Nozomi Nishimura - Publications

Affiliations: 
Cornell University, Ithaca, NY, United States 
Area:
blood flow, neurodegenerative disease

66 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Zhang Y, Bander ED, Lee Y, Muoser C, Schaffer CB, Nishimura N. Microvessel occlusions alter amyloid-beta plaque morphology in a mouse model of Alzheimer's disease. Journal of Cerebral Blood Flow and Metabolism : Official Journal of the International Society of Cerebral Blood Flow and Metabolism. 271678X19889092. PMID 31744388 DOI: 10.1177/0271678X19889092  0.56
2019 Macknik SL, Alexander RG, Caballero O, Chanovas J, Nielsen KJ, Nishimura N, Schaffer CB, Slovin H, Babayoff A, Barak R, Tang S, Ju N, Yazdan-Shahmorad A, Alonso JM, Malinskiy E, et al. Advanced Circuit and Cellular Imaging Methods in Nonhuman Primates. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 39: 8267-8274. PMID 31619496 DOI: 10.1523/JNEUROSCI.1168-19.2019  0.56
2019 Hachinski V, Einhäupl K, Ganten D, Alladi S, Brayne C, Stephan BCM, Sweeney MD, Zlokovic B, Iturria-Medina Y, Iadecola C, Nishimura N, Schaffer CB, Whitehead SN, Black SE, Østergaard L, et al. Special topic section: linkages among cerebrovascular, cardiovascular, and cognitive disorders: Preventing dementia by preventing stroke: The Berlin Manifesto. International Journal of Stroke : Official Journal of the International Stroke Society. 1747493019871915. PMID 31543058 DOI: 10.1177/1747493019871915  0.56
2019 Hachinski V, Einhäupl K, Ganten D, Alladi S, Brayne C, Stephan BCM, Sweeney MD, Zlokovic B, Iturria-Medina Y, Iadecola C, Nishimura N, Schaffer CB, Whitehead SN, Black SE, Østergaard L, et al. Preventing dementia by preventing stroke: The Berlin Manifesto. Alzheimer's & Dementia : the Journal of the Alzheimer's Association. 15: 961-984. PMID 31327392 DOI: 10.1016/j.jalz.2019.06.001  0.56
2019 Smith AF, Doyeux V, Berg M, Peyrounette M, Haft-Javaherian M, Larue AE, Slater JH, Lauwers F, Blinder P, Tsai P, Kleinfeld D, Schaffer CB, Nishimura N, Davit Y, Lorthois S. Brain Capillary Networks Across Species: A few Simple Organizational Requirements Are Sufficient to Reproduce Both Structure and Function. Frontiers in Physiology. 10: 233. PMID 30971935 DOI: 10.3389/fphys.2019.00233  0.56
2019 Haft-Javaherian M, Fang L, Muse V, Schaffer CB, Nishimura N, Sabuncu MR. Deep convolutional neural networks for segmenting 3D in vivo multiphoton images of vasculature in Alzheimer disease mouse models. Plos One. 14: e0213539. PMID 30865678 DOI: 10.1371/journal.pone.0213539  0.56
2019 Cruz Hernández JC, Bracko O, Kersbergen CJ, Muse V, Haft-Javaherian M, Berg M, Park L, Vinarcsik LK, Ivasyk I, Rivera DA, Kang Y, Cortes-Canteli M, Peyrounette M, Doyeux V, Smith A, ... ... Nishimura N, et al. Neutrophil adhesion in brain capillaries reduces cortical blood flow and impairs memory function in Alzheimer's disease mouse models. Nature Neuroscience. PMID 30742116 DOI: 10.1038/s41593-018-0329-4  0.56
2019 Chan S, Brophy M, Nishimura N, Schaffer CB. Aspirin treatment does not increase microhemorrhage size in young or aged mice. Plos One. 14: e0204295. PMID 30608925 DOI: 10.1371/journal.pone.0204295  0.56
2018 Nagappan S, Liu L, Fetcho R, Nguyen J, Nishimura N, Radwanski RE, Lieberman S, Baird-Daniel E, Ma H, Zhao M, Schaffer CB, Schwartz TH. In Vivo Femtosecond Laser Subsurface Cortical Microtransections Attenuate Acute Rat Focal Seizures. Cerebral Cortex (New York, N.Y. : 1991). PMID 30192931 DOI: 10.1093/cercor/bhy210  0.56
2018 Ahn SJ, Anrather J, Nishimura N, Schaffer CB. Diverse Inflammatory Response After Cerebral Microbleeds Includes Coordinated Microglial Migration and Proliferation. Stroke. PMID 29844029 DOI: 10.1161/STROKEAHA.117.020461  0.56
