| Year |
Citation |
Score |
| 2019 |
Gilbert KB, Holcomb EE, Allscheid RL, Carrington JC. Hiding in plain sight: New virus genomes discovered via a systematic analysis of fungal public transcriptomes. Plos One. 14: e0219207. PMID 31339899 DOI: 10.1371/Journal.Pone.0219207 |
0.498 |
|
| 2019 |
Hoyer JS, Pruneda-Paz JL, Breton G, Hassert MA, Holcomb EE, Fowler H, Bauer KM, Mreen J, Kay SA, Carrington JC. Functional dissection of the promoter. Plant Direct. 3: e00102. PMID 31245750 DOI: 10.1002/pld3.102 |
0.359 |
|
| 2019 |
Zheng X, Fahlgren N, Abbasi A, Berry JC, Carrington JC. Antiviral ARGONAUTEs Against Turnip Crinkle Virus Revealed by Image-based Trait Analysis. Plant Physiology. PMID 31043494 DOI: 10.1104/Pp.19.00121 |
0.739 |
|
| 2018 |
Gomez MA, Lin ZD, Moll T, Chauhan RD, Hayden L, Renninger K, Beyene G, Taylor NJ, Carrington J, Staskawicz B, Bart R. Simultaneous CRISPR/Cas9-mediated editing of cassava eIF4E isoforms nCBP-1 and nCBP-2 reduces cassava brown streak disease symptom severity and incidence. Plant Biotechnology Journal. PMID 30019807 DOI: 10.1111/Pbi.12987 |
0.357 |
|
| 2018 |
Tovar JC, Hoyer JS, Lin A, Tielking A, Callen ST, Elizabeth Castillo S, Miller M, Tessman M, Fahlgren N, Carrington JC, Nusinow DA, Gehan MA. Raspberry Pi-powered imaging for plant phenotyping. Applications in Plant Sciences. 6: e1031. PMID 29732261 DOI: 10.1002/Aps3.1031 |
0.638 |
|
| 2016 |
Kuria P, Ilyas M, Ateka E, Miano D, Onguso J, Carrington JC, Taylor NJ. Differential response of cassava genotypes to infection by cassava mosaic geminiviruses. Virus Research. PMID 27693919 DOI: 10.1016/J.Virusres.2016.09.022 |
0.327 |
|
| 2016 |
Campo S, Gilbert KB, Carrington JC. Small RNA-Based Antiviral Defense in the Phytopathogenic Fungus Colletotrichum higginsianum. Plos Pathogens. 12: e1005640. PMID 27253323 DOI: 10.1371/Journal.Ppat.1005640 |
0.554 |
|
| 2016 |
Carbonell A, Carrington JC, Daròs JA. Fast-forward generation of effective artificial small RNAs for enhanced antiviral defense in plants. Rna & Disease (Houston, Tex.). 3. PMID 26925463 DOI: 10.14800/Rd.1130 |
0.54 |
|
| 2016 |
Beyene G, Chauhan RD, Wagaba H, Moll T, Alicai T, Miano D, Carrington JC, Taylor NJ. Loss of CMD2-mediated resistance to cassava mosaic disease in plants regenerated through somatic embryogenesis. Molecular Plant Pathology. 17: 1095-110. PMID 26662210 DOI: 10.1111/Mpp.12353 |
0.316 |
|
| 2016 |
Fahlgren N, Hill ST, Carrington JC, Carbonell A. P-SAMS: a web site for plant artificial microRNA and synthetic trans-acting small interfering RNA design. Bioinformatics (Oxford, England). 32: 157-8. PMID 26382195 DOI: 10.1093/Bioinformatics/Btv534 |
0.771 |
|
| 2015 |
Wang H, Beyene G, Zhai J, Feng S, Fahlgren N, Taylor NJ, Bart R, Carrington JC, Jacobsen SE, Ausin I. CG gene body DNA methylation changes and evolution of duplicated genes in cassava. Proceedings of the National Academy of Sciences of the United States of America. 112: 13729-34. PMID 26483493 DOI: 10.1073/Pnas.1519067112 |
0.632 |
|
| 2015 |
Carbonell A, Carrington JC. Antiviral roles of plant ARGONAUTES. Current Opinion in Plant Biology. 27: 111-7. PMID 26190744 DOI: 10.1016/J.Pbi.2015.06.013 |
0.586 |
|
| 2015 |
Fahlgren N, Feldman M, Gehan MA, Wilson MS, Shyu C, Bryant DW, Hill ST, McEntee CJ, Warnasooriya SN, Kumar I, Ficor T, Turnipseed S, Gilbert KB, Brutnell TP, Carrington JC, et al. A versatile phenotyping system and analytics platform reveals diverse temporal responses to water availability in Setaria. Molecular Plant. PMID 26099924 DOI: 10.1016/J.Molp.2015.06.005 |
0.641 |
|
| 2015 |
