Keith C. Cheng - Publications

Affiliations: 
Pennsylvania State University, State College, PA, United States 
Area:
Neuroscience Biology

69 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Ang KC, Canfield VA, Foster TC, Harbaugh TD, Early KA, Harter RL, Reid KP, Leong SL, Kawasawa Y, Liu D, Hawley JW, Cheng KC. Native American genetic ancestry and pigmentation allele contributions to skin color in a caribbean population. Elife. 12. PMID 37294081 DOI: 10.7554/eLife.77514  0.768
2023 Yakovlev MA, Liang K, Zaino CR, Vanselow DJ, Sugarman AL, Lin AY, La Riviere PJ, Zheng Y, Silverman JD, Leichty JC, Huang SX, Cheng KC. Quantitative Geometric Modeling of Blood Cells from X-ray Histotomograms of Whole Zebrafish Larvae. Biorxiv : the Preprint Server For Biology. PMID 37292910 DOI: 10.1101/2023.05.23.541939  0.794
2023 Kim HL, Li T, Kalsi N, Nguyen HTT, Shaw TA, Ang KC, Cheng KC, Ratan A, Peltier WR, Samanta D, Pratapneni M, Schuster SC, Horton BP. Prehistoric human migration between Sundaland and South Asia was driven by sea-level rise. Communications Biology. 6: 150. PMID 36739308 DOI: 10.1038/s42003-023-04510-0  0.754
2022 Cheng KC, Burdine RD, Dickinson ME, Ekker SC, Lin AY, Lloyd KCK, Lutz CM, MacRae CA, Morrison JH, O'Connor DH, Postlethwait JH, Rogers CD, Sanchez S, Simpson JH, Talbot WS, et al. Promoting validation and cross-phylogenetic integration in model organism research. Disease Models & Mechanisms. 15. PMID 36125045 DOI: 10.1242/dmm.049600  0.79
2022 Wu YT, Bennett HC, Chon U, Vanselow DJ, Zhang Q, Muñoz-Castañeda R, Cheng KC, Osten P, Drew PJ, Kim Y. Quantitative relationship between cerebrovascular network and neuronal cell types in mice. Cell Reports. 39: 110978. PMID 35732133 DOI: 10.1016/j.celrep.2022.110978  0.256
2022 Son S, Manjila SB, Newmaster KT, Wu YT, Vanselow DJ, Ciarletta M, Anthony TE, Cheng KC, Kim Y. Whole-Brain Wiring Diagram of Oxytocin System in Adult Mice. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 35606144 DOI: 10.1523/JNEUROSCI.0307-22.2022  0.257
2022 Yakovlev MA, Vanselow DJ, Ngu MS, Zaino CR, Katz SR, Ding Y, Parkinson D, Wang SY, Ang KC, La Riviere P, Cheng KC. A wide-field micro-computed tomography detector: micron resolution at half-centimetre scale. Journal of Synchrotron Radiation. 29: 505-514. PMID 35254315 DOI: 10.1107/S160057752101287X  0.718
2021 Katz SR, Yakovlev MA, Vanselow DJ, Ding Y, Lin AY, Parkinson DY, Wang Y, Canfield VA, Ang KC, Cheng KC. Whole-organism 3D quantitative characterization of zebrafish melanin by silver deposition micro-CT. Elife. 10. PMID 34528510 DOI: 10.7554/eLife.68920  0.751
2020 Yang H, Luan Y, Liu T, Lee HJ, Fang L, Wang Y, Wang X, Zhang B, Jin Q, Ang KC, Xing X, Wang J, Xu J, Song F, Sriranga I, ... ... Cheng KC, et al. A map of cis-regulatory elements and 3D genome structures in zebrafish. Nature. PMID 33239788 DOI: 10.1038/s41586-020-2962-9  0.764
