Denis Tsygankov, Ph.D. - Publications

Affiliations: 
2005 Georgia Institute of Technology, Atlanta, GA 
Area:
Optics Physics, Condensed Matter Physics

22/52 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Kang H, Tsygankov D, Lew DJ. Sensing a bud in the yeast morphogenesis checkpoint: a role for Elm1. Molecular Biology of the Cell. PMID 27053666 DOI: 10.1091/Mbc.E16-01-0014  1
2016 Kapustina M, Tsygankov D, Zhao J, Wessler T, Yang X, Chen A, Roach N, Elston TC, Wang Q, Jacobson K, Forest MG. Modeling the Excess Cell Surface Stored in a Complex Morphology of Bleb-Like Protrusions. Plos Computational Biology. 12: e1004841. PMID 27015526 DOI: 10.1371/Journal.Pcbi.1004841  1
2016 MacNevin CJ, Toutchkine A, Marston DJ, Hsu CW, Tsygankov D, Li L, Liu B, Qi T, Nguyen DV, Hahn KM. Ratiometric imaging using a single dye enables simultaneous visualization of Rac1 and Cdc42 activation. Journal of the American Chemical Society. PMID 26863024 DOI: 10.1021/Jacs.5B09764  1
2015 Gentry LR, Nishimura A, Cox AD, Martin TD, Tsygankov D, Nishida M, Elston TC, Der CJ. Divergent Roles of CAAX Motif-Signaled Posttranslational Modifications in the Regulation and Subcellular Localization of Ral GTPases. The Journal of Biological Chemistry. PMID 26216878 DOI: 10.1074/Jbc.M115.656710  1
2015 Wu CF, Chiou JG, Minakova M, Woods B, Tsygankov D, Zyla TR, Savage NS, Elston TC, Lew DJ. Role of competition between polarity sites in establishing a unique front Elife. 4. DOI: 10.7554/eLife.11611.001  1
2014 Chu PH, Tsygankov D, Berginski ME, Dagliyan O, Gomez SM, Elston TC, Karginov AV, Hahn KM. Engineered kinase activation reveals unique morphodynamic phenotypes and associated trafficking for Src family isoforms. Proceedings of the National Academy of Sciences of the United States of America. 111: 12420-5. PMID 25118278 DOI: 10.1073/Pnas.1404487111  1
2014 Tsygankov D, Chu PH, Chen H, Elston TC, Hahn KM. User-friendly tools for quantifying the dynamics of cellular morphology and intracellular protein clusters. Methods in Cell Biology. 123: 409-27. PMID 24974040 DOI: 10.1016/B978-0-12-420138-5.00022-7  1
2014 Karginov AV, Tsygankov D, Berginski M, Chu PH, Trudeau ED, Yi JJ, Gomez S, Elston TC, Hahn KM. Dissecting motility signaling through activation of specific Src-effector complexes. Nature Chemical Biology. 10: 286-90. PMID 24609359 DOI: 10.1038/Nchembio.1477  1
2014 Bilancia CG, Winkelman JD, Tsygankov D, Nowotarski SH, Sees JA, Comber K, Evans I, Lakhani V, Wood W, Elston TC, Kovar DR, Peifer M. Enabled negatively regulates diaphanous-driven actin dynamics in vitro and in vivo. Developmental Cell. 28: 394-408. PMID 24576424 DOI: 10.1016/J.Devcel.2014.01.015  1
2014 Tsygankov D, Bilancia CG, Vitriol EA, Hahn KM, Peifer M, Elston TC. CellGeo: a computational platform for the analysis of shape changes in cells with complex geometries. The Journal of Cell Biology. 204: 443-60. PMID 24493591 DOI: 10.1083/Jcb.201306067  1
2014 Allen RJ, Tsygankov D, Zawistowski JS, Elston TC, Hahn KM. Automated line scan analysis to quantify biosensor activity at the cell edge. Methods (San Diego, Calif.). 66: 162-7. PMID 23994242 DOI: 10.1016/J.Ymeth.2013.08.025  1
2011 Tsygankov D, Serohijos AW, Dokholyan NV, Elston TC. A physical model reveals the mechanochemistry responsible for dynein's processive motion. Biophysical Journal. 101: 144-50. PMID 21723824 DOI: 10.1016/J.Bpj.2011.05.043  1
2009 Tsygankov D, Liu Y, Sanoff HK, Sharpless NE, Elston TC. A quantitative model for age-dependent expression of the p16INK4a tumor suppressor. Proceedings of the National Academy of Sciences of the United States of America. 106: 16562-7. PMID 19805338 DOI: 10.1073/Pnas.0904405106  1
2009 Serohijos AW, Tsygankov D, Liu S, Elston TC, Dokholyan NV. Multiscale approaches for studying energy transduction in dynein. Physical Chemistry Chemical Physics : Pccp. 11: 4840-50. PMID 19506759 DOI: 10.1039/B902028D  1
2009 Tsygankov D, Serohijos AW, Dokholyan NV, Elston TC. Kinetic models for the coordinated stepping of cytoplasmic dynein. The Journal of Chemical Physics. 130: 025101. PMID 19154055 DOI: 10.1063/1.3050098  1