Carbonell A, Fahlgren N, Mitchell S, Cox KL, Reilly KC, Mockler TC, Carrington JC. Highly specific gene silencing in a monocot species by artificial microRNAs derived from chimeric miRNA precursors. The Plant Journal : For Cell and Molecular Biology. 82: 1061-1075. PMID 25809382 DOI: 10.1111/Tpj.12835 |
0.741 |
|
| 2015 |
Garcia-Ruiz H, Carbonell A, Hoyer JS, Fahlgren N, Gilbert KB, Takeda A, Giampetruzzi A, Garcia Ruiz MT, McGinn MG, Lowery N, Martinez Baladejo MT, Carrington JC. Roles and programming of Arabidopsis ARGONAUTE proteins during Turnip mosaic virus infection. Plos Pathogens. 11: e1004755. PMID 25806948 DOI: 10.1371/Journal.Ppat.1004755 |
0.786 |
|
| 2015 |
Garcia-Ruiz H, Takeda A, Chapman EJ, Sullivan CM, Fahlgren N, Brempelis KJ, Carrington JC. Correction. Arabidopsis RNA-dependent RNA polymerases and dicer-like proteins in antiviral defense and small interfering RNA biogenesis during Turnip mosaic virus infection. The Plant Cell. 27: 944-5. PMID 25783032 DOI: 10.1105/tpc.15.00204 |
0.83 |
|
| 2015 |
Fahlgren N, Hill ST, Carrington JC, Carbonell A. P-SAMS: A web site for plant artificial microRNA and synthetic trans-acting small interfering RNA design Bioinformatics. 32: 157-158. DOI: 10.1093/bioinformatics/btv534 |
0.738 |
|
| 2014 |
Gilbert KB, Fahlgren N, Kasschau KD, Chapman EJ, Carrington JC, Carbonell A. Preparation of Multiplexed Small RNA Libraries From Plants. Bio-Protocol. 4. PMID 26661568 DOI: 10.21769/BIOPROTOC.1275 |
0.828 |
|
| 2014 |
Zhang X, Niu D, Carbonell A, Wang A, Lee A, Tun V, Wang Z, Carrington JC, Chang CE, Jin H. ARGONAUTE PIWI domain and microRNA duplex structure regulate small RNA sorting in Arabidopsis. Nature Communications. 5: 5468. PMID 25406978 DOI: 10.1038/Ncomms6468 |
0.547 |
|
| 2014 |
Minoia S, Carbonell A, Di Serio F, Gisel A, Carrington JC, Navarro B, Flores R. Specific argonautes selectively bind small RNAs derived from potato spindle tuber viroid and attenuate viroid accumulation in vivo. Journal of Virology. 88: 11933-45. PMID 25100851 DOI: 10.1128/Jvi.01404-14 |
0.61 |
|
| 2014 |
Carbonell A, Takeda A, Fahlgren N, Johnson SC, Cuperus JT, Carrington JC. New generation of artificial MicroRNA and synthetic trans-acting small interfering RNA vectors for efficient gene silencing in Arabidopsis. Plant Physiology. 165: 15-29. PMID 24647477 DOI: 10.1104/Pp.113.234989 |
0.837 |
|
| 2013 |
Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ. Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon. Genome Biology. 14: R145. PMID 24367943 DOI: 10.1186/Gb-2013-14-12-R145 |
0.786 |
|
| 2013 |
Fahlgren N, Bollmann SR, Kasschau KD, Cuperus JT, Press CM, Sullivan CM, Chapman EJ, Hoyer JS, Gilbert KB, Grünwald NJ, Carrington JC. Phytophthora have distinct endogenous small RNA populations that include short interfering and microRNAs. Plos One. 8: e77181. PMID 24204767 DOI: 10.1371/Journal.Pone.0077181 |
0.848 |
|
| 2012 |
Carbonell A, Fahlgren N, Garcia-Ruiz H, Gilbert KB, Montgomery TA, Nguyen T, Cuperus JT, Carrington JC. Functional analysis of three Arabidopsis argonautes using slicer-defective mutants Plant Cell. 24: 3613-3629. PMID 23023169 DOI: 10.1105/Tpc.112.099945 |
0.857 |
|
| 2012 |
Zhang C, Montgomery TA, Fischer SE, Garcia SM, Riedel CG, Fahlgren N, Sullivan CM, Carrington JC, Ruvkun G. The Caenorhabditis elegans RDE-10/RDE-11 complex regulates RNAi by promoting secondary siRNA amplification. Current Biology : Cb. 22: 881-90. PMID 22542102 DOI: 10.1016/J.Cub.2012.04.011 |
0.843 |
|
| 2012 |
Kurth EG, Peremyslov VV, Prokhnevsky AI, Kasschau KD, Miller M, Carrington JC, Dolja VV. Virus-derived gene expression and RNA interference vector for grapevine. Journal of Virology. 86: 6002-9. PMID 22438553 DOI: 10.1128/Jvi.00436-12 |