2020 Van Nuffel S, Ang KC, Lin AY, Cheng KC. Chemical Imaging of Retinal Pigment Epithelium in Frozen Sections of Zebrafish Larvae Using ToF-SIMS. Journal of the American Society For Mass Spectrometry. PMID 33112610 DOI: 10.1021/jasms.0c00300  0.779
2020 Xue Y, Ye J, Zhou Q, Long LR, Antani S, Xue Z, Cornwell C, Zaino R, Cheng KC, Huang X. Selective synthetic augmentation with HistoGAN for improved histopathology image classification. Medical Image Analysis. 67: 101816. PMID 33080509 DOI: 10.1016/j.media.2020.101816  0.318
2019 Chon U, Vanselow DJ, Cheng KC, Kim Y. Enhanced and unified anatomical labeling for a common mouse brain atlas. Nature Communications. 10: 5067. PMID 31699990 DOI: 10.1038/S41467-019-13057-W  0.382
2019 Donaldson K, Buchanich JM, Grigson PS, Deneke E, Donaldson K, Vrana KE, Sacks DB, Kuehn GJ, Cardamone D, Pesce A, Smiley S, Nickley J, Krock K, Thomas R, Wilkerson ML, ... ... Cheng KC, et al. Abstracts of Presentations at the Association of Clinical Scientists 139 Meeting Hershey, PA, May 15-18, 2019. Annals of Clinical and Laboratory Science. 49: 403-416. PMID 31308044  0.697
2019 Ding Y, Vanselow DJ, Yakovlev MA, Katz SR, Lin AY, Clark DP, Vargas P, Xin X, Copper JE, Canfield VA, Ang KC, Wang Y, Xiao X, De Carlo F, van Rossum DB, ... ... Cheng K, et al. Computational 3D histological phenotyping of whole zebrafish by X-ray histotomography. Elife. 8. PMID 31063133 DOI: 10.7554/Elife.44898  0.751
2019 Ding Y, Vanselow DJ, Yakovlev MA, Katz SR, Lin AY, Clark DP, Vargas P, Xin X, Copper JE, Canfield VA, Ang KC, Wang Y, Xiao X, Carlo FD, Rossum DBv, ... ... Cheng KC, et al. Author response: Computational 3D histological phenotyping of whole zebrafish by X-ray histotomography Elife. DOI: 10.7554/Elife.44898.035  0.433
2018 Lin AY, Ding Y, Vanselow DJ, Katz SR, Yakovlev MA, Clark DP, Mandrell D, Copper JE, van Rossum DB, Cheng KC. Rigid Embedding of Fixed and Stained, Whole, Millimeter-Scale Specimens for Section-free 3D Histology by Micro-Computed Tomography. Journal of Visualized Experiments : Jove. PMID 30394379 DOI: 10.3791/58293  0.756
2017 Xin X, Clark D, Ang KC, van Rossum DB, Copper J, Xiao X, La Riviere PJ, Cheng KC. Synchrotron microCT imaging of soft tissue in juvenile zebrafish reveals retinotectal projections. Proceedings of Spie--the International Society For Optical Engineering. 10060. PMID 32733117 DOI: 10.1117/12.2267477  0.81
2017 Copper JE, Budgeon LR, Foutz CA, van Rossum DB, Vanselow DJ, Hubley MJ, Clark DP, Mandrell DT, Cheng KC. Comparative analysis of fixation and embedding techniques for optimized histological preparation of zebrafish. Comparative Biochemistry and Physiology. Toxicology & Pharmacology : Cbp. PMID 29157956 DOI: 10.1016/J.Cbpc.2017.11.003  0.449
2017 Cheng KC. 3D Virtual Histology and its Potential Contributions to Science Microscopy and Microanalysis. 23: 1314-1315. DOI: 10.1017/S1431927617007231  0.244
2016 Ding Y, Tavolara T, Cheng K. Automated Detection of Retinal Cell Nuclei in 3D Micro-CT Images of Zebrafish using Support Vector Machine Classification. Proceedings of Spie--the International Society For Optical Engineering. 9791. PMID 34548737 DOI: 10.1117/12.2216940  0.784
