| Year |
Citation |
Score |
| 2022 |
Kim JM, Kim YS, Kim YR, Choi MJ, DasSarma P, DasSarma S. Correction to: Bioengineering of Halobacterium sp. NRC‑1 gas vesicle nanoparticles with GvpC fusion protein produced in E. coli. Applied Microbiology and Biotechnology. 106: 3319. PMID 35435460 DOI: 10.1007/s00253-022-11924-z |
0.647 |
|
| 2022 |
Kim JM, Kim YS, Kim YR, Choi MJ, DasSarma P, DasSarma S. Bioengineering of Halobacterium sp. NRC-1 gas vesicle nanoparticles with GvpC fusion protein produced in E. coli. Applied Microbiology and Biotechnology. 106: 2043-2052. PMID 35230496 DOI: 10.1007/s00253-022-11841-1 |
0.668 |
|
| 2022 |
DasSarma P, Anton BP, Griffith JM, Kunka KS, Roberts RJ, DasSarma S. Genome Sequence of the Early 20th-Century Extreme Halophile sp. Strain NRC-34001. Microbiology Resource Announcements. 11: e0118121. PMID 35023769 DOI: 10.1128/mra.01181-21 |
0.369 |
|
| 2021 |
DasSarma P, Anton BP, von Ehrenheim HAL, Martinez FL, Guzmán D, Roberts RJ, DasSarma S. Genome Sequence of sp. Strain BOL4-2, Isolated and Cultured from Salar de Uyuni, Bolivia. Microbiology Resource Announcements. 10: e0104521. PMID 34854697 DOI: 10.1128/MRA.01045-21 |
0.3 |
|
| 2021 |
Fomenkov A, DasSarma P, Kennedy SP, Roberts RJ, DasSarma S. Complete Genome and Methylome Analysis of the Box-Shaped Halophilic Archaeon Haloarcula sinaiiensis ATCC 33800. Microbiology Resource Announcements. 10: e0061921. PMID 34435862 DOI: 10.1128/MRA.00619-21 |
0.676 |
|
| 2021 |
DasSarma P, Anton BP, von Ehrenheim HAL, Roberts RJ, DasSarma S. Complete Genome Sequence of an Extremely Halophilic Archaeon from Great Salt Lake, sp. GSL-19. Microbiology Resource Announcements. 10: e0052021. PMID 34264097 DOI: 10.1128/MRA.00520-21 |
0.391 |
|
| 2021 |
DasSarma P, Anton BP, DasSarma SL, von Ehrenheim HAL, Martinez FL, Guzmán D, Roberts RJ, DasSarma S. Genome Sequence and Methylation Pattern of Haloterrigena salifodinae BOL5-1, an Extremely Halophilic Archaeon from a Bolivian Salt Mine. Microbiology Resource Announcements. 10. PMID 33958400 DOI: 10.1128/MRA.00275-21 |
0.339 |
|
| 2020 |
Anton BP, DasSarma P, Martinez FL, DasSarma SL, Al Madadha M, Roberts RJ, DasSarma S. Genome Sequence of sp. Strain JOR-1, an Extremely Halophilic Archaeon from the Dead Sea. Microbiology Resource Announcements. 9. PMID 32001568 DOI: 10.1128/MRA.01505-19 |
0.393 |
|
| 2019 |
DasSarma P, Anton BP, DasSarma SL, Martinez FL, Guzman D, Roberts RJ, DasSarma S. Genome Sequences and Methylation Patterns of Natrinema versiforme BOL5-4 and Natrinema pallidum BOL6-1, Two Extremely Halophilic Archaea from a Bolivian Salt Mine. Microbiology Resource Announcements. 8. PMID 31416876 DOI: 10.1128/MRA.00810-19 |
0.334 |
|
| 2019 |
DasSarma S, Fomenkov A, DasSarma SL, Vincze T, DasSarma P, Roberts RJ. Methylomes of Two Extremely Halophilic Species, Haloarcula marismortui and Haloferax mediterranei. Microbiology Resource Announcements. 8. PMID 31270201 DOI: 10.1128/MRA.00577-19 |