0.36 |
|
| 2011 |
Fischer SE, Montgomery TA, Zhang C, Fahlgren N, Breen PC, Hwang A, Sullivan CM, Carrington JC, Ruvkun G. The ERI-6/7 helicase acts at the first stage of an siRNA amplification pathway that targets recent gene duplications. Plos Genetics. 7: e1002369. PMID 22102828 DOI: 10.1371/Journal.Pgen.1002369 |
0.844 |
|
| 2011 |
Cumbie JS, Kimbrel JA, Di Y, Schafer DW, Wilhelm LJ, Fox SE, Sullivan CM, Curzon AD, Carrington JC, Mockler TC, Chang JH. GENE-counter: a computational pipeline for the analysis of RNA-Seq data for gene expression differences. Plos One. 6: e25279. PMID 21998647 DOI: 10.1371/Journal.Pone.0025279 |
0.437 |
|
| 2011 |
Hu TT, Pattyn P, Bakker EG, Cao J, Cheng JF, Clark RM, Fahlgren N, Fawcett JA, Grimwood J, Gundlach H, Haberer G, Hollister JD, Ossowski S, Ottilar RP, Salamov AA, ... ... Carrington JC, et al. The Arabidopsis lyrata genome sequence and the basis of rapid genome size change. Nature Genetics. 43: 476-81. PMID 21478890 DOI: 10.1038/Ng.807 |
0.671 |
|
| 2011 |
Cuperus JT, Fahlgren N, Carrington JC. Evolution and functional diversification of MIRNA genes. The Plant Cell. 23: 431-42. PMID 21317375 DOI: 10.1105/Tpc.110.082784 |
0.812 |
|
| 2011 |
Zhang C, Montgomery TA, Gabel HW, Fischer SE, Phillips CM, Fahlgren N, Sullivan CM, Carrington JC, Ruvkun G. mut-16 and other mutator class genes modulate 22G and 26G siRNA pathways in Caenorhabditis elegans. Proceedings of the National Academy of Sciences of the United States of America. 108: 1201-8. PMID 21245313 DOI: 10.1073/Pnas.1018695108 |
0.827 |
|
| 2011 |
Greenberg MV, Ausin I, Chan SW, Cokus SJ, Cuperus JT, Feng S, Law JA, Chu C, Pellegrini M, Carrington JC, Jacobsen SE. Identification of genes required for de novo DNA methylation in Arabidopsis. Epigenetics. 6: 344-54. PMID 21150311 DOI: 10.4161/Epi.6.3.14242 |
0.681 |
|
| 2010 |
Cuperus JT, Carbonell A, Fahlgren N, Garcia-Ruiz H, Burke RT, Takeda A, Sullivan CM, Gilbert SD, Montgomery TA, Carrington JC. Unique functionality of 22-nt miRNAs in triggering RDR6-dependent siRNA biogenesis from target transcripts in Arabidopsis Nature Structural and Molecular Biology. 17: 997-1003. PMID 20562854 DOI: 10.1038/Nsmb.1866 |
0.844 |
|
| 2010 |
Dunoyer P, Schott G, Himber C, Meyer D, Takeda A, Carrington JC, Voinnet O. Small RNA duplexes function as mobile silencing signals between plant cells. Science (New York, N.Y.). 328: 912-6. PMID 20413458 DOI: 10.1126/Science.1185880 |
0.434 |
|
| 2010 |
Fahlgren N, Jogdeo S, Kasschau KD, Sullivan CM, Chapman EJ, Laubinger S, Smith LM, Dasenko M, Givan SA, Weigel D, Carrington JC. MicroRNA gene evolution in Arabidopsis lyrata and Arabidopsis thaliana. The Plant Cell. 22: 1074-89. PMID 20407027 DOI: 10.1105/Tpc.110.073999 |
0.824 |
|
| 2010 |
Garcia-Ruiz H, Takeda A, Chapman EJ, Sullivan CM, Fahlgren N, Brempelis KJ, Carrington JC. Arabidopsis RNA-dependent RNA polymerases and dicer-like proteins in antiviral defense and small interfering RNA biogenesis during Turnip mosaic virus infection Plant Cell. 22: 481-496. PMID 20190077 DOI: 10.1105/Tpc.109.073056 |
0.842 |
|
| 2010 |
Vogel JP, Garvin DF, Mockler TC, Schmutz J, Rokhsar D, Bevan MW, Barry K, Lucas S, Harmon-Smith M, Lail K, Tice H, Grimwood J, McKenzie N, Huo N, Gu YQ, ... ... Carrington JC, et al. Genome sequencing and analysis of the model grass Brachypodium distachyon Nature. 463: 763-768. PMID 20148030 DOI: 10.1038/Nature08747 |
0.759 |
|
| 2010 |
