| Year |
Citation |
Score |
| 2024 |
Andrews JP, Geng J, Voitiuk K, Elliott MAT, Shin D, Robbins A, Spaeth A, Wang A, Li L, Solis D, Keefe MG, Sevetson JL, Rivera de Jesús JA, Donohue KC, Larson HH, ... ... Nowakowski TJ, et al. Multimodal evaluation of network activity and optogenetic interventions in human hippocampal slices. Nature Neuroscience. PMID 39548326 DOI: 10.1038/s41593-024-01782-5 |
0.643 |
|
| 2024 |
Yu D, Jain S, Wangzhou A, De Florencio S, Zhu B, Kim JY, Choi JJ, Paredes MF, Nowakowski TJ, Huang EJ, Piao X. Microglia regulate GABAergic neurogenesis in prenatal human brain through IGF1. Biorxiv : the Preprint Server For Biology. PMID 39464051 DOI: 10.1101/2024.10.19.619180 |
0.38 |
|
| 2024 |
Zhu B, Wangzhou A, Yu D, Li T, Schmidt R, De Florencio SL, Chao L, Perez Y, Grinberg LT, Spina S, Ransohoff RM, Kriegstein AR, Seeley WW, Nowakowski T, Piao X. Adhesion G protein-coupled receptor ADGRG1 promotes protective microglial response in Alzheimer's disease. Biorxiv : the Preprint Server For Biology. PMID 39464012 DOI: 10.1101/2024.10.15.618329 |
0.494 |
|
| 2024 |
Heffel MG, Zhou J, Zhang Y, Lee DS, Hou K, Pastor-Alonso O, Abuhanna KD, Galasso J, Kern C, Tai CY, Garcia-Padilla C, Nafisi M, Zhou Y, Schmitt AD, Li T, ... ... Nowakowski TJ, et al. Temporally distinct 3D multi-omic dynamics in the developing human brain. Nature. PMID 39385032 DOI: 10.1038/s41586-024-08030-7 |
0.346 |
|
| 2024 |
Furlanis E, Dai M, Leyva Garcia B, Vergara J, Pereira A, Pelkey K, Tran T, Gorissen BL, Vlachos A, Hairston A, Huang S, Dwivedi D, Du S, Wills S, McMahon J, ... ... Nowakowski TJ, et al. An enhancer-AAV toolbox to target and manipulate distinct interneuron subtypes. Biorxiv : the Preprint Server For Biology. PMID 39091835 DOI: 10.1101/2024.07.17.603924 |
0.463 |
|
| 2024 |
Lee AT, Chang EF, Paredes MF, Nowakowski TJ. Large-scale neurophysiology and single-cell profiling in human neuroscience. Nature. 630: 587-595. PMID 38898291 DOI: 10.1038/s41586-024-07405-0 |
0.544 |
|
| 2024 |
Deng C, Whalen S, Steyert M, Ziffra R, Przytycki PF, Inoue F, Pereira DA, Capauto D, Norton S, Vaccarino FM, Pollen AA, Nowakowski TJ, Ahituv N, Pollard KS. Massively parallel characterization of regulatory elements in the developing human cortex. Science (New York, N.Y.). 384: eadh0559. PMID 38781390 DOI: 10.1126/science.adh0559 |
0.827 |
|
| 2024 |
Shin D, Kim CN, Ross J, Hennick KM, Wu SR, Paranjape N, Leonard R, Wang JC, Keefe MG, Pavlovic BJ, Donohue KC, Moreau C, Wigdor EM, Larson HH, Allen DE, ... ... Nowakowski TJ, et al. Thalamocortical organoids enable in vitro modeling of 22q11.2 microdeletion associated with neuropsychiatric disorders. Cell Stem Cell. PMID 38382530 DOI: 10.1016/j.stem.2024.01.010 |
0.782 |
|
| 2024 |
Zhu D, Brookes DH, Busia A, Carneiro A, Fannjiang C, Popova G, Shin D, Donohue KC, Lin LF, Miller ZM, Williams ER, Chang EF, Nowakowski TJ, Listgarten J, Schaffer DV. Optimal trade-off control in machine learning-based library design, with application to adeno-associated virus (AAV) for gene therapy. Science Advances. 10: eadj3786. PMID 38266077 DOI: 10.1126/sciadv.adj3786 |
0.782 |
|
| 2024 |
Steyert M, Nowakowski T. Improving cellular diversity in human cerebellar organoids. Cell Stem Cell. 31: 3-4. PMID 38181748 DOI: 10.1016/j.stem.2023.12.007 |
0.817 |
|
| 2023 |
