Julie E. Baggs, Ph.D. - Publications

2005 University of Virginia, Charlottesville, VA 
Animal Physiology Biology, Molecular Biology

24 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Merrick D, Mistry K, Wu J, Gresko N, Baggs JE, Hogenesch JB, Sun Z, Caplan MJ. Polycystin-1 regulates bone development through an interaction with the transcriptional co-activator taz. Human Molecular Genetics. PMID 30215740 DOI: 10.1093/hmg/ddy322  0.96
2018 Giovannone AJ, Winterstein C, Bhattaram P, Reales E, Low SH, Baggs JE, Xu M, Lalli MA, Hogenesch JB, Weimbs T. Soluble syntaxin 3 functions as a transcriptional regulator. The Journal of Biological Chemistry. PMID 29475951 DOI: 10.1074/jbc.RA117.000874  0.96
2017 Ehlen JC, Brager AJ, Baggs J, Pinckney L, Gray CL, DeBruyne JP, Esser KA, Takahashi JS, Paul KN. Bmal1 function in skeletal muscle regulates sleep. Elife. 6. PMID 28726633 DOI: 10.7554/eLife.26557  0.68
2015 Manderfield LJ, Engleka KA, Aghajanian H, Gupta M, Yang S, Li L, Baggs JE, Hogenesch JB, Olson EN, Epstein JA. Pax3 and Hippo Signaling Coordinate Melanocyte Gene Expression in Neural Crest. Cell Reports. 10: 841. PMID 30849859 DOI: 10.1016/j.celrep.2015.01.041  0.96
2015 DeBruyne JP, Baggs JE, Sato TK, Hogenesch JB. Ubiquitin ligase Siah2 regulates RevErbα degradation and the mammalian circadian clock. Proceedings of the National Academy of Sciences of the United States of America. 112: 12420-5. PMID 26392558 DOI: 10.1073/pnas.1501204112  1
2015 Beiting DP, Hidano S, Baggs JE, Geskes JM, Fang Q, Wherry EJ, Hunter CA, Roos DS, Cherry S. The Orphan Nuclear Receptor TLX Is an Enhancer of STAT1-Mediated Transcription and Immunity to Toxoplasma gondii. Plos Biology. 13: e1002200. PMID 26196739 DOI: 10.1371/journal.pbio.1002200  1
2014 Manderfield LJ, Engleka KA, Aghajanian H, Gupta M, Yang S, Li L, Baggs JE, Hogenesch JB, Olson EN, Epstein JA. Pax3 and hippo signaling coordinate melanocyte gene expression in neural crest. Cell Reports. 9: 1885-95. PMID 25466249 DOI: 10.1016/j.celrep.2014.10.061  1
2014 Zhang J, Fan J, Venneti S, Cross JR, Takagi T, Bhinder B, Djaballah H, Kanai M, Cheng EH, Judkins AR, Pawel B, Baggs J, Cherry S, Rabinowitz JD, Thompson CB. Asparagine plays a critical role in regulating cellular adaptation to glutamine depletion. Molecular Cell. 56: 205-18. PMID 25242145 DOI: 10.1016/j.molcel.2014.08.018  1
2014 Anafi RC, Lee Y, Sato TK, Venkataraman A, Ramanathan C, Kavakli IH, Hughes ME, Baggs JE, Growe J, Liu AC, Kim J, Hogenesch JB. Machine learning helps identify CHRONO as a circadian clock component. Plos Biology. 12: e1001840. PMID 24737000 DOI: 10.1371/journal.pbio.1001840  1
2013 Miller MF, Cohen ED, Baggs JE, Hogenesch JB, Morrisey EE. High throughput genomic screen identifies multiple factors that promote cooperative Wnt signaling. Plos One. 8: e55782. PMID 23383281 DOI: 10.1371/journal.pone.0055782  1
2012 Miller MF, Cohen ED, Baggs JE, Lu MM, Hogenesch JB, Morrisey EE. Wnt ligands signal in a cooperative manner to promote foregut organogenesis. Proceedings of the National Academy of Sciences of the United States of America. 109: 15348-53. PMID 22949635 DOI: 10.1073/pnas.1201583109  1
