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Mark Niedre - Publications

Affiliations: 
Electrical and Computer Engineering Northeastern University, Boston, MA, United States 
Area:
Electronics and Electrical Engineering, Biomedical Engineering
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44 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Patil RA, Srinivasarao M, Amiji MM, Low PS, Niedre M. Fluorescence Labeling of Circulating Tumor Cells with a Folate Receptor-Targeted Molecular Probe for Diffuse In Vivo Flow Cytometry. Molecular Imaging and Biology. PMID 32519245 DOI: 10.1007/S11307-020-01505-9  0.361
2020 Bartosik PB, Fitzgerald JE, El Khatib M, Yaseen MA, Vinogradov SA, Niedre M. Prospects for the Use of Upconverting Nanoparticles as a Contrast Agent for Enumeration of Circulating Cells in vivo. International Journal of Nanomedicine. 15: 1709-1719. PMID 32210561 DOI: 10.2147/Ijn.S243157  0.371
2020 Di W, Tan X, Calderon IAC, Neal Reilly AE, Niedre M, Clark HA. Real-time particle-by-particle detection of erythrocyte-camouflaged microsensor with extended circulation time in the bloodstream. Proceedings of the National Academy of Sciences of the United States of America. PMID 32019879 DOI: 10.1073/Pnas.1914913117  0.343
2019 Patil R, Tan X, Bartosik P, Detappe A, Runnels JM, Ghobrial I, Lin CP, Niedre M. Fluorescence monitoring of rare circulating tumor cell and cluster dissemination in a multiple myeloma xenograft model in vivo. Journal of Biomedical Optics. 24: 1-11. PMID 31456386 DOI: 10.1117/1.Jbo.24.8.085004  0.34
2019 Tan X, Patil R, Bartosik P, Runnels JM, Lin CP, Niedre M. In Vivo Flow Cytometry of Extremely Rare Circulating Cells. Scientific Reports. 9: 3366. PMID 30833671 DOI: 10.1038/S41598-019-40143-2  0.379
2017 Pera V, Tan X, Runnels J, Sardesai N, Lin CP, Niedre M. Diffuse fluorescence fiber probe for in vivo detection of circulating cells. Journal of Biomedical Optics. 22: 37004. PMID 28290598 DOI: 10.1117/1.Jbo.22.3.037004  0.428
2016 Mu Y, Pera V, Niedre M. Multiplexed fluorescence mediated tomography with temporal and spectral data. Journal of Biomedical Optics. 21: 105001. PMID 27699390 DOI: 10.1117/1.Jbo.21.10.105001  0.452
2016 Markovic S, Belz J, Kumar R, Cormack RA, Sridhar S, Niedre M. Near-infrared fluorescence imaging platform for quantifying in vivo nanoparticle diffusion from drug loaded implants. International Journal of Nanomedicine. 11: 1213-23. PMID 27069363 DOI: 10.2147/Ijn.S93324  0.373
2016 Pera V, Brooks DH, Niedre M. Multiplexed fluorescence tomography with spectral and temporal data: demixing with intrinsic regularization. Biomedical Optics Express. 7: 111-31. PMID 26819822 DOI: 10.1364/Boe.7.000111  0.425
2015 Mu Y, Niedre M. Fast single photon avalanche photodiode-based time-resolved diffuse optical tomography scanner. Biomedical Optics Express. 6: 3596-609. PMID 26417526 DOI: 10.1364/Boe.6.003596  0.639
2015 Pera V, Brooks DH, Niedre M. A sparse nonnegative demixing algorithm with intrinsic regularization for multiplexed fluorescence tomography Proceedings - International Symposium On Biomedical Imaging. 2015: 1044-1047. DOI: 10.1109/ISBI.2015.7164050  0.305
2014 Mu Y, Niedre M. A fast SPAD-based small animal imager for early-photon diffuse optical tomography. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2014: 2833-6. PMID 25570581 DOI: 10.1109/EMBC.2014.6944213  0.616
2014 Pera V, Brooks DH, Niedre M. On the use of the Cramér-Rao lower bound for diffuse optical imaging system design. Journal of Biomedical Optics. 19: 025002. PMID 24503635 DOI: 10.1117/1.Jbo.19.2.025002  0.385