Lee H, Yoo SJ, Lee JH, Kim W, Yoo SK, Fitzgerald H, Carrington JC, Ahn JH. Genetic framework for flowering-time regulation by ambient temperature-responsive miRNAs in Arabidopsis. Nucleic Acids Research. 38: 3081-93. PMID 20110261 DOI: 10.1093/Nar/Gkp1240 |
0.368 |
|
| 2010 |
Cuperus JT, Montgomery TA, Fahlgren N, Burke RT, Townsend T, Sullivan CM, Carrington JC. Identification of MIR390a precursor processing-defective mutants in Arabidopsis by direct genome sequencing. Proceedings of the National Academy of Sciences of the United States of America. 107: 466-71. PMID 20018656 DOI: 10.1073/Pnas.0913203107 |
0.805 |
|
| 2010 |
Fahlgren N, Carrington JC. miRNA Target Prediction in Plants. Methods in Molecular Biology (Clifton, N.J.). 592: 51-7. PMID 19802588 DOI: 10.1007/978-1-60327-005-2_4 |
0.732 |
|
| 2009 |
Klevebring D, Street NR, Fahlgren N, Kasschau KD, Carrington JC, Lundeberg J, Jansson S. Genome-wide profiling of populus small RNAs. Bmc Genomics. 10: 620. PMID 20021695 DOI: 10.1186/1471-2164-10-620 |
0.774 |
|
| 2009 |
Ha M, Lu J, Tian L, Ramachandran V, Kasschau KD, Chapman EJ, Carrington JC, Chen X, Wang XJ, Chen ZJ. Small RNAs serve as a genetic buffer against genomic shock in Arabidopsis interspecific hybrids and allopolyploids. Proceedings of the National Academy of Sciences of the United States of America. 106: 17835-40. PMID 19805056 DOI: 10.1073/Pnas.0907003106 |
0.765 |
|
| 2009 |
Gu W, Shirayama M, Conte D, Vasale J, Batista PJ, Claycomb JM, Moresco JJ, Youngman EM, Keys J, Stoltz MJ, Chen CC, Chaves DA, Duan S, Kasschau KD, Fahlgren N, ... ... Carrington JC, et al. Distinct argonaute-mediated 22G-RNA pathways direct genome surveillance in the C. elegans germline. Molecular Cell. 36: 231-44. PMID 19800275 DOI: 10.1016/J.Molcel.2009.09.020 |
0.768 |
|
| 2009 |
Haas BJ, Kamoun S, Zody MC, Jiang RH, Handsaker RE, Cano LM, Grabherr M, Kodira CD, Raffaele S, Torto-Alalibo T, Bozkurt TO, Ah-Fong AM, Alvarado L, Anderson VL, Armstrong MR, ... ... Carrington JC, et al. Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature. 461: 393-8. PMID 19741609 DOI: 10.1038/Nature08358 |
0.672 |
|
| 2009 |
Rubio-Somoza I, Cuperus JT, Weigel D, Carrington JC. Regulation and functional specialization of small RNA-target nodes during plant development. Current Opinion in Plant Biology. 12: 622-7. PMID 19699140 DOI: 10.1016/J.Pbi.2009.07.003 |
0.803 |
|
| 2009 |
Fahlgren N, Sullivan CM, Kasschau KD, Chapman EJ, Cumbie JS, Montgomery TA, Gilbert SD, Dasenko M, Backman TW, Givan SA, Carrington JC. Computational and analytical framework for small RNA profiling by high-throughput sequencing. Rna (New York, N.Y.). 15: 992-1002. PMID 19307293 DOI: 10.1261/Rna.1473809 |
0.826 |
|
| 2009 |
Chitwood DH, Nogueira FT, Howell MD, Montgomery TA, Carrington JC, Timmermans MC. Pattern formation via small RNA mobility. Genes & Development. 23: 549-54. PMID 19270155 DOI: 10.1101/Gad.1770009 |
0.751 |
|
| 2008 |
Meyers BC, Axtell MJ, Bartel B, Bartel DP, Baulcombe D, Bowman JL, Cao X, Carrington JC, Chen X, Green PJ, Griffiths-Jones S, Jacobsen SE, Mallory AC, Martienssen RA, Poethig RS, et al. Criteria for annotation of plant MicroRNAs. The Plant Cell. 20: 3186-90. PMID 19074682 DOI: 10.1105/Tpc.108.064311 |
0.621 |
|
| 2008 |
Montgomery TA, Yoo SJ, Fahlgren N, Gilbert SD, Howell MD, Sullivan CM, Alexander A, Nguyen G, Allen E, Ahn JH, Carrington JC. AGO1-miR173 complex initiates phased siRNA formation in plants. Proceedings of the National Academy of Sciences of the United States of America. 105: 20055-62. PMID 19066226 DOI: 10.1073/Pnas.0810241105 |
0.824 |
|
| 2008 |
