Jon-Paul Bingham - Related publications

University of Hawai'i at Manoa, Honolulu, HI 
Biochemistry, Molecular Biology, Neuroscience Biology
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 Song H, Naismith JH. Enzymatic methylation of the amide bond. Current Opinion in Structural Biology. 65: 79-88. PMID 32653730 DOI: 10.1016/   
2020 Wang X, Yu H, Xing R, Liu S, Chen X, Li P. Optimization of Oyster () Protein Hydrolysates Using Response Surface Methodology. Molecules (Basel, Switzerland). 25. PMID 32575614 DOI: 10.3390/molecules25122844   
2020 Bueno-Gavilá E, Abellán A, Bermejo MS, Salazar E, Cayuela JM, Prieto-Merino D, Tejada L. Characterization of Proteolytic Activity of Artichoke ( L.) Flower Extracts on Bovine Casein to Obtain Bioactive Peptides. Animals : An Open Access Journal From Mdpi. 10. PMID 32466272 DOI: 10.3390/ani10050914   
2020 Yu J, Wu J, Xie D, Du L, Tang YJ, Xie J, Wei D. Characterization and rational design for substrate specificity of a prolyl endopeptidase from Stenotrophomonas maltophilia. Enzyme and Microbial Technology. 138: 109548. PMID 32527522 DOI: 10.1016/j.enzmictec.2020.109548   
2020 Wang S, Zeng P, Zhu X, Lei C, Huang Y, Nie Z. Chimeric Peptides Self-assembling on Titanium Carbide MXenes as Biosensing Interfaces for Activity Assay of Post-translational Modification Enzymes. Analytical Chemistry. PMID 32468809 DOI: 10.1021/acs.analchem.0c00243   
2020 Sikandar A, Franz L, Adam S, Santos-Aberturas J, Horbal L, Luzhetskyy A, Truman AW, Kalinina OV, Koehnke J. The bottromycin epimerase BotH defines a group of atypical α/β-hydrolase-fold enzymes. Nature Chemical Biology. PMID 32601484 DOI: 10.1038/s41589-020-0569-y   
2020 Bösch NM, Borsa M, Greczmiel U, Morinaka BI, Gugger M, Oxenius A, Vagstad AL, Piel J. Landornamides: Antiviral Ornithine-Containing Ribosomal Peptides Discovered through Genome Mining. Angewandte Chemie (International Ed. in English). PMID 32163654 DOI: 10.1002/anie.201916321   
2020 Razai AS, Snipas SJ, Poreba M, Fasci D, Salvesen GS. Engineering Caspase 7 as an Affinity Reagent to Capture Proteolytic Products. The Febs Journal. PMID 32619291 DOI: 10.1111/febs.15467   
2020 Zuo SS, Wang YC, Zhu L, Zhao JY, Li MG, Han XL, Wen ML. Cloning and Characterization of a Ginsenoside-Hydrolyzing α-L-Arabinofuranosidase, CaAraf51, From Cellulosimicrobium aquatile Lyp51. Current Microbiology. PMID 32535650 DOI: 10.1007/s00284-020-02078-0   
2020 Zhou K, Wang H, Zhu X, Zheng A, Li N, Sun X, Gao D, An P, Wang J, Qian G, Wang Q. [Enhancing thermostability of xylanase from rumen microbiota by molecular cyclization]. Sheng Wu Gong Cheng Xue Bao = Chinese Journal of Biotechnology. 36: 920-931. PMID 32567275 DOI: 10.13345/j.cjb.190341   
2020 Tholen M, Yim JJ, Groborz K, Yoo E, Martin BA, van den Berg NS, Drag M, Bogyo M. Design of optical imaging probes by screening of diverse substrate libraries directly in disease tissue extracts. Angewandte Chemie (International Ed. in English). PMID 32589815 DOI: 10.1002/anie.202006719   
2020 Wang T, Jiang Y, Chen X, Wang L, Ma C, Xi X, Zhang Y, Chen T, Shaw C, Zhou M. Ranacyclin-NF, a Novel Bowman-Birk Type Protease Inhibitor from the Skin Secretion of the East Asian Frog, . Biology. 9. PMID 32630758 DOI: 10.3390/biology9070149   
2020 Hu X, Bai Y, Fan TP, Zheng X, Cai Y. A novel type alanine dehydrogenase from Helicobacter aurati: Molecular characterization and application. International Journal of Biological Macromolecules. PMID 32534087 DOI: 10.1016/j.ijbiomac.2020.06.067   
