| Year |
Citation |
Score |
| 2023 |
Duan Q, Zheng H, Qin Y, Yan J, Wang J, Burgess SM, Fan C. Stat3 Has a Different Role in Axon Growth During Development Than It Does in Axon Regeneration After Injury. Molecular Neurobiology. PMID 37775721 DOI: 10.1007/s12035-023-03644-w |
0.687 |
|
| 2023 |
Omori Y, Burgess SM. The Goldfish Genome and Its Utility for Understanding Gene Regulation and Vertebrate Body Morphology. Methods in Molecular Biology (Clifton, N.J.). 2707: 335-355. PMID 37668923 DOI: 10.1007/978-1-0716-3401-1_22 |
0.413 |
|
| 2023 |
García-López JP, Grimaldi A, Chen Z, Meneses C, Bravo-Tello K, Bresciani E, Banderas A, Burgess SM, Hernández PP, Feijoo CG. Author Correction: Ontogenetically distinct neutrophils differ in function and transcriptional profile in zebrafish. Nature Communications. 14: 5292. PMID 37652907 DOI: 10.1038/s41467-023-41038-7 |
0.534 |
|
| 2023 |
García-López JP, Grimaldi A, Chen Z, Meneses C, Bravo-Tello K, Bresciani E, Banderas A, Burgess SM, Hernández PP, Feijoo CG. Ontogenetically distinct neutrophils differ in function and transcriptional profile in zebrafish. Nature Communications. 14: 4942. PMID 37582932 DOI: 10.1038/s41467-023-40662-7 |
0.552 |
|
| 2022 |
Kon T, Fukuta K, Chen Z, Kon-Nanjo K, Suzuki K, Ishikawa M, Tanaka H, Burgess SM, Noguchi H, Toyoda A, Omori Y. Single-cell transcriptomics of the goldfish retina reveals genetic divergence in the asymmetrically evolved subgenomes after allotetraploidization. Communications Biology. 5: 1404. PMID 36572749 DOI: 10.1038/s42003-022-04351-3 |
0.61 |
|
| 2022 |
Jimenez E, Slevin CC, Song W, Chen Z, Frederickson SC, Gildea D, Wu W, Elkahloun AG, Ovcharenko I, Burgess SM. A regulatory network of Sox and Six transcription factors initiate a cell fate transformation during hearing regeneration in adult zebrafish. Cell Genomics. 2. PMID 36212030 DOI: 10.1016/j.xgen.2022.100170 |
0.807 |
|
| 2022 |
Baranasic D, Hörtenhuber M, Balwierz PJ, Zehnder T, Mukarram AK, Nepal C, Várnai C, Hadzhiev Y, Jimenez-Gonzalez A, Li N, Wragg J, D'Orazio FM, Relic D, Pachkov M, Díaz N, ... ... Burgess SM, et al. Multiomic atlas with functional stratification and developmental dynamics of zebrafish cis-regulatory elements. Nature Genetics. PMID 35789323 DOI: 10.1038/s41588-022-01089-w |
0.584 |
|
| 2022 |
Habicher J, Varshney GK, Waldmann L, Snitting D, Allalou A, Zhang H, Ghanem A, Öhman Mägi C, Dierker T, Kjellén L, Burgess SM, Ledin J. Chondroitin/dermatan sulfate glycosyltransferase genes are essential for craniofacial development. Plos Genetics. 18: e1010067. PMID 35192612 DOI: 10.1371/journal.pgen.1010067 |
0.689 |
|
| 2021 |
Sinclair JW, Hoying DR, Bresciani E, Nogare DD, Needle CD, Berger A, Wu W, Bishop K, Elkahloun AG, Chitnis A, Liu P, Burgess SM. The Warburg effect is necessary to promote glycosylation in the blastema during zebrafish tail regeneration. Npj Regenerative Medicine. 6: 55. PMID 34518542 DOI: 10.1038/s41536-021-00163-x |
0.769 |
|
| 2021 |
Jimenez E, Slevin CC, Colón-Cruz L, Burgess SM. Vestibular and Auditory Hair Cell Regeneration Following Targeted Ablation of Hair Cells With Diphtheria Toxin in Zebrafish. Frontiers in Cellular Neuroscience. 15: 721950. PMID 34489643 DOI: 10.3389/fncel.2021.721950 |
0.801 |
|
| 2021 |
Shin U, Nakhro K, Oh CK, Carrington B, Song H, Varshney GK, Kim Y, Song H, Jeon S, Robbins G, Kim S, Yoon S, Choi YJ, Kim YJ, Burgess S, et al. Large-scale generation and phenotypic characterization of zebrafish CRISPR mutants of DNA repair genes. Dna Repair. 107: 103173. PMID 34390914 DOI: 10.1016/j.dnarep.2021.103173 |