Preuss SB, Costa-Nunes P, Tucker S, Pontes O, Lawrence RJ, Mosher R, Kasschau KD, Carrington JC, Baulcombe DC, Viegas W, Pikaard CS. Multimegabase silencing in nucleolar dominance involves siRNA-directed DNA methylation and specific methylcytosine-binding proteins. Molecular Cell. 32: 673-84. PMID 19061642 DOI: 10.1016/J.Molcel.2008.11.009 |
0.378 |
|
| 2008 |
Batista PJ, Ruby JG, Claycomb JM, Chiang R, Fahlgren N, Kasschau KD, Chaves DA, Gu W, Vasale JJ, Duan S, Conte D, Luo S, Schroth GP, Carrington JC, Bartel DP, et al. PRG-1 and 21U-RNAs interact to form the piRNA complex required for fertility in C. elegans. Molecular Cell. 31: 67-78. PMID 18571452 DOI: 10.1016/J.Molcel.2008.06.002 |
0.755 |
|
| 2008 |
Montgomery TA, Carrington JC. Splicing and dicing with a SERRATEd edge. Proceedings of the National Academy of Sciences of the United States of America. 105: 8489-90. PMID 18559848 DOI: 10.1073/Pnas.0804356105 |
0.722 |
|
| 2008 |
Montgomery TA, Howell MD, Cuperus JT, Li D, Hansen JE, Alexander AL, Chapman EJ, Fahlgren N, Allen E, Carrington JC. Specificity of ARGONAUTE7-miR390 interaction and dual functionality in TAS3 trans-acting siRNA formation. Cell. 133: 128-41. PMID 18342362 DOI: 10.1016/J.Cell.2008.02.033 |
0.817 |
|
| 2008 |
Backman TW, Sullivan CM, Cumbie JS, Miller ZA, Chapman EJ, Fahlgren N, Givan SA, Carrington JC, Kasschau KD. Update of ASRP: the Arabidopsis Small RNA Project database. Nucleic Acids Research. 36: D982-5. PMID 17999994 DOI: 10.1093/Nar/Gkm997 |
0.822 |
|
| 2008 |
Chitwood DH, Nogueira FT, Howell MD, Montogmery TA, Carrington JC, Timmermans MC. Pattern formation in leaves via small RNA mobility Developmental Biology. 319: 587-588. DOI: 10.1016/j.ydbio.2008.05.479 |
0.39 |
|
| 2007 |
Chapman EJ, Carrington JC. Specialization and evolution of endogenous small RNA pathways. Nature Reviews. Genetics. 8: 884-96. PMID 17943195 DOI: 10.1038/Nrg2179 |
0.789 |
|
| 2007 |
Liu PP, Montgomery TA, Fahlgren N, Kasschau KD, Nonogaki H, Carrington JC. Repression of AUXIN RESPONSE FACTOR10 by microRNA160 is critical for seed germination and post-germination stages. The Plant Journal : For Cell and Molecular Biology. 52: 133-46. PMID 17672844 DOI: 10.1111/J.1365-313X.2007.03218.X |
0.784 |
|
| 2007 |
Henz SR, Cumbie JS, Kasschau KD, Lohmann JU, Carrington JC, Weigel D, Schmid M. Distinct expression patterns of natural antisense transcripts in Arabidopsis. Plant Physiology. 144: 1247-55. PMID 17496106 DOI: 10.1104/Pp.107.100396 |
0.366 |
|
| 2007 |
Howell MD, Fahlgren N, Chapman EJ, Cumbie JS, Sullivan CM, Givan SA, Kasschau KD, Carrington JC. Genome-wide analysis of the RNA-DEPENDENT RNA POLYMERASE6/DICER-LIKE4 pathway in Arabidopsis reveals dependency on miRNA- and tasiRNA-directed targeting. The Plant Cell. 19: 926-42. PMID 17400893 DOI: 10.1105/Tpc.107.050062 |
0.868 |
|
| 2007 |
Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC. High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes. Plos One. 2: e219. PMID 17299599 DOI: 10.1371/Journal.Pone.0000219 |
0.821 |
|
| 2007 |
Kasschau KD, Fahlgren N, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Carrington JC. Genome-wide profiling and analysis of Arabidopsis siRNAs. Plos Biology. 5: e57. PMID 17298187 DOI: 10.1371/Journal.Pbio.0050057 |
0.851 |
|
| 2006 |
Deleris A, Gallego-Bartolome J, Bao J, Kasschau KD, Carrington JC, Voinnet O. Hierarchical action and inhibition of plant Dicer-like proteins in antiviral defense. Science (New York, N.Y.). 313: 68-71. PMID 16741077 DOI: 10.1126/Science.1128214 |
0.466 |
|
| 2006 |