2008 Tsygankov D, Fisher ME. Kinetic models for mechanoenzymes: structural aspects under large loads. The Journal of Chemical Physics. 128: 015102. PMID 18190224 DOI: 10.1063/1.2803213  1
2007 Tsygankov D, Fisher ME. Mechanoenzymes under superstall and large assisting loads reveal structural features. Proceedings of the National Academy of Sciences of the United States of America. 104: 19321-6. PMID 18048321 DOI: 10.1073/Pnas.0709911104  1
2007 Tsygankov D, Lindén M, Fisher ME. Back-stepping, hidden substeps, and conditional dwell times in molecular motors. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 75: 021909. PMID 17358369 DOI: 10.1103/Physreve.75.021909  1
2006 Tsygankov D, Wiesenfeld K. Weak-link synchronization. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 73: 026222. PMID 16605444 DOI: 10.1103/Physreve.73.026222  1
2004 Tsygankov D, Wiesenfeld K. Spontaneous formation of inert oscillator pairs Physics Letters, Section a: General, Atomic and Solid State Physics. 325: 51-56. DOI: 10.1016/J.Physleta.2004.03.049  1
2002 Tsygankov D, Wiesenfeld K. Spontaneous synchronization in a Josephson transmission line. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 66: 036215. PMID 12366232 DOI: 10.1103/Physreve.66.036215  1
2000 Karelsky KV, Papkov VV, Petrosyan AS, Tsygankov DV. Particular solutions of shallow-water equations over a non-flat surface Physics Letters, Section a: General, Atomic and Solid State Physics. 271: 341-348. DOI: 10.1016/S0375-9601(00)00378-9  1
Low-probability matches
2020 Shaaya M, Fauser J, Zhurikhina A, Conage-Pough JE, Huyot V, Brennan M, Flower CT, Matsche J, Khan S, Natarajan V, Rehman J, Kota P, White FM, Tsygankov D, Karginov AV. Light-Regulated allosteric switch enables temporal and subcellular control of enzyme activity. Elife. 9. PMID 32965214 DOI: 10.7554/eLife.60647  0.01
2020 Pilcher W, Yang X, Zhurikhina A, Chernaya O, Xu Y, Qiu P, Tsygankov D. Shape-to-graph mapping method for efficient characterization and classification of complex geometries in biological images. Plos Computational Biology. 16: e1007758. PMID 32881897 DOI: 10.1371/Journal.Pcbi.1007758  0.01
2019 O'Shaughnessy EC, Stone OJ, LaFosse PK, Azoitei ML, Tsygankov D, Heddleston JM, Legant WR, Wittchen ES, Burridge K, Elston TC, Betzig E, Chew TL, Adalsteinsson D, Hahn KM. Software for lattice light-sheet imaging of FRET biosensors, illustrated with a new Rap1 biosensor. The Journal of Cell Biology. PMID 31444239 DOI: 10.1083/Jcb.201903019  0.01
2018 Moran KD, Kang H, Araujo AV, Zyla TR, Saito K, Tsygankov D, Lew DJ. Cell-cycle control of cell polarity in yeast. The Journal of Cell Biology. PMID 30459262 DOI: 10.1083/Jcb.201806196  0.01
2018 Chernaya O, Zhurikhina A, Hladyshau S, Pilcher W, Young KM, Ortner J, Andra V, Sulchek TA, Tsygankov D. Biomechanics of Endothelial Tubule Formation Differentially Modulated by Cerebral Cavernous Malformation Proteins. Iscience. 9: 347-358. PMID 30453164 DOI: 10.1016/J.Isci.2018.11.001  0.01
2018 Zhurikhina A, Qi T, Hahn KM, Elston TC, Tsygankov D. EdgeProps: A Computational Platform for Correlative Analysis of Cell Dynamics and Near-Edge Protein Activity. Methods in Molecular Biology (Clifton, N.J.). 1821: 47-56. PMID 30062404 DOI: 10.1007/978-1-4939-8612-5_4  0.01
2018 Lai H, Chiou JG, Zhurikhina A, Zyla TR, Tsygankov D, Lew DJ. Temporal regulation of morphogenetic events in Saccharomyces cerevisiae. Molecular Biology of the Cell. mbcE18030188. PMID 29927361 DOI: 10.1091/Mbc.E18-03-0188  0.01
2017 Lei W, Myers KR, Rui Y, Hladyshau S, Tsygankov D, Zheng JQ. Phosphoinositide-dependent enrichment of actin monomers in dendritic spines regulates synapse development and plasticity. The Journal of Cell Biology. PMID 28659327 DOI: 10.1083/Jcb.201612042  0.01
2015 Wu CF, Chiou JG, Minakova M, Woods B, Tsygankov D, Zyla TR, Savage NS, Elston TC, Lew DJ. Role of competition between polarity sites in establishing a unique front. Elife. 4. PMID 26523396 DOI: 10.7554/Elife.11611  0.01