Velmeshev D, Perez Y, Yan Z, Valencia JE, Castaneda-Castellanos DR, Wang L, Schirmer L, Mayer S, Wick B, Wang S, Nowakowski TJ, Paredes M, Huang EJ, Kriegstein AR. Single-cell analysis of prenatal and postnatal human cortical development. Science (New York, N.Y.). 382: eadf0834. PMID 37824647 DOI: 10.1126/science.adf0834 |
0.829 |
|
| 2023 |
Kim CN, Shin D, Wang A, Nowakowski TJ. Spatiotemporal molecular dynamics of the developing human thalamus. Science (New York, N.Y.). 382: eadf9941. PMID 37824646 DOI: 10.1126/science.adf9941 |
0.758 |
|
| 2023 |
Kim CN, Shin D, Wang A, Nowakowski TJ. Spatiotemporal molecular dynamics of the developing human thalamus. Biorxiv : the Preprint Server For Biology. PMID 37662287 DOI: 10.1101/2023.08.21.554174 |
0.759 |
|
| 2023 |
Popova G, Retallack H, Kim CN, Wang A, Shin D, DeRisi JL, Nowakowski T. Rubella virus tropism and single-cell responses in human primary tissue and microglia-containing organoids. Elife. 12. PMID 37470786 DOI: 10.7554/eLife.87696 |
0.804 |
|
| 2023 |
Keough KC, Whalen S, Inoue F, Przytycki PF, Fair T, Deng C, Steyert M, Ryu H, Lindblad-Toh K, Karlsson E, Nowakowski T, Ahituv N, Pollen A, Pollard KS, Andrews G, et al. Three-dimensional genome rewiring in loci with human accelerated regions. Science (New York, N.Y.). 380: eabm1696. PMID 37104607 DOI: 10.1126/science.abm1696 |
0.795 |
|
| 2023 |
Deng C, Whalen S, Steyert M, Ziffra R, Przytycki PF, Inoue F, Pereira DA, Capauto D, Norton S, Vaccarino FM, Pollen A, Nowakowski TJ, Ahituv N, Pollard KS. Massively parallel characterization of psychiatric disorder-associated and cell-type-specific regulatory elements in the developing human cortex. Biorxiv : the Preprint Server For Biology. PMID 36824845 DOI: 10.1101/2023.02.15.528663 |
0.826 |
|
| 2022 |
Steyert M, Nowakowski TJ. In preprints: new insights into truncated radial glia. Development (Cambridge, England). 149. PMID 36382646 DOI: 10.1242/dev.201374 |
0.749 |
|
| 2022 |
Wang T, Kim CN, Bakken TE, Gillentine MA, Henning B, Mao Y, Gilissen C, Nowakowski TJ, Eichler EE. Integrated gene analyses of de novo variants from 46,612 trios with autism and developmental disorders. Proceedings of the National Academy of Sciences of the United States of America. 119: e2203491119. PMID 36350923 DOI: 10.1073/pnas.2203491119 |
0.638 |
|
| 2022 |
Nowakowski TJ, Salama SR. Cerebral Organoids as an Experimental Platform for Human Neurogenomics. Cells. 11. PMID 36139380 DOI: 10.3390/cells11182803 |
0.366 |
|
| 2022 |
Andrews MG, Mukhtar T, Eze UC, Simoneau CR, Ross J, Parikshak N, Wang S, Zhou L, Koontz M, Velmeshev D, Siebert CV, Gemenes KM, Tabata T, Perez Y, Wang L, ... ... Nowakowski TJ, et al. Tropism of SARS-CoV-2 for human cortical astrocytes. Proceedings of the National Academy of Sciences of the United States of America. 119: e2122236119. PMID 35858406 DOI: 10.1073/pnas.2122236119 |
0.788 |
|
| 2022 |
Arlotta P, Chen F, Lodato S, Margrie TW, Nowakowski TJ, Pederson T, Rico B. Dissecting cellular diversity of cortical GABAergic cells across multiple modalities: A turning point in neuronal taxonomy. Faculty Reviews. 11: 13. PMID 35719130 DOI: 10.12703/r-01-000009 |
0.313 |
|
| 2022 |
Allen DE, Donohue KC, Cadwell CR, Shin D, Keefe MG, Sohal VS, Nowakowski TJ. Fate mapping of neural stem cell niches reveals distinct origins of human cortical astrocytes. Science (New York, N.Y.). eabm5224. PMID 35587512 DOI: 10.1126/science.abm5224 |
