Judith Eisen - Publications

Affiliations: 
University of Oregon, Eugene, OR, United States 

72 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Goode C, Voeun M, Ncube D, Eisen J, Washbourne P, Tallafuss A. Late onset of Synaptotagmin 2a expression at synapses relevant to social behavior. The Journal of Comparative Neurology. PMID 33491202 DOI: 10.1002/cne.25084  1
2019 Ganz J, Melancon E, Wilson C, Amores A, Batzel P, Strader M, Braasch I, Diba P, Kuhlman JA, Postlethwait JH, Eisen JS. Epigenetic factors Dnmt1 and Uhrf1 coordinate intestinal development. Developmental Biology. PMID 31394080 DOI: 10.1016/J.Ydbio.2019.08.002  1
2018 Spiewak JE, Bain EJ, Liu J, Kou K, Sturiale SL, Patterson LB, Diba P, Eisen JS, Braasch I, Ganz J, Parichy DM. Evolution of Endothelin signaling and diversification of adult pigment pattern in Danio fishes. Plos Genetics. 14: e1007538. PMID 30226839 DOI: 10.1371/Journal.Pgen.1007538  1
2018 Stednitz SJ, McDermott EM, Ncube D, Tallafuss A, Eisen JS, Washbourne P. Forebrain Control of Behaviorally Driven Social Orienting in Zebrafish. Current Biology : Cb. 28: 2445-2451.e3. PMID 30057306 DOI: 10.1016/J.Cub.2018.06.016  1
2018 Troll JV, Hamilton MK, Abel ML, Ganz J, Bates JM, Stephens WZ, Melancon E, van der Vaart M, Meijer AH, Distel M, Eisen JS, Guillemin K. Microbiota promote secretory cell determination in the intestinal epithelium by modulating host Notch signaling. Development (Cambridge, England). 145. PMID 29475973 DOI: 10.1242/Dev.155317  1
2017 Stainier DYR, Raz E, Lawson ND, Ekker SC, Burdine RD, Eisen JS, Ingham PW, Schulte-Merker S, Yelon D, Weinstein BM, Mullins MC, Wilson SW, Ramakrishnan L, Amacher SL, Neuhauss SCF, et al. Guidelines for morpholino use in zebrafish. Plos Genetics. 13: e1007000. PMID 29049395 DOI: 10.1371/Journal.Pgen.1007000  1
2017 Fowler DK, Stewart S, Seredick S, Eisen JS, Stankunas K, Washbourne P. Correction: A MultiSite Gateway Toolkit for Rapid Cloning of Vertebrate Expression Constructs with Diverse Research Applications. Plos One. 12: e0176543. PMID 28426753 DOI: 10.1371/journal.pone.0176543  1
2017 Rolig AS, Mittge EK, Ganz J, Troll JV, Melancon E, Wiles TJ, Alligood K, Stephens WZ, Eisen JS, Guillemin K. The enteric nervous system promotes intestinal health by constraining microbiota composition. Plos Biology. 15: e2000689. PMID 28207737 DOI: 10.1371/Journal.Pbio.2000689  1
2017 Melancon E, Gomez De La Torre Canny S, Sichel S, Kelly M, Wiles TJ, Rawls JF, Eisen JS, Guillemin K. Best practices for germ-free derivation and gnotobiotic zebrafish husbandry. Methods in Cell Biology. 138: 61-100. PMID 28129860 DOI: 10.1016/Bs.Mcb.2016.11.005  1
2016 Taylor CR, Montagne WA, Eisen JS, Ganz J. Molecular fingerprinting delineates progenitor populations in the developing zebrafish enteric nervous system. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 245: 1081-1096. PMID 27565577 DOI: 10.1002/dvdy.24438  1
2016 Fowler DK, Stewart S, Seredick S, Eisen JS, Stankunas K, Washbourne P. A MultiSite Gateway Toolkit for Rapid Cloning of Vertebrate Expression Constructs with Diverse Research Applications. Plos One. 11: e0159277. PMID 27500400 DOI: 10.1371/Journal.Pone.0159277  1
