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Yoshiho Ikeuchi, Ph.D. - Publications

Affiliations: 
2007-2013 Neurobiology Harvard Medical School, Boston, MA, United States 
 2013-2014 Anatomy and Neurobiology Washington University, Saint Louis, St. Louis, MO 
 2014- Institute of Industrial Science University of Tokyo, Bunkyō-ku, Tōkyō-to, Japan 
Area:
Axon growth, protein synthesis, motor nerve
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37 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Chanda A, Ikeuchi Y, Karve K, Sarkar A, Chandhoke AS, Deng L, Bonni A, Bonni S. Correction: PIAS1 and TIF1γ collaborate to promote SnoN SUMOylation and suppression of epithelial-mesenchymal transition. Cell Death and Differentiation. PMID 32811972 DOI: 10.1038/s41418-020-00611-z  0.44
2018 Chen X, Chanda A, Ikeuchi Y, Zhang X, Goodman JV, Reddy NC, Majidi SP, Wu DY, Smith SE, Godec A, Oldenborg A, Gabel HW, Zhao G, Bonni S, Bonni A. The Transcriptional Regulator SnoN Promotes the Proliferation of Cerebellar Granule Neuron Precursors in the Postnatal Mouse Brain. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 30425119 DOI: 10.1523/Jneurosci.0688-18.2018  0.4
2015 Huang J, Ikeuchi Y, Malumbres M, Bonni A. A Cdh1-APC/FMRP Ubiquitin Signaling Link Drives mGluR-Dependent Synaptic Plasticity in the Mammalian Brain. Neuron. 86: 726-39. PMID 25913861 DOI: 10.1016/J.Neuron.2015.03.049  0.76
2015 Ito H, Shiwaku H, Yoshida C, Homma H, Luo H, Chen X, Fujita K, Musante L, Fischer U, Frints SG, Romano C, Ikeuchi Y, Shimamura T, Imoto S, Miyano S, et al. In utero gene therapy rescues microcephaly caused by Pqbp1-hypofunction in neural stem progenitor cells. Molecular Psychiatry. 20: 459-71. PMID 25070536 DOI: 10.1038/Mp.2014.69  0.76
2014 Ito S, Akamatsu Y, Noma A, Kimura S, Miyauchi K, Ikeuchi Y, Suzuki T, Suzuki T. A single acetylation of 18 S rRNA is essential for biogenesis of the small ribosomal subunit in Saccharomyces cerevisiae. The Journal of Biological Chemistry. 289: 26201-12. PMID 25086048 DOI: 10.1074/Jbc.M114.593996  0.76
2014 Kimura S, Miyauchi K, Ikeuchi Y, Thiaville PC, Crécy-Lagard Vd, Suzuki T. Discovery of the β-barrel-type RNA methyltransferase responsible for N6-methylation of N6-threonylcarbamoyladenosine in tRNAs. Nucleic Acids Research. 42: 9350-65. PMID 25063302 DOI: 10.1093/Nar/Gku618  0.76
2014 Ikeuchi Y, Dadakhujaev S, Chandhoke AS, Huynh MA, Oldenborg A, Ikeuchi M, Deng L, Bennett EJ, Harper JW, Bonni A, Bonni S. TIF1γ protein regulates epithelial-mesenchymal transition by operating as a small ubiquitin-like modifier (SUMO) E3 ligase for the transcriptional regulator SnoN1. The Journal of Biological Chemistry. 289: 25067-78. PMID 25059663 DOI: 10.1074/Jbc.M114.575878  0.76
2013 Mejia LA, Litterman N, Ikeuchi Y, de la Torre-Ubieta L, Bennett EJ, Zhang C, Harper JW, Bonni A. A novel Hap1-Tsc1 interaction regulates neuronal mTORC1 signaling and morphogenesis in the brain. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 18015-21. PMID 24227713 DOI: 10.1523/Jneurosci.2290-13.2013  0.76
2013 Ikeuchi Y, de la Torre-Ubieta L, Matsuda T, Steen H, Okazawa H, Bonni A. The XLID protein PQBP1 and the GTPase Dynamin 2 define a signaling link that orchestrates ciliary morphogenesis in postmitotic neurons. Cell Reports. 4: 879-89. PMID 23994472 DOI: 10.1016/J.Celrep.2013.07.042  0.76
2013 Zhang C, Mejia LA, Huang J, Valnegri P, Bennett EJ, Anckar J, Jahani-Asl A, Gallardo G, Ikeuchi Y, Yamada T, Rudnicki M, Harper JW, Bonni A. The X-linked intellectual disability protein PHF6 associates with the PAF1 complex and regulates neuronal migration in the mammalian brain. Neuron. 78: 986-93. PMID 23791194 DOI: 10.1016/J.Neuron.2013.04.021  0.76