2017 Bollu T, Cornelius NR, Sunwoo J, Nishimura N, Schaffer CB, Doerschuk PC. Experimentally constrained circuit model of cortical arteriole networks for understanding flow redistribution due to occlusion and neural activation. Journal of Cerebral Blood Flow and Metabolism : Official Journal of the International Society of Cerebral Blood Flow and Metabolism. 271678X17741086. PMID 29130779 DOI: 10.1177/0271678X17741086  0.56
2016 Koyama M, Minale F, Shum J, Nishimura N, Schaffer CB, Fetcho JR. A circuit motif in the zebrafish hindbrain for a two alternative behavioral choice to turn left or right. Elife. 5. PMID 27502742 DOI: 10.7554/eLife.16808  0.56
2016 Rakhilin N, Barth B, Choi J, Muñoz NL, Kulkarni S, Jones JS, Small DM, Cheng YT, Cao Y, LaVinka C, Kan E, Dong X, Spencer M, Pasricha P, Nishimura N, et al. Simultaneous optical and electrical in vivo analysis of the enteric nervous system. Nature Communications. 7: 11800. PMID 27270085 DOI: 10.1038/ncomms11800  0.56
2015 Cohen R, Lata JP, Lee Y, Hernández JC, Nishimura N, Schaffer CB, Mukai C, Nelson JL, Brangman SA, Agrawal Y, Travis AJ. Use of Tethered Enzymes as a Platform Technology for Rapid Analyte Detection. Plos One. 10: e0142326. PMID 26605916 DOI: 10.1371/journal.pone.0142326  0.56
2015 Cornelius NR, Nishimura N, Suh M, Schwartz TH, Doerschuk PC. A mathematical model relating cortical oxygenated and deoxygenated hemoglobin flows and volumes to neural activity. Journal of Neural Engineering. 12: 046013. PMID 26045465 DOI: 10.1088/1741-2560/12/4/046013  0.56
2015 Chen HJ, Sun J, Huang Z, Hou H, Arcilla M, Rakhilin N, Joe DJ, Choi J, Gadamsetty P, Milsom J, Nandakumar G, Longman R, Zhou XK, Edwards R, Chen J, ... ... Nishimura N, et al. Comprehensive models of human primary and metastatic colorectal tumors in immunodeficient and immunocompetent mice by chemokine targeting. Nature Biotechnology. 33: 656-60. PMID 26006007 DOI: 10.1038/nbt.3239  0.56
2015 Shih AY, Rühlmann C, Blinder P, Devor A, Drew PJ, Friedman B, Knutsen PM, Lyden PD, Matéo C, Mellander L, Nishimura N, Schaffer CB, Tsai PS, Kleinfeld D. Robust and fragile aspects of cortical blood flow in relation to the underlying angioarchitecture. Microcirculation (New York, N.Y. : 1994). 22: 204-18. PMID 25705966 DOI: 10.1111/micc.12195  0.56
2015 Lindsey SE, Menon PG, Kowalski WJ, Shekhar A, Yalcin HC, Nishimura N, Schaffer CB, Butcher JT, Pekkan K. Growth and hemodynamics after early embryonic aortic arch occlusion. Biomechanics and Modeling in Mechanobiology. 14: 735-51. PMID 25416845 DOI: 10.1007/s10237-014-0633-1  0.56
2015 Ouzounov DG, Wang T, Horton NG, Cruz Hernández JC, Feng D, Nishimura N, Xu C. In vivo three-photon imaging of brain activity from cortical and subcortical neurons in intact mouse brain Optics and the Brain, Brain 2015 0.56
2014 Rosenthal JA, Huang CJ, Doody AM, Leung T, Mineta K, Feng DD, Wayne EC, Nishimura N, Leifer C, DeLisa MP, Mendez S, Putnam D. Mechanistic insight into the TH1-biased immune response to recombinant subunit vaccines delivered by probiotic bacteria-derived outer membrane vesicles. Plos One. 9: e112802. PMID 25426709 DOI: 10.1371/journal.pone.0112802  0.56
2014 Santisakultarm TP, Paduano CQ, Stokol T, Southard TL, Nishimura N, Skoda RC, Olbricht WL, Schafer AI, Silver RT, Schaffer CB. Stalled cerebral capillary blood flow in mouse models of essential thrombocythemia and polycythemia vera revealed by in vivo two-photon imaging. Journal of Thrombosis and Haemostasis : Jth. 12: 2120-30. PMID 25263265 DOI: 10.1111/jth.12738  0.56
2014 Ouzounov DG, Horton N, Wang T, Feng D, Nishimura N, Xu C. In Vivo three-photon calcium imaging of brain activity from layer 6 neurons in mouse brain Optics Infobase Conference Papers 0.56
