Joshua T. Herbeck, Ph.D. - Publications

Affiliations: 
2002 University of California, Berkeley, Berkeley, CA, United States 
Area:
Genetics, Entomology Biology

65 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Chohan BH, Kingston H, Tseng AS, Sambai B, Guthrie BL, Wilkinson E, Giandhari J, Mbogo LW, Monroe-Wise A, Masyuko S, Bosire R, Ludwig-Barron NT, Sinkele W, Bukusi D, de Oliviera T, ... ... Herbeck J, et al. Virologic non-suppression and HIV drug resistance among people who inject drugs and their sexual and injecting partners in Kenya. Aids Research and Human Retroviruses. PMID 38063008 DOI: 10.1089/AID.2023.0068  0.503
2023 Aung SWKH, Kingston H, Mbogo LW, Sambai B, Monroe-Wise A, Ludwig-Barron NT, Bukusi D, Sinkele W, Gitau E, Masyuko S, Herbeck JT, Farquhar C, Guthrie BL. Prevalence and correlates of violence among sexual and injecting partners of people who inject drugs living with HIV in Kenya: a cross-sectional study. Harm Reduction Journal. 20: 164. PMID 37919736 DOI: 10.1186/s12954-023-00895-7  0.406
2023 Reid MC, Mittler JE, Murphy JT, Stansfield SE, Goodreau SM, Abernethy N, Herbeck JT. Evolution of HIV virulence in response to disease-modifying vaccines: A modeling study. Vaccine. PMID 37714749 DOI: 10.1016/j.vaccine.2023.08.071  0.309
2023 McLaren PJ, Porreca I, Iaconis G, Mok HP, Mukhopadhyay S, Karakoc E, Cristinelli S, Pomilla C, Bartha I, Thorball CW, Tough RH, Angelino P, Kiar CS, Carstensen T, Fatumo S, ... ... Herbeck JT, et al. Author Correction: Africa-specific human genetic variation near CHD1L associates with HIV-1 load. Nature. PMID 37670157 DOI: 10.1038/s41586-023-06591-7  0.424
2023 McLaren PJ, Porreca I, Iaconis G, Mok HP, Mukhopadhyay S, Karakoc E, Cristinelli S, Pomilla C, Bartha I, Thorball CW, Tough RH, Angelino P, Kiar CS, Carstensen T, Fatumo S, ... ... Herbeck JT, et al. Africa-specific human genetic variation near CHD1L associates with HIV-1 load. Nature. PMID 37532928 DOI: 10.1038/s41586-023-06370-4  0.529
2023 Tordoff DM, Minalga B, Trejo A, Shook A, Kerani RP, Herbeck JT. Lessons learned from community engagement regarding phylodynamic research with molecular HIV surveillance data. Journal of the International Aids Society. e26111. PMID 37408448 DOI: 10.1002/jia2.26111  0.322
2023 Mulinge MM, Oluoch JO, Abisi HK, Otieno LE, Anzala O, Wamalwa DC, Nduati RW, Kimani J, Herbeck J, McKinnon L. Age and CD4+ T cell counts are inversely associated with HIV drug resistance mutations in treatment naive female sex workers. Medicine. 102: e34060. PMID 37327289 DOI: 10.1097/MD.0000000000034060  0.371
2023 Doshi S, Kingston H, Tseng AS, Chohan BH, Sambai B, Guthrie BL, Monroe-Wise A, Mbogo LW, Masyuko S, Tram KH, Sinkele W, Macharia P, Bukusi D, Herbeck JT, Farquhar C. SARS-CoV-2 antibody prevalence, correlates, and access to harm reduction services among people who inject drugs living with and without HIV and their partners in Kenya. Harm Reduction Journal. 20: 21. PMID 36823596 DOI: 10.1186/s12954-023-00754-5  0.4
2022 Goodreau SM, Stansfield SE, Mittler JE, Murphy JT, Abernethy NF, Gottlieb GS, Reid MC, Burke JC, Pollock ED, Herbeck JT. Why does age at HIV infection correlate with set point viral load? An evolutionary hypothesis. Epidemics. 41: 100629. PMID 36162386 DOI: 10.1016/j.epidem.2022.100629  0.325
2022 Buskin SE, Lechtenberg RJ, Slaughter FA, Herbeck JT, Kerani RP, Golden MR, Dombrowski JC. A public health approach to monitoring HIV with resistance to HIV pre-exposure prophylaxis. Plos One. 17: e0272958. PMID 36037154 DOI: 10.1371/journal.pone.0272958  0.414