2012 Kimura S, Ikeuchi Y, Kitahara K, Sakaguchi Y, Suzuki T, Suzuki T. Base methylations in the double-stranded RNA by a fused methyltransferase bearing unwinding activity. Nucleic Acids Research. 40: 4071-85. PMID 22210896 DOI: 10.1093/Nar/Gkr1287  0.76
2011 Puram SV, Riccio A, Koirala S, Ikeuchi Y, Kim AH, Corfas G, Bonni A. A TRPC5-regulated calcium signaling pathway controls dendrite patterning in the mammalian brain. Genes & Development. 25: 2659-73. PMID 22135323 DOI: 10.1101/Gad.174060.111  0.76
2011 Puram SV, Kim AH, Ikeuchi Y, Wilson-Grady JT, Merdes A, Gygi SP, Bonni A. A CaMKIIβ signaling pathway at the centrosome regulates dendrite patterning in the brain. Nature Neuroscience. 14: 973-83. PMID 21725312 DOI: 10.1038/Nn.2857  0.76
2011 Litterman N, Ikeuchi Y, Gallardo G, O'Connell BC, Sowa ME, Gygi SP, Harper JW, Bonni A. An OBSL1-Cul7Fbxw8 ubiquitin ligase signaling mechanism regulates Golgi morphology and dendrite patterning. Plos Biology. 9: e1001060. PMID 21572988 DOI: 10.1371/Journal.Pbio.1001060  0.76
2011 Huynh MA, Ikeuchi Y, Netherton S, de la Torre-Ubieta L, Kanadia R, Stegmüller J, Cepko C, Bonni S, Bonni A. An isoform-specific SnoN1-FOXO1 repressor complex controls neuronal morphogenesis and positioning in the mammalian brain. Neuron. 69: 930-44. PMID 21382553 DOI: 10.1016/J.Neuron.2011.02.008  0.76
2010 Bilimoria PM, de la Torre-Ubieta L, Ikeuchi Y, Becker EB, Reiner O, Bonni A. A JIP3-regulated GSK3β/DCX signaling pathway restricts axon branching. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 30: 16766-76. PMID 21159948 DOI: 10.1523/Jneurosci.1362-10.2010  0.76
2010 Pot I, Ikeuchi Y, Bonni A, Bonni S. SnoN: bridging neurobiology and cancer biology. Current Molecular Medicine. 10: 667-73. PMID 20712586 DOI: 10.2174/156652410792630616  0.76
2010 de la Torre-Ubieta L, Gaudillière B, Yang Y, Ikeuchi Y, Yamada T, DiBacco S, Stegmüller J, Schüller U, Salih DA, Rowitch D, Brunet A, Bonni A. A FOXO-Pak1 transcriptional pathway controls neuronal polarity. Genes & Development. 24: 799-813. PMID 20395366 DOI: 10.1101/Gad.1880510  0.76
2010 Ikeuchi Y, Kimura S, Numata T, Nakamura D, Yokogawa T, Ogata T, Wada T, Suzuki T, Suzuki T. Agmatine-conjugated cytidine in a tRNA anticodon is essential for AUA decoding in archaea. Nature Chemical Biology. 6: 277-82. PMID 20139989 DOI: 10.1038/Nchembio.323  0.76
2009 Yang Y, Kim AH, Yamada T, Wu B, Bilimoria PM, Ikeuchi Y, de la Iglesia N, Shen J, Bonni A. A Cdc20-APC ubiquitin signaling pathway regulates presynaptic differentiation. Science (New York, N.Y.). 326: 575-8. PMID 19900895 DOI: 10.1126/Science.1177087  0.76
2009 Ikeuchi Y, Stegmüller J, Netherton S, Huynh MA, Masu M, Frank D, Bonni S, Bonni A. A SnoN-Ccd1 pathway promotes axonal morphogenesis in the mammalian brain. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 29: 4312-21. PMID 19339625 DOI: 10.1523/Jneurosci.0126-09.2009  0.76
2009 Chimnaronk S, Suzuki T, Manita T, Ikeuchi Y, Yao M, Suzuki T, Tanaka I. RNA helicase module in an acetyltransferase that modifies a specific tRNA anticodon. The Embo Journal. 28: 1362-73. PMID 19322199 DOI: 10.1038/Emboj.2009.69  0.76
2009 Kim AH, Puram SV, Bilimoria PM, Ikeuchi Y, Keough S, Wong M, Rowitch D, Bonni A. A centrosomal Cdc20-APC pathway controls dendrite morphogenesis in postmitotic neurons. Cell. 136: 322-36. PMID 19167333 DOI: 10.1016/J.Cell.2008.11.050  0.76
2008 Ikeuchi Y, Kitahara K, Suzuki T. The RNA acetyltransferase driven by ATP hydrolysis synthesizes N4-acetylcytidine of tRNA anticodon. The Embo Journal. 27: 2194-203. PMID 18668122 DOI: 10.1038/Emboj.2008.154  0.76
