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Dawei Lin - Publications

Affiliations: 
1996-1998 Protein Data Bank Brookhaven National Laboratory, Upton, NY, United States 
 2013- NIAID National Institutes of Health, Bethesda, MD 
Area:
bioinformatics
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22 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Lin DW, Chung BP, Huang JW, Wang X, Huang L, Kaiser P. Microhomology based CRISPR tagging tools for protein tracking, purification, and depletion. The Journal of Biological Chemistry. PMID 31138654 DOI: 10.1074/Jbc.Ra119.008422  0.302
2012 You FM, Deal KR, Wang J, Britton MT, Fass JN, Lin D, Dandekar AM, Leslie CA, Aradhya M, Luo MC, Dvorak J. Genome-wide SNP discovery in walnut with an AGSNP pipeline updated for SNP discovery in allogamous organisms. Bmc Genomics. 13: 354. PMID 22849334 DOI: 10.1186/1471-2164-13-354  0.31
2012 Martinelli F, Uratsu SL, Albrecht U, Reagan RL, Phu ML, Britton M, Buffalo V, Fass J, Leicht E, Zhao W, Lin D, D'Souza R, Davis CE, Bowman KD, Dandekar AM. Transcriptome profiling of citrus fruit response to huanglongbing disease. Plos One. 7: e38039. PMID 22675433 DOI: 10.1371/Journal.Pone.0038039  0.313
2011 Fass JN, Joshi NA, Couvillion MT, Bowen J, Gorovsky MA, Hamilton EP, Orias E, Hong K, Coyne RS, Eisen JA, Chalker DL, Lin D, Collins K. Genome-Scale Analysis of Programmed DNA Elimination Sites in Tetrahymena thermophila. G3 (Bethesda, Md.). 1: 515-22. PMID 22384362 DOI: 10.1534/G3.111.000927  0.312
2011 Ahmad R, Parfitt DE, Fass J, Ogundiwin E, Dhingra A, Gradziel TM, Lin D, Joshi NA, Martinez-Garcia PJ, Crisosto CH. Whole genome sequencing of peach (Prunus persica L.) for SNP identification and selection. Bmc Genomics. 12: 569. PMID 22108025 DOI: 10.1186/1471-2164-12-569  0.308
2011 Earl D, Bradnam K, St John J, Darling A, Lin D, Fass J, Yu HO, Buffalo V, Zerbino DR, Diekhans M, Nguyen N, Ariyaratne PN, Sung WK, Ning Z, Haimel M, et al. Assemblathon 1: a competitive assessment of de novo short read assembly methods. Genome Research. 21: 2224-41. PMID 21926179 DOI: 10.1101/Gr.126599.111  0.317
2011 Ono NN, Britton MT, Fass JN, Nicolet CM, Lin D, Tian L. Exploring the Transcriptome Landscape of Pomegranate Fruit Peel for Natural Product Biosynthetic Gene and SSR Marker Discovery(F). Journal of Integrative Plant Biology. 53: 800-13. PMID 21910825 DOI: 10.1111/J.1744-7909.2011.01073.X  0.316
2011 Ho BT, Shih S, Singh SP, Diaz MO, Lin D, Buffalo V, Fass J, Vaughan AT. Clonal MLL Fusions with a Signature of Activation Induced Cytidine Deaminase Activity, Blood. 118: 3444-3444. DOI: 10.1182/Blood.V118.21.3444.3444  0.309
2007 Malhi RS, Sickler B, Lin D, Satkoski J, Tito RY, George D, Kanthaswamy S, Smith DG. MamuSNP: a resource for Rhesus Macaque (Macaca mulatta) genomics. Plos One. 2: e438. PMID 17487284 DOI: 10.1371/Journal.Pone.0000438  0.305
2006 Wang Y, Li W, Zhang T, Ding C, Lu Z, Long N, Rose JP, Wang BC, Lin D. Reconstruction of ancient genome and gene order from complete microbial genome sequences. Journal of Theoretical Biology. 239: 494-8. PMID 16188276 DOI: 10.1016/J.Jtbi.2005.08.013  0.312
2006 Sussman JL, Lin D, Jiang J-, Manning NO, Prilusky J, Abola EE. The Protein Data Bank at Brookhaven International Tables For Crystallography. 649-656. DOI: 10.1107/97809553602060000718  0.568