0.808 |
|
| 2022 |
Yu D, Li T, Delpech JC, Zhu B, Kishore P, Koshi T, Luo R, Pratt KJB, Popova G, Nowakowski TJ, Villeda SA, Piao X. Microglial GPR56 is the molecular target of maternal immune activation-induced parvalbumin-positive interneuron deficits. Science Advances. 8: eabm2545. PMID 35544642 DOI: 10.1126/sciadv.abm2545 |
0.767 |
|
| 2022 |
Schmitz MT, Sandoval K, Chen CP, Mostajo-Radji MA, Seeley WW, Nowakowski TJ, Ye CJ, Paredes MF, Pollen AA. The development and evolution of inhibitory neurons in primate cerebrum. Nature. 603: 871-877. PMID 35322231 DOI: 10.1038/s41586-022-04510-w |
0.358 |
|
| 2022 |
Dorman LC, Nguyen PT, Escoubas CC, Vainchtein ID, Xiao Y, Lidsky PV, Nakajo H, Silva NJ, Lagares-Linares C, Wang EY, Taloma SE, Cuevas B, Nakao-Inoue H, Rivera BM, Schwer B, ... ... Nowakowski TJ, et al. A type I interferon response defines a conserved microglial state required for effective neuronal phagocytosis. Biorxiv : the Preprint Server For Biology. PMID 35233577 DOI: 10.1101/2021.04.29.441889 |
0.313 |
|
| 2022 |
Winkler EA, Wu D, Gil E, McCoy D, Narsinh K, Sun Z, Mueller K, Ross J, Kim H, Weinsheimer S, Berger M, Nowakowski T, Lim D, Abla A, Cooke D. Endoluminal Biopsy for Molecular Profiling of Human Brain Vascular Malformations. Neurology. PMID 35145012 DOI: 10.1212/WNL.0000000000200109 |
0.662 |
|
| 2022 |
Wu Z, Chhun BB, Popova G, Guo SM, Kim CN, Yeh LH, Nowakowski T, Zou J, Mehta SB. DynaMorph: self-supervised learning of morphodynamic states of live cells. Molecular Biology of the Cell. mbcE21110561. PMID 35138913 DOI: 10.1091/mbc.E21-11-0561 |
0.797 |
|
| 2022 |
Paredes MF, Mora C, Flores-Ramirez Q, Cebrian-Silla A, Del Dosso A, Larimer P, Chen J, Kang G, Gonzalez Granero S, Garcia E, Chu J, Delgado R, Cotter JA, Tang V, Spatazza J, ... ... Nowakowski TJ, et al. Nests of dividing neuroblasts sustain interneuron production for the developing human brain. Science (New York, N.Y.). 375: eabk2346. PMID 35084970 DOI: 10.1126/science.abk2346 |
0.82 |
|
| 2022 |
Winkler EA, Kim CN, Ross JM, Garcia JH, Gil E, Oh I, Chen LQ, Wu D, Catapano JS, Raygor K, Narsinh K, Kim H, Weinsheimer S, Cooke DL, Walcott BP, ... ... Nowakowski TJ, et al. A single-cell atlas of the normal and malformed human brain vasculature. Science (New York, N.Y.). eabi7377. PMID 35084939 DOI: 10.1126/science.abi7377 |
0.794 |
|
| 2021 |
Bandler RC, Vitali I, Delgado RN, Ho MC, Dvoretskova E, Ibarra Molinas JS, Frazel PW, Mohammadkhani M, Machold R, Maedler S, Liddelow SA, Nowakowski TJ, Fishell G, Mayer C. Single-cell delineation of lineage and genetic identity in the mouse brain. Nature. PMID 34912118 DOI: 10.1038/s41586-021-04237-0 |
0.795 |
|
| 2021 |
Delgado RN, Allen DE, Keefe MG, Mancia Leon WR, Ziffra RS, Crouch EE, Alvarez-Buylla A, Nowakowski TJ. Individual human cortical progenitors can produce excitatory and inhibitory neurons. Nature. PMID 34912114 DOI: 10.1038/s41586-021-04230-7 |
0.767 |
|
| 2021 |
Narsinh KH, Narsinh K, McCoy DB, Sun Z, Halabi C, Meisel K, Tihan T, Chaganti K, Amans MR, Halbach VV, Higashida RT, Hetts SW, Dowd CF, Winkler EA, Abla AA, ... Nowakowski TJ, et al. Endovascular Biopsy of Vertebrobasilar Aneurysm in Patient With Polyarteritis Nodosa. Frontiers in Neurology. 12: 697105. PMID 34887823 DOI: 10.3389/fneur.2021.697105 |
0.522 |
|
| 2021 |