2007 Suzuki T, Ikeuchi Y, Noma A, Suzuki T, Sakaguchi Y. Mass spectrometric identification and characterization of RNA-modifying enzymes. Methods in Enzymology. 425: 211-29. PMID 17673085 DOI: 10.1016/S0076-6879(07)25009-8  0.76
2006 Takeda H, Toyooka T, Ikeuchi Y, Yokobori S, Okadome K, Takano F, Oshima T, Suzuki T, Endo Y, Hori H. The substrate specificity of tRNA (m1G37) methyltransferase (TrmD) from Aquifex aeolicus. Genes to Cells : Devoted to Molecular & Cellular Mechanisms. 11: 1353-65. PMID 17121543 DOI: 10.1111/J.1365-2443.2006.01022.X  0.76
2006 Numata T, Ikeuchi Y, Fukai S, Suzuki T, Nureki O. Snapshots of tRNA sulphuration via an adenylated intermediate. Nature. 442: 419-24. PMID 16871210 DOI: 10.1038/Nature04896  0.76
2006 Noma A, Kirino Y, Ikeuchi Y, Suzuki T. Biosynthesis of wybutosine, a hyper-modified nucleoside in eukaryotic phenylalanine tRNA. The Embo Journal. 25: 2142-54. PMID 16642040 DOI: 10.1038/Sj.Emboj.7601105  0.76
2006 Numata T, Ikeuchi Y, Fukai S, Adachi H, Matsumura H, Takano K, Murakami S, Inoue T, Mori Y, Sasaki T, Suzuki T, Nureki O. Crystallization and preliminary X-ray analysis of the tRNA thiolation enzyme MnmA from Escherichia coli complexed with tRNA(Glu). Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 62: 368-71. PMID 16582487 DOI: 10.1107/S174430910600738X  0.76
2006 Takano Y, Takayanagi N, Hori H, Ikeuchi Y, Suzuki T, Kimura A, Okuno T. A gene involved in modifying transfer RNA is required for fungal pathogenicity and stress tolerance of Colletotrichum lagenarium. Molecular Microbiology. 60: 81-92. PMID 16556222 DOI: 10.1111/J.1365-2958.2006.05080.X  0.76
2006 Numata T, Fukai S, Ikeuchi Y, Suzuki T, Nureki O. Structural basis for sulfur relay to RNA mediated by heterohexameric TusBCD complex. Structure (London, England : 1993). 14: 357-66. PMID 16472754 DOI: 10.1016/J.Str.2005.11.009  0.76
2006 Ikeuchi Y, Shigi N, Kato J, Nishimura A, Suzuki T. Mechanistic insights into sulfur relay by multiple sulfur mediators involved in thiouridine biosynthesis at tRNA wobble positions. Molecular Cell. 21: 97-108. PMID 16387657 DOI: 10.1016/J.Molcel.2005.11.001  0.76
2006 Ote T, Hashimoto M, Ikeuchi Y, Su'etsugu M, Suzuki T, Katayama T, Kato J. Involvement of the Escherichia coli folate-binding protein YgfZ in RNA modification and regulation of chromosomal replication initiation. Molecular Microbiology. 59: 265-75. PMID 16359333 DOI: 10.1111/J.1365-2958.2005.04932.X  0.76
2005 Ikeuchi Y, Soma A, Ote T, Kato J, Sekine Y, Suzuki T. molecular mechanism of lysidine synthesis that determines tRNA identity and codon recognition. Molecular Cell. 19: 235-46. PMID 16039592 DOI: 10.1016/J.Molcel.2005.06.007  0.76
2005 Nakanishi K, Fukai S, Ikeuchi Y, Soma A, Sekine Y, Suzuki T, Nureki O. Structural basis for lysidine formation by ATP pyrophosphatase accompanied by a lysine-specific loop and a tRNA-recognition domain. Proceedings of the National Academy of Sciences of the United States of America. 102: 7487-92. PMID 15894617 DOI: 10.1073/Pnas.0501003102  0.76
2004 Okamoto H, Watanabe K, Ikeuchi Y, Suzuki T, Endo Y, Hori H. Substrate tRNA recognition mechanism of tRNA (m7G46) methyltransferase from Aquifex aeolicus. The Journal of Biological Chemistry. 279: 49151-9. PMID 15358762 DOI: 10.1074/Jbc.M408209200  0.76
2003 Soma A, Ikeuchi Y, Kanemasa S, Kobayashi K, Ogasawara N, Ote T, Kato J, Watanabe K, Sekine Y, Suzuki T. An RNA-modifying enzyme that governs both the codon and amino acid specificities of isoleucine tRNA. Molecular Cell. 12: 689-98. PMID 14527414 DOI: 10.1016/S1097-2765(03)00346-0  0.76
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