0.695 |
|
| 2021 |
Lin SJ, Vona B, Barbalho PG, Kaiyrzhanov R, Maroofian R, Petree C, Severino M, Stanley V, Varshney P, Bahena P, Alzahrani F, Alhashem A, Pagnamenta AT, Aubertin G, Estrada-Veras JI, ... ... Burgess SM, et al. Biallelic variants in KARS1 are associated with neurodevelopmental disorders and hearing loss recapitulated by the knockout zebrafish. Genetics in Medicine : Official Journal of the American College of Medical Genetics. PMID 34172899 DOI: 10.1038/s41436-021-01239-1 |
0.772 |
|
| 2021 |
Colón-Cruz L, Rodriguez-Morales R, Santana-Cruz A, Cantres-Velez J, Torrado-Tapias A, Lin SJ, Yudowski G, Kensler R, Marie B, Burgess SM, Renaud O, Varshney GK, Behra M. Cnr2 Is Important for Ribbon Synapse Maturation and Function in Hair Cells and Photoreceptors. Frontiers in Molecular Neuroscience. 14: 624265. PMID 33958989 DOI: 10.3389/fnmol.2021.624265 |
0.775 |
|
| 2021 |
Czimer D, Porok K, Csete D, Gyüre Z, Lavró V, Fülöp K, Chen Z, Gyergyák H, Tusnády GE, Burgess SM, Mócsai A, Váradi A, Varga M. A New Zebrafish Model for Pseudoxanthoma Elasticum. Frontiers in Cell and Developmental Biology. 9: 628699. PMID 33768091 DOI: 10.3389/fcell.2021.628699 |
0.589 |
|
| 2021 |
Ferla R, Alliegro M, Dell'Anno M, Nusco E, Cullen JM, Smith SN, Wolfsberg TG, O'Donnell P, Wang P, Nguyen AD, Chandler RJ, Chen Z, Burgess SM, Vite CH, Haskins ME, et al. Low incidence of hepatocellular carcinoma in mice and cats treated with systemic adeno-associated viral vectors. Molecular Therapy. Methods & Clinical Development. 20: 247-257. PMID 33473358 DOI: 10.1016/j.omtm.2020.11.015 |
0.545 |
|
| 2020 |
Ichino N, Serres MR, Urban RM, Urban MD, Treichel AJ, Schaefbauer KJ, Greif LE, Varshney GK, Skuster KJ, McNulty MS, Daby CL, Wang Y, Liao HK, El-Rass S, Ding Y, ... ... Burgess SM, et al. Building the vertebrate codex using the gene breaking protein trap library. Elife. 9. PMID 32779569 DOI: 10.7554/Elife.54572 |
0.7 |
|
| 2020 |
Banote RK, Chebli J, Şatır TM, Varshney GK, Camacho R, Ledin J, Burgess SM, Abramsson A, Zetterberg H. Amyloid precursor protein-b facilitates cell adhesion during early development in zebrafish. Scientific Reports. 10: 10127. PMID 32576936 DOI: 10.1038/s41598-020-66584-8 |
0.684 |
|
| 2020 |
Kon T, Omori Y, Fukuta K, Wada H, Watanabe M, Chen Z, Iwasaki M, Mishina T, Matsuzaki SS, Yoshihara D, Arakawa J, Kawakami K, Toyoda A, Burgess SM, Noguchi H, et al. The Genetic Basis of Morphological Diversity in Domesticated Goldfish. Current Biology : Cb. PMID 32392470 DOI: 10.1016/J.Cub.2020.04.034 |
0.567 |
|
| 2020 |
Pei W, Xu L, Chen Z, Slevin CC, Pettie KP, Wincovitch S, Burgess SM. A subset of SMN complex members have a specific role in tissue regeneration via ERBB pathway-mediated proliferation. Npj Regenerative Medicine. 5: 6. PMID 32218991 DOI: 10.1038/s41536-020-0089-0 |
0.602 |
|
| 2020 |
Burgess S. Decision letter: Yap-lin28a axis targets let7-Wnt pathway to restore progenitors for initiating regeneration Elife. DOI: 10.7554/Elife.55771.Sa1 |
0.378 |
|
| 2019 |
Kang HR, Gjorgjieva M, Smith SN, Brooks ED, Chen Z, Burgess SM, Chandler RJ, Waskowicz LR, Grady KM, Li S, Mithieux G, Venditti CP, Rajas F, Koeberl DD. Pathogenesis of Hepatic Tumors following Gene Therapy in Murine and Canine Models of Glycogen Storage Disease. Molecular Therapy. Methods & Clinical Development. 15: 383-391. PMID 31890731 DOI: 10.1016/J.Omtm.2019.10.016 |