2016 Wiles TJ, Jemielita M, Baker RP, Schlomann BH, Logan SL, Ganz J, Melancon E, Eisen JS, Guillemin K, Parthasarathy R. Host Gut Motility Promotes Competitive Exclusion within a Model Intestinal Microbiota. Plos Biology. 14: e1002517. PMID 27458727 DOI: 10.1371/Journal.Pbio.1002517  1
2016 Varga ZM, Lawrence C, Ekker SC, Eisen JS. Universal Healthcare for Zebrafish. Zebrafish. 13: S1-4. PMID 27351616 DOI: 10.1089/Zeb.2016.1311  1
2016 Lawrence C, Eisen JS, Varga ZM. Husbandry and Health Program Survey Synopsis. Zebrafish. 13: S5-7. PMID 27248568 DOI: 10.1089/Zeb.2016.1309  1
2015 Tallafuss A, Kelly M, Gay L, Gibson D, Batzel P, Karfilis KV, Eisen J, Stankunas K, Postlethwait JH, Washbourne P. Transcriptomes of post-mitotic neurons identify the usage of alternative pathways during adult and embryonic neuronal differentiation. Bmc Genomics. 16: 1100. PMID 26699284 DOI: 10.1186/S12864-015-2215-8  1
2014 Seredick S, Hutchinson SA, Van Ryswyk L, Talbot JC, Eisen JS. Lhx3 and Lhx4 suppress Kolmer-Agduhr interneuron characteristics within zebrafish axial motoneurons. Development (Cambridge, England). 141: 3900-9. PMID 25231761 DOI: 10.1242/Dev.105718  1
2014 Van Ryswyk L, Simonson L, Eisen JS. The role of inab in axon morphology of an identified zebrafish motoneuron. Plos One. 9: e88631. PMID 24533123 DOI: 10.1371/journal.pone.0088631  1
2013 Simonson LW, Ganz J, Melancon E, Eisen JS. Characterization of enteric neurons in wild-type and mutant zebrafish using semi-automated cell counting and co-expression analysis. Zebrafish. 10: 147-53. PMID 23297729 DOI: 10.1089/zeb.2012.0811  1
2012 Seredick SD, Van Ryswyk L, Hutchinson SA, Eisen JS. Zebrafish Mnx proteins specify one motoneuron subtype and suppress acquisition of interneuron characteristics. Neural Development. 7: 35. PMID 23122226 DOI: 10.1186/1749-8104-7-35  1
2012 Tallafuss A, Gibson D, Morcos P, Li Y, Seredick S, Eisen J, Washbourne P. Turning gene function ON and OFF using sense and antisense photo-morpholinos in zebrafish. Development (Cambridge, England). 139: 1691-9. PMID 22492359 DOI: 10.1242/dev.072702  1
2011 Hale LA, Fowler DK, Eisen JS. Netrin signaling breaks the equivalence between two identified zebrafish motoneurons revealing a new role of intermediate targets. Plos One. 6: e25841. PMID 22003409 DOI: 10.1371/Journal.Pone.0025841  1
2011 Honjo Y, Payne L, Eisen JS. Somatosensory mechanisms in zebrafish lacking dorsal root ganglia. Journal of Anatomy. 218: 271-6. PMID 21235542 DOI: 10.1111/j.1469-7580.2010.01337.x  1
2009 Tallafuss A, Trepman A, Eisen JS. DeltaA mRNA and protein distribution in the zebrafish nervous system. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 238: 3226-36. PMID 19924821 DOI: 10.1002/dvdy.22136  1
2008 Tallafuss A, Eisen JS. The Met receptor tyrosine kinase prevents zebrafish primary motoneurons from expressing an incorrect neurotransmitter. Neural Development. 3: 18. PMID 18664287 DOI: 10.1186/1749-8104-3-18  1
2008 Honjo Y, Kniss J, Eisen JS. Neuregulin-mediated ErbB3 signaling is required for formation of zebrafish dorsal root ganglion neurons. Development (Cambridge, England). 135: 2615-25. PMID 18599505 DOI: 10.1242/Dev.022178  0.01
2008 Eisen JS, Smith JC. Controlling morpholino experiments: don't stop making antisense. Development (Cambridge, England). 135: 1735-43. PMID 18403413 DOI: 10.1242/Dev.001115  0.04