0.35 |
|
| 2019 |
DasSarma P, Anton BP, DasSarma S, Laye VJ, Guzman D, Roberts RJ, DasSarma S. Genome Sequence and Methylation Patterns of sp. Strain BOL3-1, the First Haloarchaeon Isolated and Cultured from Salar de Uyuni, Bolivia. Microbiology Resource Announcements. 8. PMID 31072883 DOI: 10.1128/MRA.00386-19 |
0.348 |
|
| 2018 |
Müller WJ, Smit MS, van Heerden E, Capes MD, DasSarma S. Complex Effects of Cytochrome P450 Monooxygenase on Purple Membrane and Bacterioruberin Production in an Extremely Halophilic Archaeon: Genetic, Phenotypic, and Transcriptomic Analyses. Frontiers in Microbiology. 9: 2563. PMID 30416496 DOI: 10.3389/fmicb.2018.02563 |
0.795 |
|
| 2017 |
Laye VJ, Karan R, Kim JM, Pecher WT, DasSarma P, DasSarma S. Key amino acid residues conferring enhanced enzyme activity at cold temperatures in an Antarctic polyextremophilic β-galactosidase. Proceedings of the National Academy of Sciences of the United States of America. PMID 29109294 DOI: 10.1073/Pnas.1711542114 |
0.668 |
|
| 2016 |
Balakrishnan A, DasSarma P, Bhattacharjee O, Kim JM, DasSarma S, Chakravortty D. Halobacterial nano vesicles displaying murine bactericidal permeability-increasing protein rescue mice from lethal endotoxic shock. Scientific Reports. 6: 33679. PMID 27646594 DOI: 10.1038/srep33679 |
0.635 |
|
| 2016 |
Anderson IJ, DasSarma P, Lucas S, Copeland A, Lapidus A, Del Rio TG, Tice H, Dalin E, Bruce DC, Goodwin L, Pitluck S, Sims D, Brettin TS, Detter JC, Han CS, ... ... DasSarma S, et al. Complete genome sequence of the Antarctic Halorubrum lacusprofundi type strain ACAM 34. Standards in Genomic Sciences. 11: 70. PMID 27617060 DOI: 10.1186/s40793-016-0194-2 |
0.344 |
|
| 2016 |
DasSarma P, Karan R, Kim JM, Pecher W, DasSarma S. Bioengineering novel floating nanoparticles for protein and drug delivery. Materials Today : Proceedings. 3: 206-210. PMID 27158595 DOI: 10.1016/J.Matpr.2016.01.058 |
0.684 |
|
| 2015 |
DasSarma P, Negi VD, Balakrishnan A, Kim JM, Karan R, Chakravortty D, DasSarma S. Haloarchaeal gas vesicle nanoparticles displaying Salmonella antigens as a novel approach to vaccine development. Procedia in Vaccinology. 9: 16-23. PMID 26900411 DOI: 10.1016/J.Provac.2015.05.003 |
0.641 |
|
| 2014 |
Karan R, DasSarma P, Balcer-Kubiczek E, Weng RR, Liao CC, Goodlett DR, Ng WV, Dassarma S. Bioengineering radioresistance by overproduction of RPA, a mammalian-type single-stranded DNA-binding protein, in a halophilic archaeon. Applied Microbiology and Biotechnology. 98: 1737-47. PMID 24292079 DOI: 10.1007/S00253-013-5368-X |
0.685 |
|
| 2013 |
Dassarma S, Capes MD, Karan R, Dassarma P. Amino acid substitutions in cold-adapted proteins from Halorubrum lacusprofundi, an extremely halophilic microbe from antarctica. Plos One. 8: e58587. PMID 23536799 DOI: 10.1371/Journal.Pone.0058587 |
0.772 |
|
| 2013 |