2013 Shih AY, Nishimura N, Nguyen J, Friedman B, Lyden PD, Schaffer CB, Kleinfeld D. Optically induced occlusion of single blood vessels in rodent neocortex. Cold Spring Harbor Protocols. 2013: 1153-60. PMID 24298038 DOI: 10.1101/pdb.prot079509  0.56
2013 Davis AA, Farrar MJ, Nishimura N, Jin MM, Schaffer CB. Optoporation and genetic manipulation of cells using femtosecond laser pulses. Biophysical Journal. 105: 862-71. PMID 23972838 DOI: 10.1016/j.bpj.2013.07.012  0.56
2013 Cianchetti FA, Kim DH, Dimiduk S, Nishimura N, Schaffer CB. Stimulus-evoked calcium transients in somatosensory cortex are temporarily inhibited by a nearby microhemorrhage. Plos One. 8: e65663. PMID 23724147 DOI: 10.1371/journal.pone.0065663  0.56
2013 Nishimura N, Schaffer CB. Big effects from tiny vessels: imaging the impact of microvascular clots and hemorrhages on the brain. Stroke; a Journal of Cerebral Circulation. 44: S90-2. PMID 23709743 DOI: 10.1161/STROKEAHA.112.679621  0.56
2013 Huland DM, Charan K, Ouzounov DG, Jones JS, Nishimura N, Xu C. Three-photon excited fluorescence imaging of unstained tissue using a GRIN lens endoscope. Biomedical Optics Express. 4: 652-8. PMID 23667782 DOI: 10.1364/BOE.4.000652  0.56
2012 Shih AY, Driscoll JD, Drew PJ, Nishimura N, Schaffer CB, Kleinfeld D. Two-photon microscopy as a tool to study blood flow and neurovascular coupling in the rodent brain. Journal of Cerebral Blood Flow and Metabolism : Official Journal of the International Society of Cerebral Blood Flow and Metabolism. 32: 1277-309. PMID 22293983 DOI: 10.1038/jcbfm.2011.196  0.56
2012 Santisakultarm TP, Cornelius NR, Nishimura N, Schafer AI, Silver RT, Doerschuk PC, Olbricht WL, Schaffer CB. In vivo two-photon excited fluorescence microscopy reveals cardiac- and respiration-dependent pulsatile blood flow in cortical blood vessels in mice. American Journal of Physiology. Heart and Circulatory Physiology. 302: H1367-77. PMID 22268102 DOI: 10.1152/ajpheart.00417.2011  0.56
2012 Foley CP, Nishimura N, Neeves KB, Schaffer CB, Olbricht WL. Real-time imaging of perivascular transport of nanoparticles during convection-enhanced delivery in the rat cortex. Annals of Biomedical Engineering. 40: 292-303. PMID 22009318 DOI: 10.1007/s10439-011-0440-0  0.56
2012 Jones J, Chowdhury R, Jalloh D, Seo BK, Pandya JK, Schaffer CB, Nishimura N. In-vivo imaging of beating mouse heart with multiphoton microscopy Frontiers in Optics, Fio 2012 0.56
2011 Huynh J, Nishimura N, Rana K, Peloquin JM, Califano JP, Montague CR, King MR, Schaffer CB, Reinhart-King CA. Age-related intimal stiffening enhances endothelial permeability and leukocyte transmigration. Science Translational Medicine. 3: 112ra122. PMID 22158860 DOI: 10.1126/scitranslmed.3002761  0.56
2011 Rosidi NL, Zhou J, Pattanaik S, Wang P, Jin W, Brophy M, Olbricht WL, Nishimura N, Schaffer CB. Cortical microhemorrhages cause local inflammation but do not trigger widespread dendrite degeneration. Plos One. 6: e26612. PMID 22028924 DOI: 10.1371/journal.pone.0026612  0.56
2011 Zhao M, Nguyen J, Ma H, Nishimura N, Schaffer CB, Schwartz TH. Preictal and ictal neurovascular and metabolic coupling surrounding a seizure focus. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 31: 13292-300. PMID 21917812 DOI: 10.1523/JNEUROSCI.2597-11.2011  0.56
2011 Nguyen J, Nishimura N, Fetcho RN, Iadecola C, Schaffer CB. Occlusion of cortical ascending venules causes blood flow decreases, reversals in flow direction, and vessel dilation in upstream capillaries. Journal of Cerebral Blood Flow and Metabolism : Official Journal of the International Society of Cerebral Blood Flow and Metabolism. 31: 2243-54. PMID 21712834 DOI: 10.1038/jcbfm.2011.95  0.56
2011 Nguyen J, Ferdman J, Zhao M, Huland D, Saqqa S, Ma J, Nishimura N, Schwartz TH, Schaffer CB. Sub-surface, micrometer-scale incisions produced in rodent cortex using tightly-focused femtosecond laser pulses. Lasers in Surgery and Medicine. 43: 382-91. PMID 21674543 DOI: 10.1002/lsm.21054  0.56
