate radiotherapy. Radiotherapy and Oncology : Journal of the European Society For Therapeutic Radiology and Oncology. PMID 29530433 DOI: 10.1016/J.Radonc.2018.02.020  0.613
2018 Lee S, Kerns S, Ostrer H, Rosenstein B, Deasy JO, Oh JH. Machine Learning on a Genome-wide Association Study to Predict Late Genitourinary Toxicity After Prostate Radiation Therapy. International Journal of Radiation Oncology, Biology, Physics. PMID 29502932 DOI: 10.1016/J.Ijrobp.2018.01.054  0.714
2018 Choi W, Oh JH, Riyahi S, Liu CJ, Jiang F, Chen W, White C, Rimner A, Mechalakos JG, Deasy JO, Lu W. Radiomics analysis of pulmonary nodules in low-dose CT for early detection of lung cancer. Medical Physics. PMID 29457229 DOI: 10.1002/Mp.12820  0.708
2018 Dean J, Wong K, Gay H, Welsh L, Jones AB, Schick U, Oh JH, Apte A, Newbold K, Bhide S, Harrington K, Deasy J, Nutting C, Gulliford S. Incorporating spatial dose metrics in machine learning-based normal tissue complication probability (NTCP) models of severe acute dysphagia resulting from head and neck radiotherapy. Clinical and Translational Radiation Oncology. 8: 27-39. PMID 29399642 DOI: 10.1016/J.Ctro.2017.11.009  0.789
2018 Dashevsky BZ, Oh JH, Apte AP, Bernard-Davila B, Morris EA, Deasy JO, Sutton EJ. MRI features predictive of negative surgical margins in patients with HER2 overexpressing breast cancer undergoing breast conservation. Scientific Reports. 8: 315. PMID 29321645 DOI: 10.1038/S41598-017-18758-0  0.75
2018 Thor M, Deasy J. The role of heart-related dose-volume metrics on overall survival in the RTOG 0617 clinical trial International Journal of Radiation Oncology Biology Physics. 102. DOI: 10.17605/Osf.Io/Hzsva  0.59
2018 Thor M, Jackson A, Iyer A, Bendau E, Fontanella A, Apte A, Yorke E, Rimner A, Deasy J. PO-0997: Towards personalized dose-escalation in non-small cell lung cancer: Validation of published models Radiotherapy and Oncology. 127: S555-S556. DOI: 10.1016/S0167-8140(18)31307-0  0.787
2018 Lee S, Oh J, Kerns S, Rosenstein B, Ostrer H, Deasy J. PV-0564: Predicting Genitourinary Toxicity by Machine Learning on Genome-Wide Single Nucleotide Polymorphisms Radiotherapy and Oncology. 127: S297-S298. DOI: 10.1016/S0167-8140(18)30874-0  0.476
2018 Deasy J, Lee S, Oh J, Kerns S, Orstrer H, Rosenstein B. SP-0484: Machine Learning of radiogenomics SNP GWAS to predict complication risk and to identify key biological correlates Radiotherapy and Oncology. 127: S249. DOI: 10.1016/S0167-8140(18)30794-1  0.478
2018 Van Dijk L, Thor M, Steenbakkers R, Apte A, Zhai T, Borra R, Lee N, Langendijk J, Deasy J, Sijtsema N. OC-0180: Parotid gland fat related magnetic resonance image biomarkers improve prediction of late xerostomia Radiotherapy and Oncology. 127: S95-S96. DOI: 10.1016/S0167-8140(18)30490-0  0.77
2018 Thor M, Hotca A, Jackson A, Yorke E, Rimner A, Deasy J. SP-0112: Dose to cardiac substructures predicts survival in non-small cell lung cancer chemo-radiotherapy Radiotherapy and Oncology. 127: S58-S59. DOI: 10.1016/S0167-8140(18)30422-5  0.615
2018 Palma G, Monti S, Thor M, Soscia E, Sirignano C, Rimner A, Deasy JO, Cella L. Redesign of Voxel-Based Analysis for SBRT Lung Cancer Patients and Refinement of Findings on Regional Dose Differences Associated with Radiation-Induced Acute Lung Damage International Journal of Radiation Oncology Biology Physics. 102. DOI: 10.1016/J.Ijrobp.2018.06.246  0.633
2018 Hotca A, Thor M, Deasy J, Rimner A. Association of Dose to Cardio-vascular Structures with Treatment-induced Electrocardiogram changes in Stage III Non-Small Cell Lung Cancer International Journal of Radiation Oncology*Biology*Physics. 102: S91. DOI: 10.1016/J.Ijrobp.2018.06.237  0.612
2018 Katsoulakis E, Oh J, Leeman J, Yu Y, Tsai C, McBride S, Katabi N, Apte A, Deasy J, Lee N, Hatzoglou V, Riaz N. Identifying Biological Subtypes of Head and Neck Squamous Cell Carcinoma (HNSCC) From Contrast Enhanced CT Scans Using Radiomic and the Cancer Genome Atlas (TCGA) International Journal of Radiation Oncology*Biology*Physics. 102: S60-S61. DOI: 10.1016/J.Ijrobp.2018.06.170  0.56
2017 Crispin-Ortuzar M, Apte A, Grkovski M, Oh JH, Lee NY, Schöder H, Humm JL, Deasy JO. Predicting hypoxia status using a combination of contrast-enhanced computed tomography and [18F]-Fluorodeoxyglucose positron emission tomography radiomics features. Radiotherapy and Oncology : Journal of the European Society For Therapeutic Radiology and Oncology. PMID 29273260 DOI: 10.1016/J.Radonc.2017.11.025  0.776
2017 Pommer T, Oh JH, Munck Af Rosenschöld P, Deasy JO. Simulating intrafraction prostate motion with a random walk model. Advances in Radiation Oncology. 2: 429-436. PMID 29114612 DOI: 10.1016/J.Adro.2017.03.005  0.706
2017 Thor M, Tyagi N, Hatzoglou V, Apte A, Saleh Z, Riaz N, Lee NY, Deasy JO. A Magnetic Resonance Imaging-based approach to quantify radiation-induced normal tissue injuries applied to trismus in head and neck cancer. Physics and Imaging in Radiation Oncology. 1: 34-40. PMID 29057333 DOI: 10.1016/J.Phro.2017.02.006  0.772
2017 Casares-Magaz O, Muren LP, Moiseenko V, Petersen SE, Pettersson NJ, Høyer M, Deasy JO, Thor M. Spatial rectal dose/volume metrics predict patient-reported gastro-intestinal symptoms after radiotherapy for prostate cancer. Acta Oncologica (Stockholm, Sweden). 1-7. PMID 28885095 DOI: 10.1080/0284186X.2017.1370130  0.63
2017 Witte MG, Sonke JJ, Siebers JV, Deasy JO, van Herk M. Beyond the margin recipe: the probability of correct target dosage and tumor control in the presence of a dose limiting structure. Physics in Medicine and Biology. PMID 28832334 DOI: 10.1088/1361-6560/Aa87Fe  0.373
2017 Hajj C, Russell J, Hart CP, Goodman KA, Lowery MA, Haimovitz-Friedman A, Deasy JO, Humm JL. A Combination of Radiation and the Hypoxia-Activated Prodrug Evofosfamide (TH-302) is Efficacious against a Human Orthotopic Pancreatic Tumor Model. Translational Oncology. 10: 760-765. PMID 28778024 DOI: 10.1016/J.Tranon.2017.06.010  0.365
2017 Chen Y, Cruz FD, Sandhu R, Kung AL, Mundi P, Deasy JO, Tannenbaum A. Pediatric Sarcoma Data Forms a Unique Cluster Measured via the Earth Mover's Distance. Scientific Reports. 7: 7035. PMID 28765612 DOI: 10.1038/S41598-017-07551-8  0.487
2017 Huang EX, Robinson CG, Molotievschi A, Bradley JD, Deasy JO, Oh JH. Independent test of a model to predict severe acute esophagitis. Advances in Radiation Oncology. 2: 37-43. PMID 28740914 DOI: 10.1016/J.Adro.2016.11.003  0.79
2017 Mahmood U, Apte AP, Deasy JO, Schmidtlein CR, Shukla-Dave A. Investigating the Robustness Neighborhood Gray Tone Difference Matrix and Gray Level Co-occurrence Matrix Radiomic Features on Clinical Computed Tomography Systems Using Anthropomorphic Phantoms: Evidence From a Multivendor Study. Journal of Computer Assisted Tomography. PMID 28708732 DOI: 10.1097/Rct.0000000000000632  0.551
2017 Folkert MR, Setton J, Apte AP, Grkovski M, Young RJ, Schöder H, Thorstad WL, Lee NY, Deasy JO, Oh JH. Predictive modeling of outcomes following definitive chemoradiotherapy for oropharyngeal cancer based on FDG-PET image characteristics. Physics in Medicine and Biology. 62: 5327-5343. PMID 28604368 DOI: 10.1088/1361-6560/Aa73Cc  0.775
2017 Jeong J, Oh JH, Sonke JJ, Belderbos JSA, Bradley JD, Fontanella AN, Rao SS, Deasy J. Modeling the Cellular Response of Lung Cancer to Radiation Therapy for a Broad Range of Fractionation Schedules. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 28539466 DOI: 10.1158/1078-0432.Ccr-16-3277  0.812
2017 Thor M, Olsson CE, Oh JH, Hedström J, Pauli N, Johansson M, Deasy JO, Finizia C. Temporal patterns of patient-reported trismus and associated mouth-opening distances in radiotherapy for head and neck cancer: A prospective cohort study. Clinical Otolaryngology : Official Journal of Ent-Uk ; Official Journal of Netherlands Society For Oto-Rhino-Laryngology & Cervico-Facial Surgery. PMID 28463432 DOI: 10.1111/Coa.12896  0.68
2017 Farjam R, Tyagi N, Veeraraghavan H, Apte A, Zakian K, Hunt MA, Deasy JO. Multi-atlas approach with local registration goodness weighting for MRI-based electron density mapping of head and neck anatomy. Medical Physics. PMID 28444772 DOI: 10.1002/Mp.12303  0.587
2017 Casares-Magaz O, Moiseenko V, Hopper A, Pettersson NJ, Thor M, Knopp R, Deasy JO, Muren LP, Einck J. Associations between volume changes and spatial dose metrics for the urinary bladder during local versus pelvic irradiation for prostate cancer. Acta Oncologica (Stockholm, Sweden). 1-7. PMID 28401808 DOI: 10.1080/0284186X.2017.1312014  0.631
2017 Vargas HA, Veeraraghavan H, Micco M, Nougaret S, Lakhman Y, Meier AA, Sosa R, Soslow RA, Levine DA, Weigelt B, Aghajanian C, Hricak H, Deasy J, Snyder A, Sala E. A novel representation of inter-site tumour heterogeneity from pre-treatment computed tomography textures classifies ovarian cancers by clinical outcome. European Radiology. PMID 28289945 DOI: 10.1007/S00330-017-4779-Y  0.314
2017 Owosho AA, Thor M, Oh JH, Riaz N, Tsai CJ, Rosenberg H, Varthis S, Yom SH, Huryn JM, Lee NY, Deasy JO, Estilo CL. The role of parotid gland irradiation in the development of severe hyposalivation (xerostomia) after intensity-modulated radiation therapy for head and neck cancer: Temporal patterns, risk factors, and testing the QUANTEC guidelines. Journal of Cranio-Maxillo-Facial Surgery : Official Publication of the European Association For Cranio-Maxillo-Facial Surgery. PMID 28256385 DOI: 10.1016/J.Jcms.2017.01.020  0.777
2017 Oh JH, Kerns S, Ostrer H, Powell SN, Rosenstein B, Deasy JO. Computational methods using genome-wide association studies to predict radiotherapy complications and to identify correlative molecular processes. Scientific Reports. 7: 43381. PMID 28233873 DOI: 10.1038/Srep43381  0.707
2017 Steineck G, Skokic V, Sjöberg F, Bull C, Alevronta E, Dunberger G, Bergmark K, Wilderäng U, Oh JH, Deasy JO, Jörnsten R. Identifying radiation-induced survivorship syndromes affecting bowel health in a cohort of gynecological cancer survivors. Plos One. 12: e0171461. PMID 28158314 DOI: 10.1371/Journal.Pone.0171461  0.698
2017 Crispin-Ortuzar M, Jeong J, Fontanella A, Deasy J. A radiobiological model of radiotherapy response and its correlation with prognostic imaging variables. Physics in Medicine and Biology. PMID 28140359 DOI: 10.1088/1361-6560/Aa5D42  0.795
2017 Zhang P, Rimner A, Yorke E, Hu YC, Kuo L, Apte A, Lockney N, Jackson A, Mageras G, Deasy JO. A geometric atlas to predict lung tumor shrinkage for radiotherapy treatment planning. Physics in Medicine and Biology. 62: 702-714. PMID 28072571 DOI: 10.1088/1361-6560/Aa54F9  0.623
2017 Olsson C, Thor M, Deasy J. EP-1609: Tolerance doses for detailed late effects after prostate cancer radiotherapy - a post-QUANTEC review Radiotherapy and Oncology. 123: S869-S870. DOI: 10.1016/S0167-8140(17)32044-3  0.62
2017 Crispin Ortuzar M, Grkovski M, Beattie B, Lee N, Riaz N, Humm J, Jeong J, Fontanella A, Deasy J. PO-0890: PET-based radiobiological modeling of changes in tumor hypoxia during chemoradiotherapy Radiotherapy and Oncology. 123: S489-S490. DOI: 10.1016/S0167-8140(17)31327-0  0.739
2017 Thor M, Olsson C, Oh J, Pauli N, Pettersson N, Finizia C, Deasy J. PO-0854: Is radiation-induced trismus a time dependent masticatory structure story? Radiotherapy and Oncology. 123: S464. DOI: 10.1016/S0167-8140(17)31291-4  0.672
2017 Deasy J, Thor M, Oh J, Rimner A. SP-0578: New NTCP data in the thoracic region: probing 'dark toxicity' Radiotherapy and Oncology. 123: S306. DOI: 10.1016/S0167-8140(17)31018-6  0.536
2017 Casares-Magaz O, Moiseenko V, Hopper A, Pettersson N, Thor M, Knopp R, Deasy J, Muren L, Einck J. OC-0489: Variation in bladder volume and associated spatial dose metrics in prostate and pelvic radiotherapy Radiotherapy and Oncology. 123: S260. DOI: 10.1016/S0167-8140(17)30929-5  0.608
2017 Jin J, Hu C, Wang W, Zhang H, Yu J, Bentzen S, Deasy J, Xiao Y, Schild S, Bogart J, Dobelbower M, Michalski J, Kavadi V, Narayan S, Iyengar P, et al. Effect of PTV and Collimator Margins on Tumor Control for Patients with Stage III Non-small Cell Lung Cancer in NRG Oncology RTOG-0617 International Journal of Radiation Oncology*Biology*Physics. 99: S181-S182. DOI: 10.1016/J.Ijrobp.2017.06.455  0.49
2017 Beasley W, Thor M, McWilliam A, Green A, Mackay R, Slevin N, Olsson C, Pettersson N, Finizia C, Deasy J, van Herk M. Image-Based Data Mining for Identifying Regions Exhibiting a Dose-Response Relationship with Radiation-Induced Trismus International Journal of Radiation Oncology*Biology*Physics. 99: S165. DOI: 10.1016/J.Ijrobp.2017.06.380  0.632
2017 Thor M, Yorke E, Jackson A, Deasy J, Rimner A, Hotca-Cho A. Succesful Implementation of Atlas Segmentation for Cardiac Substructures International Journal of Radiation Oncology*Biology*Physics. 99: E728. DOI: 10.1016/J.Ijrobp.2017.06.2354  0.527
2017 Crispin-Ortuzar M, Apte A, Grkovski M, Oh J, Lee N, Humm J, Deasy J. Combined FDG and CT Radiomics Features Predict FMISO Uptake in Head and Neck Cancer International Journal of Radiation Oncology*Biology*Physics. 99: S49-S50. DOI: 10.1016/J.Ijrobp.2017.06.126  0.78
2016 Chen Y, Oh JH, Sandhu R, Lee S, Deasy JO, Tannenbaum A. Transcriptional Responses to Ultraviolet and Ionizing Radiation: An Approach Based on Graph Curvature. Proceedings. Ieee International Conference On Bioinformatics and Biomedicine. 2016: 1302-1306. PMID 28261534 DOI: 10.1109/BIBM.2016.7822706  0.733
2016 Apte AP, Deasy JO. SU-F-R-18: Updates to the Computational Environment for Radiological Research for Image Analysis. Medical Physics. 43: 3377. PMID 28048842 DOI: 10.1118/1.4955790  0.532
2016 Thor M, Tyagi N, Hazoglou V, Saleh Z, Riaz N, Lee N, Deasy J. WE-FG-202-07: An MRI-Based Approach to Quantify Radiation-Induced Normal Tissue Injury Applied to Trismus After Head and Neck Cancer Radiotherapy. Medical Physics. 43: 3828. PMID 28048452 DOI: 10.1118/1.4957919  0.719
2016 Zhang P, Kuo L, Yorke E, Hu Y, Lockney N, Mageras G, Deasy J, Rimner A. SU-C-202-04: Adapting Biologically Optimized Dose Escalation Based On Mid-Treatment PET/CT for Non-Small-Cell Lung Cancer. Medical Physics. 43: 3323. PMID 28047766 DOI: 10.1118/1.4955572  0.377
2016 Giger M, Deasy J. MO-FG-207B-00: State-of-the-Art in Radiomics in Radiology and Radiation Oncology. Medical Physics. 43: 3715. PMID 28046637 DOI: 10.1118/1.4957330  0.315