2016 Cheng KC, Katz SR, Lin AY, Xin X, Ding Y. Whole-Organism Cellular Pathology: A Systems Approach to Phenomics. Advances in Genetics. 95: 89-115. PMID 27503355 DOI: 10.1016/Bs.Adgen.2016.05.003  0.804
2016 Ding Y, Tavolara TE, Cheng K. Automated detection of retinal cell nuclei in 3D micro-CT images of zebrafish using support vector machine classification Proceedings of Spie. 9791: 7. DOI: 10.1117/12.2216940  0.509
2013 Canfield VA, Berg A, Peckins S, Wentzel SM, Ang KC, Oppenheimer S, Cheng KC. Molecular phylogeography of a human autosomal skin color locus under natural selection. G3 (Bethesda, Md.). 3: 2059-67. PMID 24048645 DOI: 10.1534/G3.113.007484  0.77
2012 Tsetskhladze ZR, Canfield VA, Ang KC, Wentzel SM, Reid KP, Berg AS, Johnson SL, Kawakami K, Cheng KC. Functional assessment of human coding mutations affecting skin pigmentation using zebrafish. Plos One. 7: e47398. PMID 23071798 DOI: 10.1371/Journal.Pone.0047398  0.778
2012 Ang KC, Ngu MS, Reid KP, Teh MS, Aida ZS, Koh DX, Berg A, Oppenheimer S, Salleh H, Clyde MM, Md-Zain BM, Canfield VA, Cheng KC. Skin color variation in Orang Asli tribes of Peninsular Malaysia. Plos One. 7: e42752. PMID 22912732 DOI: 10.1371/Journal.Pone.0042752  0.738
2012 Cheng KC, Hinton DE, Mattingly CJ, Planchart A. Aquatic models, genomics and chemical risk management. Comparative Biochemistry and Physiology. Toxicology & Pharmacology : Cbp. 155: 169-73. PMID 21763781 DOI: 10.1016/J.Cbpc.2011.06.009  0.436
2012 Ang KC, Ngu MS, Reid KP, Teh MS, Aida ZS, Koh DX, Berg A, Oppenheimer S, Salleh H, Clyde MM, Md-Zain BM, Canfield VA, Cheng KC. Correction: Skin Color Variation in Orang Asli Tribes of Peninsular Malaysia Plos One. 7. DOI: 10.1371/Annotation/Dfb89198-58Fe-49E5-Be23-325Be58Fedd0  0.346
2011 Wilson RT, Roff AN, Dai PJ, Fortugno T, Douds J, Chen G, Grove GL, Nikiforova SO, Barnholtz-Sloan J, Frudakis T, Chinchilli VM, Hartman TJ, Demers LM, Shriver MD, Canfield VA, ... Cheng KC, et al. Genetic Ancestry, Skin Reflectance and Pigmentation Genotypes in Association with Serum Vitamin D Metabolite Balance. Hormone Molecular Biology and Clinical Investigation. 7: 279-293. PMID 23525585 DOI: 10.1515/Hmbci.2011.021  0.384
2011 Cheng KC, Xin X, Clark DP, La Riviere P. Whole-animal imaging, gene function, and the Zebrafish Phenome Project. Current Opinion in Genetics & Development. 21: 620-9. PMID 21963132 DOI: 10.1016/J.Gde.2011.08.006  0.503
2011 Canada BA, Thomas GK, Cheng KC, Wang JZ. SHIRAZ: an automated histology image annotation system for zebrafish phenomics. Multimedia Tools and Applications. 51: 401-440. PMID 21461317 DOI: 10.1007/S11042-010-0638-4  0.72
2010 Valenzuela RK, Henderson MS, Walsh MH, Garrison NA, Kelch JT, Cohen-Barak O, Erickson DT, John Meaney F, Bruce Walsh J, Cheng KC, Ito S, Wakamatsu K, Frudakis T, Thomas M, Brilliant MH. Predicting phenotype from genotype: normal pigmentation. Journal of Forensic Sciences. 55: 315-22. PMID 20158590 DOI: 10.1111/J.1556-4029.2009.01317.X  0.341