2011 Stokol T, Esch MB, Nishimura N, Schaffer C, Daddona JL, Post DJ, Desai DP. Little channels, big disease: Using microfluidics to investigate cancer metastasis Asme 2011 9th International Conference On Nanochannels, Microchannels, and Minichannels, Icnmm 2011. 2: 655-661. DOI: 10.1115/ICNMM2011-58298  0.56
2010 Nishimura N, Rosidi NL, Iadecola C, Schaffer CB. Limitations of collateral flow after occlusion of a single cortical penetrating arteriole. Journal of Cerebral Blood Flow and Metabolism : Official Journal of the International Society of Cerebral Blood Flow and Metabolism. 30: 1914-27. PMID 20842163 DOI: 10.1038/jcbfm.2010.157  0.56
2010 Yalcin HC, Shekhar A, Nishimura N, Rane AA, Schaffer CB, Butcher JT. Two-photon microscopy-guided femtosecond-laser photoablation of avian cardiogenesis: noninvasive creation of localized heart defects. American Journal of Physiology. Heart and Circulatory Physiology. 299: H1728-35. PMID 20709864 DOI: 10.1152/ajpheart.00495.2010  0.56
2010 Kobat D, Durst ME, Nishimura N, Wong AW, Schaffer CB, Xu C. In vivo deep tissue imaging with long wavelength multiphoton excitation Progress in Biomedical Optics and Imaging - Proceedings of Spie. 7569. DOI: 10.1117/12.842292  0.56
2010 Cianchetti FA, Nishimura N, Schaffer CB. Stimulus-evoked calcium transients in somatosensory cortex are inhibited after a nearby microhemorrhage Optics Infobase Conference Papers 0.56
2010 Nishimura N. Nonlinear optical tools for studying small-stroke at microscopic scales Optics Infobase Conference Papers 0.56
2009 Kobat D, Durst ME, Nishimura N, Wong AW, Schaffer CB, Xu C. Deep tissue multiphoton microscopy using longer wavelength excitation. Optics Express. 17: 13354-64. PMID 19654740 DOI: 10.1364/OE.17.013354  0.56
2009 Foley CP, Nishimura N, Neeves KB, Schaffer CB, Olbricht WL. Flexible microfluidic devices supported by biodegradable insertion scaffolds for convection-enhanced neural drug delivery. Biomedical Microdevices. 11: 915-24. PMID 19353271 DOI: 10.1007/s10544-009-9308-6  0.56
2009 Devor A, Tian P, Nishimura N, Teng IC, Hillman EMC, Narayanan SN, Ulbert I, Boas DA, Kleinfeld D, Dale AM. Suppressed neuronal activity and concurrent arteriolar vasoconstriction may explain negative blood oxygenation level-dependent signal (Journal of Neuroscience (2007), (4452-4459)) Journal of Neuroscience. 29.  0.56
2008 Wang P, Foley CP, Nishimura N, Schaffer C, Olbricht WL. Convection-enhanced transport of polymeric nanoparticles in the perivascular space of the brain Aiche Annual Meeting, Conference Proceedings 0.56
2008 Nguyen J, Nishimura N, Iadecola C, Schaffer CB. Femtosecond laser-driven photodisruption to induce single venule occlusions in rodent brain Optics Infobase Conference Papers 0.56
2008 Nishimura N, Zhou J, Iadecola C, Schaffer CB. Femtosecond laser-induced microvascular clots trigger alzheimer's disease pathology Optics Infobase Conference Papers 0.56
2008 Shum J, Nishimura N, Fetcho JR, Schaffer CB. Ablation of the mauthner cell lateral dendrite using femtosecond laser pulses Optics Infobase Conference Papers 0.56
2007 Devor A, Tian P, Nishimura N, Teng IC, Hillman EM, Narayanan SN, Ulbert I, Boas DA, Kleinfeld D, Dale AM. Suppressed neuronal activity and concurrent arteriolar vasoconstriction may explain negative blood oxygenation level-dependent signal. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 27: 4452-9. PMID 17442830 DOI: 10.1523/JNEUROSCI.0134-07.2007  0.56
2007 Nishimura N, Schaffer CB, Friedman B, Lyden PD, Kleinfeld D. Penetrating arterioles are a bottleneck in the perfusion of neocortex. Proceedings of the National Academy of Sciences of the United States of America. 104: 365-70. PMID 17190804 DOI: 10.1073/pnas.0609551104  0.56