2012 Merrick D, Chapin H, Baggs JE, Yu Z, Somlo S, Sun Z, Hogenesch JB, Caplan MJ. The γ-secretase cleavage product of polycystin-1 regulates TCF and CHOP-mediated transcriptional activation through a p300-dependent mechanism. Developmental Cell. 22: 197-210. PMID 22178500 DOI: 10.1016/j.devcel.2011.10.028  1
2010 Baggs JE, Hogenesch JB. Genomics and systems approaches in the mammalian circadian clock. Current Opinion in Genetics & Development. 20: 581-7. PMID 20926286 DOI: 10.1016/j.gde.2010.08.009  1
2010 Baggs JE, Hughes ME, Hogenesch JB. The network as the target. Wiley Interdisciplinary Reviews. Systems Biology and Medicine. 2: 127-33. PMID 20836017 DOI: 10.1002/wsbm.57  1
2010 Paschos GK, Baggs JE, Hogenesch JB, FitzGerald GA. The role of clock genes in pharmacology. Annual Review of Pharmacology and Toxicology. 50: 187-214. PMID 20055702 DOI: 10.1146/annurev.pharmtox.010909.105621  1
2009 McCarthy EV, Baggs JE, Geskes JM, Hogenesch JB, Green CB. Generation of a novel allelic series of cryptochrome mutants via mutagenesis reveals residues involved in protein-protein interaction and CRY2-specific repression. Molecular and Cellular Biology. 29: 5465-76. PMID 19687303 DOI: 10.1128/MCB.00641-09  1
2009 Hughes ME, DiTacchio L, Hayes KR, Vollmers C, Pulivarthy S, Baggs JE, Panda S, Hogenesch JB. Harmonics of circadian gene transcription in mammals. Plos Genetics. 5: e1000442. PMID 19343201 DOI: 10.1371/journal.pgen.1000442  1
2009 Baggs JE, Price TS, DiTacchio L, Panda S, Fitzgerald GA, Hogenesch JB. Network features of the mammalian circadian clock. Plos Biology. 7: e52. PMID 19278294 DOI: 10.1371/journal.pbio.1000052  1
2008 Price TS, Baggs JE, Curtis AM, Fitzgerald GA, Hogenesch JB. WAVECLOCK: wavelet analysis of circadian oscillation. Bioinformatics (Oxford, England). 24: 2794-5. PMID 18931366 DOI: 10.1093/bioinformatics/btn521  1
2006 Sato TK, Yamada RG, Ukai H, Baggs JE, Miraglia LJ, Kobayashi TJ, Welsh DK, Kay SA, Ueda HR, Hogenesch JB. Feedback repression is required for mammalian circadian clock function. Nature Genetics. 38: 312-9. PMID 16474406 DOI: 10.1038/ng1745  1
2006 Baggs JE, Green CB. Functional analysis of nocturnin: a circadian clock-regulated gene identified by differential display. Methods in Molecular Biology (Clifton, N.J.). 317: 243-54. PMID 16264233 DOI: 10.1385/1-59259-968-0:243  1
2005 Baggs JE, Hayes KR, Hogenesch JB. Comparative genomics as a tool in the understanding of eukaryotic transcriptional regulation. Current Opinion in Genetics & Development. 15: 634-9. PMID 16226457 DOI: 10.1016/j.gde.2005.09.012  1
2005 Hayes KR, Baggs JE, Hogenesch JB. Circadian clocks are seeing the systems biology light. Genome Biology. 6: 219. PMID 15892879 DOI: 10.1186/gb-2005-6-5-219  1
2003 Baggs JE, Green CB. Nocturnin, a deadenylase in Xenopus laevis retina: a mechanism for posttranscriptional control of circadian-related mRNA. Current Biology : Cb. 13: 189-98. PMID 12573214 DOI: 10.1016/S0960-9822(03)00014-9  1
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