2016 Yang G, Li X, Ma R, Yorke E, Mageras G, Tang X, Xiong W, Chan M, Reyngold M, Gewanter R, Wu A, Deasy J, Hunt M. SU-F-T-253: Volumetric Comparison Between 4D CT Amplitude and Phase Binning Mode. Medical Physics. 43: 3520. PMID 28046624 DOI: 10.1118/1.4956393  0.309
2016 Thor M, Owosho A, Rosenburg H, Yom S, Oh J, Riaz N, Tsai J, Lee N, Huryn J, Estilo C, Deasy J. WE-AB-207B-08: Exploring and Refining the QUANTEC Guideline to Reduce Severe Hyposalivation Following IMRT for Head and Neck Cancer. Medical Physics. 43: 3805-3806. PMID 28046569 DOI: 10.1118/1.4957789  0.688
2016 Crispin-Ortuzar M, Grkovski M, Beattie B, Lee N, Riaz N, Humm J, Jeong J, Fontanella A, Deasy J. WE-AB-202-11: Radiobiological Modeling of Tumor Response During Radiotherapy Based On Pre-Treatment Dynamic PET Imaging Data. Medical Physics. 43: 3797. PMID 28046431 DOI: 10.1118/1.4957752  0.781
2016 Lee S, Rimner A, Hayes S, Hunt M, Deasy J, Zauderer M, Rusch V, Tyagi N. WE-FG-206-06: Dual-Input Tracer Kinetic Modeling and Its Analog Implementation for Dynamic Contrast-Enhanced (DCE-) MRI of Malignant Mesothelioma (MPM). Medical Physics. 43: 3832. PMID 28046320 DOI: 10.1118/1.4957936  0.316
2016 Oh J, Kerns S, Ostrer H, Rosenstein B, Deasy J. SU-D-204-06: Integration of Machine Learning and Bioinformatics Methods to Analyze Genome-Wide Association Study Data for Rectal Bleeding and Erectile Dysfunction Following Radiotherapy in Prostate Cancer. Medical Physics. 43: 3333. PMID 28046236 DOI: 10.1118/1.4955611  0.549
2016 Tyagi N, Fontenla S, Zhang J, Cloutier M, Kadbi M, Mechalakos J, Zelefsky M, Deasy J, Hunt M. Dosimetric and workflow evaluation of first commercial synthetic CT software for clinical use in pelvis. Physics in Medicine and Biology. PMID 27983520 DOI: 10.1088/1361-6560/Aa5452  0.322
2016 Thor M, Owosho AA, Clark HD, Oh JH, Riaz N, Hovan A, Tsai J, Thomas SD, Yom SH, Wu JS, Huryn JM, Moiseenko V, Lee NY, Estilo CL, Deasy JO. Internal and external generalizability of temporal dose-response relationships for xerostomia following IMRT for head and neck cancer. Radiotherapy and Oncology : Journal of the European Society For Therapeutic Radiology and Oncology. PMID 27890427 DOI: 10.1016/J.Radonc.2016.11.005  0.787
2016 Paudyal R, Oh JH, Riaz N, Venigalla P, Li J, Hatzoglou V, Leeman J, Nunez DA, Lu Y, Deasy JO, Lee N, Shukla-Dave A. Intravoxel incoherent motion diffusion-weighted MRI during chemoradiation therapy to characterize and monitor treatment response in human papillomavirus head and neck squamous cell carcinoma. Journal of Magnetic Resonance Imaging : Jmri. PMID 27862553 DOI: 10.1002/Jmri.25523  0.678
2016 Dean JA, Wong KH, Gay H, Welsh LC, Jones AB, Schick U, Oh JH, Apte A, Newbold KL, Bhide SA, Harrington KJ, Deasy JO, Nutting CM, Gulliford SL. Functional Data Analysis Applied to Modeling of Severe Acute Mucositis and Dysphagia Resulting From Head and Neck Radiation Therapy. International Journal of Radiation Oncology, Biology, Physics. 96: 820-831. PMID 27788955 DOI: 10.1016/J.Ijrobp.2016.08.013  0.785
2016 Thor M, Olsson CE, Oh JH, Pauli N, Johansson M, Deasy JO, Finizia C. What to Ask/When to Act-Patient-Reported Trismus and Mouth-Opening Distances in Head and Neck Cancer Radiation Therapy. International Journal of Radiation Oncology, Biology, Physics. 96: E530. PMID 27674938 DOI: 10.1016/J.Ijrobp.2016.06.1956  0.699
2016 von Reibnitz D, Yorke ED, Oh JH, Apte A, Wu AJ, Fleisher M, Gelb E, Deasy JO, Rimner A. Alpha-2-Macroglobulin as a Radioprotective Factor in Patients Undergoing Thoracic Radiation. International Journal of Radiation Oncology, Biology, Physics. 96: E469. PMID 27674774 DOI: 10.1016/J.Ijrobp.2016.06.1809  0.552
2016 Gay HA, Deasy JO, Apte A, Daly MD, Adkins D, Rich JT, Michel L, Wildes T, Dyk PT, Mullen D, Eschen L, Chin RI, Nussenbaum B, Haughey BH, Thorstad WL, et al. Predictors of Acute Throat or Esophageal Pain During Radiation Therapy for Head and Neck Cancer. International Journal of Radiation Oncology, Biology, Physics. 96: E392-E393. PMID 27674568 DOI: 10.1016/J.Ijrobp.2016.06.1618  0.67
2016 Oh JH, Thor M, Olsson C, Skokic V, Jörnsten R, Alsadius D, Pettersson N, Steineck G, Deasy JO. A Factor Analysis Approach for Clustering Patient Reported Outcomes. Methods of Information in Medicine. 55. PMID 27588322 DOI: 10.3414/Me16-01-0035  0.775
2016 Palma G, Monti S, D'Avino V, Conson M, Liuzzi R, Pressello MC, Donato V, Deasy JO, Quarantelli M, Pacelli R, Cella L. A Voxel-Based Approach to Explore Local Dose Differences Associated With Radiation-Induced Lung Damage. International Journal of Radiation Oncology, Biology, Physics. 96: 127-33. PMID 27511851 DOI: 10.1016/J.Ijrobp.2016.04.033  0.363
2016 Davidson SE, Cui J, Kry S, Deasy JO, Ibbott GS, Vicic M, White RA, Followill DS. Modification and validation of an analytical source model for external beam radiotherapy Monte Carlo dose calculations. Medical Physics. 43: 4842. PMID 27487902 DOI: 10.1118/1.4955434  0.383
2016 Saleh Z, Thor M, Apte AP, Sharp G, Tang X, Veeraraghavan H, Muren L, Deasy J. A multiple-image-based method to evaluate the performance of deformable image registration in the pelvis. Physics in Medicine and Biology. 61: 6172-6180. PMID 27469495 DOI: 10.1088/0031-9155/61/16/6172  0.764
2016 Thor M, Olsson C, Oh JH, Petersen SE, Alsadius D, Bentzen L, Pettersson N, Muren LP, Høyer M, Steineck G, Deasy JO. Urinary bladder dose-response relationships for patient-reported genitourinary morbidity domains following prostate cancer radiotherapy. Radiotherapy and Oncology : Journal of the European Society For Therapeutic Radiology and Oncology. PMID 26879287 DOI: 10.1016/J.Radonc.2016.01.013  0.774
2016 Jansen JF, Lu Y, Gupta G, Lee NY, Stambuk HE, Mazaheri Y, Deasy JO, Shukla-Dave A. Texture analysis on parametric maps derived from dynamic contrast-enhanced magnetic resonance imaging in head and neck cancer. World Journal of Radiology. 8: 90-7. PMID 26834947 DOI: 10.4329/Wjr.V8.I1.90  0.301
2016 Sutton EJ, Dashevsky BZ, Oh JH, Veeraraghavan H, Apte AP, Thakur SB, Morris EA, Deasy JO. Breast cancer molecular subtype classifier that incorporates MRI features. Journal of Magnetic Resonance Imaging : Jmri. PMID 26756416 DOI: 10.1002/Jmri.25119  0.745
2016 Farjam R, Tyagi N, Veeraraghavan H, Apte A, Zakian K, Hunt M, Deasy J. TU-AB-BRA-03: Atlas-Based Algorithms with Local Registration-Goodness Weighting for MRI-Driven Electron Density Mapping Medical Physics. 43: 3733-3733. DOI: 10.1118/1.4957413  0.565
2016 Tyagi N, Zhang J, Happersett L, Kadbi M, Mechalakos J, Deasy J, Hunt M. SU-G-JeP2-06: Dosimetric and Workflow Evaluation of First Commercial Synthetic CT Software for Clinical Use in Pelvis Medical Physics. 43: 3660-3660. DOI: 10.1118/1.4957026  0.32
2016 Oh J, Kerns S, Ostrer H, Rosenstein B, Deasy J. EP-2058: A novel multi-SNP model predictive of erectile dysfunction following radiotherapy in prostate cancer Radiotherapy and Oncology. 119: S971. DOI: 10.1016/S0167-8140(16)33309-6  0.539
2016 Thor M, Olsson CE, Hansen S, Petersen PM, Lindberg H, Kempel MM, Dysager L, Høyer M, Deasy JO, Bentzen L. EP-1360: Comparing patient and physician-reported GI effects in locally advanced prostate cancer radiotherapy Radiotherapy and Oncology. 119. DOI: 10.1016/S0167-8140(16)32610-X  0.598
2016 Thor M, Olsson C, Oh J, Hedström J, Pauli N, Deasy J, Finizia C. EP-1054: Temporal patterns of patient-reported trismus and associated mouth-opening distances in RT of HNC Radiotherapy and Oncology. 119: S509. DOI: 10.1016/S0167-8140(16)32304-0  0.65
2016 Casares-Magaz O, Moiseenko V, Hopper A, Pettersson N, Thor M, Cerviño L, Knopp R, Cornell M, Deasy JO, Muren LP, Einck J. PO-0904: Bladder changes assessment using daily cone-beam computed tomography Radiotherapy and Oncology. 119. DOI: 10.1016/S0167-8140(16)32154-5  0.564
2016 Monti S, Palma G, D'Avino V, Conson M, Liuzzi R, Pressello M, Donato V, Deasy J, Pacelli R, Cella L. PO-0871: Radiation-induced lung damage: beyond dose-volume histogram analysis Radiotherapy and Oncology. 119: S416-S417. DOI: 10.1016/S0167-8140(16)32121-1  0.365
2016 Casares-Magaz O, Muren L, Petersen S, Moiseenko V, Høyer M, Deasy J, Thor M. OC-0259: Spatial rectal dose-response for patient-reported leakage, obstruction, and urgency in prostate RT Radiotherapy and Oncology. 119: S119-S120. DOI: 10.1016/S0167-8140(16)31508-0  0.601
2016 Farjam R, Tyagi N, Veeraraghavan H, Apte A, Zakian K, Hunt M, Deasy J. OC-0155: MR-guided multi-atlas based synthetic CT for MR-only radiotherapy of head and neck cancer patients Radiotherapy and Oncology. 119. DOI: 10.1016/S0167-8140(16)31404-9  0.589
2015 Li G, Wei J, Huang H, Gaebler CP, Yuan A, Deasy JO. Automatic assessment of average diaphragm motion trajectory from 4DCT images through machine learning. Biomedical Physics & Engineering Express. 1. PMID 27110388 DOI: 10.1088/2057-1976/1/4/045015  0.307
2015 Fehr D, Veeraraghavan H, Wibmer A, Gondo T, Matsumoto K, Vargas HA, Sala E, Hricak H, Deasy JO. Automatic classification of prostate cancer Gleason scores from multiparametric magnetic resonance images. Proceedings of the National Academy of Sciences of the United States of America. 112: E6265-E6273. PMID 26578786 DOI: 10.1073/Pnas.1505935112  0.329
2015 Thor M, Olsson CE, Oh JH, Alsadius D, Pettersson N, Deasy JO, Steineck G. Radiation Dose to the Penile Structures and Patient-Reported Sexual Dysfunction in Long-Term Prostate Cancer Survivors. The Journal of Sexual Medicine. PMID 26564611 DOI: 10.1111/Jsm.13031  0.776
2015 Kerns SL, Kundu S, Oh JH, Singhal SK, Janelsins M, Travis LB, Deasy JO, Janssens AC, Ostrer H, Parliament M, Usmani N, Rosenstein BS. The Prediction of Radiotherapy Toxicity Using Single Nucleotide Polymorphism-Based Models: A Step Toward Prevention. Seminars in Radiation Oncology. 25: 281-91. PMID 26384276 DOI: 10.1016/J.Semradonc.2015.05.006  0.727
2015 van Luijk P, Pringle S, Deasy JO, Moiseenko VV, Faber H, Hovan A, Baanstra M, van der Laan HP, Kierkels RG, van der Schaaf A, Witjes MJ, Schippers JM, Brandenburg S, Langendijk JA, Wu J, et al. Sparing the region of the salivary gland containing stem cells preserves saliva production after radiotherapy for head and neck cancer. Science Translational Medicine. 7: 305ra147. PMID 26378247 DOI: 10.1126/Scitranslmed.Aac4441  0.527
2015 Thor M, Olsson CE, Oh JH, Petersen SE, Alsadius D, Bentzen L, Pettersson N, Muren LP, Waldenström AC, Høyer M, Steineck G, Deasy JO. Relationships between dose to the gastro-intestinal tract and patient-reported symptom domains after radiotherapy for localized prostate cancer. Acta Oncologica (Stockholm, Sweden). 54: 1326-34. PMID 26340136 DOI: 10.3109/0284186X.2015.1063779  0.777
2015 Thorek DL, Kramer RM, Chen Q, Jeong J, Lupu ME, Lee AM, Moynahan ME, Lowery M, Ulmert D, Zanzonico P, Deasy JO, Humm JL, Russell J. Reverse-Contrast Imaging and Targeted Radiation Therapy of Advanced Pancreatic Cancer Models. International Journal of Radiation Oncology, Biology, Physics. PMID 26238952 DOI: 10.1016/J.Ijrobp.2015.06.001  0.576
2015 Oh JH, Deasy JO. A literature mining-based approach for identification of cellular pathways associated with chemoresistance in cancer. Briefings in Bioinformatics. PMID 26220932 DOI: 10.1093/Bib/Bbv053  0.68
2015 Fontanella A, Jeong J, Sonke J, Bradley J, Chen C, Deasy J. TH-AB-304-03: Tumor Control Probability Applied to Lung Cancer: A Statistical Test of the Independence of Voxel Response. Medical Physics. 42: 3701. PMID 26129421 DOI: 10.1118/1.4926118  0.754
2015 Oh J, Sutton E, Veeraraghavan H, Apte A, Morris E, Deasy J. TU-AB-BRA-09: Radiomics and Radiogenomics for Breast Cancer Using Magnetic Resonance Imaging. Medical Physics. 42: 3588. PMID 26128814 DOI: 10.1118/1.4925514  0.676
2015 Tiwari P, Hong L, Apte A, Yang J, Mechalakos J, Mageras G, Hunt M, Chen Y, Deasy J. SU-E-T-502: Initial Results of a Comparison of Treatment Plans Produced From Automated Prioritized Planning Method and a Commercial Treatment Planning System. Medical Physics. 42: 3450. PMID 26128167 DOI: 10.1118/1.4924864  0.614
2015 Volpe T, Margiasso R, Saleh Z, Kuo L, Hong L, Ballangrud A, Gelblum D, Zinovoy M, Deasy J, Tang X. SU-E-T-18: A Comparison of Planning Techniques for Bilateral Reconstructed Chest Wall Patients Undergoing Whole Breast Irradiation. Medical Physics. 42: 3334. PMID 26127683 DOI: 10.1118/1.4924379  0.614
2015 Apte A, Veeraraghavan H, Oh J, Kijewski P, Deasy J. SU-E-J-253: The Radiomics Toolbox in the Computational Environment for Radiological Research (CERR). Medical Physics. 42: 3324. PMID 26127643 DOI: 10.1118/1.4924339  0.675
2015 Apte A, Veeraraghavan H, Tyagi N, Kijewski P, Deasy J. SU-E-J-213: Visualization of Scans and Metrics for Longitudinal Informatics. Medical Physics. 42: 3314. PMID 26127602 DOI: 10.1118/1.4924299  0.566
2015 Saleh Z, Thor M, Sharp G, Tang X, Volpe T, Margiasso R, Veeraraghavan H, Muren L, Deasy J. SU-E-J-95: A Novel Objective Approach to Identify Scan Outliers in Deformable Image Registration for Longitudinal Datasets. Medical Physics. 42: 3286. PMID 26127490 DOI: 10.1118/1.4924182  0.702
2015 Tang X, Saleh Z, Volpe T, Margiasso R, Lovelock D, Li X, Chan M, Hunt M, Deasy J. SU-E-J-63: Initial Validation of the Surface Beacon Transponder. Medical Physics. 42: 3278. PMID 26127455 DOI: 10.1118/1.4924150  0.538
2015 Deasy JO, Mayo CS, Orton CG. Treatment planning evaluation and optimization should be biologically and not dose/volume based. Medical Physics. 42: 2753-6. PMID 26127027 DOI: 10.1118/1.4916670  0.352
2015 Brown AM, Nagala S, McLean MA, Lu Y, Scoffings D, Apte A, Gonen M, Stambuk HE, Shaha AR, Tuttle RM, Deasy JO, Priest AN, Jani P, Shukla-Dave A, Griffiths J. Multi-institutional validation of a novel textural analysis tool for preoperative stratification of suspected thyroid tumors on diffusion-weighted MRI. Magnetic Resonance in Medicine : Official Journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine. PMID 25995019 DOI: 10.1002/Mrm.25743  0.532
2015 Julie DA, Oh JH, Apte AP, Deasy JO, Tom A, Wu AJ, Goodman KA. Predictors of acute toxicities during definitive chemoradiation using intensity-modulated radiotherapy for anal squamous cell carcinoma. Acta Oncologica (Stockholm, Sweden). 1-9. PMID 25984929 DOI: 10.3109/0284186X.2015.1043396  0.752
2015 Jeong J, Chen Q, Febo R, Yang J, Pham H, Xiong JP, Zanzonico PB, Deasy JO, Humm JL, Mageras GS. Adaptation, Commissioning, and Evaluation of a 3D Treatment Planning System for High-Resolution Small-Animal Irradiation. Technology in Cancer Research & Treatment. PMID 25948321 DOI: 10.1177/1533034615584522  0.568