2020 Hartman K, Mielczarek P, Smoluch M, Silberring J. Inhibitors of neuropeptide peptidases engaged in pain and drug dependence. Neuropharmacology. 108137. PMID 32526240 DOI: 10.1016/j.neuropharm.2020.108137   
2020 Song P, Cheng L, Tian K, Zhang M, Mchunu NP, Niu D, Singh S, Prior B, Wang ZX. Biochemical characterization of two new aspartic proteases. 3 Biotech. 10: 303. PMID 32566441 DOI: 10.1007/s13205-020-02292-4   
2020 Han X, Ning W, Ma X, Wang X, Zhou K. Improving protein solubility and activity by introducing small peptide tags designed with machine learning models. Metabolic Engineering Communications. 11: e00138. PMID 32642423 DOI: 10.1016/j.mec.2020.e00138   
2020 Ali M, Khan KM, Mahdavi M, Jabbar A, Shamim S, Salar U, Taha M, Perveen S, Larijani B, Faramarzi MA. Synthesis, in vitro and in silico screening of 2-amino-4-aryl-6-(phenylthio) pyridine-3,5-dicarbonitriles as novel α-glucosidase inhibitors. Bioorganic Chemistry. 100: 103879. PMID 32413625 DOI: 10.1016/j.bioorg.2020.103879   
2020 Okuma R, Kuwahara T, Yoshikane T, Watanabe M, Dranchak P, Inglese J, Shuto S, Goto Y, Suga H. A macrocyclic peptide library with a structurally constrained cyclopropane-containing building block leads to thiol-independent inhibitors of phosphoglycerate mutase. Chemistry, An Asian Journal. PMID 32633882 DOI: 10.1002/asia.202000700   
2020 Shi C, Miller BR, Alexander EM, Gulick AM, Aldrich CC. Design, Synthesis and Biophysical Evaluation of Mechanism-Based Probes for Condensation Domains of Nonribosomal Peptide Synthetases. Acs Chemical Biology. PMID 32568518 DOI: 10.1021/acschembio.0c00411   
2020 Ishikawa F, Nohara M, Takashima K, Tanabe G. Probing the compatibility of an enzyme-linked immunosorbent assay toward the reprogramming of nonribosomal peptide synthetase adenylation domains. Chembiochem : a European Journal of Chemical Biology. PMID 32533653 DOI: 10.1002/cbic.202000206   
2020 Adak T, Morales DL, Cook AJ, Grigg JC, Murphy MEP, Tanner ME. ArnD is a deformylase involved in polymyxin resistance. Chemical Communications (Cambridge, England). PMID 32432293 DOI: 10.1039/d0cc02241a   
2020 Caselli E, Fini F, Introvigne ML, Stucchii M, Taracila MA, Fish E, Smolen K, Rather PN, Powers RA, Wallar BJ, Bonomo RA, Prati F. 1,2,3-Triazolylmethaneboronate: a Structure Activity Relationship Study of a New Class of β-Lactamase Inhibitors against Acinetobacter baumannii Cephalosporinase (ADC-7). Acs Infectious Diseases. PMID 32502340 DOI: 10.1021/acsinfecdis.0c00254   
2020 Kronenberger T, Ferreira GM, de Souza ADF, da Silva Santos S, Poso A, Ribeiro JA, Tavares MT, Pavan FR, Trossini GHG, Dias MVB, Parise-Filho R. Design, synthesis and biological activity of novel substituted 3-benzoic acid derivatives as MtDHFR inhibitors. Bioorganic & Medicinal Chemistry. 28: 115600. PMID 32631571 DOI: 10.1016/j.bmc.2020.115600   
2020 Xu J, Zhang T, Yao J, Lu J, Liu Z, Ding L. Recent advances in chemistry and bioactivity of marine cyanobacteria Moorea species. European Journal of Medicinal Chemistry. 201: 112473. PMID 32652435 DOI: 10.1016/j.ejmech.2020.112473   
2020 Patarroyo-Vargas AM, Cordeiro G, Silva CRD, Silva CRD, Mendonça EG, Visôtto LE, Zanuncio JC, Campos WG, Oliveira MGA. Inhibition kinetics of digestive proteases for Anticarsia gemmatalis. Anais Da Academia Brasileira De Ciencias. 92: e20180477. PMID 32491140 DOI: 10.1590/0001-3765202020180477   
2020 Woo HS, Shin KC, Kim JY, Kim YS, Ban YJ, Oh YJ, Cho HJ, Oh DK, Kim DW. Bakkenolides and Caffeoylquinic Acids from the Aerial Portion of and Their Bacterial Neuraminidase Inhibition Ability. Biomolecules. 10. PMID 32532086 DOI: 10.3390/biom10060888   