2022 Tseng AS, Sambai B, Monroe-Wise A, Mbogo LW, Ludwig-Barron NT, Masyuko SJ, Chohan BH, Scott JD, Sinkele W, Herbeck JT, Farquhar C, Guthrie BL. Assisted partner services for people who inject drugs: Index characteristics associated with untreated HIV in partners. Journal of Acquired Immune Deficiency Syndromes (1999). PMID 35969466 DOI: 10.1097/QAI.0000000000003062  0.368
2022 Tordoff DM, Kerani RP, Glick SN, Hood J, Golden MR, Lechtenberg R, Buskin S, Herbeck JT. Molecular Epidemiology of Individuals Experiencing Unstable Housing or Living Homeless at HIV Diagnosis: Analysis of HIV Surveillance Data in King County, Washington. Aids and Behavior. PMID 35445995 DOI: 10.1007/s10461-022-03689-3  0.483
2022 Swan DA, Rolland M, Herbeck JT, Schiffer JT, Reeves DB. Evolution during primary HIV infection does not require adaptive immune selection. Proceedings of the National Academy of Sciences of the United States of America. 119. PMID 35145025 DOI: 10.1073/pnas.2109172119  0.41
2022 Sambai BC, Kingston H, Monroe-Wise A, Mbogo L, Juma E, Ludwig-Barron N, Guthrie BL, Bukusi D, Chohan BH, Scott J, Bosire R, Dunbar M, Macharia P, Masyuko S, Sinkele W, ... Herbeck JT, et al. Characteristics associated with HIV and hepatitis C seroprevalence among sexual and injecting partners of HIV positive persons who inject drugs in Nairobi and coastal Kenya. Bmc Infectious Diseases. 22: 73. PMID 35062890 DOI: 10.1186/s12879-022-07036-8  0.402
2021 Shook AG, Buskin SE, Golden M, Dombrowski JC, Herbeck J, Lechtenberg RJ, Kerani R. Community and Provider Perspectives on Molecular HIV Surveillance and Cluster Detection and Response for HIV Prevention: Qualitative Findings From King County, Washington. The Journal of the Association of Nurses in Aids Care : Janac. 33: 270-282. PMID 35500058 DOI: 10.1097/JNC.0000000000000308  0.407
2021 Long JE, Tordoff DM, Reisner SL, Dasgupta S, Mayer KH, Mullins JI, Lama JR, Herbeck JT, Duerr A. HIV transmission patterns among transgender women, their cisgender male partners, and cisgender MSM in Lima, Peru: A molecular epidemiologic and phylodynamic analysis. Lancet Regional Health. Americas. 6. PMID 35178526 DOI: 10.1016/j.lana.2021.100121  0.428
2021 Buskin SE, Erly SJ, Glick SN, Lechtenberg RJ, Kerani RP, Herbeck JT, Dombrowski JC, Bennett AB, Slaughter FA, Barry MP, Neme S, Quinnan-Hostein L, Bryan A, Golden MR. Detection and Response to an HIV Cluster: People Living Homeless and Using Drugs in Seattle, Washington. American Journal of Preventive Medicine. 61: S160-S169. PMID 34686286 DOI: 10.1016/j.amepre.2021.04.037  0.443
2021 Lewitus E, Sanders-Buell E, Bose M, O'Sullivan AM, Poltavee K, Li Y, Bai H, Mdluli T, Donofrio G, Slike B, Zhao H, Wong K, Chen L, Miller S, Lee J, ... ... Herbeck JT, et al. RV144 vaccine imprinting constrained HIV-1 evolution following breakthrough infection. Virus Evolution. 7: veab057. PMID 34532060 DOI: 10.1093/ve/veab057  0.363
2021 Mbogo LW, Sambai B, Monroe-Wise A, Ludwig-Barron NT, Guthrie BL, Bukusi D, Chohan B, Macharia P, Dunbar M, Juma E, Sinkele W, Gitau E, Tseng AS, Bosire R, Masyuko S, ... ... Herbeck J, et al. Participation in methadone programs improves antiretroviral uptake and HIV viral suppression among people who inject drugs in Kenya. Journal of Substance Abuse Treatment. 108587. PMID 34391587 DOI: 10.1016/j.jsat.2021.108587  0.472