2015 Son CH, Law E, Oh JH, Apte AP, Yang TJ, Riedel E, Wu AJ, Deasy JO, Goodman KA. Dosimetric Predictors of Radiation-Induced Vaginal Stenosis After Pelvic Radiation Therapy for Rectal and Anal Cancer. International Journal of Radiation Oncology, Biology, Physics. 92: 548-54. PMID 25936810 DOI: 10.1016/J.Ijrobp.2015.02.029  0.78
2015 Oberije C, De Ruysscher D, Houben R, van de Heuvel M, Uyterlinde W, Deasy JO, Belderbos J, Dingemans AM, Rimner A, Din S, Lambin P. A Validated Prediction Model for Overall Survival From Stage III Non-Small Cell Lung Cancer: Toward Survival Prediction for Individual Patients. International Journal of Radiation Oncology, Biology, Physics. 92: 935-44. PMID 25936599 DOI: 10.1016/J.Ijrobp.2015.02.048  0.446
2015 Rao SD, Saleh ZH, Setton J, Tam M, McBride SM, Riaz N, Deasy JO, Lee NY. Dose-volume factors correlating with trismus following chemoradiation for head and neck cancer. Acta Oncologica (Stockholm, Sweden). 1-6. PMID 25920361 DOI: 10.3109/0284186X.2015.1037864  0.622
2015 Sutton EJ, Oh JH, Dashevsky BZ, Veeraraghavan H, Apte AP, Thakur SB, Deasy JO, Morris EA. Breast cancer subtype intertumor heterogeneity: MRI-based features predict results of a genomic assay. Journal of Magnetic Resonance Imaging : Jmri. PMID 25850931 DOI: 10.1002/Jmri.24890  0.751
2015 Cella L, Oh JH, Deasy JO, Palma G, Liuzzi R, D'avino V, Conson M, Picardi M, Salvatore M, Pacelli R. Predicting radiation-induced valvular heart damage. Acta Oncologica (Stockholm, Sweden). 1-9. PMID 25800857 DOI: 10.3109/0284186X.2015.1016624  0.697
2015 Fanchon LM, Dogan S, Moreira AL, Carlin SA, Schmidtlein CR, Yorke E, Apte AP, Burger IA, Durack JC, Erinjeri JP, Maybody M, Schöder H, Siegelbaum RH, Sofocleous CT, Deasy JO, et al. Feasibility of in situ, high-resolution correlation of tracer uptake with histopathology by quantitative autoradiography of biopsy specimens obtained under 18F-FDG PET/CT guidance. Journal of Nuclear Medicine : Official Publication, Society of Nuclear Medicine. 56: 538-44. PMID 25722446 DOI: 10.2967/Jnumed.114.148668  0.529
2015 Chan MF, Cohen GN, Deasy JO. Qualitative evaluation of fiducial markers for radiotherapy imaging. Technology in Cancer Research & Treatment. 14: 298-304. PMID 25230715 DOI: 10.1177/1533034614547447  0.307
2015 Thor M, Olsson CE, Oh JH, Petersen SE, Alsadius D, Bentzen L, Pettersson N, Muren LP, Waldenström AC, Høyer M, Steineck G, Deasy JO. Relationships between dose to the gastro-intestinal tract and patient-reported symptom domains after radiotherapy for localized prostate cancer Acta Oncologica. DOI: 10.3109/0284186X.2015.1063779  0.568
2015 Fuente MIdl, Young R, Rubel J, Tisnado J, Briggs S, Holodny AI, Deasy J, DeAngelis LM, Cross J, Mellinghoff IK, Thakur S. Abstract 1498: Feasibility of 2-hydroxyglutarate 1H-MR spectroscopy for routine clinical glioma imaging Cancer Research. 75: 1498-1498. DOI: 10.1158/1538-7445.Am2015-1498  0.332
2015 Thor M, Jackson A, Steineck G, Zelefsky M, Karlsdottir A, Hoyer M, Liu M, Nasser N, Petersen S, Moiseenko V, Deasy J. TH-AB-304-01: Dose-Volume Relations for Late Rectal Bleeding in 1001 Patients From Five Prostate Cancer Cohorts Medical Physics. 42: 3700-3700. DOI: 10.1118/1.4926116  0.657
2015 Deasy J. WE-B-304-02: Treatment Planning Evaluation and Optimization Should Be Biologically and Not Dose/volume Based Medical Physics. 42: 3663-3664. DOI: 10.1118/1.4925901  0.378
2015 Deasy J. TU-G-303-01: Radiomics: Quantitative Imaging in the Service of Improved Treatment Decision Making Medical Physics. 42: 3632-3632. DOI: 10.1118/1.4925761  0.384
2015 Deasy J. TU-G-303-00: Radiomics: Advances in the Use of Quantitative Imaging Used for Predictive Modeling Medical Physics. 42: 3632-3632. DOI: 10.1118/1.4925760  0.385
2015 Thor M, Tyagi N, Deasy J. SU-E-J-264: Using Magnetic Resonance Imaging-Derived Features to Quantify Radiotherapy-Induced Normal Tissue Morbidity Medical Physics. 42: 3327-3327. DOI: 10.1118/1.4924350  0.621
2015 Thor M, Olsson CE, Oh JH, Alsadius D, Pettersson N, Steineck G, Deasy JO. Response and Rebuttal to Editorial Comment on "Radiation Dose to the Penile Structures and Patient-Reported Sexual Dysfunction in Long-Term Prostate Cancer Survivors" Journal of Sexual Medicine. 12: 2400-2400. DOI: 10.1111/Jsm.13066  0.7
2015 Cella L, Conson M, Palma G, Apte A, Deasy J, D'Avino V, Liuzzi R, Pacelli R. PO-0969: Cardiac motion and breathing effects: estimation of dosimetric uncertainties Radiotherapy and Oncology. 115: S513-S514. DOI: 10.1016/S0167-8140(15)40961-2  0.511
2015 Casares-Magaz O, Thor M, Muren L, Hopper A, Einck J, Cornell M, Knopp R, Deasy J, Moiseenko V. The need for dose re-calculation on cone-beam CTs in dose-response studies of pelvic normal tissues Radiotherapy and Oncology. 115: S508. DOI: 10.1016/S0167-8140(15)40953-3  0.618
2015 Thor M, Olsson C, Oh J, Elleberg Petersen S, Alsadius D, Hoyer M, Pettersson N, Bentzen L, Muren L, Deasy J, Steineck G. PO-0917: Predicting radiation-induced patient-reported genitorurinary toxicity in four prostate cancer cohorts Radiotherapy and Oncology. 115: S476-S477. DOI: 10.1016/S0167-8140(15)40909-0  0.703
2015 Pacelli R, Oh J, Deasy J, Conson M, D'Avino V, Picardi M, Pressello M, Boboc G, Battistini R, Donato V, Cella L. PO-0913: Machine learning-based prediction of late radiationinduced lung toxicity in Hodgkin's lymphoma survivors Radiotherapy and Oncology. 115: S473-S474. DOI: 10.1016/S0167-8140(15)40905-3  0.502
2015 Deasy J, Thor M, Olsson CE, Oh JH, Alsadius D, Pettersson N, Steineck G. PO-0908: Corpora cavernosa dose and patient-reported sexual dysfunction in prostate cancer radiotherapy Radiotherapy and Oncology. 115. DOI: 10.1016/S0167-8140(15)40900-4  0.695
2015 Olsson C, Thor M, Oh J, Elleberg Petersen S, Alsadius D, Høyer M, Pettersson N, Waldenström A, Bentzen L, Deasy J, Muren L, Steineck G. PO-0906: Is the anal sphincter a key structure for gastrointestinal toxicity in prostate cancer radiotherapy? Radiotherapy and Oncology. 115: S467-S468. DOI: 10.1016/S0167-8140(15)40898-9  0.68
2015 Thor M, Olsson CE, Oh JH, Hansen S, Petersen PM, Lindberg H, Kempel MM, Dysager L, Høyer M, Deasy JO, Bentzen L. PO-0732: Temporal patterns of patient-reported symptom groups after prostate cancer radiotherapy Radiotherapy and Oncology. 115. DOI: 10.1016/S0167-8140(15)40724-8  0.675
2015 Oberije C, Deasy J, Lievens Y, Belderbos J, Vandecasteele K, Uyterlinde W, Rimner A, Troost E, Lambin P. PO-0669: External validation of a survival model for stage III NSCLC: focus on similarities or differences? Radiotherapy and Oncology. 115: S326-S327. DOI: 10.1016/S0167-8140(15)40661-9  0.395
2015 Oh J, Kerns S, Ostrer H, Rosenstein B, Deasy J. OC-0082: A machine learning method demonstrates that a large number of SNPs contribute to clinical radiosensitivity Radiotherapy and Oncology. 115: S41-S42. DOI: 10.1016/S0167-8140(15)40082-9  0.475
2015 Volpe T, Margiasso R, Saleh Z, Kuo L, Hong L, Ballangrud A, Gelblum D, Remis M, Deasy J, Tang X. A Comparison of Three Planning Techniques for Bilateral Reconstructed Chest Wall Patients Undergoing Deep Inspiration Breath Hold (DIBH) Breast Irradiation International Journal of Radiation Oncology*Biology*Physics. 93: E616-E617. DOI: 10.1016/J.Ijrobp.2015.07.2121  0.552
2015 Zhang P, Rimner A, Yorke E, Hu J, Ravindranath B, Mageras G, Deasy J. Predicting Spatial Distribution of Residual Tumor Post Radiation Therapy Based on Pretreatment PET/CT for Locally Advanced Non-Small Cell Lung Cancer International Journal of Radiation Oncology*Biology*Physics. 93: E557. DOI: 10.1016/J.Ijrobp.2015.07.1974  0.366
2015 Thor M, Olsson C, Deasy J, Alsadius D, Pettersson N, Waldenström A, Steineck G, Oh J. Dose-Response Relationships for Four Gastrointestinal Symptom Groups in Prostate Cancer Radiation Therapy International Journal of Radiation Oncology*Biology*Physics. 93: S52. DOI: 10.1016/J.Ijrobp.2015.07.126  0.706
2015 Robinson C, Fontanella A, Abraham C, Oh J, Apte A, Mullen D, Deasy J. Validating a Mechanistic Tumor Control Probability (TCP) Model Applied to Non-Small Cell Lung Cancer (NSCLC) Brain Metastases Treated With Single-Fraction Radiosurgery (SRS) International Journal of Radiation Oncology*Biology*Physics. 93: S51. DOI: 10.1016/J.Ijrobp.2015.07.123  0.791
2014 Gay H, Oh J, Apte A, Dyk P, Mullen D, Eschen L, Fergus S, Chin R, Thorstad W, Deasy J. WE-E-BRE-09: Investigation of the Association Between Radiation-Induced Pain and Radiation Dose in Head and Neck Cancer Patients. Medical Physics. 41: 505-506. PMID 28038117 DOI: 10.1118/1.4889438  0.689
2014 Oh J, Apte A, Folkerts M, Kohutek Z, Wu A, Rimmer A, Lee N, Deasy J. WE-E-17A-03: FDG-PET-Based Radiomics to Predict Local Control and Survival Following Radiotherapy. Medical Physics. 41: 507-508. PMID 28038073 DOI: 10.1118/1.4889445  0.707
2014 Fontanella A, Robinson C, Zuniga A, Apte A, Thorstad W, Bradley J, Deasy J. SU-E-T-312: Test of the Generalized Tumor Dose (gTD) Model with An Independent Lung Tumor Dataset. Medical Physics. 41: 296. PMID 28037913 DOI: 10.1118/1.4888644  0.799
2014 Xie Y, Chen Y, Wickerhauser M, Deasy J. TU-C-17A-02: An Efficient Method for Making IMRT Treatment Planning Optimizations Results Robust Against Geometrical Uncertainties. Medical Physics. 41: 458. PMID 28037778 DOI: 10.1118/1.4889277  0.347
2014 Jeong J, Deasy JO. WE-D-BRE-04: Modeling Optimal Concurrent Chemotherapy Schedules. Medical Physics. 41: 493-494. PMID 28037652 DOI: 10.1118/1.4889394  0.565
2014 Liu M, Yorke E, Hunt M, Deasy J, Rimner A, Tyagi N. WE-G-BRD-02: Dynamic Contrast Enhanced (DCE) MRI for Response Assessment of Inoperable Lung Tumors for Patients Undergoing SBRT Treatment. Medical Physics. 41: 519. PMID 28037619 DOI: 10.1118/1.4889486  0.313
2014 Saleh Z, Thor M, Apte A, Sharp G, Muren L, Deasy J. SU-E-J-159: Intra-Patient Deformable Image Registration Uncertainties Quantified Using the Distance Discordance Metric. Medical Physics. 41: 193. PMID 28037600 DOI: 10.1118/1.4888212  0.751
2014 Tiwari P, Xie Y, Chen Y, Deasy J. SU-E-T-21: A Novel Sampling Algorithm to Reduce Intensity-Modulated Radiation Therapy (IMRT) Optimization Time. Medical Physics. 41: 226. PMID 28037538 DOI: 10.1118/1.4888351  0.319
2014 Thor M, Saleh Z, Oh JH, Apte A, Muren L, Deasy J. SU-E-J-62: Estimating Plausible Treatment Course Dose Distributions by Accounting for Registration Uncertainty and Organ Motion. Medical Physics. 41: 169. PMID 28037218 DOI: 10.1118/1.4888114  0.798
2014 Oh J, Deasy J. WE-D-BRE-05: Prediction of Late Radiation-Induced Proctitis in Prostate Cancer Patients Using Chromosome Aberration and Cell Proliferation Rate. Medical Physics. 41: 494. PMID 28037194 DOI: 10.1118/1.4889395  0.542
2014 Xie Y, Chen Y, Wickerhauser M, Deasy J. SU-E-T-379: Concave Approximations of Target Volume Dose Metrics for Intensity- Modulated Radiotherapy Treatment Planning. Medical Physics. 41: 312. PMID 28036905 DOI: 10.1118/1.4888712  0.355
2014 Apte A, Wang Y, Deasy J. SU-E-I-66: Radiomics and Image Registration Updates for the Computational Environment for Radiotherapy Research (CERR). Medical Physics. 41: 145. PMID 28036867 DOI: 10.1118/1.4888016  0.555
2014 Cella L, Palma G, Deasy JO, Oh JH, Liuzzi R, D'Avino V, Conson M, Pugliese N, Picardi M, Salvatore M, Pacelli R. Complication probability models for radiation-induced heart valvular dysfunction: do heart-lung interactions play a role? Plos One. 9: e111753. PMID 25360627 DOI: 10.1371/Journal.Pone.0111753  0.688
2014 Yang TJ, Oh JH, Apte A, Son CH, Deasy JO, Goodman KA. Clinical and dosimetric predictors of acute hematologic toxicity in rectal cancer patients undergoing chemoradiotherapy. Radiotherapy and Oncology : Journal of the European Society For Therapeutic Radiology and Oncology. 113: 29-34. PMID 25304718 DOI: 10.1016/J.Radonc.2014.09.002  0.757
2014 Jeong J, Deasy JO. Modeling the relationship between fluorodeoxyglucose uptake and tumor radioresistance as a function of the tumor microenvironment. Computational and Mathematical Methods in Medicine. 2014: 847162. PMID 25276223 DOI: 10.1155/2014/847162  0.497
2014 Oh JH, Deasy JO. Inference of radio-responsive gene regulatory networks using the graphical lasso algorithm. Bmc Bioinformatics. 15: S5. PMID 25077716 DOI: 10.1186/1471-2105-15-S7-S5  0.665
2014 Olsson C, Thor M, Liu M, Moissenko V, Petersen SE, Høyer M, Apte A, Deasy JO. Influence of image slice thickness on rectal dose-response relationships following radiotherapy of prostate cancer. Physics in Medicine and Biology. 59: 3749-59. PMID 24936956 DOI: 10.1088/0031-9155/59/14/3749  0.75
2014 Rao SS, Oh JH, Jackson A, Deasy JO. Dose escalation, not “new biology,” can account for the efficacy of stereotactic body radiation therapy with non-small cell lung cancer. In regard to Brown et al. International Journal of Radiation Oncology, Biology, Physics. 89: 692-3. PMID 24929171 DOI: 10.1016/J.Ijrobp.2014.03.027  0.725
2014 Jeong J, Setton JS, Lee NY, Oh JH, Deasy JO. Estimate of the impact of FDG-avidity on the dose required for head and neck radiotherapy local control. Radiotherapy and Oncology : Journal of the European Society For Therapeutic Radiology and Oncology. 111: 340-7. PMID 24833560 DOI: 10.1016/J.Radonc.2014.03.018  0.77
2014 Deasy JO, Muren LP. Advancing our quantitative understanding of radiotherapy normal tissue morbidity. Acta Oncologica (Stockholm, Sweden). 53: 577-9. PMID 24724930 DOI: 10.3109/0284186X.2014.907055  0.432
2014 Munck af Rosenschöld P, Desai NB, Oh JH, Apte A, Hunt M, Kalikstein A, Mechalakos J, Happersett L, Deasy JO, Zelefsky MJ. Modeling positioning uncertainties of prostate cancer external beam radiation therapy using pre-treatment data. Radiotherapy and Oncology : Journal of the European Society For Therapeutic Radiology and Oncology. 110: 251-5. PMID 24560753 DOI: 10.1016/J.Radonc.2013.12.010  0.78
2014 Sveistrup J, af Rosenschöld PM, Deasy JO, Oh JH, Pommer T, Petersen PM, Engelholm SA. Improvement in toxicity in high risk prostate cancer patients treated with image-guided intensity-modulated radiotherapy compared to 3D conformal radiotherapy without daily image guidance. Radiation Oncology (London, England). 9: 44. PMID 24495815 DOI: 10.1186/1748-717X-9-44  0.727
2014 Oh JH, Deasy JO. SITDEM: a simulation tool for disease/endpoint models of association studies based on single nucleotide polymorphism genotypes. Computers in Biology and Medicine. 45: 136-42. PMID 24480173 DOI: 10.1016/J.Compbiomed.2013.11.021  0.671