2020 Kung PP, Bingham P, Burke BJ, Chen Q, Cheng X, Deng YL, Dou D, Feng J, Gallego GM, Gehring MR, Grant SK, Greasley S, Harris AR, Maegley KA, Meier J, et al. Characterization of Specific -α-Acetyltransferase 50 (Naa50) Inhibitors Identified Using a DNA Encoded Library. Acs Medicinal Chemistry Letters. 11: 1175-1184. PMID 32550998 DOI: 10.1021/acsmedchemlett.0c00029   
2020 Gütschow M, Küppers J, Benkel T, Annala S, Kimura K, Reinelt L, Fleischmann BK, Kostenis E. Tetrahydroimidazo[1,2-a]pyrazine Derivatives: Synthesis and Evaluation As Gαq-Protein Ligands. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 32428383 DOI: 10.1002/chem.202001446   
2020 Yang J, Xiao YZ, Li R, Liu Y, Long LJ. Repurposing a bacterial prolidase for organophosphorus hydrolysis: reshaped catalytic cavity switches substrate selectivity. Biotechnology and Bioengineering. PMID 32515491 DOI: 10.1002/bit.27455   
2020 Ju Z, Wang SY. Prediction of 2-hydroxyisobutyrylation sites by integrating multiple sequence features with ensemble support vector machine. Computational Biology and Chemistry. 87: 107280. PMID 32505881 DOI: 10.1016/j.compbiolchem.2020.107280   
2020 Işık M, Akocak S, Lolak N, Taslimi P, Türkeş C, Gülçin İ, Durgun M, Beydemir Ş. Synthesis, characterization, biological evaluation, and in silico studies of novel 1,3-diaryltriazene-substituted sulfathiazole derivatives. Archiv Der Pharmazie. e2000102. PMID 32529657 DOI: 10.1002/ardp.202000102   
2020 Choe H, Cha M, Stewart JD. Semi-rational approach to expand the Acyl-CoA Chain length tolerance of Sphingomonas paucimobilis serine palmitoyltransferase. Enzyme and Microbial Technology. 137: 109515. PMID 32423667 DOI: 10.1016/j.enzmictec.2020.109515   
2020 Braun NJ, Quek JP, Huber S, Kouretova J, Rogge D, Lang-Henkel H, Cheong ZKE, Chew BLA, Heine A, Luo D, Steinmetzer T. Structure-based macrocyclization of substrate analog NS2B-NS3 protease inhibitors of Zika, West Nile and Dengue viruses. Chemmedchem. PMID 32501637 DOI: 10.1002/cmdc.202000237   
2020 Mulder T, Bobba S, Johnson K, Grandner JM, Wang W, Zhang C, Cai J, Choo EF, Khojasteh SC, Zhang D. . Drug Metabolism and Disposition: the Biological Fate of Chemicals. PMID 32616543 DOI: 10.1124/dmd.120.000096   
2020 Bhatt HB, Singh SP. Cloning, Expression, and Structural Elucidation of a Biotechnologically Potential Alkaline Serine Protease From a Newly Isolated Haloalkaliphilic JO-26. Frontiers in Microbiology. 11: 941. PMID 32582046 DOI: 10.3389/fmicb.2020.00941   
2020 Muddala NP, White JC, Nammalwar B, Pratt I, Thomas LM, Bunce RA, Berlin KD, Bourne CR. Inhibitor design to target a unique feature in the folate pocket of Staphylococcus aureus dihydrofolate reductase. European Journal of Medicinal Chemistry. 200: 112412. PMID 32502861 DOI: 10.1016/j.ejmech.2020.112412   
2020 Mamiya A, Sakka M, Kosugi A, Katsuzaki H, Tanaka A, Kunitake E, Kimura T, Sakka K. Significance of a family-6 carbohydrate-binding module in a modular feruloyl esterase for removing ferulic acid from insoluble wheat arabinoxylan. Enzyme and Microbial Technology. 138: 109546. PMID 32527521 DOI: 10.1016/j.enzmictec.2020.109546   
2020 Meriño-Cabrera Y, de Oliveira Mendes TA, Castro JGS, Barbosa SL, Macedo MLR, de Almeida Oliveira MG. Noncompetitive tight-binding inhibition of Anticarsia gemmatalis trypsins by Adenanthera pavonina protease inhibitor affects larvae survival. Archives of Insect Biochemistry and Physiology. e21687. PMID 32342573 DOI: 10.1002/arch.21687   