2014 Markovic S, Kumar R, Belz J, Sridhar S, Niedre M. Fluorescence quantification of nanoparticle diffusion from smart brachytherapy spacers in vivo Proceedings of the Ieee Annual Northeast Bioengineering Conference, Nebec. 2014. DOI: 10.1109/NEBEC.2014.6972866  0.32
2013 Markovic S, Li B, Pera V, Sznaier M, Camps O, Niedre M. A computer vision approach to rare cell in vivo fluorescence flow cytometry. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 83: 1113-23. PMID 24273157 DOI: 10.1002/Cyto.A.22397  0.381
2013 Mu Y, Valim N, Niedre M. Evaluation of a fast single-photon avalanche photodiode for measurement of early transmitted photons through diffusive media. Optics Letters. 38: 2098-100. PMID 23938989 DOI: 10.1364/Ol.38.002098  0.766
2013 Pestana N, Mortensen LJ, Runnels JP, Vickers D, Murthy SK, Lin CP, Niedre M. Improved diffuse fluorescence flow cytometer prototype for high sensitivity detection of rare circulating cells in vivo. Journal of Biomedical Optics. 18: 077002. PMID 23831714 DOI: 10.1117/1.Jbo.18.7.077002  0.332
2013 Pera V, Zettergren E, Brooks DH, Niedre M. Maximum likelihood tomographic reconstruction of extremely sparse solutions in diffuse fluorescence flow cytometry. Optics Letters. 38: 2357-9. PMID 23811927 DOI: 10.1364/Ol.38.002357  0.418
2013 Valim N, Brock J, Leeser M, Niedre M. The effect of temporal impulse response on experimental reduction of photon scatter in time-resolved diffuse optical tomography. Physics in Medicine and Biology. 58: 335-49. PMID 23257349 DOI: 10.1088/0031-9155/58/2/335  0.776
2013 Kumar R, Belz J, Markovic S, Jadhav T, Nguyen P, Niedre M, DAmico A, Makrigiorgos M, Cormack R, Sridhar S. Abstract 1594: Sustained release of drug eluting nanoparticles from implantable devices for loco-regional chemoradiation therapy. Cancer Research. 73: 1594-1594. DOI: 10.1158/1538-7445.Am2013-1594  0.341
2013 Pestana N, Walsh D, Hatch A, Hahn P, Jaffe GJ, Murthy SK, Niedre M. A dedicated low-cost fluorescence microfluidic device reader for point-of-care ocular diagnostics Journal of Medical Devices, Transactions of the Asme. 7. DOI: 10.1115/1.4023995  0.335
2013 Mu Y, Valim N, Niedre M. Fast avalanche photodiode-based small animal time-resolved diffuse f2l0u13o trhee socpteicnal cseoc iety (osa) tomography imager Optical Molecular Probes, Imaging and Drug Delivery, Omp 2013.  0.747
2012 Dimarzio CA, Niedre M. Pre-clinical optical molecular imaging in the lung: technological challenges and future prospects. Journal of Thoracic Disease. 4: 556-7. PMID 23205277 DOI: 10.3978/J.Issn.2072-1439.2012.08.11  0.377
2012 Zettergren E, Swamy T, Runnels J, Lin CP, Niedre M. Tomographic sensing and localization of fluorescently labeled circulating cells in mice in vivo. Physics in Medicine and Biology. 57: 4627-41. PMID 22750660 DOI: 10.1088/0031-9155/57/14/4627  0.439
2012 Zettergren E, Vickers D, Runnels J, Murthy SK, Lin CP, Niedre M. Instrument for fluorescence sensing of circulating cells with diffuse light in mice in vivo. Journal of Biomedical Optics. 17: 037001. PMID 22502573 DOI: 10.1117/1.Jbo.17.3.037001  0.454
2012 Zettergren E, Runnels J, Lin CP, Niedre M. Small Animal Tomographic In Vivo Flow Cytometry with Diffuse Fluorescence Light Ieee Transactions On Biomedical Engineering. DOI: 10.1364/Biomed.2012.Btu2A.2  0.462
2012 Valim N, Niedre M. The effect of instrumentation on the experimental reduction of photon scatter in time-resolved diffuse fluorescence tomography Biomedical Optics, Biomed 2012. DOI: 10.1364/Biomed.2012.Bsu3A.67  0.764
2012 Valim N, Niedre M. Instrumentation considerations for measurement of early arriving photons in diffuse optical tomography Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8215. DOI: 10.1117/12.908774  0.777
2012 Zettergren E, Runnels J, Lin CP, Niedre M. Small animal tomographic In Vivo flow cytometry with diffuse fluorescent light Biomedical Optics, Biomed 2012.  0.37