0.547 |
|
| 2019 |
Rissone A, Jimenez E, Bishop K, Carrington B, Slevin C, Wincovitch SM, Sood R, Candotti F, Burgess SM. A model for reticular dysgenesis shows impaired sensory organ development and hair cell regeneration linked to cellular stress. Disease Models & Mechanisms. PMID 31727854 DOI: 10.1242/dmm.040170 |
0.797 |
|
| 2019 |
McElderry J, Carrington B, Bishop K, Kim E, Pei W, Chen Z, Ramanagoudr-Bhojappa R, Prakash A, Burgess SM, Liu PP, Sood R. Splicing factor DHX15 affects tp53 and mdm2 expression via alternate splicing and promoter usage. Human Molecular Genetics. PMID 31691804 DOI: 10.1093/Hmg/Ddz261 |
0.585 |
|
| 2019 |
Chen Z, Omori Y, Koren S, Shirokiya T, Kuroda T, Miyamoto A, Wada H, Fujiyama A, Toyoda A, Zhang S, Wolfsberg TG, Kawakami K, Phillippy AM, Mullikin JC, ... Burgess SM, et al. De novo assembly of the goldfish () genome and the evolution of genes after whole-genome duplication. Science Advances. 5: eaav0547. PMID 31249862 DOI: 10.1126/Sciadv.Aav0547 |
0.609 |
|
| 2019 |
Acevedo-Canabal A, Colón-Cruz L, Rodriguez-Morales R, Varshney GK, Burgess S, González-Sepúlveda L, Yudowski G, Behra M. Altered Swimming Behaviors in Zebrafish Larvae Lacking Cannabinoid Receptor 2. Cannabis and Cannabinoid Research. 4: 88-101. PMID 31236475 DOI: 10.1089/can.2018.0025 |
0.777 |
|
| 2018 |
Unal Eroglu A, Mulligan TS, Zhang L, White DT, Sengupta S, Nie C, Lu NY, Qian J, Xu L, Pei W, Burgess SM, Saxena MT, Mumm JS. Multiplexed CRISPR/Cas9 Targeting of Genes Implicated in Retinal Regeneration and Degeneration. Frontiers in Cell and Developmental Biology. 6: 88. PMID 30186835 DOI: 10.3389/fcell.2018.00088 |
0.411 |
|
| 2018 |
Pei W, Xu L, Huang SC, Pettie K, Idol J, Rissone A, Jimenez E, Sinclair JW, Slevin C, Varshney GK, Jones M, Carrington B, Bishop K, Huang H, Sood R, ... ... Burgess SM, et al. Guided genetic screen to identify genes essential in the regeneration of hair cells and other tissues. Npj Regenerative Medicine. 3: 11. PMID 29872546 DOI: 10.1038/s41536-018-0050-7 |
0.792 |
|
| 2017 |
Crawford NG, Kelly DE, Hansen MEB, Beltrame MH, Fan S, Bowman SL, Jewett E, Ranciaro A, Thompson S, Lo Y, Pfeifer SP, Jensen JD, Campbell MC, Beggs W, Hormozdiari F, ... ... Burgess S, et al. Loci associated with skin pigmentation identified in African populations. Science (New York, N.Y.). PMID 29025994 DOI: 10.1126/Science.Aan8433 |
0.791 |
|
| 2016 |
Pei W, Tanaka K, Huang SC, Xu L, Liu B, Sinclair J, Idol J, Varshney GK, Huang H, Lin S, Nussenblatt RB, Mori R, Burgess SM. Extracellular HSP60 triggers tissue regeneration and wound healing by regulating inflammation and cell proliferation. Npj Regenerative Medicine. 1. PMID 28936359 DOI: 10.1038/npjregenmed.2016.13 |
0.781 |
|
| 2016 |
Watkins-Chow DE, Varshney GK, Garrett LJ, Chen Z, Jimenez EA, Rivas C, Bishop KS, Sood R, Harper UL, Pavan WJ, Burgess SM. Highly-Efficient Cpf1-Mediated Gene Targeting in Mice Following High Concentration Pronuclear Injection. G3 (Bethesda, Md.). PMID 28040780 DOI: 10.1534/g3.116.038091 |
0.785 |
|
| 2016 |
Varshney GK, Carrington B, Pei W, Bishop K, Chen Z, Fan C, Xu L, Jones M, LaFave MC, Ledin J, Sood R, Burgess SM. A high-throughput functional genomics workflow based on CRISPR/Cas9-mediated targeted mutagenesis in zebrafish. Nature Protocols. 11: 2357-2375. PMID 27809318 DOI: 10.1038/Nprot.2016.141 |