2008 Takayama S, Hostick U, Haendel M, Eisen J, Darimont B. An F-domain introduced by alternative splicing regulates activity of the zebrafish thyroid hormone receptor alpha. General and Comparative Endocrinology. 155: 176-89. PMID 17583703 DOI: 10.1016/J.Ygcen.2007.04.012  1
2007 Hutchinson SA, Cheesman SE, Hale LA, Boone JQ, Eisen JS. Nkx6 proteins specify one zebrafish primary motoneuron subtype by regulating late islet1 expression. Development (Cambridge, England). 134: 1671-7. PMID 17376808 DOI: 10.1242/Dev.02826  1
2007 Kuhlman J, Eisen JS. Genetic screen for mutations affecting development and function of the enteric nervous system. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 236: 118-27. PMID 17131406 DOI: 10.1002/dvdy.21033  0.01
2007 Honjo Y, Eisen J. Neural crest migration and dorsal root ganglia formation in zebrafish erbB3 mutant Developmental Biology. 306: 369-370. DOI: 10.1016/J.Ydbio.2007.03.402  1
2007 Eisen J, Honjo Y. WITHDRAWN: Neural crest migration and dorsal root ganglia formation in zebrafish erbB3 mutant Developmental Biology. DOI: 10.1016/J.Ydbio.2007.03.397  1
2006 Hutchinson SA, Eisen JS. Islet1 and Islet2 have equivalent abilities to promote motoneuron formation and to specify motoneuron subtype identity. Development (Cambridge, England). 133: 2137-47. PMID 16672347 DOI: 10.1242/Dev.02355  1
2006 Hale LA, Tallafuss A, Yan YL, Dudley L, Eisen JS, Postlethwait JH. Characterization of the retinoic acid receptor genes raraa, rarab and rarg during zebrafish development. Gene Expression Patterns : Gep. 6: 546-55. PMID 16455309 DOI: 10.1016/J.Modgep.2005.10.007  1
2006 Tallafuss A, Hale LA, Yan YL, Dudley L, Eisen JS, Postlethwait JH. Characterization of retinoid-X receptor genes rxra, rxrba, rxrbb and rxrg during zebrafish development. Gene Expression Patterns : Gep. 6: 556-65. PMID 16448862 DOI: 10.1016/J.Modgep.2005.10.005  1
2005 Honjo Y, Eisen JS. Slow muscle regulates the pattern of trunk neural crest migration in zebrafish. Development (Cambridge, England). 132: 4461-70. PMID 16162652 DOI: 10.1242/dev.02026  1
2005 Lewis KE, Bates J, Eisen JS. Regulation of iro3 expression in the zebrafish spinal cord. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 232: 140-8. PMID 15580554 DOI: 10.1002/dvdy.20215  1
2004 Cheesman SE, Eisen JS. gsh1 demarcates hypothalamus and intermediate spinal cord in zebrafish. Gene Expression Patterns : Gep. 5: 107-12. PMID 15533825 DOI: 10.1016/J.Modgep.2004.05.006  1
2004 Cheesman SE, Layden MJ, Von Ohlen T, Doe CQ, Eisen JS. Zebrafish and fly Nkx6 proteins have similar CNS expression patterns and regulate motoneuron formation. Development (Cambridge, England). 131: 5221-32. PMID 15456722 DOI: 10.1242/Dev.01397  1
2004 Lewis KE, Eisen JS. Paraxial mesoderm specifies zebrafish primary motoneuron subtype identity. Development (Cambridge, England). 131: 891-902. PMID 14757641 DOI: 10.1242/dev.00981  1
2004 Reyes R, Haendel M, Grant D, Melancon E, Eisen JS. Slow degeneration of zebrafish Rohon-Beard neurons during programmed cell death. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 229: 30-41. PMID 14699575 DOI: 10.1002/Dvdy.10488  1
2003 Appel B, Eisen JS. Retinoids run rampant: multiple roles during spinal cord and motor neuron development. Neuron. 40: 461-4. PMID 14642271 DOI: 10.1016/S0896-6273(03)00688-3  1