2021 Monroe-Wise A, Mbogo L, Guthrie B, Bukusi D, Sambai B, Chohan B, Scott J, Cherutich P, Musyoki H, Bosire R, Dunbar M, Macharia P, Masyuko S, Wilkinson E, De Oliveira T, ... ... Herbeck J, et al. Peer-mediated HIV assisted partner services to identify and link to care HIV-positive and HCV-positive people who inject drugs: a cohort study protocol. Bmj Open. 11: e041083. PMID 33895711 DOI: 10.1136/bmjopen-2020-041083  0.427
2021 Peebles K, Mittler JE, Goodreau SM, Murphy JT, Reid MC, Abernethy N, Gottlieb GS, Barnabas RV, Herbeck JT. Risk compensation after HIV-1 vaccination may accelerate viral adaptation and reduce cost-effectiveness: a modeling study. Scientific Reports. 11: 6798. PMID 33762616 DOI: 10.1038/s41598-021-85487-w  0.324
2021 Stansfield SE, Herbeck JT, Gottlieb GS, Abernethy NF, Murphy JT, Mittler JE, Goodreau SM. Test-and-treat coverage and HIV virulence evolution among men who have sex with men. Virus Evolution. 7: veab011. PMID 33633867 DOI: 10.1093/ve/veab011  0.382
2020 Tordoff DM, Buskin S, Lechtenberg R, Golden MR, Kerani RP, Herbeck JT. Combining traditional and molecular epidemiology methods to quantify local HIV transmission among foreign-born residents of King County, Washington. Aids (London, England). PMID 33315589 DOI: 10.1097/QAD.0000000000002783  0.463
2020 Erly SJ, Herbeck JT, Kerani RP, Reuer JR. Characterization of Molecular Cluster Detection and Evaluation of Cluster Investigation Criteria Using Machine Learning Methods and Statewide Surveillance Data in Washington State. Viruses. 12. PMID 31991877 DOI: 10.3390/V12020142  0.316
2019 Mittler JE, Murphy JT, Stansfield SE, Peebles KC, Gottlieb GS, Abernethy NF, Reid MC, Goodreau SM, Herbeck JT. Large benefits to youth-focused HIV treatment-as-prevention efforts in generalized heterosexual populations: An agent-based simulation model. Plos Computational Biology. 15: e1007561. PMID 31846456 DOI: 10.1371/journal.pcbi.1007561  0.358
2019 Tordoff D, Herbeck J, Buskin S, Lechtenberg R, Golden M, Kerani R. O19.4 Molecular epidemiology of HIV among foreign-born residents of king county, washington, USA, using HIV surveillance data Sexually Transmitted Infections. 95. DOI: 10.1136/Sextrans-2019-Sti.213  0.569
2018 Goodreau SM, Stansfield SE, Murphy JT, Peebles KC, Gottlieb GS, Abernethy NF, Herbeck JT, Mittler JE. Relational concurrency, stages of infection, and the evolution of HIV set point viral load. Virus Evolution. 4: vey032. PMID 30483403 DOI: 10.1093/ve/vey032  0.425
2018 Stansfield SE, Mittler JE, Gottlieb GS, Murphy JT, Hamilton DT, Detels R, Wolinsky SM, Jacobson LP, Margolick JB, Rinaldo CR, Herbeck JT, Goodreau SM. Sexual role and HIV-1 set point viral load among men who have sex with men. Epidemics. PMID 30193771 DOI: 10.1016/J.Epidem.2018.08.006  0.352
2018 Stekler JD, Milne R, Payant R, Beck I, Herbeck J, Maust B, Deng W, Tapia K, Holte S, Maenza J, Stevens CE, Mullins JI, Collier AC, Frenkel LM. Transmission of HIV-1 drug resistance mutations within partner-pairs: A cross-sectional study of a primary HIV infection cohort. Plos Medicine. 15: e1002537. PMID 29584723 DOI: 10.1371/Journal.Pmed.1002537  0.486
2018 Grabowski MK, Herbeck JT, Poon AFY. Genetic Cluster Analysis for HIV Prevention. Current Hiv/Aids Reports. PMID 29460226 DOI: 10.1007/S11904-018-0384-1  0.496