0.815 |
|
| 2016 |
Burgess S. Genomics: A matched set of frog sequences. Nature. 538: 320-321. PMID 27762363 DOI: 10.1038/538320A |
0.445 |
|
| 2016 |
Varshney GK, Burgess SM. DNA-guided genome editing using structure-guided endonucleases. Genome Biology. 17: 187. PMID 27640875 DOI: 10.1186/s13059-016-1055-4 |
0.673 |
|
| 2016 |
Pei W, Xu L, Varshney GK, Carrington B, Bishop K, Jones M, Huang SC, Idol J, Pretorius PR, Beirl A, Schimmenti LA, Kindt KS, Sood R, Burgess SM. Additive reductions in zebrafish PRPS1 activity result in a spectrum of deficiencies modeling several human PRPS1-associated diseases. Scientific Reports. 6: 29946. PMID 27425195 DOI: 10.1038/Srep29946 |
0.683 |
|
| 2016 |
Chandler RJ, LaFave MC, Varshney GK, Burgess SM, Venditti CP. Genotoxicity in Mice Following AAV Gene Delivery: A Safety Concern for Human Gene Therapy? Molecular Therapy : the Journal of the American Society of Gene Therapy. 24: 198-201. PMID 26906613 DOI: 10.1038/Mt.2016.17 |
0.78 |
|
| 2016 |
Vrljicak P, Tao S, Varshney GK, Quach HN, Joshi A, LaFave MC, Burgess SM, Sampath K. Genome-Wide Analysis of Transposon and Retroviral Insertions Reveals Preferential Integrations in Regions of DNA Flexibility. G3 (Bethesda, Md.). PMID 26818075 DOI: 10.1534/G3.115.026849 |
0.796 |
|
| 2015 |
Varshney GK, Sood R, Burgess SM. Understanding and Editing the Zebrafish Genome. Advances in Genetics. 92: 1-52. PMID 26639914 DOI: 10.1016/bs.adgen.2015.09.002 |
0.693 |
|
| 2015 |
Marquart GD, Tabor KM, Brown M, Strykowski JL, Varshney GK, LaFave MC, Mueller T, Burgess SM, Higashijima S, Burgess HA. A 3D Searchable Database of Transgenic Zebrafish Gal4 and Cre Lines for Functional Neuroanatomy Studies. Frontiers in Neural Circuits. 9: 78. PMID 26635538 DOI: 10.3389/Fncir.2015.00078 |
0.793 |
|
| 2015 |
Varshney GK, Zhang S, Pei W, Adomako-Ankomah A, Fohtung J, Schaffer K, Carrington B, Maskeri A, Slevin C, Wolfsberg T, Ledin J, Sood R, Burgess SM. CRISPRz: a database of zebrafish validated sgRNAs. Nucleic Acids Research. PMID 26438539 DOI: 10.1093/Nar/Gkv998 |
0.775 |
|
| 2015 |
Carrington B, Varshney GK, Burgess SM, Sood R. CRISPR-STAT: an easy and reliable PCR-based method to evaluate target-specific sgRNA activity. Nucleic Acids Research. PMID 26253739 DOI: 10.1093/nar/gkv802 |
0.692 |
|
| 2015 |
Seiler C, Gebhart N, Zhang Y, Shinton SA, Li YS, Ross NL, Liu X, Li Q, Bilbee AN, Varshney GK, LaFave MC, Burgess SM, Balciuniene J, Balciunas D, Hardy RR, et al. Mutagenesis Screen Identifies agtpbp1 and eps15L1 as Essential for T lymphocyte Development in Zebrafish. Plos One. 10: e0131908. PMID 26161877 DOI: 10.1371/Journal.Pone.0131908 |
0.818 |
|
| 2015 |
LaFave MC, Varshney GK, Burgess SM. GeIST: a pipeline for mapping integrated DNA elements. Bioinformatics (Oxford, England). 31: 3219-21. PMID 26049161 DOI: 10.1093/Bioinformatics/Btv350 |
0.796 |
|
| 2015 |
Varshney GK, Pei W, LaFave MC, Idol J, Xu L, Gallardo V, Carrington B, Bishop K, Jones M, Li M, Harper U, Huang SC, Prakash A, Chen W, Sood R, ... ... Burgess SM, et al. High-throughput gene targeting and phenotyping in zebrafish using CRISPR/Cas9. Genome Research. 25: 1030-42. PMID 26048245 DOI: 10.1101/Gr.186379.114 |
0.814 |
|
| 2015 |
Yin L, Maddison LA, Li M, Kara N, LaFave MC, Varshney GK, Burgess SM, Patton JG, Chen W. Multiplex Conditional Mutagenesis Using Transgenic Expression of Cas9 and sgRNAs. Genetics. 200: 431-41. PMID 25855067 DOI: 10.1534/Genetics.115.176917 |
