Joel R. Neilson, Ph.D. - Related publications

2004 Stanford University, Palo Alto, CA 
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 Whipple AJ, Breton-Provencher V, Jacobs HN, Chitta UK, Sur M, Sharp PA. Imprinted Maternally Expressed microRNAs Antagonize Paternally Driven Gene Programs in Neurons. Molecular Cell. PMID 32032531 DOI: 10.1016/j.molcel.2020.01.020   
2020 Zhou H, Xiang Y, Hu M, Xu Y, Hou Y, Qi X, Fu L, Luan Y, Wang Z, Li X, Zhao Y, Zhao S. Chromatin accessibility is associated with the changed expression of miRNAs that target members of the Hippo pathway during myoblast differentiation. Cell Death & Disease. 11: 148. PMID 32094347 DOI: 10.1038/s41419-020-2341-3   
2020 Cheng X, Li L, Shi G, Chen L, Fang C, Li M, Li C. MEG3 Promotes Differentiation of Porcine Satellite Cells by Sponging miR-423-5p to Relieve Inhibiting Effect on SRF. Cells. 9. PMID 32075310 DOI: 10.3390/cells9020449   
2020 Yu L, Cen X, Xia K, Huang X, Sun W, Zhao Z, Liu J. microRNA expression profiles and the potential competing endogenous RNA networks in NELL-1-induced human adipose-derived stem cell osteogenic differentiation. Journal of Cellular Biochemistry. PMID 32065449 DOI: 10.1002/jcb.29695   
2020 Cheng Y, Chen T, Song J, Qi Q, Wang C, Xi Q, Liu S, Hao L, Zhang Y. miR-709 inhibits GHRP6 induced GH synthesis by targeting PRKCA in pituitary. Molecular and Cellular Endocrinology. 110763. PMID 32084499 DOI: 10.1016/j.mce.2020.110763   
2020 Foreman R, Wollman R. Mammalian gene expression variability is explained by underlying cell state. Molecular Systems Biology. 16: e9146. PMID 32043799 DOI: 10.15252/msb.20199146   
2020 Jung HJ, Park EJ, Choi HJ, Kwon TH. Regulation of aquaporin-2 by RNA interference. Vitamins and Hormones. 112: 119-145. PMID 32061338 DOI: 10.1016/bs.vh.2019.08.003   
2020 Wu Y, Zhang F, Lu R, Feng Y, Li X, Zhang S, Hou W, Tian J, Kong X, Sun L. Functional lncRNA-miRNA-mRNA networks in rabbit carotid atherosclerosis. Aging. 12. PMID 32045883 DOI: 10.18632/aging.102778   
2020 Xu H, Wang X, Wang Z, Li J, Xu Z, Miao M, Chen G, Lei X, Wu J, Shi H, Wang K, Zhang T, Sun X. MicroRNA expression profile analysis in sperm reveals hsa-mir-191 as an auspicious omen of in vitro fertilization. Bmc Genomics. 21: 165. PMID 32066367 DOI: 10.1186/s12864-020-6570-8   
2020 Dong Z, Luo M, Wang L, Yin H, Zhu W, Fu J. MicroRNA-206 Regulation of Skin Pigmentation in Koi Carp ( L.). Frontiers in Genetics. 11: 47. PMID 32117457 DOI: 10.3389/fgene.2020.00047   
2020 Hanwei J, Nie X, Zhu H, Li B, Pang F, Yang X, Cao R, Yang X, Zhu S, Peng D, Li Y, Li G, Zhang Z, Huang H, Xu K, et al. miR-146b-5p Plays a Critical Role in the Regulation of Autophagy in ∆per -Infected RAW264.7 Cells. Biomed Research International. 2020: 1953242. PMID 32051823 DOI: 10.1155/2020/1953242   
2020 Hu MH, Zheng SX, Yin H, Zhu XY, Lu FT, Tong XH, Liu YS, Zhang YW, Xu B. Identification of microRNAs that Regulate the MAPK Pathway in Human Cumulus Cells from PCOS Women with Insulin Resistance. Reproductive Sciences (Thousand Oaks, Calif.). PMID 32046427 DOI: 10.1007/s43032-019-00086-5   
2020 Yang F, Huang X, Zang R, Chen J, Fidalgo M, Sanchez-Priego C, Yang J, Caichen A, Ma F, Macfarlan T, Wang H, Gao S, Zhou H, Wang J. DUX-miR-344-ZMYM2-Mediated Activation of MERVL LTRs Induces a Totipotent 2C-like State. Cell Stem Cell. 26: 234-250.e7. PMID 32032525 DOI: 10.1016/j.stem.2020.01.004   