2011 Zettergren E, Vickers D, Runnels J, Lin CP, Niedre MJ. Validation of a device for fluorescence sensing of rare circulating cells with diffusive light in an optical flow phantom model. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2011: 486-9. PMID 22254354 DOI: 10.1109/IEMBS.2011.6090071  0.336
2011 Li Z, Niedre M. Hybrid use of early and quasi-continuous wave photons in time-domain tomographic imaging for improved resolution and quantitative accuracy. Biomedical Optics Express. 2: 665-79. PMID 21412471 DOI: 10.1364/Boe.2.000665  0.528
2011 Zettergren E, Vickers D, Niedre M. Sensing and enumerating rare circulating cells with diffuse light Progress in Biomedical Optics and Imaging - Proceedings of Spie. 7902. DOI: 10.1117/12.875332  0.453
2010 Valim N, Brock J, Niedre M. Experimental measurement of time-dependent photon scatter for diffuse optical tomography. Journal of Biomedical Optics. 15: 065006. PMID 21198170 DOI: 10.1117/1.3523371  0.779
2010 Niedre M, Ntziachristos V. Comparison of fluorescence tomographic imaging in mice with early-arriving and quasi-continuous-wave photons. Optics Letters. 35: 369-71. PMID 20125724 DOI: 10.1364/Ol.35.000369  0.578
2009 Niedre M, Ntziachristos V. Complete angle small animal fluorescence imaging with early-arriving photons. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2009: 6331-4. PMID 19964155 DOI: 10.1109/IEMBS.2009.5333167  0.491
2008 Niedre MJ, de Kleine RH, Aikawa E, Kirsch DG, Weissleder R, Ntziachristos V. Early photon tomography allows fluorescence detection of lung carcinomas and disease progression in mice in vivo. Proceedings of the National Academy of Sciences of the United States of America. 105: 19126-31. PMID 19015534 DOI: 10.1073/Pnas.0804798105  0.356
2008 Haller J, Hyde D, Deliolanis N, De Kleine R, Niedre M, Ntziachristos V. Visualization of pulmonary inflammation using noninvasive fluorescence molecular imaging Journal of Applied Physiology. 104: 795-802. PMID 18202169 DOI: 10.1152/Japplphysiol.00959.2007  0.361
2007 Baeten J, Niedre M, Dunham J, Ntziachristos V. Development of fluorescent materials for Diffuse Fluorescence Tomography standards and phantoms. Optics Express. 15: 8681-94. PMID 19547203 DOI: 10.1364/Oe.15.008681  0.434
2007 Moriyama EH, Jarvi M, Niedre M, Mocanu JD, Moriyama Y, Buhong L, Lilge L, Wilson BC. In vitro influence of hypoxia on bioluminescence imaging in brain tumor cells Progress in Biomedical Optics and Imaging - Proceedings of Spie. 6449. DOI: 10.1117/12.696720  0.323
2006 Deliolanis N, Lasser T, Niedre M, Soubret A, Ntziachristos V. In-vivo lung cancer imaging in mice using 360 degrees free-space fluorescence molecular tomography. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 1: 2370-2. PMID 17946109 DOI: 10.1109/IEMBS.2006.260683  0.321
2006 Niedre MJ, Turner GM, Ntziachristos V. Time-resolved imaging of optical coefficients through murine chest cavities. Journal of Biomedical Optics. 11: 064017. PMID 17212540 DOI: 10.1117/1.2400702  0.425
2006 Niedre MJ, Turner GM, Ntziachristos V. Time-gated imaging through murine chest cavities Optics Infobase Conference Papers.  0.348
2006 Niedre MJ, Turner GM, Ntziachristos V. Complete-angle projection diffuse fluorescence molecular tomography with early photons Optics Infobase Conference Papers.  0.426
2002 Niedre M, Patterson MS, Wilson BC. Direct near-infrared luminescence detection of singlet oxygen generated by photodynamic therapy in cells in vitro and tissues in vivo. Photochemistry and Photobiology. 75: 382-91. PMID 12003128 DOI: 10.1562/0031-8655(2002)075<0382:Dnildo>2.0.Co;2  0.346
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