Karan R, Capes MD, DasSarma P, DasSarma S. Cloning, overexpression, purification, and characterization of a polyextremophilic β-galactosidase from the Antarctic haloarchaeon Halorubrum lacusprofundi. Bmc Biotechnology. 13: 3. PMID 23320757 DOI: 10.1186/1472-6750-13-3 |
0.805 |
|
| 2012 |
DasSarma P, Zamora RC, Müller JA, DasSarma S. Genome-wide responses of the model archaeon Halobacterium sp. strain NRC-1 to oxygen limitation. Journal of Bacteriology. 194: 5530-7. PMID 22865851 DOI: 10.1128/JB.01153-12 |
0.352 |
|
| 2012 |
Karan R, Capes MD, Dassarma S. Function and biotechnology of extremophilic enzymes in low water activity. Aquatic Biosystems. 8: 4. PMID 22480329 DOI: 10.1186/2046-9063-8-4 |
0.748 |
|
| 2012 |
Capes MD, DasSarma P, DasSarma S. The core and unique proteins of haloarchaea. Bmc Genomics. 13: 39. PMID 22272718 DOI: 10.1186/1471-2164-13-39 |
0.811 |
|
| 2011 |
Capes MD, Coker JA, Gessler R, Grinblat-Huse V, DasSarma SL, Jacob CG, Kim JM, DasSarma P, DasSarma S. The information transfer system of halophilic archaea. Plasmid. 65: 77-101. PMID 21094181 DOI: 10.1016/J.Plasmid.2010.11.005 |
0.817 |
|
| 2010 |
Dassarma SL, Capes MD, Dassarma P, Dassarma S. HaloWeb: the haloarchaeal genomes database. Saline Systems. 6: 12. PMID 21192823 DOI: 10.1186/1746-1448-6-12 |
0.805 |
|
| 2009 |
Coker JA, DasSarma P, Capes M, Wallace T, McGarrity K, Gessler R, Liu J, Xiang H, Tatusov R, Berquist BR, DasSarma S. Multiple replication origins of Halobacterium sp. strain NRC-1: properties of the conserved orc7-dependent oriC1. Journal of Bacteriology. 191: 5253-61. PMID 19502403 DOI: 10.1128/Jb.00210-09 |
0.812 |
|
| 2008 |
Ng WV, Berquist BR, Coker JA, Capes M, Wu TH, DasSarma P, DasSarma S. Genome sequences of Halobacterium species. Genomics. 91: 548-52; author reply. PMID 18538726 DOI: 10.1016/J.Ygeno.2008.04.005 |
0.774 |
|
| 2007 |
Coker JA, DasSarma P, Kumar J, Müller JA, DasSarma S. Transcriptional profiling of the model Archaeon Halobacterium sp. NRC-1: responses to changes in salinity and temperature. Saline Systems. 3: 6. PMID 17651475 DOI: 10.1186/1746-1448-3-6 |
0.319 |
|
| 2007 |
Berquist BR, DasSarma P, DasSarma S. Essential and non-essential DNA replication genes in the model halophilic Archaeon, Halobacterium sp. NRC-1. Bmc Genetics. 8: 31. PMID 17559652 DOI: 10.1186/1471-2156-8-31 |
0.753 |
|
| 2006 |
Crowley DJ, Boubriak I, Berquist BR, Clark M, Richard E, Sullivan L, DasSarma S, McCready S. The uvrA, uvrB and uvrC genes are required for repair of ultraviolet light induced DNA photoproducts in Halobacterium sp. NRC-1. Saline Systems. 2: 11. PMID 16970815 DOI: 10.1186/1746-1448-2-11 |
0.739 |
|
| 2006 |
DasSarma S, Berquist BR, Coker JA, DasSarma P, Müller JA. Post-genomics of the model haloarchaeon Halobacterium sp. NRC-1. Saline Systems. 2: 3. PMID 16542428 DOI: 10.1186/1746-1448-2-3 |
0.773 |
|
| 2006 |
Berquist BR, Müller JA, DasSarma S. 27 Genetic Systems for Halophilic Archaea Methods in Microbiology. 35: 649-680. DOI: 10.1016/S0580-9517(08)70030-8 |
0.668 |
|
| 2005 |