2003 Eisen J. Zebrafish as a model system. Perspective. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 228: 299-300. PMID 14579369 DOI: 10.1002/dvdy.10410  0.01
2003 Lewis KE, Eisen JS. From cells to circuits: development of the zebrafish spinal cord. Progress in Neurobiology. 69: 419-49. PMID 12880634  1
2002 Grunwald DJ, Eisen JS. Headwaters of the zebrafish -- emergence of a new model vertebrate. Nature Reviews. Genetics. 3: 717-24. PMID 12209146 DOI: 10.1038/nrg892  1
2002 Morin-Kensicki EM, Melancon E, Eisen JS. Segmental relationship between somites and vertebral column in zebrafish. Development (Cambridge, England). 129: 3851-60. PMID 12135923  1
2001 Varga ZM, Amores A, Lewis KE, Yan YL, Postlethwait JH, Eisen JS, Westerfield M. Zebrafish smoothened functions in ventral neural tube specification and axon tract formation. Development (Cambridge, England). 128: 3497-509. PMID 11566855  1
2001 Gray M, Moens CB, Amacher SL, Eisen JS, Beattie CE. Zebrafish deadly seven functions in neurogenesis. Developmental Biology. 237: 306-23. PMID 11543616 DOI: 10.1006/Dbio.2001.0381  1
2000 Beattie CE, Melancon E, Eisen JS. Mutations in the stumpy gene reveal intermediate targets for zebrafish motor axons. Development (Cambridge, England). 127: 2653-62. PMID 10821763  1
1999 Appel B, Fritz A, Westerfield M, Grunwald DJ, Eisen JS, Riley BB. Delta-mediated specification of midline cell fates in zebrafish embryos. Current Biology : Cb. 9: 247-56. PMID 10074451 DOI: 10.1016/S0960-9822(99)80113-4  1
1999 Beattie CE, Raible DW, Henion PD, Eisen JS. Early pressure screens. Methods in Cell Biology. 60: 71-86. PMID 9891331 DOI: 10.1016/S0091-679X(08)61894-4  1
1997 Bisgrove BW, Raible DW, Walter V, Eisen JS, Grunwald DJ. Expression of c-ret in the zebrafish embryo: potential roles in motoneuronal development. Journal of Neurobiology. 33: 749-68. PMID 9369149 DOI: 10.1002/(Sici)1097-4695(19971120)33:6<749::Aid-Neu4>3.0.Co;2-9  1
1997 Melançon E, Liu DW, Westerfield M, Eisen JS. Pathfinding by identified zebrafish motoneurons in the absence of muscle pioneers. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 17: 7796-804. PMID 9315900 DOI: 10.1523/Jneurosci.17-20-07796.1997  1
1997 Beattie CE, Hatta K, Halpern ME, Liu H, Eisen JS, Kimmel CB. Temporal separation in the specification of primary and secondary motoneurons in zebrafish. Developmental Biology. 187: 171-82. PMID 9242415 DOI: 10.1006/Dbio.1997.8604  1
1997 Beattie CE, Eisen JS. Notochord alters the permissiveness of myotome for pathfinding by an identified motoneuron in embryonic zebrafish. Development (Cambridge, England). 124: 713-20. PMID 9043086  1
1996 Devoto SH, Melançon E, Eisen JS, Westerfield M. Identification of separate slow and fast muscle precursor cells in vivo, prior to somite formation. Development (Cambridge, England). 122: 3371-80. PMID 8951054  1
1996 Henion PD, Raible DW, Beattie CE, Stoesser KL, Weston JA, Eisen JS. Screen for mutations affecting development of Zebrafish neural crest. Developmental Genetics. 18: 11-7. PMID 8742830 DOI: 10.1002/(Sici)1520-6408(1996)18:1<11::Aid-Dvg2>3.0.Co;2-4  1
1996 Raible DW, Eisen JS. Regulative interactions in zebrafish neural crest. Development (Cambridge, England). 122: 501-7. PMID 8625801  1