2020 Liu K, Wang BJ, Han W, Chi CH, Gu C, Wang Y, Fu X, Huang W, Liu Z, Song X. CFIm25-regulated lncRNA acv3UTR promotes gastric tumorigenesis via miR-590-5p/YAP1 axis. Oncogene. PMID 32066878 DOI: 10.1038/s41388-020-1213-8   
2020 Wu C, Tong L, Wu C, Chen D, Chen J, Li Q, Jia F, Huang Z. Two miRNA prognostic signatures of head and neck squamous cell carcinoma: A bioinformatic analysis based on the TCGA dataset. Cancer Medicine. PMID 32064753 DOI: 10.1002/cam4.2915   
2020 Erickson RJB, Bandyopadhyay AA, Barnes AMT, O'Brien SA, Hu WS, Dunny GM. Single-Cell Analysis Reveals that the Enterococcal Sex Pheromone Response Results in Expression of Full-length Conjugation Operon Transcripts in All Induced Cells. Journal of Bacteriology. PMID 32041799 DOI: 10.1128/JB.00685-19   
2020 Awamleh Z, Han VKM. Identification of miR-210-5p in human placentae from pregnancies complicated by preeclampsia and intrauterine growth restriction, and its potential role in the pregnancy complications. Pregnancy Hypertension. 19: 159-168. PMID 32014817 DOI: 10.1016/j.preghy.2020.01.002   
2020 Chiang S, Shinohara H, Huang JH, Tsai HK, Okada M. Inferring the transcriptional regulatory mechanism of signal-dependent gene expression via an integrative computational approach. Febs Letters. PMID 32052437 DOI: 10.1002/1873-3468.13757   
2020 Cao Z, Grima R. Analytical distributions for detailed models of stochastic gene expression in eukaryotic cells. Proceedings of the National Academy of Sciences of the United States of America. PMID 32071224 DOI: 10.1073/pnas.1910888117   
2020 Wilkinson M, Darmanis S, Pisco AO, Huber G. Persistent features of intermittent transcription. Scientific Reports. 10: 3138. PMID 32081955 DOI: 10.1038/s41598-020-60094-3   
2020 Tan JY, Biasini A, Young RS, Marques AC. Splicing of enhancer-associated lincRNAs contributes to enhancer activity. Life Science Alliance. 3. PMID 32086317 DOI: 10.26508/lsa.202000663   
2020 Zhou J, Zhao H, Zhang L, Ye X, Wang Z, Li Q, Ke H, Zhao G, Du J, Yang S, Zhao L. Effects of bacterial haemorrhagic septicemia on the immune response of Leiocassis longirostris by RNA-Seq and microRNA-Seq. Comparative Biochemistry and Physiology. Part D, Genomics & Proteomics. 34: 100659. PMID 32070936 DOI: 10.1016/j.cbd.2020.100659   
2020 Bauersachs S, Mermillod P, Almiñana C. The Oviductal Extracellular Vesicles' RNA Cargo Regulates the Bovine Embryonic Transcriptome. International Journal of Molecular Sciences. 21. PMID 32075098 DOI: 10.3390/ijms21041303   
2020 Ganbarjeddi S, Azimi A, Zadi Heydarabad M, Hemmatzadeh M, Mohammadi S, Mousavi Ardehaie R, Zamani M, Baharaghdam S, Esmaeili S, Ghasemi A. Apoptosis Induced by Prednisolone Occurs without Altering the Promoter Methylation of BAX and BCL-2 Genes in Acute Lymphoblastic Leukemia Cells CCRF-CEM. Asian Pacific Journal of Cancer Prevention : Apjcp. 21: 523-529. PMID 32102534 DOI: 10.31557/APJCP.2020.21.2.523   
2020 Ali MZ, Choubey S, Das D, Brewster RC. Probing Mechanisms of Transcription Elongation Through Cell-to-Cell Variability of RNA Polymerase. Biophysical Journal. PMID 32101716 DOI: 10.1016/j.bpj.2020.02.002   