2014 Saleh ZH, Apte AP, Sharp GC, Shusharina NP, Wang Y, Veeraraghavan H, Thor M, Muren LP, Rao SS, Lee NY, Deasy JO. The distance discordance metric-a novel approach to quantifying spatial uncertainties in intra- and inter-patient deformable image registration. Physics in Medicine and Biology. 59: 733-46. PMID 24440838 DOI: 10.1088/0031-9155/59/3/733  0.772
2014 Ghadjar P, Zelefsky MJ, Spratt DE, Munck af Rosenschöld P, Oh JH, Hunt M, Kollmeier M, Happersett L, Yorke E, Deasy JO, Jackson A. Impact of dose to the bladder trigone on long-term urinary function after high-dose intensity modulated radiation therapy for localized prostate cancer. International Journal of Radiation Oncology, Biology, Physics. 88: 339-44. PMID 24411606 DOI: 10.1016/J.Ijrobp.2013.10.042  0.737
2014 Zhang P, Yorke E, Hu YC, Mageras G, Rimner A, Deasy JO. Predictive treatment management: incorporating a predictive tumor response model into robust prospective treatment planning for non-small cell lung cancer. International Journal of Radiation Oncology, Biology, Physics. 88: 446-52. PMID 24315562 DOI: 10.1016/J.Ijrobp.2013.10.038  0.38
2014 Tyagi N, Wengler K, Yorke E, Hunt M, Deasy J, Rimner A. WE-G-BRD-01: Diffusion Weighted MRI for Response Assessment of Inoperable Lung Tumors for Patients Undergoing SBRT Treatment Medical Physics. 41: 519-519. DOI: 10.1118/1.4889485  0.341
2014 Veeraraghavan H, Deasy J. SU-E-J-196: New Visualization Methods for Longitudinal MRI Registrations and Segmentations Medical Physics. 41: 202-202. DOI: 10.1118/1.4888249  0.303
2014 Olsson C, Thor M, Apte A, Liu M, Moissenko V, Deasy J. EP-1625: Influence of image slice thicknesses on rectal dose response relationships following prostate cancer radiotherapy Radiotherapy and Oncology. 111: S215. DOI: 10.1016/S0167-8140(15)31743-6  0.726
2014 Thor M, Olsson C, Petersen S, Alsadius D, Høyer M, Pettersson N, Bentzen L, Deasy J, Muren L, Steineck G. PO-0858: Identifying relationships between patient-reported outcomes in multiple radiotherapy cohorts Radiotherapy and Oncology. 111: S84-S85. DOI: 10.1016/S0167-8140(15)30976-2  0.574
2014 Mattes M, Ahsanuddin S, Apte A, Moshchinsky A, Rizk N, Foster A, Wu A, Ashamalla H, Deasy J, Weber W, Rimner A. The Ratio of Lymph Node to Primary Tumor SUV on PET/CT Accurately Predicts Nodal Malignancy in Non-Small Cell Lung Cancer International Journal of Radiation Oncology*Biology*Physics. 90: S212-S213. DOI: 10.1016/J.Ijrobp.2014.05.781  0.568
2014 Thor M, Olsson C, Oh J, Petersen S, Alsadius D, Høyer M, Pettersson N, Bentzen L, Deasy J, Muren L, Steineck G. Identifying Groups of Patient-Reported Gastro-Intestinal Symptoms Using Factor Analysis International Journal of Radiation Oncology*Biology*Physics. 90: S854. DOI: 10.1016/J.Ijrobp.2014.05.2446  0.642
2014 Jeong J, Deasy J. Investigation of Temporally Varying Fractionation in Radiation Therapy Using a Resource-Conservation Tumor Response Model International Journal of Radiation Oncology*Biology*Physics. 90: S850. DOI: 10.1016/J.Ijrobp.2014.05.2436  0.541
2014 Fanchon L, Apte A, Dogan S, Moreira A, Yorke E, Schmidtlein C, Carlin S, Hatt M, Solomon S, Deasy J, Visvikis D, Humm J, Kirov A. Spatially Accurate Ground Truth for PET Segmentation Verification From Biopsy Specimens Extracted Under PET/CT Guidance International Journal of Radiation Oncology*Biology*Physics. 90: S845. DOI: 10.1016/J.Ijrobp.2014.05.2423  0.53
2014 Saleh Z, Thorstad W, Apte A, Deasy J. Modeling Patient Reported Xerostomia-related Symptoms: Confirmation Of Mean Dose To The Contralateral Parotid Gland As A Key Predictor International Journal of Radiation Oncology*Biology*Physics. 90: S41. DOI: 10.1016/J.Ijrobp.2014.05.161  0.693
2014 Kohutek Z, Oh J, Apte A, Folkert M, Foster A, Wu A, Deasy J, Rimner A. Predictive Modeling of Outcomes Following SBRT for Non-Small Cell Lung Cancer using FDG-PET Image Statistical and Texture Characteristics International Journal of Radiation Oncology*Biology*Physics. 90: S24-S25. DOI: 10.1016/J.Ijrobp.2014.05.121  0.686
2013 Wang Y, Sharp G, Jackson A, Saleh Z, Apte A, Veeraraghavan H, Deasy J. SU-E-J-64: Landmark and ROI-Enhancement-Assisted Inter-Patient Deformable Registration of 3D Bladder CT Images. Medical Physics. 40: 164. PMID 28519860 DOI: 10.1118/1.4814276  0.679
2013 Wang Y, Folkert M, Saleh Z, Apte A, Sharp G, Lee N, Deasy J. SU-E-J-83: Evaluation of Landmark-Assisted Deformable Image Registration Technique On Inter-and Intra-Patient Head and Neck CT Imaging. Medical Physics. 40: 169. PMID 28519845 DOI: 10.1118/1.4814295  0.698
2013 Jeong J, Deasy JO. SU-D-137-07: Verification of the Method Used in Clinical Estimation of Alpha/beta Ratio, Using a Model Simulation Including Proliferation and Hypoxic Effects. Medical Physics. 40: 103. PMID 28519586 DOI: 10.1118/1.4814010  0.496
2013 Oh J, Bradley J, Deasy J. SU-D-137-01: Prediction of Multi-Categorical Radiation Pneumonitis Status in Lung Cancer Patients Using Machine Learning Approaches. Medical Physics. 40: 101-102. PMID 28519578 DOI: 10.1118/1.4814004  0.632
2013 Chan M, Cohen G, Deasy J. SU-D-141-07: Evaluation of Fiducial Markers for Radiotherapy Imaging. Medical Physics. 40: 110. PMID 28519568 DOI: 10.1118/1.4814038  0.316
2013 Jeong J, Chen Q, Febo R, Yang J, Pham H, Xiong J, Humm J, Deasy JO, Mageras G. SU-D-144-01: Implementation of a Clinical Treatment Planning System for Use with a Small Animal Irradiation System. Medical Physics. 40: 115-116. PMID 28519394 DOI: 10.1118/1.4814061  0.535
2013 Huang E, Folkert M, Bradley J, Apte A, Deasy J. TU-G-108-02: Left Atrium Dose-Volume Parameters Predict for Clinically Significant Radiation Pneumonitis. Medical Physics. 40: 453. PMID 28518774 DOI: 10.1118/1.4815451  0.81
2013 Saleh Z, Apte A, Sharp G, Wang Y, Deasy J. SU-C-WAB-07: Normalized Distance Discordance (DD): A Quantitative and Position-Specific Metric to Evaluate the Uncertainty of Inter-and Intra-Patient Deformable Registrations. Medical Physics. 40: 91. PMID 28518329 DOI: 10.1118/1.4813959  0.668
2013 Yang TJ, Oh JH, Son CH, Apte A, Deasy JO, Wu A, Goodman KA. Predictors of acute gastrointestinal toxicity during pelvic chemoradiotherapy in patients with rectal cancer. Gastrointestinal Cancer Research : Gcr. 6: 129-36. PMID 24312686  0.744
2013 Zelefsky MJ, Deasy JO. Improved long-term outcomes with IMRT: is it better technology or better physics? International Journal of Radiation Oncology, Biology, Physics. 87: 867-8. PMID 24267964 DOI: 10.1016/J.Ijrobp.2013.09.004  0.436
2013 Thor M, Apte A, Deasy JO, Karlsdóttir À, Moiseenko V, Liu M, Muren LP. Dose/volume-response relations for rectal morbidity using planned and simulated motion-inclusive dose distributions. Radiotherapy and Oncology : Journal of the European Society For Therapeutic Radiology and Oncology. 109: 388-93. PMID 24231236 DOI: 10.1016/J.Radonc.2013.10.021  0.722
2013 Jeong J, Shoghi KI, Deasy JO. Modelling the interplay between hypoxia and proliferation in radiotherapy tumour response. Physics in Medicine and Biology. 58: 4897-919. PMID 23787766 DOI: 10.1088/0031-9155/58/14/4897  0.55
2013 Lu Y, Jansen JF, Stambuk HE, Gupta G, Lee N, Gonen M, Moreira A, Mazaheri Y, Patel SG, Deasy JO, Shah JP, Shukla-Dave A. Comparing primary tumors and metastatic nodes in head and neck cancer using intravoxel incoherent motion imaging: a preliminary experience. Journal of Computer Assisted Tomography. 37: 346-52. PMID 23674004 DOI: 10.1097/Rct.0B013E318282D935  0.309
2013 Ghadjar P, Jackson A, Spratt DE, Oh JH, Munck af Rosenschöld P, Kollmeier M, Yorke E, Hunt M, Deasy JO, Zelefsky MJ. Patterns and predictors of amelioration of genitourinary toxicity after high-dose intensity-modulated radiation therapy for localized prostate cancer: implications for defining postradiotherapy urinary toxicity. European Urology. 64: 931-8. PMID 23522772 DOI: 10.1016/J.Eururo.2013.02.001  0.716
2013 Thor M, Apte A, Deasy JO, Muren LP. Statistical simulations to estimate motion-inclusive dose-volume histograms for prediction of rectal morbidity following radiotherapy. Acta Oncologica (Stockholm, Sweden). 52: 666-75. PMID 23205746 DOI: 10.3109/0284186X.2012.720382  0.732
2013 Yang TJ, Oh JH, Son C, Apte A, Deasy JO, Wu AJ, Goodman KA. Predictors of gastrointestinal toxicity during pelvic radiotherapy. Journal of Clinical Oncology. 31: 472-472. DOI: 10.1200/Jco.2013.31.4_Suppl.472  0.715
2013 Deasy J, Gevaert O, Aerts H. MO-D-WAB-01: How OMICs Is Going to Impact Research Topics for Medical Physicists Medical Physics. 40: 398-399. DOI: 10.1118/1.4815247  0.351
2013 Zuniga A, Apte A, Bradley J, Thorstad W, Deasy J. SU-E-T-244: Interfractional Motion Simulation of Head and Neck and Lung Patients Correlated to Treatment Outcome Medical Physics. 40: 260-260. DOI: 10.1118/1.4814679  0.668
2013 Apte AP, Wang Y, Deasy JO. SU-E-J-87: Improvements to the Computational Environment for Radiotherapy Research Medical Physics. 40: 170-170. DOI: 10.1118/1.4814299  0.585
2013 Oh JH, Stoyanova R, Deasy JO, Saleh Z, Buyyounouski MK, Price RA, Hu JJ, Pollack A. PO-0908: Identification of a single nucleotide polymorphism associated with sexual dysfunction in prostate cancer patients Radiotherapy and Oncology. 106. DOI: 10.1016/S0167-8140(15)33214-X  0.549
2013 Thor M, Apte A, Deasy J, Karlsdóttir A, Moiseenko V, Liu M, Muren L. OC-0548: Dose/volume-response relations for rectal morbidity using planned and motion-inclusive dose distributions Radiotherapy and Oncology. 106: S209-S210. DOI: 10.1016/S0167-8140(15)32854-1  0.719
2013 Rosenschöld PMa, Jackson A, Ghadjar P, Oh JH, Sveistrup J, Apte A, Engelholm SA, Deasy JO. PD-0135: The impact of radiation therapy technology and treatment protocol on high-risk prostate cancer outcome Radiotherapy and Oncology. 106. DOI: 10.1016/S0167-8140(15)32441-5  0.574
2013 Sveistrup J, Rosenschöld P, Deasy J, Oh J, Pommer T, Petersen P, Engelholm S. Improvement in Toxicity in High-Risk Prostate Cancer Patients Treated With Image-Guided Intensity Modulated Radiation Therapy Compared to Non-Image Guided Conformal Radiation Therapy International Journal of Radiation Oncology*Biology*Physics. 87: S348-S349. DOI: 10.1016/J.Ijrobp.2013.06.915  0.574
2013 Rothenstein D, Oh J, Apte A, Tom A, Deasy J, Goodman K. Predictors of Outcome and Toxicities of Definitive Chemoradiation With Intensity Modulated Radiation Therapy for Anal Cancer International Journal of Radiation Oncology*Biology*Physics. 87: S335. DOI: 10.1016/J.Ijrobp.2013.06.882  0.685
2013 Yang T, Oh J, Son C, Apte A, Wu A, Deasy J, Goodman K. Impact of Clinical and Dosimetric Factors on Weekly Toxicity Scores During Pelvic Radiation Therapy for Rectal Cancer International Journal of Radiation Oncology*Biology*Physics. 87: S334. DOI: 10.1016/J.Ijrobp.2013.06.878  0.695
2013 Jeong J, Setton J, Romesser P, Lee N, Deasy J. An Estimation of the Radiation Therapy Dose–Response Differences Between FDG-Avid Versus FDG-Nonavid Head-and-Neck Tumors International Journal of Radiation Oncology*Biology*Physics. 87: S94-S95. DOI: 10.1016/J.Ijrobp.2013.06.245  0.532
2013 Zhang P, Yah R, Yorke E, Hu Y, Foster A, Mageras G, Wu A, Deasy J, Rimner A. Incorporating the Prediction of Residual Tumor Location Into Prospective Dose Painting for Locally-Advanced Non-Small Cell Lung Cancer International Journal of Radiation Oncology*Biology*Physics. 87: S699. DOI: 10.1016/J.Ijrobp.2013.06.1853  0.369
2013 Deasy J, Zuniga A, Apte A, Thorstad W, Bradley J. A New Tumor Control Probability Model Fitted to Head-and-Neck and Lung Local Control Data and Resulting Implications for the Impact of Dose Heterogeneity International Journal of Radiation Oncology*Biology*Physics. 87: S694. DOI: 10.1016/J.Ijrobp.2013.06.1841  0.663
2012 Apte A, Wang Y, Oh J, Saleh Z, Deasy J. SU-E-J-92: CERR: New Tools to Analyze Image Registration Precision. Medical Physics. 39: 3673. PMID 28519788 DOI: 10.1118/1.4734928  0.735
2012 Tiwari P, Xie Y, Chen Y, Apte A, Deasy J. SU-E-T-620: Computational Boundary Sampling to Accelerate IMRT Optimization. Medical Physics. 39: 3848-3849. PMID 28517509 DOI: 10.1118/1.4735710  0.573
2012 Oh J, Wang Y, Apte A, Deasy J. SU-E-T-259: A Statistical and Machine Learning-Based Tool for Modeling and Visualization of Radiotherapy Treatment Outcomes. Medical Physics. 39: 3763. PMID 28517357 DOI: 10.1118/1.4735326  0.666
2012 Oh JH, Wong HP, Wang X, Deasy JO. A bioinformatics filtering strategy for identifying radiation response biomarker candidates. Plos One. 7: e38870. PMID 22768051 DOI: 10.1371/Journal.Pone.0038870  0.689
2012 Jagsi R, Bekelman JE, Brawley OW, Deasy JO, Le QT, Michalski JM, Movsas B, Thomas CR, Lawton CA, Lawrence TS, Hahn SM. A research agenda for radiation oncology: results of the radiation oncology institute's comprehensive research needs assessment. International Journal of Radiation Oncology, Biology, Physics. 84: 318-22. PMID 22436790 DOI: 10.1016/J.Ijrobp.2011.11.076  0.302
2012 Allen Li X, Alber M, Deasy JO, Jackson A, Ken Jee KW, Marks LB, Martel MK, Mayo C, Moiseenko V, Nahum AE, Niemierko A, Semenenko VA, Yorke ED. The use and QA of biologically related models for treatment planning: short report of the TG-166 of the therapy physics committee of the AAPM. Medical Physics. 39: 1386-409. PMID 22380372 DOI: 10.1118/1.3685447  0.37
2012 Kibel AS, Ciezki JP, Klein EA, Reddy CA, Lubahn JD, Haslag-Minoff J, Deasy JO, Michalski JM, Kallogjeri D, Piccirillo JF, Rabah DM, Yu C, Kattan MW, Stephenson AJ. Survival among men with clinically localized prostate cancer treated with radical prostatectomy or radiation therapy in the prostate specific antigen era. The Journal of Urology. 187: 1259-65. PMID 22335870 DOI: 10.1016/J.Juro.2011.11.084  0.322
2012 Huang EX, Bradley JD, El Naqa I, Hope AJ, Lindsay PE, Bosch WR, Matthews JW, Sause WT, Graham MV, Deasy JO. Modeling the risk of radiation-induced acute esophagitis for combined Washington University and RTOG trial 93-11 lung cancer patients. International Journal of Radiation Oncology, Biology, Physics. 82: 1674-9. PMID 21658856 DOI: 10.1016/J.Ijrobp.2011.02.052  0.783
2012 Moiseenko V, Wu J, Hovan A, Saleh Z, Apte A, Deasy JO, Harrow S, Rabuka C, Muggli A, Thompson A. Treatment planning constraints to avoid xerostomia in head-and-neck radiotherapy: an independent test of QUANTEC criteria using a prospectively collected dataset. International Journal of Radiation Oncology, Biology, Physics. 82: 1108-14. PMID 21640505 DOI: 10.1016/J.Ijrobp.2011.04.020  0.722