McCready S, Müller JA, Boubriak I, Berquist BR, Ng WL, DasSarma S. UV irradiation induces homologous recombination genes in the model archaeon, Halobacterium sp. NRC-1. Saline Systems. 1: 3. PMID 16176594 DOI: 10.1186/1746-1448-1-3 |
0.727 |
|
| 2005 |
Müller JA, DasSarma S. Genomic analysis of anaerobic respiration in the archaeon Halobacterium sp. strain NRC-1: dimethyl sulfoxide and trimethylamine N-oxide as terminal electron acceptors. Journal of Bacteriology. 187: 1659-67. PMID 15716436 DOI: 10.1128/JB.187.5.1659-1667.2005 |
0.349 |
|
| 2004 |
Wang G, Kennedy SP, Fasiludeen S, Rensing C, DasSarma S. Arsenic resistance in Halobacterium sp. strain NRC-1 examined by using an improved gene knockout system. Journal of Bacteriology. 186: 3187-94. PMID 15126481 DOI: 10.1128/Jb.186.10.3187-3194.2004 |
0.654 |
|
| 2004 |
Goo YA, Roach J, Glusman G, Baliga NS, Deutsch K, Pan M, Kennedy S, DasSarma S, Ng WV, Hood L. Low-pass sequencing for microbial comparative genomics. Bmc Genomics. 5: 3. PMID 14718067 DOI: 10.1186/1471-2164-5-3 |
0.811 |
|
| 2003 |
Berquist BR, DasSarma S. An archaeal chromosomal autonomously replicating sequence element from an extreme halophile, Halobacterium sp. strain NRC-1. Journal of Bacteriology. 185: 5959-66. PMID 14526006 DOI: 10.1128/JB.185.20.5959-5966.2003 |
0.785 |
|
| 2001 |
Dassarma S, Kennedy SP, Berquist B, Victor Ng W, Baliga NS, Spudich JL, Krebs MP, Eisen JA, Johnson CH, Hood L. Genomic perspective on the photobiology of Halobacterium species NRC-1, a phototrophic, phototactic, and UV-tolerant haloarchaeon. Photosynthesis Research. 70: 3-17. PMID 16228359 DOI: 10.1023/A:1013879706863 |
0.801 |
|
| 2001 |
Kennedy SP, Ng WV, Salzberg SL, Hood L, DasSarma S. Understanding the adaptation of Halobacterium species NRC-1 to its extreme environment through computational analysis of its genome sequence. Genome Research. 11: 1641-50. PMID 11591641 DOI: 10.1101/Gr.190201 |
0.812 |
|
| 2001 |
Baliga NS, Kennedy SP, Ng WV, Hood L, DasSarma S. Genomic and genetic dissection of an archaeal regulon. Proceedings of the National Academy of Sciences of the United States of America. 98: 2521-5. PMID 11226271 DOI: 10.1073/Pnas.051632498 |
0.82 |
|
| 2001 |
Peck RF, Echavarri-Erasun C, Johnson EA, Ng WV, Kennedy SP, Hood L, DasSarma S, Krebs MP. brp and blh are required for synthesis of the retinal cofactor of bacteriorhodopsin in Halobacterium salinarum. The Journal of Biological Chemistry. 276: 5739-44. PMID 11092896 DOI: 10.1074/Jbc.M009492200 |
0.77 |
|
| 2000 |
Ng WV, Kennedy SP, Mahairas GG, Berquist B, Pan M, Shukla HD, Lasky SR, Baliga NS, Thorsson V, Sbrogna J, Swartzell S, Weir D, Hall J, Dahl TA, Welti R, ... ... DasSarma S, et al. Genome sequence of Halobacterium species NRC-1. Proceedings of the National Academy of Sciences of the United States of America. 97: 12176-81. PMID 11016950 DOI: 10.1073/Pnas.190337797 |
0.808 |
|
| 2000 |