2015 Tsygankov D, Pokhilko A, Sidorichev A, Ryabov S, Kozintsev O. The design proceb structural & logical representation in the concurrent engineering infocommunication environment Advances in Transdisciplinary Engineering. 2: 595-602. DOI: 10.3233/978-1-61499-544-9-595  0.01
2014 Kozintsev O, Pokhilko A, Kamalov L, Gorbachev I, Tsygankov D. A model for storing and presenting design procedures in a distributed service-oriented environment Advances in Transdisciplinary Engineering. 84-91. DOI: 10.3233/978-1-61499-440-4-84  0.01
2013 Kuzmin A, Tsygankov D. The emerging field of evaluation and the growth of the evaluation profession: The russian experience Canadian Journal of Program Evaluation. 28: 87-102.  0.01
2011 Tsygankov DV, Miroshnikov AM, Grishaeva AM. Determination of mutual solubility in the straight-run naphtha-propylene oxide-water system Chemistry and Technology of Fuels and Oils. 47: 28-33. DOI: 10.1007/s10553-011-0252-9  0.01
2010 Tsygankov D, Serohijos AW, Dokholyan NV, Elston T. A Coupling of Structural and Kinetic Models Reveals the Stepping Mechanics of Dynein Biophysical Journal. 98: 613a. DOI: 10.1016/J.Bpj.2009.12.3345  0.01
2009 Miroshnikov AM, Tsygankov DV. Mechanism of action of oxygenates Chemistry and Technology of Fuels and Oils. 45: 177-182. DOI: 10.1007/s10553-009-0118-6  0.01
2008 Tapsiev AP, Tsygankov DA. Parameters for impact fracture of brittle materials by plastic substances Journal of Mining Science. 44: 363-375. DOI: 10.1007/s10913-008-0040-z  0.01
2007 Tsygankov DB, Agasaryan EG, Terekhova DA. Clinical, pathogenetic and therapeutic aspects of panic disorder in patients with chronic alcoholism (review) Zhurnal Nevrologii I Psihiatrii Imeni S.S. Korsakova. 107: 63-70. PMID 18924468  0.01
2005 Tsygankov DA. New technology for underground mining of mica Izvestiya Vysshikh Uchebnykh Zavedenii, Gornyi Zhurnal. 7-11.  0.01
2005 Tsygankov DA. New technology for mechanized underground mining of natural stones Izvestiya Vysshikh Uchebnykh Zavedenii, Gornyi Zhurnal. 25-29.  0.01
2005 Tsygankov DA. One of applications of plastics in the mining technologies Plasticheskie Massy: Sintez Svojstva Pererabotka Primenenie. 46-49.  0.01
2004 Tsygankov DA. Safe technology for producing the lining marble Bezopastnost' Truda V Promyshlennosti. 37-39.  0.01
2003 Kyu NG, Tsygankov DA. Method for directional failure of rocks by plastic substances Journal of Mining Science. 39: 573-578. DOI: 10.1023/B:JOMI.0000036225.40139.da  0.01
2003 Tsygankov DA. The problems of environment protection at mining enterprises in Siberia Gornyi Zhurnal. 79-81.  0.01
2003 Kyu NG, Tsygankov DA. Method of directed destruction of rocks with plastic substances Fiziko-Tekhnicheskie Problemy Razrabotki Poleznykh Iskopaemykh. 57-63.  0.01
2002 Tsygankov DA. Ecological safety of exploitation of ore deposits Bezopastnost' Truda V Promyshlennosti. 20-25.  0.01
2019 Zhurikhina A, Chernaya O, Hladyshau S, Pilcher W, Young KM, Ortner J, Andra V, Sulchek TA, Tsygankov D. Biophysical Model Reveals the Role of CCM Proteins in Collective Behavior of Endothelial Cells Biophysical Journal. 116. DOI: 10.1016/J.Bpj.2018.11.2242  0
2019 Hladyshau S, Cohen S, Nie S, Tsygankov D. An Integrative Computational Model of Cell Migration Biophysical Journal. 116. DOI: 10.1016/J.Bpj.2018.11.2225  0
2015 Wu C, Chiou J, Minakova M, Woods B, Tsygankov D, Zyla TR, Savage NS, Elston TC, Lew DJ. Author response: Role of competition between polarity sites in establishing a unique front Elife. DOI: 10.7554/Elife.11611.030  0
2014 Karginov AV, Tsygankov D, Berginski M, Chu P, Trudeau ED, Yi JJ, Gomez S, Elston TC, Hahn KM. Correction: Corrigendum: Dissecting motility signaling through activation of specific Src-effector complexes Nature Chemical Biology. 10: 692-692. DOI: 10.1038/Nchembio0814-692C  0
2009 Tsygankov D, Elston TC. Dynein Stepping Flexibility as a Mechanism for Optimal Trafficking in the Cell Biophysical Journal. 96: 5-7. DOI: 10.1016/J.Bpj.2008.12.2614  0
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