2012 Zuniga A, Thorstad W, Bradley J, Deasy J. TH‐C‐213AB‐08: The Cell‐Kill‐Based Equivalent Uniform Dose (cEUD) Predictor: A Modification to Account for Increasing Radioresistance with Increasing Tumor Volume Medical Physics. 39: 3995-3995. DOI: 10.1118/1.4736297  0.51
2012 Oh J, Apte A, Robinson C, Bradley J, Deasy J. TH-C-213AB-02: Improved Predictive Modeling of Radiation Pneumonitis in Lung Cancer Patients Using Machine Learning Techniques Medical Physics. 39: 3993-3993. DOI: 10.1118/1.4736291  0.66
2012 Deasy J, Saleh Z, Apte A. TU-C-BRA-01: Predicting Complication Probabilities Beyond the Dose-Volume Histogram: Dose-Mapping to Identify Critical Dose-Volume Risk Factors Medical Physics. 39: 3901-3901. DOI: 10.1118/1.4735925  0.727
2012 Saleh Z, Rao S, Apte A, Sharp G, Lee N, Deasy J. Pd-0299 Correlations Of Spatial Dose Distribution With Trismus In A Cohort Of Head And Neck Radiotherapy Patients Radiotherapy and Oncology. 103. DOI: 10.1016/S0167-8140(12)70638-2  0.566
2012 van Luijk P, Pringle S, Deasy J, Moiseenko V, Faber H, van der Laan H, Brandenburg S, Langendijk J, Wu J, Coppes R. OC-0167 STEM CELL SPARING RADIOTHERAPY OF HEAD AND NECK CANCER TO PRESERVE SALIVARY GLAND FUNCTION Radiotherapy and Oncology. 103: S64. DOI: 10.1016/S0167-8140(12)70506-6  0.473
2012 Yang T, Oh J, Apte A, Son C, Deasy J, Goodman K. Predictors of Hematologic Toxicity During Pelvic Radiation Therapy International Journal of Radiation Oncology*Biology*Physics. 84: S346. DOI: 10.1016/J.Ijrobp.2012.07.911  0.573
2012 Son C, Law E, Oh J, Apte AP, Yang TJ, Deasy JO, Goodman KA. Dosimetric Predictors of Radiation-induced Vaginal Stenosis in Rectal and Anal Cancer Patients International Journal of Radiation Oncology Biology Physics. 84. DOI: 10.1016/J.Ijrobp.2012.07.345  0.692
2012 Jackson A, Wang T, Riaz N, Chang J, Yu E, Ho F, Apte A, Young R, Deasy J, Lee N. Correlation of the Dose Delivered to the Nausea Center With Acute Onset of Nausea and Vomiting in Oropharynx Cancer Patients Treated With Chemoradiation International Journal of Radiation Oncology*Biology*Physics. 84: S752-S753. DOI: 10.1016/J.Ijrobp.2012.07.2014  0.605
2012 Yang T, Oh J, Apte A, Son C, Deasy J, Goodman K. Risk Factors Associated With Sacral Fractures After Pelvic Radiation Therapy for Rectal Cancer International Journal of Radiation Oncology*Biology*Physics. 84: S647. DOI: 10.1016/J.Ijrobp.2012.07.1727  0.667
2012 Oh J, Riaz N, Jaffray S, Estilo C, Lee R, Katsoulakis E, Apte A, Huryn J, Lee N, Deasy J. A Novel Modeling for Salivary Toxicity Based on Salivary Flow Recovery Over Time in Head-and-Neck Cancer Patients Treated With Radiation Therapy International Journal of Radiation Oncology*Biology*Physics. 84: S503-S504. DOI: 10.1016/J.Ijrobp.2012.07.1342  0.689
2012 Deasy J, Robinson C, Huang E, Molotievschi A, Bradley J. Independent Test of a Model to Predict Radiation Pneumonitis After Definitive Radiation Therapy for Locally Advanced Non-small Cell Lung Cancer: Heart Irradiation is (Again) a Statistically Significant Risk Factor International Journal of Radiation Oncology*Biology*Physics. 84: S32. DOI: 10.1016/J.Ijrobp.2012.07.087  0.726
2012 Rao S, Saleh Z, Tam M, Apte A, Sharp G, Setton J, Nancy L, Deasy J. A Novel Voxel-based Analysis of the Development of Trismus Following Chemoradiation for Oropharyngeal (OPC) Cancer International Journal of Radiation Oncology*Biology*Physics. 84: S30-S31. DOI: 10.1016/J.Ijrobp.2012.07.084  0.692
2011 Yang D, Brame S, El Naqa I, Aditya A, Wu Y, Goddu SM, Mutic S, Deasy JO, Low DA. Technical note: DIRART--A software suite for deformable image registration and adaptive radiotherapy research. Medical Physics. 38: 67-77. PMID 21361176 DOI: 10.1118/1.3521468  0.313
2011 Oh JH, Craft J, Al Lozi R, Vaidya M, Meng Y, Deasy JO, Bradley JD, El Naqa I. A Bayesian network approach for modeling local failure in lung cancer. Physics in Medicine and Biology. 56: 1635-51. PMID 21335651 DOI: 10.1088/0031-9155/56/6/008  0.759
2011 Oh JH, Craft JM, Townsend R, Deasy JO, Bradley JD, El Naqa I. A bioinformatics approach for biomarker identification in radiation-induced lung inflammation from limited proteomics data. Journal of Proteome Research. 10: 1406-15. PMID 21226504 DOI: 10.1021/Pr101226Q  0.747
2011 Huang EX, Hope AJ, Lindsay PE, Trovo M, El Naqa I, Deasy JO, Bradley JD. Heart irradiation as a risk factor for radiation pneumonitis. Acta Oncologica (Stockholm, Sweden). 50: 51-60. PMID 20874426 DOI: 10.3109/0284186X.2010.521192  0.776
2011 Chawla A, Marks L, Deasy J, Bradley J, Das S. WE-G-BRA-01: A Framework to Determine Risk of Pneumonitis Following Radiotherapy for Lung Cancer Medical Physics. 38: 3826-3826. DOI: 10.1118/1.3613406  0.464
2011 Marks L, Haken RT, Yorke E, Bentzen S, Deasy J, Constine L, Jackson A, Eisbruch A. WE‐E‐BRA‐03: Therapy Symposium: A Clinician's View of Quantec Medical Physics. 38: 3815-3816. DOI: 10.1118/1.3613367  0.385
2011 Deasy J, Bentzen S, Constine L, Eisbruch A, Jackson A, Marks L, Haken RT, Yorke E. WE-E-BRA-02: Methodological Issues and Key Results in the QUANTEC 2010 Review of Radiation-Induced Normal Tissue Toxicity Medical Physics. 38: 3815-3815. DOI: 10.1118/1.3613366  0.317
2011 Thor M, Apte A, Deasy J, Væth M, Muren L. SU‐E‐T‐45: Rectal Motion Simulations ‐ Exploring the Associations with Rectal Toxicity Medical Physics. 38: 3495-3496. DOI: 10.1118/1.3611996  0.72
2011 Zuniga AA, Thorstad W, oh JH, Apte AP, Bradley J, Deasy JO. SU-E-T-38: Validating the Use of a New Tumor Irradiation Quality Metric for Lung and Head and Neck Tumors: Total Clonogen Survival Medical Physics. 38: 3494-3494. DOI: 10.1118/1.3611989  0.672
2011 Oh J, Zuniga A, Thorstad W, Bradley J, Deasy J. SU-E-T-01: Tumor Control Probability Models Derived Using Machine Learning for Head and Neck and Lung Tumors including a New Metric, Total Clonogen Survival (TCS) Medical Physics. 38: 3485-3485. DOI: 10.1118/1.3611951  0.549
2011 Thor M, Apte A, Deasy J, Vasth M, Muren L. 2038 POSTER Investigating the Associations Between Late Rectal Morbidity and Simulated Rectal Motion European Journal of Cancer. 47: S199-S200. DOI: 10.1016/S0959-8049(11)70996-0  0.663
2011 Thor M, Apte A, Deasy J, Muren L. INTERNAL ORGAN MOTION AND ITS INFLUENCE ON MORBIDITY PREDICTION: THE RECTUM AS EXAMPLE Radiotherapy and Oncology. 98: S30. DOI: 10.1016/S0167-8140(11)71774-1  0.669
2011 Marks LB, Deasy J, Yorke E, Haken RT, Jackson A, Bentzen S, Constine L, Eisbruch A. Relating Three Dimensional Dose/Volume Data To Clinical Outcomes: An Overview Of The Quantec Effort Radiotherapy and Oncology. 98. DOI: 10.1016/S0167-8140(11)71724-8  0.333
2011 Oh J, Craft J, Al-Lozi R, Vaidya M, Meng Y, Bradley J, Deasy J, El Naqa I. 1512 poster INTEGRATING DOSIMETRY AND BIOMARKERS VIA A BAYESIAN NETWORK FOR PREDICTING RADIOTHERAPY RESPONSE IN LUNG CANCER Radiotherapy and Oncology. 99: S563. DOI: 10.1016/S0167-8140(11)71634-6  0.489
2011 Muren LP, Thor M, Apte A, Hysing LB, Alber M, Söhn M, Thörnqvist S, Petersen JB, Hoyer M, Bentzen L, Karlsdottir A, Deasy J. 506 speaker INTERNAL MOTION AND ITS INFLUENCE ON MORBIDITY PREDICTION FOR PELVIC ORGANS Radiotherapy and Oncology. 99. DOI: 10.1016/S0167-8140(11)70628-4  0.669
2011 Zuniga A, Hope A, Lindsay P, Bradley J, Deasy J. 452 poster TESTING WHETHER THE CELL-KILL-BASED EQUIVALENT UNIFORM DOSE (CEUD) FORMULA PREDICTS LOCAL CONTROL FOR NON-SMALL-CELL LUNG CANCER Radiotherapy and Oncology. 99: S182. DOI: 10.1016/S0167-8140(11)70574-6  0.616
2011 Saleh Z, Thorstad W, Apte A, Deasy J. 134 oral XEROSTOMIA PATIENT REPORTED OUTCOMES ARE A LINEAR FUNCTION OF CONTRALATERAL PAROTID GLAND MEAN DOSE Radiotherapy and Oncology. 99. DOI: 10.1016/S0167-8140(11)70256-0  0.571
2011 Thor M, Apte A, Deasy J, Muren L. 99 oral APPROACHING THE TRUE' DVH TO IMPROVE PREDICTION OF TOXICITY – A RECTAL MOTION SIMULATION STUDY Radiotherapy and Oncology. 99: S36-S37. DOI: 10.1016/S0167-8140(11)70222-5  0.678
2011 Thorstad W, Zuniga A, Haughey B, Nussenbaum B, Adkins D, Deasy J. Cell-kill Based Equivalent Uniform Dose Predicts Local Control in Head and Neck Squamous Cell Carcinoma International Journal of Radiation Oncology*Biology*Physics. 81: S149. DOI: 10.1016/J.Ijrobp.2011.06.305  0.309
2011 Oh J, Deasy JO, Stoyanova R, Saleh Z, Buyyounouski M, Wong HP, Apte AP, Price RA, Hu J, Pollack A. Identification of a Single Nucleotide Polymorphism Related to Late Toxicity in a Randomized Hypofractionation Trial for Prostate Cancer International Journal of Radiation Oncology Biology Physics. 81. DOI: 10.1016/J.Ijrobp.2011.06.1650  0.732
2011 Rao S, Saleh Z, Fong B, Setton J, Caria N, Romanyshyn J, Wolden S, Zelefsky M, Deasy J, Lee N. Dosimetric Evaluation of Trismus in Head and Neck Cancer Patients following Intensity Modulated Radiation Therapy and Chemotherapy International Journal of Radiation Oncology*Biology*Physics. 81: S75-S76. DOI: 10.1016/J.Ijrobp.2011.06.151  0.35
2011 Chawla A, Marks L, Deasy J, Bradley J, Das S. Testing a Framework to Predict the Risk of Lung Pneumonitis after Thoracic Radiotherapy International Journal of Radiation Oncology*Biology*Physics. 81: S803. DOI: 10.1016/J.Ijrobp.2011.06.1408  0.467
2011 El Naqa I, Bradley J, Oh J, Craft J, Deasy J. Investigating Alpha-2-Macroglobulin and Its Dosimetric Interactions for Predicting Radiation Pneumonitis International Journal of Radiation Oncology*Biology*Physics. 81: S756-S757. DOI: 10.1016/J.Ijrobp.2011.06.1259  0.603
2010 Dehing-Oberije C, De Ruysscher D, Petit S, Van Meerbeeck J, Vandecasteele K, De Neve W, Dingemans AM, El Naqa I, Deasy J, Bradley J, Huang E, Lambin P. Development, external validation and clinical usefulness of a practical prediction model for radiation-induced dysphagia in lung cancer patients. Radiotherapy and Oncology : Journal of the European Society For Therapeutic Radiology and Oncology. 97: 455-61. PMID 21084125 DOI: 10.1016/J.Radonc.2010.09.028  0.783
2010 Liu M, Moiseenko V, Agranovich A, Karvat A, Kwan W, Saleh ZH, Apte AA, Deasy JO. Normal Tissue Complication Probability (NTCP) modeling of late rectal bleeding following external beam radiotherapy for prostate cancer: A Test of the QUANTEC-recommended NTCP model. Acta Oncologica (Stockholm, Sweden). 49: 1040-4. PMID 20831493 DOI: 10.3109/0284186X.2010.509736  0.71
2010 Naqa IE, Deasy JO, Mu Y, Huang E, Hope AJ, Lindsay PE, Apte A, Alaly J, Bradley JD. Datamining approaches for modeling tumor control probability. Acta Oncologica (Stockholm, Sweden). 49: 1363-73. PMID 20192878 DOI: 10.3109/02841861003649224  0.792
2010 Werner-Wasik M, Yorke E, Deasy J, Nam J, Marks LB. Radiation dose-volume effects in the esophagus. International Journal of Radiation Oncology, Biology, Physics. 76: S86-93. PMID 20171523 DOI: 10.1016/J.Ijrobp.2009.05.070  0.41
2010 Marks LB, Bentzen SM, Deasy JO, Kong FM, Bradley JD, Vogelius IS, El Naqa I, Hubbs JL, Lebesque JV, Timmerman RD, Martel MK, Jackson A. Radiation dose-volume effects in the lung. International Journal of Radiation Oncology, Biology, Physics. 76: S70-6. PMID 20171521 DOI: 10.1016/J.Ijrobp.2009.06.091  0.533
2010 Deasy JO, Moiseenko V, Marks L, Chao KS, Nam J, Eisbruch A. Radiotherapy dose-volume effects on salivary gland function. International Journal of Radiation Oncology, Biology, Physics. 76: S58-63. PMID 20171519 DOI: 10.1016/J.Ijrobp.2009.06.090  0.389
2010 Bentzen SM, Constine LS, Deasy JO, Eisbruch A, Jackson A, Marks LB, Ten Haken RK, Yorke ED. Quantitative Analyses of Normal Tissue Effects in the Clinic (QUANTEC): an introduction to the scientific issues. International Journal of Radiation Oncology, Biology, Physics. 76: S3-9. PMID 20171515 DOI: 10.1016/J.Ijrobp.2009.09.040  0.387
2010 Jackson A, Marks LB, Bentzen SM, Eisbruch A, Yorke ED, Ten Haken RK, Constine LS, Deasy JO. The lessons of QUANTEC: recommendations for reporting and gathering data on dose-volume dependencies of treatment outcome. International Journal of Radiation Oncology, Biology, Physics. 76: S155-60. PMID 20171512 DOI: 10.1016/J.Ijrobp.2009.08.074  0.361
2010 Deasy JO, Bentzen SM, Jackson A, Ten Haken RK, Yorke ED, Constine LS, Sharma A, Marks LB. Improving normal tissue complication probability models: the need to adopt a "data-pooling" culture. International Journal of Radiation Oncology, Biology, Physics. 76: S151-4. PMID 20171511 DOI: 10.1016/J.Ijrobp.2009.06.094  0.331
2010 Bentzen SM, Parliament M, Deasy JO, Dicker A, Curran WJ, Williams JP, Rosenstein BS. Biomarkers and surrogate endpoints for normal-tissue effects of radiation therapy: the importance of dose-volume effects. International Journal of Radiation Oncology, Biology, Physics. 76: S145-50. PMID 20171510 DOI: 10.1016/J.Ijrobp.2009.08.076  0.35
2010 Jaffray DA, Lindsay PE, Brock KK, Deasy JO, Tomé WA. Accurate accumulation of dose for improved understanding of radiation effects in normal tissue. International Journal of Radiation Oncology, Biology, Physics. 76: S135-9. PMID 20171508 DOI: 10.1016/J.Ijrobp.2009.06.093  0.418
2010 Roach M, Nam J, Gagliardi G, El Naqa I, Deasy JO, Marks LB. Radiation dose-volume effects and the penile bulb. International Journal of Radiation Oncology, Biology, Physics. 76: S130-4. PMID 20171507 DOI: 10.1016/J.Ijrobp.2009.04.094  0.383
2010 Michalski JM, Gay H, Jackson A, Tucker SL, Deasy JO. Radiation dose-volume effects in radiation-induced rectal injury. International Journal of Radiation Oncology, Biology, Physics. 76: S123-9. PMID 20171506 DOI: 10.1016/J.Ijrobp.2009.03.078  0.419
2010 Marks LB, Yorke ED, Jackson A, Ten Haken RK, Constine LS, Eisbruch A, Bentzen SM, Nam J, Deasy JO. Use of normal tissue complication probability models in the clinic. International Journal of Radiation Oncology, Biology, Physics. 76: S10-9. PMID 20171502 DOI: 10.1016/J.Ijrobp.2009.07.1754  0.337
2010 Li X, Deasy J, Mayo C, Alber M. MO-A-204B-02: Efficient Outcomes-Driven IMRT Treatment Planning Using Commercial Treatment Planning Systems Medical Physics. 37: 3334-3335. DOI: 10.1118/1.3469037  0.363
2010 Jeong J, Deasy J. SU-GG-T-490: Estimation of Boost Dose Required to Compensate for High FDG Uptake in Head and Neck Squamous Cell Carcinoma Medical Physics. 37: 3299-3299. DOI: 10.1118/1.3468888  0.36
2010 Huang E, Bradley J, El Naqa I, Pesce L, Deasy J. SU-GG-T-444: Normal Tissue Complication Probability (NTCP) Modeling Using Self-Organizing Map (SOM) Medical Physics. 37: 3288-3288. DOI: 10.1118/1.3468842  0.745