2020 Taha M, Uddin N, Ali M, Anouar EH, Rahim F, Khan G, Farooq RK, Gollapalli M, Iqbal N, Farooq M, Khan KM. Inhibition potential of phenyl linked benzimidazole-triazolothiadiazole modular hybrids against β-glucuronidase and their interactions thereof. International Journal of Biological Macromolecules. PMID 32512086 DOI: 10.1016/j.ijbiomac.2020.06.006   
2020 Li XN, Hua LX, Zhou TS, Wang KB, Wu YY, Emam M, Bao XZ, Chen J, Wei B. Cinnamic acid derivatives: inhibitory activity against -glucuronidase and structure-activity relationships. Journal of Enzyme Inhibition and Medicinal Chemistry. 35: 1372-1378. PMID 32571102 DOI: 10.1080/14756366.2020.1780225   
2020 Siddiqui I, Husain Q, Azam A. Exploring the antioxidant effects of peptides from almond proteins using PAni-Ag-GONC conjugated trypsin by improving enzyme stability & applications. International Journal of Biological Macromolecules. 158: 150-158. PMID 32344094 DOI: 10.1016/j.ijbiomac.2020.04.188   
2020 Mäder P, Bartholomäus R, Nicolussi S, Baumann A, Weis M, Chicca A, Rau M, Simão AC, Gertsch J, Altmann KH. Synthesis and Biological Evaluation of Endocannabinoid Uptake Inhibitors Derived from WOBE437. Chemmedchem. PMID 32369259 DOI: 10.1002/cmdc.202000153   
2020 Dunaevsky YE, Tereshchenkova VF, Oppert B, Belozersky MA, Filippova IY, Elpidina EN. Human proline specific peptidases: A comprehensive analysis. Biochimica Et Biophysica Acta. General Subjects. 129636. PMID 32433934 DOI: 10.1016/j.bbagen.2020.129636   
2020 Gmelch TJ, Sperl JM, Sieber V. Molecular Dynamics Analysis of a Rationally Designed Aldehyde Dehydrogenase Gives Insights into Improved Activity for the Non-Native Cofactor NAD Acs Synthetic Biology. 9: 920-929. PMID 32208678 DOI: 10.1021/acssynbio.9b00527   
2020 Coelho ALS, Orlandelli RC. Immobilized microbial lipases in the food industry: a systematic literature review. Critical Reviews in Food Science and Nutrition. 1-15. PMID 32423294 DOI: 10.1080/10408398.2020.1764489   
2020 Cheng M, Zhu Y, Chen Z, Guang C, Zhang W, Mu W. Biochemical characterization of a novel thermostable DFA I-forming inulin fructotransferases from Streptomyces peucetius subsp. caesius ATCC 27952. Enzyme and Microbial Technology. 137: 109519. PMID 32423668 DOI: 10.1016/j.enzmictec.2020.109519   
2020 Tao M, Xu M, Zhang F, Cheng Z, Bashiri G, Wang J, Hong J, Wang Y, Xu L, Chen X, Huang SX, Lin S, Deng Z. Functional genome mining reveals a novel class V lanthipeptide containing a D-amino acid introduced by an F420H2-dependent reductase. Angewandte Chemie (International Ed. in English). PMID 32648341 DOI: 10.1002/anie.202008035   
2020 Zhang Y, Zhang N, Wang Q, Wang P, Yu Y. A facile and eco-friendly approach for preparation of microkeratin and nanokeratin by ultrasound-assisted enzymatic hydrolysis. Ultrasonics Sonochemistry. 68: 105201. PMID 32521486 DOI: 10.1016/j.ultsonch.2020.105201   
2020 Liu X, Zhao J, Zhang Y, Ubarretxena-Belandia I, Forth S, Lieberman RL, Wang C. Substrate-Enzyme Interactions in Intramembrane Proteolysis: γ-Secretase as the Prototype. Frontiers in Molecular Neuroscience. 13: 65. PMID 32508589 DOI: 10.3389/fnmol.2020.00065   
2020 Krátký M, Baranyai Z, Štěpánková Š, Svrčková K, Švarcová M, Stolaříková J, Horváth L, Bősze S, Vinšová J. -Alkyl-2-[4-(trifluoromethyl)benzoyl]hydrazine-1-carboxamides and Their Analogues: Synthesis and Multitarget Biological Activity. Molecules (Basel, Switzerland). 25. PMID 32408517 DOI: 10.3390/molecules25102268