Lakatos L, Csorba T, Pantaleo V, Chapman EJ, Carrington JC, Liu YP, Dolja VV, Calvino LF, López-Moya JJ, Burgyán J. Small RNA binding is a common strategy to suppress RNA silencing by several viral suppressors. The Embo Journal. 25: 2768-80. PMID 16724105 DOI: 10.1038/Sj.Emboj.7601164 |
0.77 |
|
| 2006 |
Fahlgren N, Montgomery TA, Howell MD, Allen E, Dvorak SK, Alexander AL, Carrington JC. Regulation of AUXIN RESPONSE FACTOR3 by TAS3 ta-siRNA affects developmental timing and patterning in Arabidopsis. Current Biology : Cb. 16: 939-44. PMID 16682356 DOI: 10.1016/J.Cub.2006.03.065 |
0.83 |
|
| 2006 |
Yu B, Chapman EJ, Yang Z, Carrington JC, Chen X. Transgenically expressed viral RNA silencing suppressors interfere with microRNA methylation in Arabidopsis. Febs Letters. 580: 3117-20. PMID 16678167 DOI: 10.1016/J.Febslet.2006.04.063 |
0.721 |
|
| 2006 |
Chiba M, Reed JC, Prokhnevsky AI, Chapman EJ, Mawassi M, Koonin EV, Carrington JC, Dolja VV. Diverse suppressors of RNA silencing enhance agroinfection by a viral replicon. Virology. 346: 7-14. PMID 16300814 DOI: 10.1016/J.Virol.2005.09.068 |
0.738 |
|
| 2005 |
Grey F, Antoniewicz A, Allen E, Saugstad J, McShea A, Carrington JC, Nelson J. Identification and characterization of human cytomegalovirus-encoded microRNAs. Journal of Virology. 79: 12095-9. PMID 16140786 DOI: 10.1128/JVI.79.18.12095-12099.2005 |
0.393 |
|
| 2005 |
Xie Z, Allen E, Wilken A, Carrington JC. DICER-LIKE 4 functions in trans-acting small interfering RNA biogenesis and vegetative phase change in Arabidopsis thaliana. Proceedings of the National Academy of Sciences of the United States of America. 102: 12984-9. PMID 16129836 DOI: 10.1073/Pnas.0506426102 |
0.51 |
|
| 2005 |
Xie Z, Allen E, Fahlgren N, Calamar A, Givan SA, Carrington JC. Expression of Arabidopsis MIRNA genes. Plant Physiology. 138: 2145-54. PMID 16040653 DOI: 10.1104/Pp.105.062943 |
0.759 |
|
| 2005 |
Carrington JC. Small RNAs and Arabidopsis. A fast forward look. Plant Physiology. 138: 565-6. PMID 15955917 DOI: 10.1104/pp.104.900156 |
0.46 |
|
| 2005 |
Allen E, Xie Z, Gustafson AM, Carrington JC. microRNA-directed phasing during trans-acting siRNA biogenesis in plants. Cell. 121: 207-21. PMID 15851028 DOI: 10.1016/J.Cell.2005.04.004 |
0.574 |
|
| 2005 |
Gustafson AM, Allen E, Givan S, Smith D, Carrington JC, Kasschau KD. ASRP: the Arabidopsis Small RNA Project Database. Nucleic Acids Research. 33: D637-40. PMID 15608278 DOI: 10.1093/Nar/Gki127 |
0.633 |
|
| 2004 |
Allen E, Xie Z, Gustafson AM, Sung GH, Spatafora JW, Carrington JC. Evolution of microRNA genes by inverted duplication of target gene sequences in Arabidopsis thaliana. Nature Genetics. 36: 1282-90. PMID 15565108 DOI: 10.1038/Ng1478 |
0.436 |
|
| 2004 |
Lippman Z, Gendrel AV, Black M, Vaughn MW, Dedhia N, McCombie WR, Lavine K, Mittal V, May B, Kasschau KD, Carrington JC, Doerge RW, Colot V, Martienssen R. Role of transposable elements in heterochromatin and epigenetic control. Nature. 430: 471-6. PMID 15269773 DOI: 10.1038/Nature02651 |
0.364 |
|
| 2004 |
Zilberman D, Cao X, Johansen LK, Xie Z, Carrington JC, Jacobsen SE. Role of Arabidopsis ARGONAUTE4 in RNA-directed DNA methylation triggered by inverted repeats. Current Biology : Cb. 14: 1214-20. PMID 15242620 DOI: 10.1016/J.Cub.2004.06.055 |
0.416 |
|
| 2004 |
Chapman EJ, Prokhnevsky AI, Gopinath K, Dolja VV, Carrington JC. Viral RNA silencing suppressors inhibit the microRNA pathway at an intermediate step. Genes & Development. 18: 1179-86. PMID 15131083 DOI: 10.1101/Gad.1201204 |
0.787 |
|
| 2004 |
Xie Z, Johansen LK, Gustafson AM, Kasschau KD, Lellis AD, Zilberman D, Jacobsen SE, Carrington JC. Genetic and functional diversification of small RNA pathways in plants. Plos Biology. 2: E104. PMID 15024409 DOI: 10.1371/Journal.Pbio.0020104 |