2010 Davidson S, Kry S, Cui J, Deasy J, Ibbott G, Vicic M, White R, Followill D. SU-GG-T-375: A Custom-Developed Method for Accurate Dose Recalculation of Patient Plans Entered into Clinical Trials Medical Physics. 37: 3272-3272. DOI: 10.1118/1.3468772  0.397
2010 Lee E, Cha K, Deasy J, Hamilton C. SU-GG-T-128: Handling Multiple Clinical Objectives in Intensity-Modulated Radiation Therapy Treatment Planning Medical Physics. 37: 3214-3214. DOI: 10.1118/1.3468517  0.357
2010 Apte A, Al-Lozi R, Pereira G, Matthew J, Mansur D, Deasy J, El Naqa I. SU-GG-J-114: A Graphical Tool for Assessing Margin Definition from Daily Deformations Medical Physics. 37: 3171-3171. DOI: 10.1118/1.3468338  0.348
2010 Oh JH, Craft J, Al-Lozi R, Vaidya M, Meng Y, Deasy JO, Bradley JD, El Naqa I. Predicting local failure in lung cancer using Bayesian networks Proceedings - 9th International Conference On Machine Learning and Applications, Icmla 2010. 735-739. DOI: 10.1109/ICMLA.2010.112  0.398
2010 Schiller TW, Chen Y, El Naqa I, Deasy JO. Modeling radiation-induced lung injury risk with an ensemble of support vector machines Neurocomputing. 73: 1861-1867. DOI: 10.1016/J.Neucom.2009.09.023  0.344
2010 Ma D, Esthappan J, El Naqa I, Zhu J, Raptis C, Yang D, Apte A, Deasy J, Grigsby P. Apparent Diffusion Coefficient Values in Diffusion Weighted Imaging is Correlated with Disease Progression in Cervical Cancer Patients International Journal of Radiation Oncology*Biology*Physics. 78: S399. DOI: 10.1016/J.Ijrobp.2010.07.940  0.535
2010 Oh J, Craft J, Al-Lozi R, Vaidya M, Meng Y, Deasy J, Bradley J, El Naqa I. A Bayesian Network Approach for Predicting Local Failure in Lung Cancer using Physical and Biological Variables International Journal of Radiation Oncology*Biology*Physics. 78: S659-S660. DOI: 10.1016/J.Ijrobp.2010.07.1536  0.473
2010 Liu M, Moiseenko V, Agranovich A, Karvat A, Kwan W, Saleh Z, Apte A, Deasy J. Normal Tissue Complication Probability (NTCP) Modeling of Late Rectal Bleeding following External Beam Radiotherapy for Prostate Cancer: A Test of the QUANTEC-favored Model International Journal of Radiation Oncology*Biology*Physics. 78: S45-S46. DOI: 10.1016/J.Ijrobp.2010.07.141  0.582
2010 Craft J, Oh J, Ju M, Bradley J, Deasy J, El Naqa I. Quantitative Mass Spectroscopy and the Identification of Alpha2macroglobulin as a Potential Biomarker for Radiation Pneumonitis International Journal of Radiation Oncology*Biology*Physics. 78: S498-S499. DOI: 10.1016/J.Ijrobp.2010.07.1166  0.462
2009 El Naqa I, Grigsby P, Apte A, Kidd E, Donnelly E, Khullar D, Chaudhari S, Yang D, Schmitt M, Laforest R, Thorstad W, Deasy JO. Exploring feature-based approaches in PET images for predicting cancer treatment outcomes. Pattern Recognition. 42: 1162-1171. PMID 20161266 DOI: 10.1016/J.Patcog.2008.08.011  0.606
2009 Spencer SJ, Bonnin DA, Deasy JO, Bradley JD, El Naqa I. Bioinformatics methods for learning radiation-induced lung inflammation from heterogeneous retrospective and prospective data. Journal of Biomedicine & Biotechnology. 2009: 892863. PMID 19704920 DOI: 10.1155/2009/892863  0.557
2009 El Naqa I, Bradley JD, Lindsay PE, Hope AJ, Deasy JO. Predicting radiotherapy outcomes using statistical learning techniques. Physics in Medicine and Biology. 54: S9-S30. PMID 19687564 DOI: 10.1088/0031-9155/54/18/S02  0.591
2009 Yang D, Chaudhari SR, Goddu SM, Pratt D, Khullar D, Deasy JO, El Naqa I. Deformable registration of abdominal kilovoltage treatment planning CT and tomotherapy daily megavoltage CT for treatment adaptation. Medical Physics. 36: 329-38. PMID 19291972 DOI: 10.1118/1.3049594  0.345
2009 Yang D, Zheng J, Nofal A, Deasy J, Naqa IME. Techniques and software tool for 3D multimodality medical image segmentation Journal of Radiation Oncology. 1: 1-22. DOI: 10.3933/Jroi-1-1-4  0.322
2009 Apte A, Khullar D, Wu Y, Deasy J. TH-D-BRD-01: New Developments in The Computational Environment for Radiotherapy Research (CERR) Software System Medical Physics. 36: 2807-2807. DOI: 10.1118/1.3182655  0.593
2009 El Naqa I, Bradley J, Deasy J. WE-D-303A-08: Nonlinear Kernels as a Visual Analytics Tool for Radiotherapy Treatment Outcomes Medical Physics. 36: 2777-2777. DOI: 10.1118/1.3182535  0.497
2009 Huang E, Bradley J, Naqa Ie, Trovo M, Deasy J. TU-C-BRB-08: Validating Normal Tissue Complication Probability Models: A Study of Generalizability and Datapooling for Predictive Radiation Pneumonitis Modeling Medical Physics. 36: 2723-2723. DOI: 10.1118/1.3182333  0.747
2009 Apte A, Deasy J, Bosch W, Naqa IE. MO-FF-A3-05: Tools and Methods for Consensus Generation From Experts' Contours for Radiotherapy Structure Definition Medical Physics. 36: 2712-2712. DOI: 10.1118/1.3182293  0.599
2009 Huang E, Lindsay P, Hope A, El Naqa I, Bradley J, Deasy J. SU-FF-T-501: The Effect of Monte Carlo-Based Dose Calculations On Tumor Control Probability Modeling Medical Physics. 36: 2638-2638. DOI: 10.1118/1.3181999  0.786
2009 Haken RT, Bentzen S, Constine L, Eisbruch A, Deasy J, Jackson A, Marks L, Yorke E. SU-FF-T-499: Quantitative Analysis of Normal Tissue Effects in the Clinic (QUANTEC): Limits and Recommendations for Use in Treatment Planning Medical Physics. 36: 2638-2638. DOI: 10.1118/1.3181997  0.344
2009 Brown W, Deasy J, Khullar D, Apte A, Thomas A, Oldham M. SU-FF-T-482: Extension of An Informatics Architecture to Compare and Analyze 3D Dosimetric Data Medical Physics. 36: 2634-2634. DOI: 10.1118/1.3181980  0.609
2009 Davidson S, Cui J, Kry S, Vicic M, Deasy J, White R, Ibbott G, Followill D. SU-FF-T-444: Validation and Benchmark of a Source Model for a Varian 6 MV Photon Beam Using Monte Carlo Calculations Medical Physics. 36: 2624-2625. DOI: 10.1118/1.3181926  0.364
2009 Yang D, El Naqa I, Apte A, Wu Y, Goddu S, Mutic S, Deasy J, Low D. SU-FF-T-84: DIRART - a Software Suite for Deformable Image Registration and Adaptive Radiotherapy Research Medical Physics. 36: 2538-2539. DOI: 10.1118/1.3181557  0.6
2009 El Naqa I, Vaidya M, Apte A, Fergus S, Deasy J, Bradley J. SU-FF-J-20: A Multimodality Imaging Approach for Predicting Radiation Induced Lung Injury Medical Physics. 36: 2479-2479. DOI: 10.1118/1.3181312  0.666
2009 Deasy J, Bradley J, El Naqa I, Huang E, Bosch W, Matthews J, Graham M. PREDICTING THE RISK OF ACUTE ESOPHAGITIS BASED ON DOSE-VOLUME FACTORS: COMBINED MODELING OF RTOG 93-11 AND INSTITUTIONAL DATA Radiotherapy and Oncology. 92: S38. DOI: 10.1016/S0167-8140(12)72684-1  0.744
2009 Deasy J, Clark V, Apte A. BIOLOGICAL EVIDENCE TODAY: THE QUANTEC EFFORT Radiotherapy and Oncology. 92: S6. DOI: 10.1016/S0167-8140(12)72593-8  0.501
2009 Craft J, Spencer S, Al-Lozi R, Bradley J, Deasy J, El Naqa I. Integrating Serum Biomarkers and Dose–volume Metrics to Predict Radiation Pneumonitis International Journal of Radiation Oncology*Biology*Physics. 75: S108-S109. DOI: 10.1016/J.Ijrobp.2009.07.263  0.472
2009 Deasy J, Clark V, Chen Y, Apte A, Michalski J, Cui J. Development and Validation of an Automated IMRT Treatment Planning Algorithm International Journal of Radiation Oncology*Biology*Physics. 75: S660-S661. DOI: 10.1016/J.Ijrobp.2009.07.1507  0.554
2009 El Naqa I, Vaidya M, Apte A, Dehdashti F, Deasy JO, Bradley JD. Predicting response in lung cancer from FDG-PET uptake characteristics Ifmbe Proceedings. 25: 656-659. DOI: 10.1007/978-3-642-03474-9-184  0.605
2008 Das SK, Chen S, Deasy JO, Zhou S, Yin FF, Marks LB. Combining multiple models to generate consensus: application to radiation-induced pneumonitis prediction. Medical Physics. 35: 5098-109. PMID 19070244 DOI: 10.1118/1.2996012  0.371
2008 Kiehl EL, Stojadinovic S, Malinowski KT, Limbrick D, Jost SC, Garbow JR, Rubin JB, Deasy JO, Khullar D, Izaguirre EW, Parikh PJ, Low DA, Hope AJ. Feasibility of small animal cranial irradiation with the microRT system. Medical Physics. 35: 4735-43. PMID 18975718 DOI: 10.1118/1.2977762  0.47
2008 Yang D, Lu W, Low DA, Deasy JO, Hope AJ, El Naqa I. 4D-CT motion estimation using deformable image registration and 5D respiratory motion modeling. Medical Physics. 35: 4577-90. PMID 18975704 DOI: 10.1118/1.2977828  0.509
2008 Ju T, Simpson T, Deasy JO, Low DA. Geometric interpretation of the gamma dose distribution comparison technique: interpolation-free calculation. Medical Physics. 35: 879-87. PMID 18404924 DOI: 10.1118/1.2836952  0.312
2008 Deasy JO, El Naqa I. Image-based modeling of normal tissue complication probability for radiation therapy. Cancer Treatment and Research. 139: 215-56. PMID 18236719 DOI: 10.1007/978-0-387-36744-6_11  0.412
2008 Izaguirre E, Diao X, Stojadinovic S, Mutic S, Khullar D, Deasy J, Parikh P, Hope A, Grigsby P, Low D. TH-C-351-01: Design of the Washington University Small Animal Conformal Micro Irradiator Medical Physics. 35: 2974-2974. DOI: 10.1118/1.2962857  0.502
2008 ElNaqa I, Apte A, Yang D, Noel C, Bradle J, Deasy J. WE-E-AUD C-07: A Robust Approach for Estimating Tumor Volume Change During Radiotherapy of Lung Cancer Medical Physics. 35: 2956-2956. DOI: 10.1118/1.2962788  0.589
2008 Yang D, Apte A, Santanam L, El Naqa I, Deasy J. WE-E-AUD A-06: Image and Dose Processing for Image Guided Adaptive Radiation Therapy and Outcome Research Medical Physics. 35: 2952-2952. DOI: 10.1118/1.2962773  0.624
2008 Yang D, Lu W, Low D, Deasy J, El Naqa I. WE-C-351-04: 4DCT Motion Estimation and Modeling Medical Physics. 35: 2938-2938. DOI: 10.1118/1.2962711  0.31
2008 Clark V, Chen Y, Fergus S, Deasy J. TU-EE-A2-04: Increasing the Efficiency and Radiobiological Relevance of IMRT Treatment Planning: Replacing Dose-Volume Thresholds with Generalized Equivalent Uniform Dose Or Mean-Tail-Dose Metrics Medical Physics. 35: 2911-2911. DOI: 10.1118/1.2962614  0.383
2008 Deasy J. TU‐D‐AUD A‐01: Informatics Needs in Radiation Oncology Research: Challenges and Potential Solutions Medical Physics. 35: 2900-2900. DOI: 10.1118/1.2962570  0.306
2008 Low D, Izaguirre E, Deasy J, Mutic S, Hope A, Stojadinovic S, Diao X, Grigsby P. TU-C-AUD C-03: Teletherapy MicroRT Using a Commercial 192Ir Source Medical Physics. 35: 2890-2890. DOI: 10.1118/1.2962449  0.516
2008 Drzymala R, Karsch K, Alaly J, Khullar D, Wu Y, Deasy J. SU-GG-T-447: Import of Gamma Knife Model C Treatment Plans Into CERR Medical Physics. 35: 2827-2827. DOI: 10.1118/1.2962195  0.766
2008 Das S, Chen S, Zhou S, Yin F, Deasy J, Marks L. SU-GG-T-406: Improving Lung Radiation-Pneumonitis Prediction by Combining Different Models Medical Physics. 35: 2818-2818. DOI: 10.1118/1.2962155  0.322
2008 Huang E, Hope A, Lindsay P, Bradley J, Deasy J. SU-GG-T-404: The Impact of Breathing-Motion and Tumor Regression On Dose-Volume Metrics Used for Outcome Analyses Medical Physics. 35: 2817-2817. DOI: 10.1118/1.2962153  0.782
2008 Wu Y, Khullar D, Apte A, Alaly J, Matthews J, Bosch W, Ulin K, Deasy J. SU-GG-T-393: Improvements to the Computational Environment for Radiotherapy Research Open-Source Software System Medical Physics. 35: 2815-2815. DOI: 10.1118/1.2962143  0.787
2008 Bosch W, Matthews J, Deasy J, Michalski J, Straube W, Purdy J. SU-GG-T-385: QuASA2R - a Digital Data Quality Assurance Submission, Archive, Analysis, and Review System for Advanced Technology Clinical Trials in Radiation Therapy Medical Physics. 35: 2813-2814. DOI: 10.1118/1.2962137  0.312
2008 Davidson S, Cui J, Deasy J, Ibbott G, Followill D. SU-GG-T-345: Verification of a Monte Carlo-Based Source Model for a Varian 10 MV Photon Beam Medical Physics. 35: 2804-2804. DOI: 10.1118/1.2962097  0.335
2008 Cui J, Davidson S, Willcut V, El Naqa I, Followill D, Deasy J. SU-GG-T-143: Comparisons of a Monte Carlo IMRT Plan Recalculation Results with the Pinnacle Treatment Planning System Medical Physics. 35: 2759-2759. DOI: 10.1118/1.2961895  0.384
2008 Low D, Abraham C, Parikh P, Mutic S, Thorstad W, Liu L, Khullar D, Apte A, Deasy J, Ju T. SU-GG-J-192: Use of Optimized Oblique Anatomical Planes for Efficient and Accurate Organ and Tumor Segmentation Medical Physics. 35: 2723-2724. DOI: 10.1118/1.2961741  0.58
2008 Abraham C, Low D, Liu L, Parikh P, Mutic S, Thorstad W, Khullar D, Apte A, Deasy J, Ju T. SU-GG-I-105: A Process to Determine Optimal Oblique Contouring Planes Medical Physics. 35: 2666-2666. DOI: 10.1118/1.2961503  0.551
2008 ElNaqa I, Nofal A, Trovo M, Apte A, Yang D, Bradley J, Deasy J, Low D. SU-DD-A4-02: Assessment of PET Estimated Tumor Volume by Four-Dimensional Computed Tomography Measurements Medical Physics. 35: 2635-2635. DOI: 10.1118/1.2961369  0.654
2008 El Naqa I, Bradley JD, Deasy JO. Nonlinear kernel-based approaches for predicting normal tissue toxicities Proceedings - 7th International Conference On Machine Learning and Applications, Icmla 2008. 539-544. DOI: 10.1109/ICMLA.2008.126  0.442
2008 Yalavarthy PK, Low D, Noel C, Wei Z, Yang D, Apte A, Bradley J, Deasy J, El Naqa I. Current role of PET in oncology: Potentials and challenges in the management of non-small cell lung cancer Conference Record - Asilomar Conference On Signals, Systems and Computers. 1067-1071. DOI: 10.1109/ACSSC.2008.5074576  0.602
2008 Clark VH, Chen Y, Wilkens J, Alaly JR, Zakaryan K, Deasy JO. IMRT treatment planning for prostate cancer using prioritized prescription optimization and mean-tail-dose functions Linear Algebra and Its Applications. 428: 1345-1364. DOI: 10.1016/J.Laa.2007.07.026  0.768
2008 Deasy JO, Trovo M, Huang EX, Mu Y, Naqa IE, Bradley JD. Poster Discussion PresentationHigh-dose Heart Irradiation is a Statistically Significant Risk Factor for Radiation Pneumonitis within Logistic-multivariate Modeling International Journal of Radiation Oncology Biology Physics. 72. DOI: 10.1016/J.Ijrobp.2008.06.411  0.746
2008 Naqa E, Bradley J, Guild C, Apte A, Fergus S, Dehdashti F, Siegel B, Deasy J. Pattern Recognition Analysis of FDG-PET Uptake Characteristics for Assessing Response in NSCLC Post-radiotherapy Treatment International Journal of Radiation Oncology Biology Physics. 72. DOI: 10.1016/J.Ijrobp.2008.06.398  0.625
2008 Ulin K, Yorty J, Hanusik R, Urie M, Bosch WR, Apte A, Khullar D, Deasy JO, Fitzgerald TJ. Use of CERR at the Quality Assurance Review Center to Assess Protocol Compliance of Radiation Therapy Treatment Plans Submitted in Digital Format International Journal of Radiation Oncology Biology Physics. 72. DOI: 10.1016/J.Ijrobp.2008.06.379  0.574
2008 Huang E, Bradley J, Trovo M, Mu Y, El Naqa I, Apte A, Khullar D, Deasy J. High-dose Bronchial Irradiation is a Statistically Significant Risk Factor for Radiation Pneumonitis within Logistic-multivariate Modeling International Journal of Radiation Oncology*Biology*Physics. 72: S452-S453. DOI: 10.1016/J.Ijrobp.2008.06.1840  0.797