2005 Kataeva I, Chang J, Xu H, Luan CH, Zhou J, Uversky VN, Lin D, Horanyi P, Liu ZJ, Ljungdahl LG, Rose J, Luo M, Wang BC. Improving solubility of Shewanella oneidensis MR-1 and Clostridium thermocellum JW-20 proteins expressed into Esherichia coli. Journal of Proteome Research. 4: 1942-51. PMID 16335938 DOI: 10.1021/Pr050108J  0.371
2005 Wang BC, Adams MW, Dailey H, DeLucas L, Luo M, Rose J, Bunzel R, Dailey T, Habel J, Horanyi P, Jenney FE, Kataeva I, Lee HS, Li S, Li T, ... Lin D, et al. Protein production and crystallization at SECSG -- an overview. Journal of Structural and Functional Genomics. 6: 233-43. PMID 16211524 DOI: 10.1007/S10969-005-2462-Z  0.386
2005 Liu ZJ, Shah AK, Habel JE, Ng JD, Kataeva I, Xu H, Horanyi P, Yang H, Chang J, Zhao M, Huang L, Chang S, Tempel W, Chen L, Zhou W, ... ... Lin D, et al. Salvaging Pyrococcus furiosus protein targets at SECSG. Journal of Structural and Functional Genomics. 6: 121-7. PMID 16211508 DOI: 10.1007/S10969-005-5242-X  0.39
2005 Liu ZJ, Tempel W, Ng JD, Lin D, Shah AK, Chen L, Horanyi PS, Habel JE, Kataeva IA, Xu H, Yang H, Chang JC, Huang L, Chang SH, Zhou W, et al. The high-throughput protein-to-structure pipeline at SECSG. Acta Crystallographica. Section D, Biological Crystallography. 61: 679-84. PMID 15930619 DOI: 10.1107/S0907444905013132  0.388
2005 Liu ZJ, Lin D, Tempel W, Praissman JL, Rose JP, Wang BC. Parameter-space screening: a powerful tool for high-throughput crystal structure determination. Acta Crystallographica. Section D, Biological Crystallography. 61: 520-7. PMID 15858261 DOI: 10.1107/S0907444905003239  0.322
2005 Pusey ML, Liu ZJ, Tempel W, Praissman J, Lin D, Wang BC, Gavira JA, Ng JD. Life in the fast lane for protein crystallization and X-ray crystallography. Progress in Biophysics and Molecular Biology. 88: 359-86. PMID 15652250 DOI: 10.1016/J.Pbiomolbio.2004.07.011  0.419
2000 Lin D, Manning NO, Jiang J, Abola EE, Stampf D, Prilusky J, Sussman JL. AutoDep: A web-based system for deposition and validation of macromolecular structural Acta Crystallographica Section D: Biological Crystallography. 56: 828-841. PMID 10930830 DOI: 10.1107/S0907444900005655  0.541
1999 Sussman JL, Abola EE, Lin D, Jiang J, Manning NO, Prilusky J. The protein data bank: Bridging the gap between the sequence and 3D structure world Genetica. 106: 149-158. PMID 10710721 DOI: 10.1023/A:1003753517358  0.55
1999 Burley SK, Almo SC, Bonanno JB, Capel M, Chance MR, Gaasterland T, Lin D, Sali A, Studier FW, Swaminathan S. Structural genomics: beyond the human genome project. Nature Genetics. 23: 151-7. PMID 10508510 DOI: 10.1038/13783  0.345
1999 Sussman JL, Abola EE, Lin D, Jiang J, Manning NO, Prilusky J. The protein data bank Genetica. 106: 441-441. DOI: 10.1007/978-1-4899-0375-4_26  0.569
1998 Sussman JL, Lin D, Jiang J, Manning NO, Prilusky J, Ritter O, Abola EE. Protein Data Bank (PDB): Database of three-dimensional structural information of biological macromolecules Acta Crystallographica Section D: Biological Crystallography. 54: 1078-1084. PMID 10089483 DOI: 10.1107/S0907444998009378  0.566
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