2010 Rivière PJL, Clark D, Rojek A, Vargas P, Xiao X, DeCarlo F, Kindlmann G, Cheng K. Optimizing synchrotron microCT for high-throughput phenotyping of zebrafish Proceedings of Spie. 7804. DOI: 10.1117/12.860783  0.465
2009 Zinnanti WJ, Lazovic J, Griffin K, Skvorak KJ, Paul HS, Homanics GE, Bewley MC, Cheng KC, Lanoue KF, Flanagan JM. Dual mechanism of brain injury and novel treatment strategy in maple syrup urine disease. Brain : a Journal of Neurology. 132: 903-18. PMID 19293241 DOI: 10.1093/Brain/Awp024  0.762
2008 Cheng KC. Skin color in fish and humans: impacts on science and society. Zebrafish. 5: 237-42. PMID 19133821 DOI: 10.1089/Zeb.2008.0577  0.412
2008 Ekker SC, Parichy DM, Cheng KC. Research implications of pigment biology in zebrafish. Zebrafish. 5: 233-5. PMID 19133820 DOI: 10.1089/Zeb.2008.9981  0.446
2008 Cheng KC. Views on four key questions about zebrafish research. Zebrafish. 5: 9-24. PMID 18399790 DOI: 10.1089/Zeb.2008.9996  0.431
2007 Zinnanti WJ, Lazovic J, Housman C, LaNoue K, O'Callaghan JP, Simpson I, Woontner M, Goodman SI, Connor JR, Jacobs RE, Cheng KC. Mechanism of age-dependent susceptibility and novel treatment strategy in glutaric acidemia type I. The Journal of Clinical Investigation. 117: 3258-70. PMID 17932566 DOI: 10.1172/Jci31617  0.761
2007 Norton HL, Kittles RA, Parra E, McKeigue P, Mao X, Cheng K, Canfield VA, Bradley DG, McEvoy B, Shriver MD. Genetic evidence for the convergent evolution of light skin in Europeans and East Asians. Molecular Biology and Evolution. 24: 710-22. PMID 17182896 DOI: 10.1093/Molbev/Msl203  0.414
2006 Chi A, Valencia JC, Hu ZZ, Watabe H, Yamaguchi H, Mangini NJ, Huang H, Canfield VA, Cheng KC, Yang F, Abe R, Yamagishi S, Shabanowitz J, Hearing VJ, Wu C, et al. Proteomic and bioinformatic characterization of the biogenesis and function of melanosomes. Journal of Proteome Research. 5: 3135-44. PMID 17081065 DOI: 10.1021/Pr060363J  0.378
2006 Moore JL, Rush LM, Breneman C, Mohideen MA, Cheng KC. Zebrafish genomic instability mutants and cancer susceptibility. Genetics. 174: 585-600. PMID 16888336 DOI: 10.1534/Genetics.106.059386  0.401
2006 Zinnanti WJ, Lazovic J, Wolpert EB, Antonetti DA, Smith MB, Connor JR, Woontner M, Goodman SI, Cheng KC. New insights for glutaric aciduria type I. Brain : a Journal of Neurology. 129: e55. PMID 16870880 DOI: 10.1093/Brain/Awl138  0.764
2006 Sabaliauskas NA, Foutz CA, Mest JR, Budgeon LR, Sidor AT, Gershenson JA, Joshi SB, Cheng KC. High-throughput zebrafish histology. Methods (San Diego, Calif.). 39: 246-54. PMID 16870470 DOI: 10.1016/J.Ymeth.2006.03.001  0.377
2006 Blasiole B, Canfield VA, Vollrath MA, Huss D, Mohideen MA, Dickman JD, Cheng KC, Fekete DM, Levenson R. Separate Na,K-ATPase genes are required for otolith formation and semicircular canal development in zebrafish. Developmental Biology. 294: 148-60. PMID 16566913 DOI: 10.1016/J.Ydbio.2006.02.034  0.334