2008 Mu Y, Hope A, Lindsay P, El Naqa I, Apte A, Deasy J, Bradley J. Statistical Modeling of Tumor Control Probability for Non-small-cell Lung Cancer Radiotherapy International Journal of Radiation Oncology*Biology*Physics. 72: S448. DOI: 10.1016/J.Ijrobp.2008.06.1829  0.71
2008 Sheref YM, Naqa IE, Apte A, Fergus S, Deasy J, Thorstad WL, Donnelly E. Dose-outcome Relationships in Head and Neck Cancer Patients Post Intensity Modulated Radiation Therapy International Journal of Radiation Oncology Biology Physics. 72. DOI: 10.1016/J.Ijrobp.2008.06.1258  0.618
2007 El Naqa I, Yang D, Apte A, Khullar D, Mutic S, Zheng J, Bradley JD, Grigsby P, Deasy JO. Concurrent multimodality image segmentation by active contours for radiotherapy treatment planning. Medical Physics. 34: 4738-49. PMID 18196801 DOI: 10.1118/1.2799886  0.676
2007 Stojadinovic S, Low DA, Hope AJ, Vicic M, Deasy JO, Cui J, Khullar D, Parikh PJ, Malinowski KT, Izaguirre EW, Mutic S, Grigsby PW. MicroRT-small animal conformal irradiator. Medical Physics. 34: 4706-16. PMID 18196798 DOI: 10.1118/1.2799887  0.555
2007 Naqa IE, Cui J, Lindsay P, Olivera G, Deasy JO. The denoising of Monte Carlo dose distributions using convolution superposition calculations Physics in Medicine and Biology. 52. PMID 17762073 DOI: 10.1088/0031-9155/52/17/N02  0.317
2007 Bradley JD, Hope A, El Naqa I, Apte A, Lindsay PE, Bosch W, Matthews J, Sause W, Graham MV, Deasy JO. A nomogram to predict radiation pneumonitis, derived from a combined analysis of RTOG 9311 and institutional data. International Journal of Radiation Oncology, Biology, Physics. 69: 985-92. PMID 17689035 DOI: 10.1016/J.Ijrobp.2007.04.077  0.74
2007 Deasy JO, Alaly JR, Zakaryan K. Obstacles and advances in intensity-modulated radiation therapy treatment planning. Frontiers of Radiation Therapy and Oncology. 40: 42-58. PMID 17641501 DOI: 10.1159/000106027  0.761
2007 Wilkens JJ, Alaly JR, Zakarian K, Thorstad WL, Deasy JO. IMRT treatment planning based on prioritizing prescription goals. Physics in Medicine and Biology. 52: 1675-92. PMID 17327656 DOI: 10.1088/0031-9155/52/6/009  0.794
2007 Lindsay PE, El Naqa I, Hope AJ, Vicic M, Cui J, Bradley JD, Deasy JO. Retrospective monte carlo dose calculations with limited beam weight information. Medical Physics. 34: 334-46. PMID 17278519 DOI: 10.1118/1.2400826  0.645
2007 Simpson T, Deasy J, Apte A, Ju T. TH-D-M100E-09: Accurate Interpolation of 3D Structures and Doses Using Smoothed Surface Meshes Medical Physics. 34: 2644-2644. DOI: 10.1118/1.2761736  0.587
2007 Cui J, Davidson S, Lindsay P, Followill D, El Naqa I, Deasy J. WE-C-AUD-10: A Comparison of DPM and VMC++ Mont Carlo Codes Applied to Heterogeneous Media Medical Physics. 34: 2591-2591. DOI: 10.1118/1.2761518  0.316
2007 Davidson S, Cui J, Followill D, Ibbott G, Deasy J. TU-FF-A1-04: Benchmarking a Flexible Monte Carlo (MC) Tool Based On the Dose Planning Method (DPM) for Use in Evaluating IMRT Treatment Planning Systems Medical Physics. 34: 2574-2575. DOI: 10.1118/1.2761452  0.388
2007 Khullar D, Mullen D, Deasy J. TU-C-AUD-08: A Web-Based and Database-Centric Radiotherapy Treatment Plan Review and Reporting System Medical Physics. 34: 2551-2551. DOI: 10.1118/1.2761357  0.351
2007 Lee E, Cha K, Bortfeld T, Deasy J. MO-D-M100J-05: Robust Optimization to Accommodate Effects of Systematic Treatment Uncertainties Medical Physics. 34: 2523-2524. DOI: 10.1118/1.2761247  0.396
2007 Mullen D, Khullar D, Apte A, Deasy J. SU-FF-T-334: Outcomes-Based Quality Improvement: The Future Role of Outcomes in Monitoring the Radiotherapy Process Medical Physics. 34: 2478-2478. DOI: 10.1118/1.2760997  0.586
2007 Wattson D, Cui J, Wilkens J, Deasy J. SU-FF-T-264: Influence of Monte Carlo Beamlet Smoothness On Plan Metric Accuracy Medical Physics. 34: 2462-2462. DOI: 10.1118/1.2760925  0.36
2007 Khullar D, Molineu A, Followill D, Bosch W, Willcut V, Simpson T, Ju T, Deasy J. SU-FF-T-75: An Open-Source Software Tool to Support Film-Based IMRT Quality Assurance Medical Physics. 34: 2418-2418. DOI: 10.1118/1.2760726  0.314
2007 Apte A, El Naqa I, Deasy J. SU-FF-T-71: An Interactive Software Tool for Modifying Outcome Models and Predicting Patient Specific Outcomes in Treatment Planning Medical Physics. 34: 2417-2417. DOI: 10.1118/1.2760722  0.59
2007 Wu Y, Yang D, Khullar D, El Naqa I, Deasy J. SU-FF-J-126: An Open-Source Radiotherapy Image Registration Toolkit Integrated with CERR Medical Physics. 34: 2397-2397. DOI: 10.1118/1.2760631  0.324
2007 Liu L, Low D, Parikh P, Hubenschmidt J, Mutic S, Apte A, Zhao T, Deasy J, Ju T. SU-FF-J-118: A Method for Defining Segmentation Surfaces Using Nonparallel Contours Medical Physics. 34: 2395-2395. DOI: 10.1118/1.2760623  0.545
2007 Kiehl E, Garbow J, Hubenschmidt J, Khullar D, Apte A, Deasy J, Parikh P, Low D, Hope A. SU-FF-I-118: MicroRT Multi-Modality Treatment Planning Medical Physics. 34: 2365-2365. DOI: 10.1118/1.2760494  0.663
2007 El Naqa I, Grigsby P, Apte A, Kidd E, Chaudhari S, Yang D, Deasy J. SU-EE-A3-01: Beyond SUV: New Methods for Assessing Treatment Response in PET Images Medical Physics. 34: 2333-2333. DOI: 10.1118/1.2760358  0.607
2007 El Naqa I, Mutic S, Yang D, Khullar D, Deasy J. SU-DD-A4-03: A Validation Study of Concurrent Multimodality Segmentation Medical Physics. 34: 2326-2327. DOI: 10.1118/1.2760328  0.327
2007 Ohri N, Thorstad WL, Nussenbaum B, Adkins DR, Naga IME, Haughey BH, Deasy JO. Identifying dosimetric predictors of swallowing dysfunction in head and neck cancer patients treated with IMRT Radiotherapy and Oncology. 82. DOI: 10.1016/S0167-8140(07)80164-2  0.332
2007 Bosch WR, Straube WL, Matthews JW, Michalski JM, Deasy JO, Young B, O'Meara E, Curran WJ, Cox JD, Purdy JA. A Survey of the ITC Volumetric Treatment Planning Data Archive Supporting RTOG Advanced Technology Clinical Trials International Journal of Radiation Oncology Biology Physics. 69. DOI: 10.1016/J.Ijrobp.2007.07.353  0.398
2007 El Naqa I, Bradley J, Deasy J. Improved Radiation Pneumonitis Risk Modeling Using a Nonlinear Approach International Journal of Radiation Oncology*Biology*Physics. 69: S180-S181. DOI: 10.1016/J.Ijrobp.2007.07.327  0.473
2007 Lynch B, Cui J, Yang D, Lu W, Hubenschmidt J, Parikh P, Low D, Bradley J, Dempsey J, Deasy J. Four-Dimensional Dose Calculations to Determine the Effect of Breathing Motion on Outcomes-Related Parameters for Lung Cancer Patients International Journal of Radiation Oncology*Biology*Physics. 69: S132-S133. DOI: 10.1016/J.Ijrobp.2007.07.244  0.515
2007 Hope A, Georg M, Yang D, El Naqa I, Lindsay P, Lu W, Pless R, Bradley J, Low D, Deasy J. Incorporating Population-Based Breathing Motion Improves Radiation Pneumonitis Modeling Correlation International Journal of Radiation Oncology*Biology*Physics. 69: S506-S507. DOI: 10.1016/J.Ijrobp.2007.07.1724  0.587
2007 Russell W, Haughey B, Deasy J, El Naqa I, Thorstad W. Correlation of Dose and Fraction Size With Locoregional Control in Head and Neck Carcinoma Treated With IMRT International Journal of Radiation Oncology*Biology*Physics. 69: S413. DOI: 10.1016/J.Ijrobp.2007.07.1551  0.314
2006 Stojadinovic S, Low DA, Vicic M, Mutic S, Deasy JO, Hope AJ, Parikh PJ, Grigsby PW. Progress toward a microradiation therapy small animal conformal irradiator. Medical Physics. 33: 3834-45. PMID 17089848 DOI: 10.1118/1.2349693  0.524
2006 El Naqa I, Low DA, Bradley JD, Vicic M, Deasy JO. Deblurring of breathing motion artifacts in thoracic PET images by deconvolution methods. Medical Physics. 33: 3587-600. PMID 17089825 DOI: 10.1118/1.2336500  0.488
2006 El Naqa I, Suneja G, Lindsay PE, Hope AJ, Alaly JR, Vicic M, Bradley JD, Apte A, Deasy JO. Dose response explorer: an integrated open-source tool for exploring and modelling radiotherapy dose-volume outcome relationships. Physics in Medicine and Biology. 51: 5719-35. PMID 17068361 DOI: 10.1088/0031-9155/51/22/001  0.81
2006 Altman MB, Chmura SJ, Deasy JO, Roeske JC. Optimization of the temporal pattern of radiation: an IMRT based study. International Journal of Radiation Oncology, Biology, Physics. 66: 898-905. PMID 17011463 DOI: 10.1016/J.Ijrobp.2006.07.002  0.355
2006 Singh AK, Tierney RM, Low DA, Parikh PJ, Myerson RJ, Deasy JO, Wu CS, Pereira GC, Wahab SH, Mutic S, Grigsby PW, Hope AJ. A prospective study of differences in duodenum compared to remaining small bowel motion between radiation treatments: implications for radiation dose escalation in carcinoma of the pancreas. Radiation Oncology (London, England). 1: 33. PMID 16952315 DOI: 10.1186/1748-717X-1-33  0.557
2006 Hope AJ, Lindsay PE, El Naqa I, Alaly JR, Vicic M, Bradley JD, Deasy JO. Modeling radiation pneumonitis risk with clinical, dosimetric, and spatial parameters. International Journal of Radiation Oncology, Biology, Physics. 65: 112-24. PMID 16618575 DOI: 10.1016/J.Ijrobp.2005.11.046  0.789
2006 El Naqa I, Bradley J, Blanco AI, Lindsay PE, Vicic M, Hope A, Deasy JO. Multivariable modeling of radiotherapy outcomes, including dose-volume and clinical factors. International Journal of Radiation Oncology, Biology, Physics. 64: 1275-86. PMID 16504765 DOI: 10.1016/J.Ijrobp.2005.11.022  0.621
2006 Clark V, El Naqa I, Hope A, Suneja G, Bradley J, Deasy J. TH-E-230A-01: Can Dose-Volume Parameters Be Replaced with GEUD in the Treatment Planning Process? Medical Physics. 33: 2294-2294. DOI: 10.1118/1.2241963  0.728
2006 Stojadinovic S, Hope A, Vicic M, Mutic S, Deasy J, Cui J, Khullar D, Parikh P, Esthappan J, Grigsby P, Low D. TH-C-224C-02: MicroRT/microRTP: A Conformal Small Animal Planning and Irradiation System Medical Physics. 33: 2273-2273. DOI: 10.1118/1.2241875  0.56
2006 Hope A, Stojadinovic S, Deasy J, Hubenschmidt J, Grigsby P, Low D. TH-C-230A-08: A Prototype Rotational Immobilization System for a Proposed Static-Gantry MicroRT Device with Tomographic Capabilities Medical Physics. 33: 2272-2272. DOI: 10.1118/1.2241871  0.468
2006 Wilkens JJ, Alaly J, Deasy JO. TU-D-ValA-07: Prioritized Prescription-Goal Treatment Planning for IMRT: The Effect of Constraint Moderation Medical Physics. 33: 2202-2202. DOI: 10.1118/1.2241576  0.738
2006 El Naqa I, Cui J, Olivera G, Deasy J. TU-D-224C-07: Using Convolution Superposition to Guide Denoising of Monte-Carlo Dose Distributions Medical Physics. 33: 2200-2200. DOI: 10.1118/1.2241565  0.319
2006 Cui J, Zakaryan K, Alaly J, Vicic M, Wiesmeyer M, Deasy J. TU-D-224C-05: Validation of a Linear Accelerator Source Model and Commissioning Process for Routine Clinical Monte Carlo Calculations Medical Physics. 33: 2199-2199. DOI: 10.1118/1.2241563  0.748
2006 Lee E, Cha K, Bortfeld T, Deasy J. TU-C-224A-03: 4D-Image-Guided Treatment Planning Optimization for Management of Organ Motion in Radiotherapy Planning Medical Physics. 33: 2190-2191. DOI: 10.1118/1.2241527  0.367
2006 El Naqa I, Bae K, Zheng J, Khullar D, Bradley J, Grigsby P, Low D, Deasy J. TU-C-ValA-03: Concurrent Multimodality Image Segmentation Medical Physics. 33: 2186-2186. DOI: 10.1118/1.2241508  0.5
2006 Deasy J, Khullar D, Apte A, Hope A, Alaly J, Clark V, El Naqa I, Spezi E. SU-FF-T-409: The Computational Environment for Radiotherapy Research: New Tools for Multi-Modality Imaging, Treatment Plan Comparisons, and Plan Evaluations Medical Physics. 33: 2140-2140. DOI: 10.1118/1.2241328  0.806
2006 Zakaryan K, Cui J, Alaly J, El Naqa I, Simon J, Simon W, Low D, Deasy J. SU-FF-T-358: PlanCheck: A System for Routine Clinical Comparison of IMRT Treatment Plans with Monte Carlo Recalculations Medical Physics. 33: 2128-2129. DOI: 10.1118/1.2241279  0.762
2006 Wiesmeyer M, Cui J, Zakaryan K, Alaly J, Klein E, Mutic S, Low D, Deasy J. SU-FF-T-345: On the Suitability of Radiographic Film for Low Density Material Dosimetry and Photon Algorithm Verification Medical Physics. 33: 2126-2126. DOI: 10.1118/1.2241267  0.723
2006 Deasy J. SU-FF-J-112: Radiobiologically Motivated Margin Prescriptions Medical Physics. 33: 2046-2046. DOI: 10.1118/1.2240888  0.324
2006 Hope A, Meyerrose T, Stojadinovic S, Lin S, Nolta J, Deasy J, Low D. 141 Targeted sub-total irradiation of mouse models for normal tissue complication modeling using a prototype micrort device Radiotherapy and Oncology. 78: S46. DOI: 10.1016/S0167-8140(06)80620-1  0.45
2006 Deasy J, El Naqa I, Hope A, Lindsay P, Sause W, Graham M, Bosch W, Matthews J, Bradley J. 110 International Journal of Radiation Oncology*Biology*Physics. 66: S62-S63. DOI: 10.1016/J.Ijrobp.2006.07.141  0.451
2006 Naqa IE, Clark VH, Chen Y, Vicic M, Khullar D, Shimpi S, Hope A, Bradley J, Deasy JO. 2847: Treatment Outcome-based Objective Functions for IMRT Treatment Planning International Journal of Radiation Oncology Biology Physics. 66. DOI: 10.1016/J.Ijrobp.2006.07.1266  0.463
2006 Wiesmeyer M, Cui J, Zakaryan K, Alaly J, Klein E, Mutic S, Low D, Deasy J. 2806 International Journal of Radiation Oncology*Biology*Physics. 66: S661-S662. DOI: 10.1016/j.ijrobp.2006.07.1224  0.704
2006 Deasy JO, Powell SN, Zoberi I. The predicted effect of HDR dose heterogeneity on local/regional control for post-surgical patients: Location matters Brachytherapy. 5: 105. DOI: 10.1016/J.Brachy.2006.03.090  0.327
2006 Deasy J, Lee EK, Bortfeld T, Langer M, Zakarian K, Alaly J, Zhang Y, Liu H, Mohan R, Ahuja R, Pollack A, Purdy J, Rardin R. A collaboratory for radiation therapy treatment planning optimization research Annals of Operations Research. 148: 55-63. DOI: 10.1007/S10479-006-0079-7  0.795
2005 Blanco AI, Chao KS, El Naqa I, Franklin GE, Zakarian K, Vicic M, Deasy JO. Dose-volume modeling of salivary function in patients with head-and-neck cancer receiving radiotherapy. International Journal of Radiation Oncology, Biology, Physics. 62: 1055-69. PMID 15990009 DOI: 10.1016/J.Ijrobp.2004.12.076  0.81
2005 El Naqa I, Kawrakow I, Fippel M, Siebers JV, Lindsay PE, Wickerhauser MV, Vicic M, Zakarian K, Kauffmann N, Deasy JO. A comparison of Monte Carlo dose calculation denoising techniques Physics in Medicine and Biology. 50: 909-922. PMID 15798264 DOI: 10.1088/0031-9155/50/5/014  0.799
2005 Deasy J. TU-B-T-6E-01: Advanced Topics in IMRT Treatment Planning Medical Physics. 32: 2078-2078. DOI: 10.1118/1.1999701  0.379
2005 Lindsay P, El Naqa I, Hope A, Bradley J, Vicic M, Deasy J. TU-FF-A1-06: Monte Carlo Based Retrospective Dose Calculations for Outcomes Modeling Medical Physics. 32: 2114-2114. DOI: 10.1118/1.1998471  0.556