1995 Raible DW, Eisen JS. Lateral specification of cell fate during vertebrate development. Current Opinion in Genetics & Development. 5: 444-9. PMID 7580135 DOI: 10.1016/0959-437X(95)90047-K  1
1994 Postlethwait JH, Johnson SL, Midson CN, Talbot WS, Gates M, Ballinger EW, Africa D, Andrews R, Carl T, Eisen JS. A genetic linkage map for the zebrafish. Science (New York, N.Y.). 264: 699-703. PMID 8171321 DOI: 10.1126/Science.8171321  1
1994 Raible DW, Eisen JS. Restriction of neural crest cell fate in the trunk of the embryonic zebrafish. Development (Cambridge, England). 120: 495-503. PMID 8162850  1
1992 Raible DW, Wood A, Hodsdon W, Henion PD, Weston JA, Eisen JS. Segregation and early dispersal of neural crest cells in the embryonic zebrafish. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 195: 29-42. PMID 1292751 DOI: 10.1002/Aja.1001950104  1
1988 Westerfield M, Eisen JS. Neuromuscular specificity: pathfinding by identified motor growth cones in a vertebrate embryo. Trends in Neurosciences. 11: 18-22. PMID 2469149 DOI: 10.1016/0166-2236(88)90044-6  1
1986 Eisen JS, Myers PZ, Westerfield M. Pathway selection by growth cones of identified motoneurones in live zebra fish embryos. Nature. 320: 269-71. PMID 3960108 DOI: 10.1038/320269A0  1
1986 Myers PZ, Eisen JS, Westerfield M. Development and axonal outgrowth of identified motoneurons in the zebrafish. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 6: 2278-89. PMID 3746410 DOI: 10.1523/Jneurosci.06-08-02278.1986  1
1986 Westerfield M, McMurray JV, Eisen JS. Identified motoneurons and their innervation of axial muscles in the zebrafish. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 6: 2267-77. PMID 3746409 DOI: 10.1523/Jneurosci.06-08-02267.1986  1
1985 Westerfield M, Eisen JS. The growth of motor axons in the spinal cord of Xenopus embryos. Developmental Biology. 109: 96-101. PMID 2985458 DOI: 10.1016/0012-1606(85)90349-5  1
1984 Beltz B, Eisen JS, Flamm R, Harris-Warrick RM, Hooper SL, Marder E. Serotonergic innervation and modulation of the stomatogastric ganglion of three decapod crustaceans (Panulirus interruptus, Homarus americanus and Cancer irroratus). The Journal of Experimental Biology. 109: 35-54. PMID 6376680  1
1984 Eisen JS, Marder E. A mechanism for production of phase shifts in a pattern generator. Journal of Neurophysiology. 51: 1375-93. PMID 6145759  1
1984 Marder E, Eisen JS. Electrically coupled pacemaker neurons respond differently to same physiological inputs and neurotransmitters. Journal of Neurophysiology. 51: 1362-74. PMID 6145758  1
1984 Marder E, Eisen JS. Transmitter identification of pyloric neurons: electrically coupled neurons use different transmitters. Journal of Neurophysiology. 51: 1345-61. PMID 6145757  1
1982 Eisen JS, Marder E. Mechanisms underlying pattern generation in lobster stomatogastric ganglion as determined by selective inactivation of identified neurons. III. Synaptic connections of electrically coupled pyloric neurons. Journal of Neurophysiology. 48: 1392-1415. PMID 6296329 DOI: 10.1152/Jn.1982.48.6.1392  1
1981 Lingle C, Eisen JS, Marder E. Block of glutamatergic excitatory synaptic channels by chlorisondamine. Molecular Pharmacology. 19: 349-53. PMID 7231394  1
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