2006 Zinnanti WJ, Lazovic J, Wolpert EB, Antonetti DA, Smith MB, Connor JR, Woontner M, Goodman SI, Cheng KC. A diet-induced mouse model for glutaric aciduria type I. Brain : a Journal of Neurology. 129: 899-910. PMID 16446282 DOI: 10.1093/Brain/Awl009  0.763
2006 Cheng KC, Canfield VA. The role of SLC24A5 in skin color Experimental Dermatology. 15: 836-838. DOI: 10.1111/J.1600-0625.2006.00491.X  0.356
2005 Lamason RL, Mohideen MA, Mest JR, Wong AC, Norton HL, Aros MC, Jurynec MJ, Mao X, Humphreville VR, Humbert JE, Sinha S, Moore JL, Jagadeeswaran P, Zhao W, Ning G, ... ... Cheng KC, et al. SLC24A5, a putative cation exchanger, affects pigmentation in zebrafish and humans. Science (New York, N.Y.). 310: 1782-6. PMID 16357253 DOI: 10.1126/Science.1116238  0.412
2005 Croushore JA, Blasiole B, Riddle RC, Thisse C, Thisse B, Canfield VA, Robertson GP, Cheng KC, Levenson R. Ptena and ptenb genes play distinct roles in zebrafish embryogenesis. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 234: 911-21. PMID 16193492 DOI: 10.1002/Dvdy.20576  0.365
2004 Moore JL, Gestl EE, Cheng KC. Mosaic eyes, genomic instability mutants, and cancer susceptibility. Methods in Cell Biology. 76: 555-68. PMID 15602892 DOI: 10.1016/S0091-679X(04)76025-2  0.382
2004 Gerhard GS, Malek RL, Keller E, Murtha J, Cheng KC. Zebrafish, killifish, neither fish, both fish? The Journals of Gerontology. Series a, Biological Sciences and Medical Sciences. 59: B873-5. PMID 15472148 DOI: 10.1093/Gerona/59.9.B873  0.31
2003 Cheng KC, Levenson R, Robishaw JD. Functional genomic dissection of multimeric protein families in zebrafish. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 228: 555-67. PMID 14579392 DOI: 10.1002/Dvdy.10389  0.414
2003 Mohideen MA, Beckwith LG, Tsao-Wu GS, Moore JL, Wong AC, Chinoy MR, Cheng KC. Histology-based screen for zebrafish mutants with abnormal cell differentiation. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 228: 414-23. PMID 14579380 DOI: 10.1002/Dvdy.10407  0.404
2002 Gerhard GS, Cheng KC. A call to fins! Zebrafish as a gerontological model. Aging Cell. 1: 104-11. PMID 12882339 DOI: 10.1046/J.1474-9728.2002.00012.X  0.422
2002 Gerhard GS, Kauffman EJ, Wang X, Stewart R, Moore JL, Kasales CJ, Demidenko E, Cheng KC. Life spans and senescent phenotypes in two strains of Zebrafish (Danio rerio). Experimental Gerontology. 37: 1055-68. PMID 12213556 DOI: 10.1016/S0531-5565(02)00088-8  0.38
2002 Moore JL, Aros M, Steudel KG, Cheng KC. Fixation and decalcification of adult zebrafish for histological, immunocytochemical, and genotypic analysis. Biotechniques. 32: 296-8. PMID 11848405 DOI: 10.2144/02322St03  0.392
2001 Rajarao SJ, Canfield VA, Mohideen MA, Yan YL, Postlethwait JH, Cheng KC, Levenson R. The repertoire of Na,K-ATPase alpha and beta subunit genes expressed in the zebrafish, Danio rerio. Genome Research. 11: 1211-20. PMID 11435403 DOI: 10.1101/Gr.186001  0.332