0.786 |
|
| 2015 |
Quach HN, Tao S, Vrljicak P, Joshi A, Ruan H, Sukumaran R, Varshney GK, LaFave MC, Burgess SM, Winkler C, Emelyanov A, Parinov S, Sampath K. A Multifunctional Mutagenesis System for Analysis of Gene Function in Zebrafish. G3 (Bethesda, Md.). 5: 1283-99. PMID 25840430 DOI: 10.1534/G3.114.015842 |
0.829 |
|
| 2015 |
Gallardo VE, Varshney GK, Lee M, Bupp S, Xu L, Shinn P, Crawford NP, Inglese J, Burgess SM. Phenotype-driven chemical screening in zebrafish for compounds that inhibit collective cell migration identifies multiple pathways potentially involved in metastatic invasion. Disease Models & Mechanisms. 8: 565-76. PMID 25810455 DOI: 10.1242/dmm.018689 |
0.66 |
|
| 2015 |
Chandler RJ, LaFave MC, Varshney GK, Trivedi NS, Carrillo-Carrasco N, Senac JS, Wu W, Hoffmann V, Elkahloun AG, Burgess SM, Venditti CP. Vector design influences hepatic genotoxicity after adeno-associated virus gene therapy. The Journal of Clinical Investigation. 125: 870-80. PMID 25607839 DOI: 10.1172/Jci79213 |
0.786 |
|
| 2015 |
Walia JS, Altaleb N, Bello A, Kruck C, LaFave MC, Varshney GK, Burgess SM, Chowdhury B, Hurlbut D, Hemming R, Kobinger GP, Triggs-Raine B. Long-term correction of sandhoff disease following intravenous delivery of rAAV9 to mouse neonates. Molecular Therapy : the Journal of the American Society of Gene Therapy. 23: 414-22. PMID 25515709 DOI: 10.1038/Mt.2014.240 |
0.766 |
|
| 2014 |
Renaud G, LaFave MC, Liang J, Wolfsberg TG, Burgess SM. trieFinder: an efficient program for annotating Digital Gene Expression (DGE) tags. Bmc Bioinformatics. 15: 329. PMID 25311246 DOI: 10.1186/1471-2105-15-329 |
0.794 |
|
| 2014 |
LaFave MC, Varshney GK, Vemulapalli M, Mullikin JC, Burgess SM. A defined zebrafish line for high-throughput genetics and genomics: NHGRI-1. Genetics. 198: 167-70. PMID 25009150 DOI: 10.1534/Genetics.114.166769 |
0.792 |
|
| 2014 |
LaFave MC, Varshney GK, Gildea DE, Wolfsberg TG, Baxevanis AD, Burgess SM. MLV integration site selection is driven by strong enhancers and active promoters. Nucleic Acids Research. 42: 4257-69. PMID 24464997 DOI: 10.1093/Nar/Gkt1399 |
0.803 |
|
| 2014 |
Xu H, Ye D, Behra M, Burgess S, Chen S, Lin F. Gβ1 controls collective cell migration by regulating the protrusive activity of leader cells in the posterior lateral line primordium. Developmental Biology. 385: 316-27. PMID 24201188 DOI: 10.1016/J.Ydbio.2013.10.027 |
0.78 |
|
| 2014 |
Varshney GK, Burgess SM. Mutagenesis and phenotyping resources in zebrafish for studying development and human disease. Briefings in Functional Genomics. 13: 82-94. PMID 24162064 DOI: 10.1093/bfgp/elt042 |
0.723 |
|
| 2013 |
Chen L, Stuart L, Ohsumi TK, Burgess S, Varshney GK, Dastur A, Borowsky M, Benes C, Lacy-Hulbert A, Schmidt EV. Transposon activation mutagenesis as a screening tool for identifying resistance to cancer therapeutics. Bmc Cancer. 13: 93. PMID 23442791 DOI: 10.1186/1471-2407-13-93 |
0.704 |
|
| 2013 |
Varshney GK, Lu J, Gildea DE, Huang H, Pei W, Yang Z, Huang SC, Schoenfeld D, Pho NH, Casero D, Hirase T, Mosbrook-Davis D, Zhang S, Jao LE, Zhang B, ... ... Burgess SM, et al. A large-scale zebrafish gene knockout resource for the genome-wide study of gene function. Genome Research. 23: 727-35. PMID 23382537 DOI: 10.1101/Gr.151464.112 |
0.719 |
|
| 2013 |