Baliga NS, Goo YA, Ng WV, Hood L, Daniels CJ, DasSarma S. Is gene expression in Halobacterium NRC-1 regulated by multiple TBP and TFB transcription factors? Molecular Microbiology. 36: 1184-5. PMID 10844702 DOI: 10.1046/J.1365-2958.2000.01916.X |
0.746 |
|
| 2000 |
Baliga NS, DasSarma S. Saturation mutagenesis of the haloarchaeal bop gene promoter: identification of DNA supercoiling sensitivity sites and absence of TFB recognition element and UAS enhancer activity. Molecular Microbiology. 36: 1175-83. PMID 10844701 DOI: 10.1046/J.1365-2958.2000.01915.X |
0.59 |
|
| 2000 |
Peck RF, DasSarma S, Krebs MP. Homologous gene knockout in the archaeon Halobacterium salinarum with ura3 as a counterselectable marker. Molecular Microbiology. 35: 667-76. PMID 10672188 DOI: 10.1046/J.1365-2958.2000.01739.X |
0.679 |
|
| 1999 |
Baliga NS, DasSarma S. Saturation mutagenesis of the TATA box and upstream activator sequence in the haloarchaeal bop gene promoter. Journal of Bacteriology. 181: 2513-8. PMID 10198017 DOI: 10.1128/Jb.181.8.2513-2518.1999 |
0.614 |
|
| 1998 |
Ng WV, Ciufo SA, Smith TM, Bumgarner RE, Baskin D, Faust J, Hall B, Loretz C, Seto J, Slagel J, Hood L, DasSarma S. Snapshot of a large dynamic replicon in a halophilic archaeon: megaplasmid or minichromosome? Genome Research. 8: 1131-41. PMID 9847077 DOI: 10.1101/Gr.8.11.1131 |
0.757 |
|
| 1996 |
Kim Jm, DasSarma S. Isolation and chromosomal distribution of natural Z-DNA-forming sequences in Halobacterium halobium. The Journal of Biological Chemistry. 271: 19724-31. PMID 8702677 DOI: 10.1074/jbc.271.33.19724 |
0.707 |
|
| 1996 |
Kim J, Yang C, DasSarma S. Analysis of left-handed Z-DNA formation in short d(CG)n sequences in Escherichia coli and Halobacterium halobium plasmids. Stabilization by increasing repeat length and DNA supercoiling but not salinity. The Journal of Biological Chemistry. 271: 9340-6. PMID 8621598 DOI: 10.1074/jbc.271.16.9340 |
0.685 |
|
| 1996 |
Yang CF, Kim JM, Molinari E, DasSarma S. Genetic and topological analyses of the bop promoter of Halobacterium halobium: stimulation by DNA supercoiling and non-B-DNA structure. Journal of Bacteriology. 178: 840-5. PMID 8550521 |
0.805 |
|
| 1993 |
Halladay JT, Jones JG, Lin F, MacDonald AB, DasSarma S. The rightward gas vesicle operon in Halobacterium plasmid pNRC100: identification of the gvpA and gvpC gene products by use of antibody probes and genetic analysis of the region downstream of gvpC. Journal of Bacteriology. 175: 684-92. PMID 8423144 DOI: 10.1128/Jb.175.3.684-692.1993 |
0.797 |
|
| 1993 |
Ng WL, DasSarma S. Minimal replication origin of the 200-kilobase Halobacterium plasmid pNRC100 Journal of Bacteriology. 175: 4584-4596. PMID 8335618 |
0.309 |
|
| 1992 |
Halladay JT, Ng WL, DasSarma S. Genetic transformation of a halophilic archaebacterium with a gas vesicle gene cluster restores its ability to float. Gene. 119: 131-6. PMID 1398080 DOI: 10.1016/0378-1119(92)90078-4 |
0.786 |
|
| 1991 |