2000 Mohideen MA, Moore JL, Cheng KC. Centromere-linked microsatellite markers for linkage groups 3, 4, 6, 7, 13, and 20 of zebrafish (Danio rerio). Genomics. 67: 102-6. PMID 10945477 DOI: 10.1006/Geno.2000.6233  0.378
2000 Beckwith LG, Moore JL, Tsao-Wu GS, Harshbarger JC, Cheng KC. Ethylnitrosourea induces neoplasia in zebrafish (Danio rerio). Laboratory Investigation; a Journal of Technical Methods and Pathology. 80: 379-85. PMID 10744073 DOI: 10.1038/Labinvest.3780042  0.387
1998 Tsao-Wu GS, Weber CH, Budgeon LR, Cheng KC. Agarose-embedded tissue arrays for histologic and genetic analysis. Biotechniques. 25: 614-8. PMID 9793642 DOI: 10.2144/98254St02  0.441
1997 Cheng KC, Loeb LA. Genomic stability and instability: A working paradigm Current Topics in Microbiology and Immunology. 221: 5-18. PMID 8979437 DOI: 10.1007/978-3-642-60505-5_2  0.541
1997 Cheng KC, Moore JL. Genetic dissection of vertebrate processes in the zebrafish: a comparison of uniparental and two-generation screens Biochemistry and Cell Biology. 75: 525-533. DOI: 10.1139/O97-087  0.405
1997 Gestl EE, Kauffman EJ, Moore JL, Cheng KC. New conditions for generation of gynogenetic half-tetrad embryos in the zebrafish (Danio rerio) Journal of Heredity. 88: 76-79. DOI: 10.1093/Oxfordjournals.Jhered.A023063  0.332
1996 Hite JM, Eckert KA, Cheng KC. Factors affecting fidelity of DNA synthesis during PCR amplification of d(C-A)n·d(G-T)n microsatellite repeats Nucleic Acids Research. 24: 2429-2434. PMID 8710517 DOI: 10.1093/Nar/24.12.2429  0.344
1993 Cheng KC, Loeb LA. Genomic instability and tumor progression: mechanistic considerations. Advances in Cancer Research. 60: 121-56. PMID 8417498 DOI: 10.1016/S0065-230X(08)60824-6  0.537
1991 Cheng KC, Preston BD, Cahill DS, Dosanjh MK, Singer B, Loeb LA. The vinyl chloride DNA derivative N2,3-ethenoguanine produces G → A transitions in Escherichia coli Proceedings of the National Academy of Sciences of the United States of America. 88: 9974-9978. PMID 1946466 DOI: 10.1073/Pnas.88.22.9974  0.513
1990 Loeb LA, Cheng KC. Errors in DNA synthesis: a source of spontaneous mutations. Mutation Research. 238: 297-304. PMID 2188126 DOI: 10.1016/0165-1110(90)90021-3  0.53
1987 Cheng KC, Smith GR. Cutting of chi-like sequences by the RecBCD enzyme of Escherichia coli. Journal of Molecular Biology. 194: 747-50. PMID 2958631 DOI: 10.1016/0022-2836(87)90252-X  0.523
1986 Smith GL, Cheng KC, Moss B. Vaccinia virus: an expression vector for genes from parasites. Parasitology. S109-17. PMID 3520448 DOI: 10.1017/S0031182000085723  0.185
1985 Cheng KC, Smith GR. Recombinational hotspot activity of Chi-like sequences. Journal of Molecular Biology. 180: 371-7. PMID 6239928 DOI: 10.1016/S0022-2836(84)80009-1  0.517
1984 Smith GR, Amundsen SK, Chaudhury AM, Cheng KC, Ponticelli AS, Roberts CM, Schultz DW, Taylor AF. Roles of RecBC enzyme and chi sites in homologous recombination. Cold Spring Harbor Symposia On Quantitative Biology. 49: 485-95. PMID 6397303 DOI: 10.1101/Sqb.1984.049.01.055  0.731
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