Varshney GK, Huang H, Zhang S, Lu J, Gildea DE, Yang Z, Wolfsberg TG, Lin S, Burgess SM. The Zebrafish Insertion Collection (ZInC): a web based, searchable collection of zebrafish mutations generated by DNA insertion. Nucleic Acids Research. 41: D861-4. PMID 23180778 DOI: 10.1093/nar/gks946 |
0.694 |
|
| 2012 |
Liang J, Wang D, Renaud G, Wolfsberg TG, Wilson AF, Burgess SM. The stat3/socs3a pathway is a key regulator of hair cell regeneration in zebrafish. [corrected]. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 32: 10662-73. PMID 22855815 DOI: 10.1523/Jneurosci.5785-10.2012 |
0.535 |
|
| 2012 |
Behra M, Gallardo VE, Bradsher J, Torrado A, Elkahloun A, Idol J, Sheehy J, Zonies S, Xu L, Shaw KM, Satou C, Higashijima S, Weinstein BM, Burgess SM. Transcriptional signature of accessory cells in the lateral line, using the Tnk1bp1:EGFP transgenic zebrafish line. Bmc Developmental Biology. 12: 6. PMID 22273551 DOI: 10.1186/1471-213X-12-6 |
0.773 |
|
| 2012 |
Milla LA, Cortés CR, Hodar C, Oñate MG, Cambiazo V, Burgess SM, Palma V. Yeast-based assay identifies novel Shh/Gli target genes in vertebrate development. Bmc Genomics. 13: 2. PMID 22214306 DOI: 10.1186/1471-2164-13-2 |
0.471 |
|
| 2012 |
Yan J, Burgess SM. Using a yeast inverse one-hybrid system to identify functional binding sites of transcription factors. Methods in Molecular Biology (Clifton, N.J.). 786: 275-90. PMID 21938633 DOI: 10.1007/978-1-61779-292-2_17 |
0.726 |
|
| 2012 |
LaFave MC, Varshney GK, Burgess SM. Investigation of retroviral integration preference via high-throughput sequencing Bmc Proceedings. 6. DOI: 10.1186/1753-6561-6-S6-P22 |
0.761 |
|
| 2011 |
Liang J, Renaud G, Burgess SM. Sequencing-based expression profiling in zebrafish. Methods in Cell Biology. 104: 379-99. PMID 21924174 DOI: 10.1016/B978-0-12-374814-0.00021-5 |
0.57 |
|
| 2011 |
Amsterdam A, Varshney GK, Burgess SM. Retroviral-mediated Insertional Mutagenesis in Zebrafish. Methods in Cell Biology. 104: 59-82. PMID 21924157 DOI: 10.1016/B978-0-12-374814-0.00004-5 |
0.694 |
|
| 2010 |
Gallardo VE, Liang J, Behra M, Elkahloun A, Villablanca EJ, Russo V, Allende ML, Burgess SM. Molecular dissection of the migrating posterior lateral line primordium during early development in zebrafish. Bmc Developmental Biology. 10: 120. PMID 21144052 DOI: 10.1186/1471-213X-10-120 |
0.82 |
|
| 2009 |
Liang J, Burgess SM. Gross and fine dissection of inner ear sensory epithelia in adult zebrafish (Danio rerio). Journal of Visualized Experiments : Jove. PMID 19488023 DOI: 10.3791/1211 |
0.55 |
|
| 2009 |
Behra M, Bradsher J, Sougrat R, Gallardo V, Allende ML, Burgess SM. Phoenix is required for mechanosensory hair cell regeneration in the zebrafish lateral line. Plos Genetics. 5: e1000455. PMID 19381250 DOI: 10.1371/Journal.Pgen.1000455 |
0.775 |
|
| 2009 |
Gomez GA, Veldman MB, Zhao Y, Burgess S, Lin S. Discovery and characterization of novel vascular and hematopoietic genes downstream of etsrp in zebrafish. Plos One. 4: e4994. PMID 19308258 DOI: 10.1371/Journal.Pone.0004994 |
0.478 |
|
| 2008 |
Jao LE, Maddison L, Chen W, Burgess SM. Using retroviruses as a mutagenesis tool to explore the zebrafish genome. Briefings in Functional Genomics & Proteomics. 7: 427-43. PMID 18977782 DOI: 10.1093/bfgp/eln038 |
0.693 |
|
| 2008 |
Zeng J, Yan J, Wang T, Mosbrook-Davis D, Dolan KT, Christensen R, Stormo GD, Haussler D, Lathrop RH, Brachmann RK, Burgess SM. Genome wide screens in yeast to identify potential binding sites and target genes of DNA-binding proteins. Nucleic Acids Research. 36: e8. PMID 18086703 DOI: 10.1093/Nar/Gkm1117 |