2020 Zhu T, Fan D, Ye K, Liu B, Cui Z, Liu Z, Tian Y. Role of miRNA-542-5p in the tumorigenesis of osteosarcoma. Febs Open Bio. PMID 32105410 DOI: 10.1002/2211-5463.12824   
2020 Zhang Y, Cao X, Li P, Fan Y, Zhang L, Li W, Liu Y. PSMC6 promotes osteoblast apoptosis through inhibiting PI3K/AKT signaling pathway activation in ovariectomy-induced osteoporosis mouse model. Journal of Cellular Physiology. PMID 32017075 DOI: 10.1002/jcp.29261   
2020 Ullah Y, Li C, Li X, Ni W, Yao R, Xu Y, Quan R, Li H, Zhang M, Liu L, Hu R, Guo T, Li Y, Wang X, Hu S. Identification and Profiling of Pituitary microRNAs of Sheep during Anestrus and Estrus Stages. Animals : An Open Access Journal From Mdpi. 10. PMID 32121341 DOI: 10.3390/ani10030402   
2020 Angelina Hembrom A, Srivastava S, Garg I, Kumar B. MicroRNAs in Venous Thrombo-Embolism. Clinica Chimica Acta; International Journal of Clinical Chemistry. PMID 32017924 DOI: 10.1016/j.cca.2020.01.034   
2020 Kong F, He S, Shen X, Li L, Fang J, Lian M. Integrated analysis of different mRNA and miRNA profiles in human hypopharyngeal squamous cell carcinoma sensitive and resistant to chemotherapy. Neoplasma. PMID 32064881 DOI: 10.4149/neo_2020_190320N249   
2020 Gao J, Dai C, Yu X, Yin XB, Zhou F. Long noncoding RNA LINC00324 exerts protumorigenic effects on liver cancer stem cells by upregulating fas ligand via PU box binding protein. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. PMID 32128906 DOI: 10.1096/fj.201902705RR   
2020 Liu Y, Guo X, Zhao M, Ao H, Leng X, Liu M, Wu C, Ma J, Zhu J. Contributions and prognostic values of m A RNA methylation regulators in non-small-cell lung cancer. Journal of Cellular Physiology. PMID 32052446 DOI: 10.1002/jcp.29531   
2020 Ramzan F, D'Souza RF, Durainayagam BR, Milan AM, Roy NC, Kruger MC, Henry CJ, Mitchell CJ, Cameron-Smith D. Inflexibility of the plasma miRNA response following a high-carbohydrate meal in overweight insulin-resistant women. Genes & Nutrition. 15: 2. PMID 32042348 DOI: 10.1186/s12263-020-0660-8   
2020 Groß A, Chernyakov D, Gallwitz L, Bornkessel N, Edemir B. Deletion of Von Hippel-Lindau Interferes with Hyper Osmolality Induced Gene Expression and Induces an Unfavorable Gene Expression Pattern. Cancers. 12. PMID 32059438 DOI: 10.3390/cancers12020420   
2020 Gutierrez-Arcelus M, Baglaenko Y, Arora J, Hannes S, Luo Y, Amariuta T, Teslovich N, Rao DA, Ermann J, Jonsson AH, , Navarrete C, Rich SS, Taylor KD, Rotter JI, et al. Allele-specific expression changes dynamically during T cell activation in HLA and other autoimmune loci. Nature Genetics. PMID 32066938 DOI: 10.1038/s41588-020-0579-4   
2020 Zhang Y, Zhu L, Wang X. A Network-Based Approach for Identification of Subtype-Specific Master Regulators in Pancreatic Ductal Adenocarcinoma. Genes. 11. PMID 32024063 DOI: 10.3390/genes11020155   
2020 Chuammitri P, Vannamahaxay S, Sornpet B, Pringproa K, Patchanee P. Detection and characterization of microRNA expression profiling and its target genes in response to canine parvovirus in Crandell Reese Feline Kidney cells. Peerj. 8: e8522. PMID 32095352 DOI: 10.7717/peerj.8522   
2020 Xu Y, Liu Y, Xie H, Zhou Y, Yan X, Chen W, Wang X, Yu Z, Wang F, Chen X, Wang J, Han S. Profile analysis reveals endogenous RNAs regulate necrotizing enterocolitis progression. Biomedicine & Pharmacotherapy = Biomedecine & Pharmacotherapie. 125: 109975. PMID 32036223 DOI: 10.1016/j.biopha.2020.109975   