0.652 |
|
| 2003 |
Palatnik JF, Allen E, Wu X, Schommer C, Schwab R, Carrington JC, Weigel D. Control of leaf morphogenesis by microRNAs. Nature. 425: 257-63. PMID 12931144 DOI: 10.1038/Nature01958 |
0.543 |
|
| 2003 |
Carrington JC, Ambros V. Role of microRNAs in plant and animal development. Science (New York, N.Y.). 301: 336-8. PMID 12869753 DOI: 10.1126/Science.1085242 |
0.636 |
|
| 2003 |
Xie Z, Kasschau KD, Carrington JC. Negative feedback regulation of Dicer-Like1 in Arabidopsis by microRNA-guided mRNA degradation. Current Biology : Cb. 13: 784-9. PMID 12725739 DOI: 10.1016/S0960-9822(03)00281-1 |
0.526 |
|
| 2003 |
Reed JC, Kasschau KD, Prokhnevsky AI, Gopinath K, Pogue GP, Carrington JC, Dolja VV. Suppressor of RNA silencing encoded by Beet yellows virus. Virology. 306: 203-9. PMID 12642093 DOI: 10.1016/S0042-6822(02)00051-X |
0.406 |
|
| 2003 |
Ambros V, Bartel B, Bartel DP, Burge CB, Carrington JC, Chen X, Dreyfuss G, Eddy SR, Griffiths-Jones S, Marshall M, Matzke M, Ruvkun G, Tuschl T. A uniform system for microRNA annotation. Rna (New York, N.Y.). 9: 277-9. PMID 12592000 DOI: 10.1261/Rna.2183803 |
0.554 |
|
| 2003 |
Kasschau KD, Xie Z, Allen E, Llave C, Chapman EJ, Krizan KA, Carrington JC. P1/HC-Pro, a viral suppressor of RNA silencing, interferes with Arabidopsis development and miRNA unction. Developmental Cell. 4: 205-17. PMID 12586064 DOI: 10.1016/S1534-5807(03)00025-X |
0.801 |
|
| 2002 |
Llave C, Xie Z, Kasschau KD, Carrington JC. Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA. Science (New York, N.Y.). 297: 2053-6. PMID 12242443 DOI: 10.1126/Science.1076311 |
0.585 |
|
| 2002 |
Llave C, Kasschau KD, Rector MA, Carrington JC. Endogenous and silencing-associated small RNAs in plants. The Plant Cell. 14: 1605-19. PMID 12119378 DOI: 10.1105/Tpc.003210 |
0.585 |
|
| 2001 |
Johansen LK, Carrington JC. Silencing on the spot. Induction and suppression of RNA silencing in the Agrobacterium-mediated transient expression system Plant Physiology. 126: 930-938. PMID 11457942 DOI: 10.1104/pp.126.3.930 |
0.475 |
|
| 2001 |
Carrington JC, Kasschau KD, Johansen LK. Activation and suppression of RNA silencing by plant viruses Virology. 281: 1-5. PMID 11222089 DOI: 10.1006/viro.2000.0812 |
0.435 |
|
| 2000 |
Carrington JC. Moving targets Nature. 408: 150-151. PMID 11089955 DOI: 10.1038/35041662 |
0.311 |
|
| 2000 |
Llave C, Kasschau KD, Carrington JC. Virus-encoded suppressor of posttranscriptional gene silencing targets a maintenance step in the silencing pathway Proceedings of the National Academy of Sciences of the United States of America. 97: 13401-13406. PMID 11078509 DOI: 10.1073/pnas.230334397 |
0.442 |
|
| 1998 |
Kasschau KD, Carrington JC. A counterdefensive strategy of plant viruses: Suppression of posttranscriptional gene silencing Cell. 95: 461-470. PMID 9827799 DOI: 10.1016/S0092-8674(00)81614-1 |
0.466 |
|
| 1997 |
Daròs JA, Carrington JC. RNA binding activity of NIa proteinase of tobacco etch potyvirus Virology. 237: 327-336. PMID 9356344 DOI: 10.1006/viro.1997.8802 |
0.431 |
|
| 1997 |
Schaad MC, Jensen PE, Carrington JC. Formation of plant RNA virus replication complexes on membranes: Role of an endoplasmic reticulum-targeted viral protein Embo Journal. 16: 4049-4059. PMID 9233814 DOI: 10.1093/emboj/16.13.4049 |
0.318 |
|
| 1997 |
Pruss G, Ge X, Shi XM, Carrington JC, Vance VB. Plant viral synergism: The potyviral genome encodes a broad-range pathogenicity enhancer that transactivates replication of heterologous viruses Plant Cell. 9: 859-868. PMID 9212462 DOI: 10.1105/tpc.9.6.859 |