2017 Herbeck JT, Peebles K, Edlefsen PT, Rolland M, Murphy JT, Gottlieb GS, Abernethy N, Mullins JI, Mittler JE, Goodreau SM. HIV population-level adaptation can rapidly diminish the impact of a partially effective vaccine. Vaccine. PMID 29241646 DOI: 10.1016/J.Vaccine.2017.12.004  0.35
2017 Herbeck JT, Kerani RP, Poon AFY. What Proportion of Hiv-Infected Foreign-Born Individuals in The U.S. Have Been Infected After Immigrating to The U.S.? Journal of Acquired Immune Deficiency Syndromes (1999). PMID 29189418 DOI: 10.1097/Qai.0000000000001594  0.449
2017 Vandormael A, Bärnighausen T, Herbeck J, Tomita A, Phillips A, Pillay D, de Oliveira T, Tanser F. Longitudinal trends in the prevalence of detectable HIV viremia: Population-based evidence from rural KwaZulu-Natal, South Africa. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 29186391 DOI: 10.1093/Cid/Cix976  0.519
2017 Vandormael A, de Oliveira T, Tanser F, Bärnighausen T, Herbeck JT. High percentage of undiagnosed HIV cases within a hyperendemic South African community: a population-based study. Journal of Epidemiology and Community Health. PMID 29175867 DOI: 10.1136/Jech-2017-209713  0.556
2016 Herbeck JT, Mittler JE, Gottlieb GS, Goodreau SM, Murphy JT, Cori A, Pickles M, Fraser C. Evolution of HIV virulence in response to widespread scale up of antiretroviral therapy: a modeling study. Virus Evolution. 2: vew028. PMID 29492277 DOI: 10.1093/ve/vew028  0.521
2016 Blanquart F, Grabowski MK, Herbeck J, Nalugoda F, Serwadda D, Eller MA, Robb ML, Gray R, Kigozi G, Laeyendecker O, Lythgoe KA, Nakigozi G, Quinn TC, Reynolds SJ, Wawer MJ, et al. A transmission-virulence evolutionary trade-off explains attenuation of HIV-1 in Uganda. Elife. 5. PMID 27815945 DOI: 10.7554/Elife.20492  0.482
2016 Wolf E, Herbeck J, Van Rompaey S, Kitahata MM, Thomas KK, Pepper G, Frenkel L. Phylogenetic evidence of HIV-1 transmission between adult and adolescent men who have sex with men. Aids Research and Human Retroviruses. PMID 27762596 DOI: 10.1089/AID.2016.0061  0.388
2016 Nedellec R, Herbeck J, Hunt PW, Deeks SG, Mullins JI, Anton ED, Reeves JD, Mosier DE. High Sequence Diversity and Rapid Virus Turnover Contribute to Higher Rates of Coreceptor Switching in Treatment-Experienced Subjects with HIV-1 Viremia. Aids Research and Human Retroviruses. PMID 27604829 DOI: 10.1089/Aid.2016.0153  0.444
2016 Kerani RP, Herbeck JT, Buskin SE, Dombrowksi JC, Bennett A, Barash E, Barbee LA, Golden MR. Evidence of Local HIV Transmission in the African Community of King County, Washington. Journal of Immigrant and Minority Health / Center For Minority Public Health. PMID 27395379 DOI: 10.1007/S10903-016-0458-3  0.571
2016 Herbeck J, Tanser F. Community viral load as an index of HIV transmission potential. The Lancet. Hiv. 3: e152-4. PMID 27036988 DOI: 10.1016/S2352-3018(16)00036-9  0.5
2016 Blanquart F, Grabowski MK, Herbeck J, Nalugoda F, Serwadda D, Eller MA, Robb ML, Gray R, Kigozi G, Laeyendecker O, Lythgoe KA, Nakigozi G, Quinn TC, Reynolds SJ, Wawer MJ, et al. Author response: A transmission-virulence evolutionary trade-off explains attenuation of HIV-1 in Uganda Elife. DOI: 10.7554/Elife.20492.024  0.54
2015 McLaren PJ, Coulonges C, Bartha I, Lenz TL, Deutsch AJ, Bashirova A, Buchbinder S, Carrington MN, Cossarizza A, Dalmau J, De Luca A, Goedert JJ, Gurdasani D, Haas DW, Herbeck JT, et al. Polymorphisms of large effect explain the majority of the host genetic contribution to variation of HIV-1 virus load. Proceedings of the National Academy of Sciences of the United States of America. PMID 26553974 DOI: 10.1073/Pnas.1514867112  0.5