0.736 |
|
| 2008 |
Grinblat Y, Nyholm M, Taylor A, Burgess S. A role for zic genes during neural tube morphogenesis in zebrafish Developmental Biology. 319: 514-515. DOI: 10.1016/J.Ydbio.2008.05.172 |
0.418 |
|
| 2007 |
Wang D, Jao LE, Zheng N, Dolan K, Ivey J, Zonies S, Wu X, Wu K, Yang H, Meng Q, Zhu Z, Zhang B, Lin S, Burgess SM. Efficient genome-wide mutagenesis of zebrafish genes by retroviral insertions. Proceedings of the National Academy of Sciences of the United States of America. 104: 12428-33. PMID 17640903 DOI: 10.1073/Pnas.0705502104 |
0.581 |
|
| 2006 |
Antonellis A, Lee-Lin SQ, Wasterlain A, Leo P, Quezado M, Goldfarb LG, Myung K, Burgess S, Fischbeck KH, Green ED. Functional analyses of glycyl-tRNA synthetase mutations suggest a key role for tRNA-charging enzymes in peripheral axons. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 26: 10397-406. PMID 17035524 DOI: 10.1523/Jneurosci.1671-06.2006 |
0.431 |
|
| 2006 |
Ahmed ZM, Goodyear R, Riazuddin S, Lagziel A, Legan PK, Behra M, Burgess SM, Lilley KS, Wilcox ER, Riazuddin S, Griffith AJ, Frolenkov GI, Belyantseva IA, Richardson GP, Friedman TB. The tip-link antigen, a protein associated with the transduction complex of sensory hair cells, is protocadherin-15. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 26: 7022-34. PMID 16807332 DOI: 10.1523/JNEUROSCI.1163-06.2006 |
0.748 |
|
| 2006 |
Yan J, Xu L, Crawford G, Wang Z, Burgess SM. The forkhead transcription factor FoxI1 remains bound to condensed mitotic chromosomes and stably remodels chromatin structure. Molecular and Cellular Biology. 26: 155-68. PMID 16354687 DOI: 10.1128/Mcb.26.1.155-168.2006 |
0.717 |
|
| 2006 |
Wu X, Luke BT, Burgess SM. Redefining the common insertion site. Virology. 344: 292-5. PMID 16271739 DOI: 10.1016/j.virol.2005.08.047 |
0.454 |
|
| 2005 |
Hardison AL, Lichten L, Banerjee-Basu S, Becker TS, Burgess SM. The zebrafish gene claudinj is essential for normal ear function and important for the formation of the otoliths. Mechanisms of Development. 122: 949-58. PMID 15925497 DOI: 10.1016/j.mod.2005.03.009 |
0.438 |
|
| 2005 |
Wu X, Li Y, Crise B, Burgess SM, Munroe DJ. Weak palindromic consensus sequences are a common feature found at the integration target sites of many retroviruses. Journal of Virology. 79: 5211-4. PMID 15795304 DOI: 10.1128/JVI.79.8.5211-5214.2005 |
0.431 |
|
| 2005 |
Yant SR, Wu X, Huang Y, Garrison B, Burgess SM, Kay MA. High-resolution genome-wide mapping of transposon integration in mammals. Molecular and Cellular Biology. 25: 2085-94. PMID 15743807 DOI: 10.1128/Mcb.25.6.2085-2094.2005 |
0.571 |
|
| 2005 |
Nakai H, Wu X, Fuess S, Storm TA, Munroe D, Montini E, Burgess SM, Grompe M, Kay MA. Large-scale molecular characterization of adeno-associated virus vector integration in mouse liver. Journal of Virology. 79: 3606-14. PMID 15731255 DOI: 10.1128/Jvi.79.6.3606-3614.2005 |
0.473 |
|
| 2004 |
Youngman MJ, Hobbs AE, Burgess SM, Srinivasan M, Jensen RE. Mmm2p, a mitochondrial outer membrane protein required for yeast mitochondrial shape and maintenance of mtDNA nucleoids. The Journal of Cell Biology. 164: 677-88. PMID 14981098 DOI: 10.1083/Jcb.200308012 |
0.761 |
|
| 2004 |
Nakai H, Wu X, Fuess S, Storm T, Burgess S, Grompe M, Kay MA. 13. Hot Spots for rAAV2 Vector Integration in Mice Molecular Therapy. 9. DOI: 10.1016/J.Ymthe.2004.05.094 |
0.491 |
|
| 2003 |