2006 Nishimura N, Schaffer CB, Friedman B, Tsai PS, Lyden PD, Kleinfeld D. Targeted insult to subsurface cortical blood vessels using ultrashort laser pulses: three models of stroke. Nature Methods. 3: 99-108. PMID 16432519 DOI: 10.1038/nmeth844  0.56
2006 Schaffer CB, Friedman B, Nishimura N, Schroeder LF, Tsai PS, Ebner FF, Lyden PD, Kleinfeld D. Two-photon imaging of cortical surface microvessels reveals a robust redistribution in blood flow after vascular occlusion. Plos Biology. 4: e22. PMID 16379497 DOI: 10.1371/journal.pbio.0040022  0.56
2006 Nishimura N, Schaffer CB, Kleinfeld D. In vivo manipulation of biological systems with femtosecond laser pulses Proceedings of Spie - the International Society For Optical Engineering. 6261. DOI: 10.1117/12.668886  0.56
2006 Devor A, Hillman EMC, Nishimura N, Ulbert I, Narayanan SN, Teng I, Dunn AK, Boas DA, Kleinfeld D, Dale AM. Applying optical imaging to study neurovascular coupling in cerebral cortex: From populational scale to single-cell singlevessel measurements Optics Infobase Conference Papers 0.56
2005 Nishimura N, Schaffera CB, Friedman B, Tsai PS, Lyden PD, Kleinfeld D. Two-photon imaging of cortical microvascular blood flow in response to single vessel occlusion Optics Infobase Conference Papers 0.56
2004 Nishimura N, Schaffer CB, Friedman B, Tsai PS, Lyden PD, Kleinfeld D. Targeted disruption of deep-lying neocortical microvessels in rat using ultrashort laser pulses Proceedings of Spie - the International Society For Optical Engineering. 5340: 179-187. DOI: 10.1117/12.555404  0.56
2003 Schaffer CB, Tsai PS, Nishimura N, Schroeder LF, Friedman B, Lyden PD, Ebner FF, Kleinfeld D. All optical thrombotic stroke model for near-surface blood vessels in rat: Focal illumination of exogenous photosensitizers combined with real-time two-photon imaging Proceedings of Spie - the International Society For Optical Engineering. 4978: 222-231. DOI: 10.1117/12.484208  0.56
2003 Schaffer CB, Ebner FF, Nishimura N, Friedman B, Tsai PS, Schroeder LF, Lyden PD, Kleinfeld D. Real-time two-photon fluorescence microscopy of blood flow dynamics following photothrombotic stroke in rat neocortex Conference Proceedings - Lasers and Electro-Optics Society Annual Meeting-Leos. 1: 307-308.  0.56
2002 Schaffer C, Nishimura N, Glezer E, Kim A, Mazur E. Dynamics of femtosecond laser-induced breakdown in water from femtoseconds to microseconds. Optics Express. 10: 196-203. PMID 19424350  0.56
2002 Schaffer CB, Nishimura N, Glezer EN, Kim AMT, Mazur E. Dynamics of femtosecond laser-induced breakdown in water from femtoseconds to microseconds Optics Express. 10: 196-203.  0.56
1999 Schaffer CB, Brodeur A, Nishimura N, Mazur E. Microscopic bulk damage in dielectric materials using nanojoule femtosecond laser pulses Iqec, International Quantum Electronics Conference Proceedings. 232.  0.56
1999 Schaffer CB, Brodeur A, Nishimura N, Mazur E. Laser-induced microexplosions in transparent materials: Microstructuring with nanojoules Proceedings of Spie - the International Society For Optical Engineering. 3616: 143-147.  0.56
1998 Nishimura N, Schaffer CB, Li EH, Mazur E. Tissue ablation with 100-fs and 200-ps laser pulses Annual International Conference of the Ieee Engineering in Medicine and Biology - Proceedings. 4: 1703-1706.  0.56
1998 Schaffer CB, Nishimura N, Mazur E. Thresholds for femtosecond laser-induced breakdown in bulk transparent solids and water Proceedings of Spie - the International Society For Optical Engineering. 3451: 2-8.  0.56
1997 Glezer EN, Schaffer CB, Nishimura N, Mazur E. Minimally disruptive laser-induced breakdown in water. Optics Letters. 22: 1817-9. PMID 18188376  0.56
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