2005 Hope A, Alaly J, Liu J, Deasy J, Bradley J, Drzymala R. TU-C-T-617-06: Importance of Pre-Fraction Helical CT Isocenter Verification in Extracranial Stereotactic Radiosurgery Medical Physics. 32: 2087-2087. DOI: 10.1118/1.1998364  0.801
2005 El Naqa I, Low D, Bradley J, Vicic M, Deasy J. TU-C-J-6B-04: Deblurring of Breathing Motion Artifacts in Thoracic PET Images Medical Physics. 32: 2082-2083. DOI: 10.1118/1.1998348  0.489
2005 Deasy J. MO-E-T-6E-01: Outcome Prediction Models in Radiotherapy: Methods for Improvement and Future Uses Medical Physics. 32: 2072-2072. DOI: 10.1118/1.1998312  0.415
2005 Stojadinovic S, Low D, Vicic M, Parikh P, Mutic S, Deasy J, Hope A, Grigsby P. MO-D-T-6E-09: Progress Towards a MicroRT Small Animal Conformal Irradiator Medical Physics. 32: 2063-2063. DOI: 10.1118/1.1998279  0.541
2005 Suneja G, El Naqa I, Alaly J, Lindsay P, Hope A, Deasy J. MO-D-T-6E-02: Dose-Response Explorer: An Open-Source-Code Matlab-Based Tool for Modeling Treatment Outcome as a Function of Predictive Factors Medical Physics. 32: 2061-2062. DOI: 10.1118/1.1998272  0.814
2005 Deasy J, El Naqa I, Lindsay P. SU-FF-T-376: Multi-Variable Modeling of Radiotherapy Outcomes: Determining Optimal Model Size Medical Physics. 32: 2037-2037. DOI: 10.1118/1.1998105  0.319
2005 El Naqa I, Clark V, Bradley J, Deasy J. SU-FF-T-375: Machine Learning Methods for Radiobiological Outcomes Modeling Medical Physics. 32: 2037-2037. DOI: 10.1118/1.1998104  0.477
2005 Alaly J, Zakarian K, Lindsay P, El Naqa I, Hope A, Spezi E, Deasy J. SU-FF-T-360: Software Tools for 4-D and Adaptive Treatment Planning Data Visualization and Manipulation (CERR Version 3) Medical Physics. 32: 2033-2033. DOI: 10.1118/1.1998089  0.801
2005 Zakarian K, Alaly J, Novak P, Deasy J, Moros E. SU-FF-T-320: Simple Acoustic Beam Model for Thermoradiotherapy Implemented in An Open Source Treatment Planning Research System Medical Physics. 32: 2024-2024. DOI: 10.1118/1.1998049  0.8
2005 Zakarian K, Alaly J, Low D, Wood R, Zhang L, Deasy J. SU-FF-T-127: A Monte Carlo-Based IMRT Plan Re-Calculator Medical Physics. 32: 1979-1979. DOI: 10.1118/1.1997798  0.808
2005 Lee E, Bortfeld T, Deasy J. SU-FF-T-123: Robust Optimization Including Effects of Systematic Treatment Errors Medical Physics. 32: 1978-1978. DOI: 10.1118/1.1997794  0.363
2005 Ahunbay E, Schmainda K, Lund R, Prost R, Ulmer J, Alaly J, Deasy J, Schultz C, Li X. SU-FF-J-105: Tools for Voxel-By-Voxel Correlation of Radiotherapy Dose and MR Signals From Multiple Physiological/functional MRI Modalities Medical Physics. 32: 1944-1944. DOI: 10.1118/1.1997651  0.768
2005 Lee E, Cha K, Bortfeld T, Deasy J. SU-FF-J-26: Multistage Treatment Planning Optimization for Managing Organ Motion in Radiotherapy Planning Medical Physics. 32: 1925-1925. DOI: 10.1118/1.1997572  0.375
2005 Clark V, Alaly J, Zakarian K, Deasy J. SU-CC-J-6C-08: Automated Beam Direction Selection for IMRT Based On Geometrical Concepts of Viewability and Orthogonality Medical Physics. 32: 1890-1890. DOI: 10.1118/1.1997414  0.774
2005 Deasy J, El Naqa I, Lindsay P, Alaly J, Bradley J, Hope A. 246 Outcomes modeling based on 3-D images and dose-volume data Radiotherapy and Oncology. 76: S118. DOI: 10.1016/S0167-8140(05)81223-X  0.799
2005 Lindsay P, El Naqa I, Hope A, Bradley J, Vicic M, Deasy J. Modeling of Pneumonitis Risk using Monte Carlo Corrected Dosimetry International Journal of Radiation Oncology*Biology*Physics. 63: S557. DOI: 10.1016/J.Ijrobp.2005.07.938  0.445
2005 Hope A, Lindsay P, El Naqa I, Bradley J, Vivic M, Deasy J. Clinical, Dosimetric, and Location-Related Factors to Predict Local Control in Non-Small Cell Lung Cancer International Journal of Radiation Oncology*Biology*Physics. 63: S231. DOI: 10.1016/J.Ijrobp.2005.07.394  0.595
2005 Bradley J, Deasy J, El Naqa I, Lindsay P, Hope A, Bosch W, Matthews J, Sause W, Graham M. Predictors of Lung Toxicity from the RTOG 9311 Radiation Dose Escalation Trial: GTV Position is Important International Journal of Radiation Oncology*Biology*Physics. 63: S40-S41. DOI: 10.1016/J.Ijrobp.2005.07.073  0.522
2004 Wahab SH, Malyapa RS, Mutic S, Grigsby PW, Deasy JO, Miller TR, Zoberi I, Low DA. A treatment planning study comparing HDR and AGIMRT for cervical cancer. Medical Physics. 31: 734-43. PMID 15124990 DOI: 10.1118/1.1645678  0.418
2004 Chao KS, Ozyigit G, Blanco AI, Thorstad WL, Deasy JO, Haughey BH, Spector GJ, Sessions DG. Intensity-modulated radiation therapy for oropharyngeal carcinoma: impact of tumor volume. International Journal of Radiation Oncology, Biology, Physics. 59: 43-50. PMID 15093897 DOI: 10.1016/J.Ijrobp.2003.08.004  0.352
2004 Bradley J, Deasy JO, Bentzen S, El-Naqa I. Dosimetric correlates for acute esophagitis in patients treated with radiotherapy for lung carcinoma. International Journal of Radiation Oncology, Biology, Physics. 58: 1106-13. PMID 15001251 DOI: 10.1016/J.Ijrobp.2003.09.080  0.526
2004 Zakarian C, Deasy JO. Beamlet dose distribution compression and reconstruction using wavelets for intensity modulated treatment planning. Medical Physics. 31: 368-75. PMID 15000623 DOI: 10.1118/1.1636560  0.382
2004 El Naqa IM, Low DA, Christensen G, Parikh PJ, Song JH, Nystrom MM, Lu W, Deasy JO, Hubenschmidt JP, Wahab SH, Mutic S, Singh AK, Bradley JD. Automated 4-D lung computed tomography reconstruction during free breathing for conformal radiation therapy Proceedings of Spie - the International Society For Optical Engineering. 5369: 100-106. DOI: 10.1117/12.536141  0.447
2004 Zakarian C, Lindsay P, El Naqa I, Deasy J. Fast IMRT treatment planning based on Monte Carlo pre-computed beamlets International Journal of Radiation Oncology*Biology*Physics. 60: S629. DOI: 10.1016/J.Ijrobp.2004.07.645  0.309
2004 Hope A, El Naqa I, Bradley J, Vivic M, Lindsay P, Bosch W, Purdy J, Deasy J. Radiation pneumonitis/fibrosis risk based on dosimetric, clinical, and location-related factors International Journal of Radiation Oncology*Biology*Physics. 60: S204. DOI: 10.1016/J.Ijrobp.2004.06.150  0.591
2004 Blanco A, Deasy JO, Naqa IE, Franklin GE. Dose-volume modeling of salivary function in patients with head and neck cancer receiving radiation therapy International Journal of Radiation Oncology Biology Physics. 60. DOI: 10.1016/J.Ijrobp.2004.06.124  0.406
2004 Low DA, Vicic M, Mutic S, Grigsby PW, Deasy JO, Hope A. microRT: A conformal small animal irradiator 2004 2nd Ieee International Symposium On Biomedical Imaging: Macro to Nano. 2: 1365-1368.  0.475
2003 Deasy JO, Blanco AI, Clark VH. CERR: a computational environment for radiotherapy research. Medical Physics. 30: 979-85. PMID 12773007 DOI: 10.1118/1.1568978  0.366
2003 Llacer J, Deasy JO, Portfeld TR, Solberg TD, Promberger C. Absence of multiple local minima effects in intensity modulated optimization with dose-volume constraints. Physics in Medicine and Biology. 48: 183-210. PMID 12587904 DOI: 10.1088/0031-9155/48/2/304  0.333
2003 Wahab SH, Malyapa RS, Mutic S, Grigsby PW, Deasy JO, Miller TR, Low DA. A Treatment Planning Study Comparing Brachytherapy And Intensity Modulated Radiation Therapy For Cervical Cancer. Journal of Investigative Medicine. 51: 339-340. DOI: 10.1136/Jim-51-06-28  0.364
2003 Deasy J, Bradley J, El Naqa I, Bosch W, Vicic M, Purdy J. Risk of radiation pneumonitis classified via dosimetric parameters International Journal of Radiation Oncology*Biology*Physics. 57: S412. DOI: 10.1016/S0360-3016(03)01352-X  0.473
2002 Choi B, Deasy JO. The generalized equivalent uniform dose function as a basis for intensity-modulated treatment planning. Physics in Medicine and Biology. 47: 3579-89. PMID 12433121 DOI: 10.1088/0031-9155/47/20/302  0.324
2002 Deasy JO, Wickerhauser MV, Picard M. Accelerating Monte Carlo simulations of radiation therapy dose distributions using wavelet threshold de-noising. Medical Physics. 29: 2366-73. PMID 12408311 DOI: 10.1118/1.1508112  0.329
2002 Markman J, Low DA, Beavis AW, Deasy JO. Beyond bixels: generalizing the optimization parameters for intensity modulated radiation therapy. Medical Physics. 29: 2298-304. PMID 12408304 DOI: 10.1118/1.1508799  0.34
2002 Deasy JO, Niemierko A, Herbert D, Yan D, Jackson A, Ten Haken RK, Langer M, Sapareto S. Methodological issues in radiation dose-volume outcome analyses: summary of a joint AAPM/NIH workshop. Medical Physics. 29: 2109-27. PMID 12349932 DOI: 10.1118/1.1501473  0.42
2002 Low D, Bradley J, Dempsey J, Politte D, Islam K, Mutic S, Deasy J, Zakarian C, Christensen G. A method for the four-dimensional measurement of normal and cancerous lung during free breathing International Journal of Radiation Oncology*Biology*Physics. 54: 199-200. DOI: 10.1016/S0360-3016(02)03401-6  0.473
2002 Blanco AI, Chao CK, Deasy JO, Low DA. Recovery kinetics of salivary function in patients with head and neck cancers receiving radiation therapy International Journal of Radiation Oncology Biology Physics. 54: 166. DOI: 10.1016/S0360-3016(02)03345-X  0.341
2002 Bradley J, Deasy J, Bentzen S, Bosch W, Purdy J. Irradiated esophageal surface area predicts for esophagitis in patients treated for non-small cell carcinoma of the lung International Journal of Radiation Oncology*Biology*Physics. 54: 105-106. DOI: 10.1016/S0360-3016(02)03238-8  0.467
2002 Ojemann J, Low D, Islam K, Maccotta L, Buckner R, Deasy J, Simpson J. Can functional imaging support brain dose escalation using IMRT International Journal of Radiation Oncology*Biology*Physics. 54: 31. DOI: 10.1016/S0360-3016(02)03109-7  0.317
2001 Deasy JO, Chao KSC, Markman J. Uncertainties in model-based outcome predictions for treatment planning International Journal of Radiation Oncology Biology Physics. 51: 1389-1399. PMID 11728700 DOI: 10.1016/S0360-3016(01)02659-1  0.351
2001 Chao KSC, Deasy JO, Markman J, Haynie J, Perez CA, Purdy JA, Low DA. A prospective study of salivary function sparing in patients with head-and-neck cancers receiving intensity-modulated or three-dimensional radiation therapy: Initial results International Journal of Radiation Oncology Biology Physics. 49: 907-916. PMID 11240231 DOI: 10.1016/S0360-3016(00)01441-3  0.42
2001 Deasy J, Fowler J, Roti Roti J, Low D. Dose-rate effects in intensity modulated radiation therapy International Journal of Radiation Oncology*Biology*Physics. 51: 400-401. DOI: 10.1016/S0360-3016(01)02561-5  0.339
2001 Sohn J, Low D, Deasy J. Motion-induced dose distribution artifacts in lung cancer IMRT International Journal of Radiation Oncology*Biology*Physics. 51: 347-348. DOI: 10.1016/S0360-3016(01)02464-6  0.354
2001 Low D, Bradley J, Deasy J, Laforest R, Parikh P, Sohn J, Hibbard L, Dehdashti F, Mutic S, Bosch W. Lung trajectory mapping International Journal of Radiation Oncology*Biology*Physics. 51: 208-209. DOI: 10.1016/S0360-3016(01)02206-4  0.421
2001 Dempsey J, Deasy J, Lomax A, Wiesmeyer M, Bosch W, Low D. Treatment plan review tools incorporating spatial dose-volume information International Journal of Radiation Oncology*Biology*Physics. 51: 125. DOI: 10.1016/S0360-3016(01)02051-X  0.334
2000 Deasy JO. Denoising of electron beam Monte Carlo dose distributions using digital filtering techniques Physics in Medicine and Biology. 45: 1765-1779. PMID 10943918 DOI: 10.1088/0031-9155/45/7/305  0.319
2000 Chao C, Deasy J, Markman J, Haynie J, Perez C, Purdy J, Low D. Functional outcome of parotid gland sparing in patients with head and neck (H&N) cancers receiving intensity-modulated (IMRT) or 3-D radiation therapy International Journal of Radiation Oncology*Biology*Physics. 48: 174. DOI: 10.1016/S0360-3016(00)80141-8  0.335
2000 Bradley J, Deasy J, Purdy J, Wasserman T, Graham M, Ieumwananonthachai N, Lockett M. Gross tumor volume is an independent predictor of survival in non-small cell lung carcinoma patients treated with conformal radiotherapy International Journal of Radiation Oncology*Biology*Physics. 48: 129-130. DOI: 10.1016/S0360-3016(00)80055-3  0.484
1998 Deasy JO. A proton dose calculation algorithm for conformal therapy simulations based on Moliere's theory of lateral deflections Medical Physics. 25: 476-483. PMID 9571613 DOI: 10.1118/1.598222  0.307
1997 Deasy JO. Multiple local minima in radiotherapy optimization problems with dose- volume constraints Medical Physics. 24: 1157-1161. PMID 9243478 DOI: 10.1118/1.598017  0.352
1997 Yang JN, Mackie TR, Reckwerdt P, Deasy JO, Thomadsen BR. An investigation of tomotherapy beam delivery. Medical Physics. 24: 425-36. PMID 9089594 DOI: 10.1118/1.597909  0.507
1996 Xu Z, Almond PR, Deasy JO. The dose distribution produced by a 32P source for endovascular irradiation International Journal of Radiation Oncology Biology Physics. 36: 933-939. PMID 8960523 DOI: 10.1016/S0360-3016(96)00300-8  0.597
1996 Deasy JO, Almond PR, McEllistrem MT. Measured electron energy and angular distributions from clinical accelerators Medical Physics. 23: 675-684. PMID 8724740 DOI: 10.1118/1.597817  0.679
1995 Deasy J, Mackie T, DeLuca P. Comformal proton tomotherapy using distaledge tracking Radiotherapy and Oncology. 37: S43. DOI: 10.1016/0167-8140(96)80599-8  0.447
1995 Deasy J, Almond P, McEllistrem M. Realistic electron beam spectra: Measurements and dosimetric effects Radiotherapy and Oncology. 37: S32. DOI: 10.1016/0167-8140(96)80552-4  0.672
1994 Deasy JO, Soares CG. Extrapolation chamber measurements of 90Sr+90Y beta-particle ophthalmic applicator dose rates Medical Physics. 21: 91-99. PMID 8164595 DOI: 10.1118/1.597239  0.314
1994 Deasy JO, Almond PR, McEllistrem MT, Ross CK. A simple magnetic spectrometer for radiotherapy electron beams. Medical Physics. 21: 1703-14. PMID 7891630 DOI: 10.1118/1.597271  0.678
1994 Deasy JO, Almond PR, McEllistrem MT. The spectral dependence of electron central-axis depth-dose curves Medical Physics. 21: 1369-1376. PMID 7838046 DOI: 10.1118/1.597192  0.71
1994 Deasy J, Steeves RA. Prediction of Response in Radiation Therapy: Radiosensitivity andRepopulation. Fourth International Conference on Dose, Time, andFractionation in Radiation Oncology. edited by Bhudatt R. Paliwal, Donald E. Herbert, John F. Fowler, and Timothy J. Kinsella Medical Physics. 21: 1819-1819. DOI: 10.1118/1.597219  0.338
1993 Mackie TR, Holmes T, Swerdloff S, Reckwerdt P, Deasy JO, Yang J, Paliwal B, Kinsella T. Tomotherapy: a new concept for the delivery of dynamic conformal radiotherapy. Medical Physics. 20: 1709-19. PMID 8309444 DOI: 10.1118/1.596958  0.686
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