Wu X, Li Y, Crise B, Burgess SM. Transcription start regions in the human genome are favored targets for MLV integration Science. 300: 1749-1751. PMID 12805549 DOI: 10.1126/science.1083413 |
0.449 |
|
| 2003 |
Nissen RM, Yan J, Amsterdam A, Hopkins N, Burgess SM. Zebrafish foxi one modulates cellular responses to Fgf signaling required for the integrity of ear and jaw patterning Development. 130: 2543-2554. PMID 12702667 DOI: 10.1242/Dev.00455 |
0.8 |
|
| 2002 |
Golling G, Amsterdam A, Sun Z, Antonelli M, Maldonado E, Chen W, Burgess S, Haldi M, Artzt K, Farrington S, Lin SY, Nissen RM, Hopkins N. Insertional mutagenesis in zebrafish rapidly identifies genes essential for early vertebrate development Nature Genetics. 31: 135-140. PMID 12006978 DOI: 10.1038/Ng896 |
0.79 |
|
| 2002 |
Burgess S, Reim G, Chen W, Hopkins N, Brand M. The zebrafish spiel-ohne-grenzen (spg) gene encodes the POU domain protein Pou2 related to mammalian Oct4 and is essential for formation of the midbrain and hindbrain, and for pre-gastrula morphogenesis Development. 129: 905-916. PMID 11861474 |
0.777 |
|
| 2002 |
Chen W, Burgess S, Golling G, Amsterdam A, Hopkins N. High-throughput selection of retrovirus producer cell lines leads to markedly improved efficiency of germ line-transmissible insertions in zebra fish Journal of Virology. 76: 2192-2198. PMID 11836396 DOI: 10.1128/Jvi.76.5.2192-2198.2002 |
0.751 |
|
| 2002 |
Chen W, Burgess S, Golling G, Amsterdam A, Hopkins N. High-Throughput Selection of Retrovirus Producer Cell Lines Leads to Markedly Improved Efficiency of Germ Line-Transmissible Insertions in Zebra Fish Journal of Virology. 76: 5300-5300. DOI: 10.1128/jvi.76.10.5300.2002 |
0.622 |
|
| 2000 |
Burgess S, Hopkins N. Use of pseudotyped retroviruses in zebrafish as genetic tags Methods in Enzymology. 327: 145-161. PMID 11044980 DOI: 10.1016/S0076-6879(00)27273-X |
0.683 |
|
| 1999 |
Amsterdam A, Burgess S, Golling G, Chen W, Sun Z, Townsend K, Farrington S, Haldi M, Hopkins N. A large-scale insertional mutagenesis screen in zebrafish Genes and Development. 13: 2713-2724. PMID 10541557 DOI: 10.1101/Gad.13.20.2713 |
0.69 |
|
| 1997 |
Amsterdam A, Yoon C, Allende M, Becker T, Kawakami K, Burgess S, Gaiano N, Hopkins N. Retrovirus-mediated insertional mutagenesis in zebrafish and identification of a molecular marker for embryonic germ cells. Cold Spring Harbor Symposia On Quantitative Biology. 62: 437-50. PMID 9598379 DOI: 10.1101/Sqb.1997.062.01.052 |
0.675 |
|
| 1994 |
Burgess SM, Delannoy M, Jensen RE. MMM1 encodes a mitochondrial outer membrane protein essential for establishing and maintaining the structure of yeast mitochondria Journal of Cell Biology. 126: 1375-1391. PMID 8089172 DOI: 10.1083/Jcb.126.6.1375 |
0.598 |
|
| 1991 |
Zon LI, Mather C, Burgess S, Bolce ME, Harland RM, Orkin SH. Expression of GATA-binding proteins during embryonic development in Xenopus laevis. Proceedings of the National Academy of Sciences of the United States of America. 88: 10642-6. PMID 1961730 DOI: 10.1073/Pnas.88.23.10642 |
0.425 |
|
| 1990 |
Zon LI, Tsai SF, Burgess S, Matsudaira P, Bruns GAP, Orkin SH. The major human erythroid DNA-binding protein (GF-1): Primary sequence and localization of the gene to the X chromosome Proceedings of the National Academy of Sciences of the United States of America. 87: 668-672. PMID 2300555 DOI: 10.1073/Pnas.87.2.668 |
0.437 |
|
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