2015 Janes H, Herbeck JT, Tovanabutra S, Thomas R, Frahm N, Duerr A, Hural J, Corey L, Self SG, Buchbinder SP, McElrath MJ, O'Connell RJ, Paris RM, Rerks-Ngarm S, Nitayaphan S, et al. HIV-1 infections with multiple founders are associated with higher viral loads than infections with single founders. Nature Medicine. PMID 26322580 DOI: 10.1038/Nm.3932  0.58
2015 Pillay D, Herbeck J, Cohen MS, de Oliveira T, Fraser C, Ratmann O, Brown AL, Kellam P. PANGEA-HIV: phylogenetics for generalised epidemics in Africa. The Lancet. Infectious Diseases. 15: 259-61. PMID 25749217 DOI: 10.1016/S1473-3099(15)70036-8  0.593
2015 Herbeck J, Ghorai S, Chen L, Rinaldo CR, Margolick JB, Detels R, Jacobson L, Wolinsky S, Mullins JI. p21(WAF1/CIP1) RNA expression in highly HIV-1 exposed, uninfected individuals. Plos One. 10: e0119218. PMID 25746435 DOI: 10.1371/Journal.Pone.0119218  0.509
2014 Herbeck J, Celum C. The changing virulence of HIV. The Lancet. Hiv. 1: e99-e100. PMID 26424124 DOI: 10.1016/S2352-3018(14)00004-6  0.549
2014 Dennis AM, Herbeck JT, Brown AL, Kellam P, de Oliveira T, Pillay D, Fraser C, Cohen MS. Phylogenetic studies of transmission dynamics in generalized HIV epidemics: an essential tool where the burden is greatest? Journal of Acquired Immune Deficiency Syndromes (1999). 67: 181-95. PMID 24977473 DOI: 10.1097/Qai.0000000000000271  0.525
2014 Herbeck JT, Mittler JE, Gottlieb GS, Mullins JI. An HIV epidemic model based on viral load dynamics: value in assessing empirical trends in HIV virulence and community viral load. Plos Computational Biology. 10: e1003673. PMID 24945322 DOI: 10.1371/Journal.Pcbi.1003673  0.577
2013 McLaren PJ, Coulonges C, Ripke S, van den Berg L, Buchbinder S, Carrington M, Cossarizza A, Dalmau J, Deeks SG, Delaneau O, De Luca A, Goedert JJ, Haas D, Herbeck JT, Kathiresan S, et al. Association study of common genetic variants and HIV-1 acquisition in 6,300 infected cases and 7,200 controls. Plos Pathogens. 9: e1003515. PMID 23935489 DOI: 10.1371/Journal.Ppat.1003515  0.551
2012 Herbeck JT, Müller V, Maust BS, Ledergerber B, Torti C, Di Giambenedetto S, Gras L, Günthard HF, Jacobson LP, Mullins JI, Gottlieb GS. Is the virulence of HIV changing? A meta-analysis of trends in prognostic markers of HIV disease progression and transmission. Aids (London, England). 26: 193-205. PMID 22089381 DOI: 10.1097/Qad.0B013E32834Db418  0.561
2011 Müller V, Fraser C, Herbeck JT. A strong case for viral genetic factors in HIV virulence. Viruses. 3: 204-16. PMID 21994727 DOI: 10.3390/V3030204  0.572
2011 Nikolova M, Carriere M, Jenabian MA, Limou S, Younas M, Kök A, Huë S, Seddiki N, Hulin A, Delaneau O, Schuitemaker H, Herbeck JT, Mullins JI, Muhtarova M, Bensussan A, et al. CD39/adenosine pathway is involved in AIDS progression. Plos Pathogens. 7: e1002110. PMID 21750674 DOI: 10.1371/Journal.Ppat.1002110  0.364
2011 Herbeck JT, Rolland M, Liu Y, McLaughlin S, McNevin J, Zhao H, Wong K, Stoddard JN, Raugi D, Sorensen S, Genowati I, Birditt B, McKay A, Diem K, Maust BS, et al. Demographic processes affect HIV-1 evolution in primary infection before the onset of selective processes. Journal of Virology. 85: 7523-34. PMID 21593162 DOI: 10.1128/Jvi.02697-10  0.553