Jones JG, Young DC, DasSarma S. Structure and organization of the gas vesicle gene cluster on the Halobacterium halobium plasmid pNRC100 Gene. 102: 117-122. PMID 1864501 DOI: 10.1016/0378-1119(91)90549-Q |
0.384 |
|
| 1991 |
Ng WL, Kothakota S, DasSarma S. Structure of the gas vesicle plasmid in Halobacterium halobium: Inversion isomers, inverted repeats, and insertion sequences Journal of Bacteriology. 173: 1958-1964. PMID 1848217 DOI: 10.1128/jb.173.6.1958-1964.1991 |
0.327 |
|
| 1990 |
Hackett NR, Krebs MP, DasSarma S, Goebel W, RajBhandary UL, Khorana HG. Nucleotide sequence of a high copy number plasmid from Halobacterium strain GRB. Nucleic Acids Research. 18: 3408. PMID 2356134 DOI: 10.1093/Nar/18.11.3408 |
0.758 |
|
| 1990 |
Yang CF, DasSarma S. Transcriptional induction of purple membrane and gas vesicle synthesis in the archaebacterium Halobacterium halobium is blocked by a DNA gyrase inhibitor. Journal of Bacteriology. 172: 4118-21. PMID 2163398 |
0.717 |
|
| 1989 |
Jones JG, Hackett NR, Halladay JT, Scothorn DJ, Yang CF, Ng WL, DasSarma S. Analysis of insertion mutants reveals two new genes in the pNRC100 gas vesicle gene cluster of Halobacterium halobium. Nucleic Acids Research. 17: 7785-93. PMID 2552415 DOI: 10.1093/Nar/17.19.7785 |
0.803 |
|
| 1988 |
Dassarma S, Halladay JT, Jones JG, Donovan JW, Giannasca PJ, de Marsac NT. High-frequency mutations in a plasmid-encoded gas vesicle gene in Halobacterium halobium. Proceedings of the National Academy of Sciences of the United States of America. 85: 6861-5. PMID 16593983 DOI: 10.1073/Pnas.85.18.6861 |
0.795 |
|
| 1987 |
DasSarma S, Damerval T, Jones JG, Marsac NTd. A plasmid‐encoded gas vesicle protein gene in a halophilic archaebacterium Molecular Microbiology. 1: 365-370. PMID 3448465 DOI: 10.1111/j.1365-2958.1987.tb01943.x |
0.394 |
|
| 1986 |
Tischer E, DasSarma S, Goodman HM. Nucleotide sequence of an alfalfa glutamine synthetase gene Mgg Molecular & General Genetics. 203: 221-229. DOI: 10.1007/Bf00333958 |
0.348 |
|
| 1984 |
Dassarma S, Rajbhandary UL, Khorana HG. Bacterio-opsin mRNA in wild-type and bacterio-opsin-deficient Halobacterium halobium strains. Proceedings of the National Academy of Sciences of the United States of America. 81: 125-9. PMID 16593404 DOI: 10.1073/Pnas.81.1.125 |
0.672 |
|
| 1983 |
DasSarma S, RajBhandary UL, Khorana HG. High-frequency spontaneous mutation in the bacterio-opsin gene in Halobacterium halobium is mediated by transposable elements. Proceedings of the National Academy of Sciences of the United States of America. 80: 2201-5. PMID 6300900 DOI: 10.1073/Pnas.80.8.2201 |
0.704 |
|
| 1982 |
Simsek M, DasSarma S, RajBhandary UL, Khorana HG. A transposable element from Halobacterium halobium which inactivates the bacteriorhodopsin gene. Proceedings of the National Academy of Sciences of the United States of America. 79: 7268-72. PMID 6296826 DOI: 10.1073/Pnas.79.23.7268 |
0.673 |
|
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