2020 Jiang W, Liu P, Zhang J, Yang W. Identification of Key Candidate Genes and Pathways of -Infected Human Umbilical Vein Endothelial Cells and Drug Screening. Indian Journal of Microbiology. 60: 62-69. PMID 32089575 DOI: 10.1007/s12088-019-00847-5   
2020 Luo R, Zheng Z, Yang C, Zhang X, Cheng L, Su G, Bai C, Li G. Comparative Transcriptome Analysis Provides Insights into the Polyunsaturated Fatty Acid Synthesis Regulation of Transgenic Sheep. International Journal of Molecular Sciences. 21. PMID 32046209 DOI: 10.3390/ijms21031121   
2020 Grondona P, Bucher P, Schmitt A, Schönfeld C, Streibl B, Müller A, Essmann F, Liberatori S, Mohammed S, Hennig A, Kramer D, Schulze-Osthoff K, Hailfinger S. Threonine phosphorylation of IκBζ mediates inhibition of selective proinflammatory target genes. The Journal of Investigative Dermatology. PMID 32035922 DOI: 10.1016/j.jid.2019.12.036   
2020 Binder S, Zipfel I, Friedrich M, Riedel D, Ende S, Kämpf C, Wiedemann K, Buschmann T, Puppel SH, Reiche K, Stadler PF, Horn F. Master and servant: LINC00152 - a STAT3-induced long noncoding RNA regulates STAT3 in a positive feedback in human multiple myeloma. Bmc Medical Genomics. 13: 22. PMID 32041604 DOI: 10.1186/s12920-020-0692-3   
2020 Iminitoff M, Damani T, Williams E, Brooks AES, Feisst V, Sheppard HM. microRNAs in Ex Vivo Human Adipose Tissue Derived Mesenchymal Stromal Cells (ASC) Undergo Rapid Culture-Induced Changes in Expression, Including miR-378 which Promotes Adipogenesis. International Journal of Molecular Sciences. 21. PMID 32098272 DOI: 10.3390/ijms21041492   
2020 Zhou ZX, Chen XM, Zhang YQ, Peng L, Xue XY, Li GX. Comprehensive analysis of long noncoding RNA and mRNA in five colorectal cancer tissues and five normal tissues. Bioscience Reports. 40. PMID 32016349 DOI: 10.1042/BSR20191139   
2020 Hurtado C, Acevedo Sáenz LY, Vásquez Trespalacios EM, Urrego R, Jenks S, Sanz I, Vásquez G. DNA methylation changes on immune cells in Systemic Lupus Erythematosus. Autoimmunity. 1-8. PMID 32019373 DOI: 10.1080/08916934.2020.1722108   
2020 Zhang Y, Huang J, Li X, Fang C, Wang L. Identification of Functional Transcriptional Binding Sites within Chicken Gene Promoter and Screening Its Regulators. Genes. 11. PMID 32050731 DOI: 10.3390/genes11020186   
2020 Giri R, Papadopoulos DK, Posadas DM, Potluri HK, Tomancak P, Mani M, Carthew RW. Ordered patterning of the sensory system is susceptible to stochastic features of gene expression. Elife. 9. PMID 32101167 DOI: 10.7554/eLife.53638   
2020 NandyMazumdar M, Yin S, Paranjapye A, Kerschner JL, Swahn H, Ge A, Leir SH, Harris A. Looping of upstream cis-regulatory elements is required for CFTR expression in human airway epithelial cells. Nucleic Acids Research. PMID 32095812 DOI: 10.1093/nar/gkaa089   
2020 Endo M, Tanaka Y, Otsuka M, Minami Y. E2F1-Ror2 signaling mediates coordinated transcriptional regulation to promote G1/S phase transition in bFGF-stimulated NIH/3T3 fibroblasts. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 34: 3413-3428. PMID 31922321 DOI: 10.1096/fj.201902849R   
2020 Choe HK, Cho J. Comprehensive Genome-Wide Approaches to Activity-Dependent Translational Control in Neurons. International Journal of Molecular Sciences. 21. PMID 32111062 DOI: 10.3390/ijms21051592