0.322 |
|
| 1997 |
Li XH, Valdez P, Olvera RE, Carrington JC. Functions of the tobacco etch virus RNA polymerase (NIb): subcellular transport and protein-protein interaction with VPg/proteinase (NIa). Journal of Virology. 71: 1598-607. PMID 8995687 |
0.301 |
|
| 1995 |
Bowman Vance V, Berger PH, Carrington JC, Hunt AG, Ming Shi X. 5′ Proximal potyviral sequences mediate potato virus X/potyviral synergistic disease in transgenic tobacco Virology. 206: 583-590. PMID 7831814 DOI: 10.1016/S0042-6822(95)80075-1 |
0.323 |
|
| 1993 |
Li XH, Carrington JC. Nuclear transport of tobacco etch potyviral RNA-dependent RNA polymerase is highly sensitive to sequence alterations Virology. 193: 951-958. PMID 8460496 DOI: 10.1006/viro.1993.1204 |
0.378 |
|
| 1992 |
Rubino L, Carrington JC, Russo M. Biologically active cymbidium ringspot virus satellite RNA in transgenic plants suppresses accumulation of DI RNA Virology. 188: 429-437. PMID 1374981 DOI: 10.1016/0042-6822(92)90496-C |
0.429 |
|
| 1991 |
Koonin EV, Choi GH, Nuss DL, Shapira R, Carrington JC. Evidence for common ancestry of a chestnut blight hypovirulence-associated double-stranded RNA and a group of positive-strand RNA plant viruses Proceedings of the National Academy of Sciences of the United States of America. 88: 10647-10651. PMID 1961731 DOI: 10.1073/Pnas.88.23.10647 |
0.453 |
|
| 1990 |
Carrington JC, Freed DD. Cap-independent enhancement of translation by a plant potyvirus 5' nontranslated region Journal of Virology. 64: 1590-1597. PMID 2319646 |
0.367 |
|
| 1989 |
Carrington JC, Heaton LA, Zuidema D, Hillman BI, Morris TJ. The genome structure of turnip crinkle virus. Virology. 170: 219-26. PMID 2718381 DOI: 10.1016/0042-6822(89)90369-3 |
0.347 |
|
| 1989 |
Heaton LA, Carrington JC, Morris TJ. Turnip crinkle virus infection from RNA synthesized in vitro. Virology. 170: 214-8. PMID 2718380 DOI: 10.1016/0042-6822(89)90368-1 |
0.443 |
|
| 1989 |
Carrington JC, Cary SM, Parks TD, Dougherty WG. A second proteinase encoded by a plant potyvirus genome. The Embo Journal. 8: 365-70. PMID 2656254 |
0.331 |
|
| 1988 |
Russo M, Burgyan J, Carrington JC, Hillman BI, Morris TJ. Complementary DNA Cloning and Characterization of Cymbidium Ringspot Virus RNA Journal of General Virology. 69: 401-406. DOI: 10.1099/0022-1317-69-2-401 |
0.451 |
|
| 1987 |
Hillman BI, Carrington JC, Morris TJ. A defective interfering RNA that contains a mosaic of a plant virus genome Cell. 51: 427-433. PMID 3664641 DOI: 10.1016/0092-8674(87)90638-6 |
0.45 |
|
| 1986 |
Carrington JC, Morris TJ. High resolution mapping of carnation mottle virus-associated RNAs Virology. 150: 196-206. DOI: 10.1016/0042-6822(86)90279-5 |
0.457 |
|
| 1985 |
Guilley H, Carrington JC, Balàzs E, Jonard G, Richards K, Morris TJ. Nucleotide sequence and genome organization of carnation mottle virus RNA Nucleic Acids Research. 13: 6663-6677. PMID 3840587 DOI: 10.1093/nar/13.18.6663 |
0.39 |
|
| 1985 |
Carrington JC, Morris TJ. Characterization of the cell-free translation products of carnation mottle virus genomic and subgenomic RNAs Virology. 144: 1-10. DOI: 10.1016/0042-6822(85)90299-5 |
0.379 |
|
| 1984 |
Carrington JC, Morris TJ. Complementary DNA Cloning and analysis of carnation mottle virus RNA Virology. 139: 22-31. DOI: 10.1016/0042-6822(84)90326-X |
0.343 |
|
| 1983 |
Garger SJ, Turpen T, Carrington JC, Morris TJ, Jordan RL, Dodds JA, Grill LK. Rapid detection of plant RNA viruses by dot blot hybridization Plant Molecular Biology Reporter. 1: 21-25. DOI: 10.1007/BF02680258 |
0.388 |
|
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