2011 Bol SM, Moerland PD, Limou S, van Remmerden Y, Coulonges C, van Manen D, Herbeck JT, Fellay J, Sieberer M, Sietzema JG, van 't Slot R, Martinson J, Zagury JF, Schuitemaker H, van 't Wout AB. Genome-wide association study identifies single nucleotide polymorphism in DYRK1A associated with replication of HIV-1 in monocyte-derived macrophages. Plos One. 6: e17190. PMID 21364930 DOI: 10.1371/Journal.Pone.0017190  0.562
2011 Herbeck JT, Rolland M, Liu Y, McLaughlin S, McNevin J, Diem K, Collier AC, McElrath MJ, Mullins JI. 175 HIV-1 Evolution in Primary Infection is Affected by Stochastic Followed by Selective Processes Jaids Journal of Acquired Immune Deficiency Syndromes. 56: 73. DOI: 10.1097/01.Qai.0000397358.45921.C4  0.523
2010 Boutwell CL, Rolland MM, Herbeck JT, Mullins JI, Allen TM. Viral evolution and escape during acute HIV-1 infection. The Journal of Infectious Diseases. 202: S309-14. PMID 20846038 DOI: 10.1086/655653  0.57
2010 Limou S, Coulonges C, Herbeck JT, van Manen D, An P, Le Clerc S, Delaneau O, Diop G, Taing L, Montes M, van't Wout AB, Gottlieb GS, Therwath A, Rouzioux C, Delfraissy JF, et al. Multiple-cohort genetic association study reveals CXCR6 as a new chemokine receptor involved in long-term nonprogression to AIDS. The Journal of Infectious Diseases. 202: 908-15. PMID 20704485 DOI: 10.1086/655782  0.313
2010 Herbeck JT, Gottlieb GS, Winkler CA, Nelson GW, An P, Maust BS, Wong KG, Troyer JL, Goedert JJ, Kessing BD, Detels R, Wolinsky SM, Martinson J, Buchbinder S, Kirk GD, et al. Multistage genomewide association study identifies a locus at 1q41 associated with rate of HIV-1 disease progression to clinical AIDS. The Journal of Infectious Diseases. 201: 618-26. PMID 20064070 DOI: 10.1086/649842  0.53
2009 Herbeck JT, Rolland MT, Deng WC, Collier AC, Mullins JI. P07-06. HIV-1 transmission and early evolution: Whole genome analysis Retrovirology. 6. DOI: 10.1186/1742-4690-6-S3-P104  0.524
2008 Herbeck JT, Gottlieb GS, Li X, Hu Z, Detels R, Phair J, Rinaldo C, Jacobson LP, Margolick JB, Mullins JI. Lack of evidence for changing virulence of HIV-1 in North America. Plos One. 3: e1525. PMID 18253479 DOI: 10.1371/Journal.Pone.0001525  0.524
2007 Rolland M, Brander C, Nickle DC, Herbeck JT, Gottlieb GS, Campbell MS, Maust BS, Mullins JI. HIV-1 over time: fitness loss or robustness gain? Nature Reviews. Microbiology. 5: C1. PMID 17703224 DOI: 10.1038/Nrmicro1594-C1  0.526
2007 Herbeck JT, Lyagoba F, Moore SW, Shindo N, Biryahwaho B, Kaleebu P, Mullins JI. Prevalence and genetic diversity of HIV type 1 subtypes A and D in women attending antenatal clinics in Uganda. Aids Research and Human Retroviruses. 23: 755-60. PMID 17531003 DOI: 10.1089/Aid.2006.0237.A  0.386
2007 Bhattacharya T, Daniels M, Heckerman D, Foley B, Frahm N, Kadie C, Carlson J, Yusim K, McMahon B, Gaschen B, Mallal S, Mullins JI, Nickle DC, Herbeck J, Rousseau C, et al. Founder effects in the assessment of HIV polymorphisms and HLA allele associations. Science (New York, N.Y.). 315: 1583-6. PMID 17363674 DOI: 10.1126/Science.1131528  0.406
2007 Gottlieb GS, Hawes SE, Nickle DC, Herbeck JT, Kiviat NB, Mullins JI, Sow PS. Presenting plasma HIV RNA level and rate of CD4 T-cell decline. Jama. 297: 805; author reply 80. PMID 17327518 DOI: 10.1001/Jama.297.8.805-A  0.407
2006 Herbeck JT, Nickle DC, Learn GH, Gottlieb GS, Curlin ME, Heath L, Mullins JI. Human immunodeficiency virus type 1 env evolves toward ancestral states upon transmission to a new host. Journal of Virology. 80: 1637-44. PMID 16439520 DOI: 10.1128/Jvi.80.4.1637-1644.2006  0.525
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