Bhaduri A, Sandoval-Espinosa C, Otero-Garcia M, Oh I, Yin R, Eze UC, Nowakowski TJ, Kriegstein AR. An atlas of cortical arealization identifies dynamic molecular signatures. Nature. 598: 200-204. PMID 34616070 DOI: 10.1038/s41586-021-03910-8 |
0.617 |
|
| 2021 |
Ziffra RS, Kim CN, Ross JM, Wilfert A, Turner TN, Haeussler M, Casella AM, Przytycki PF, Keough KC, Shin D, Bogdanoff D, Kreimer A, Pollard KS, Ament SA, Eichler EE, ... ... Nowakowski TJ, et al. Single-cell epigenomics reveals mechanisms of human cortical development. Nature. 598: 205-213. PMID 34616060 DOI: 10.1038/s41586-021-03209-8 |
0.8 |
|
| 2021 |
Popova G, Soliman SS, Kim CN, Keefe MG, Hennick KM, Jain S, Li T, Tejera D, Shin D, Chhun BB, McGinnis CS, Speir M, Gartner ZJ, Mehta SB, Haeussler M, ... ... Nowakowski TJ, et al. Human microglia states are conserved across experimental models and regulate neural stem cell responses in chimeric organoids. Cell Stem Cell. PMID 34536354 DOI: 10.1016/j.stem.2021.08.015 |
0.821 |
|
| 2021 |
Ahanger SH, Delgado RN, Gil E, Cole MA, Zhao J, Hong SJ, Kriegstein AR, Nowakowski TJ, Pollen AA, Lim DA. Distinct nuclear compartment-associated genome architecture in the developing mammalian brain. Nature Neuroscience. PMID 34239128 DOI: 10.1038/s41593-021-00879-5 |
0.814 |
|
| 2021 |
Coll-Tané M, Gong NN, Belfer SJ, van Renssen LV, Kurtz-Nelson EC, Szuperak M, Eidhof I, van Reijmersdal B, Terwindt I, Durkin J, Verheij MMM, Kim CN, Hudac CM, Nowakowski TJ, Bernier RA, et al. The CHD8/CHD7/Kismet family links blood-brain barrier glia and serotonin to ASD-associated sleep defects. Science Advances. 7. PMID 34088660 DOI: 10.1126/sciadv.abe2626 |
0.589 |
|
| 2021 |
Willsey HR, Exner CRT, Xu Y, Everitt A, Sun N, Wang B, Dea J, Schmunk G, Zaltsman Y, Teerikorpi N, Kim A, Anderson AS, Shin D, Seyler M, Nowakowski TJ, et al. Parallel in vivo analysis of large-effect autism genes implicates cortical neurogenesis and estrogen in risk and resilience. Neuron. 109: 1409. PMID 33887193 DOI: 10.1016/j.neuron.2021.03.030 |
0.516 |
|
| 2021 |
Gillentine MA, Wang T, Hoekzema K, Rosenfeld J, Liu P, Guo H, Kim CN, De Vries BBA, Vissers LELM, Nordenskjold M, Kvarnung M, Lindstrand A, Nordgren A, Gecz J, Iascone M, ... ... Nowakowski T, et al. Rare deleterious mutations of HNRNP genes result in shared neurodevelopmental disorders. Genome Medicine. 13: 63. PMID 33874999 DOI: 10.1186/s13073-021-00870-6 |
0.623 |
|
| 2021 |
Eze UC, Bhaduri A, Haeussler M, Nowakowski TJ, Kriegstein AR. Single-cell atlas of early human brain development highlights heterogeneity of human neuroepithelial cells and early radial glia. Nature Neuroscience. PMID 33723434 DOI: 10.1038/s41593-020-00794-1 |
0.64 |
|
| 2021 |
Willsey HR, Exner CRT, Xu Y, Everitt A, Sun N, Wang B, Dea J, Schmunk G, Zaltsman Y, Teerikorpi N, Kim A, Anderson AS, Shin D, Seyler M, Nowakowski TJ, et al. Parallel in vivo analysis of large-effect autism genes implicates cortical neurogenesis and estrogen in risk and resilience. Neuron. PMID 33497602 DOI: 10.1016/j.neuron.2021.01.002 |
0.605 |
|
| 2020 |
Ross JM, Kim C, Allen D, Crouch EE, Narsinh K, Cooke DL, Abla AA, Nowakowski TJ, Winkler EA. The Expanding Cell Diversity of the Brain Vasculature. Frontiers in Physiology. 11: 600767. PMID 33343397 DOI: 10.3389/fphys.2020.600767 |
0.748 |
|
| 2020 |
Bhaduri A, Andrews MG, Kriegstein AR, Nowakowski TJ. Are Organoids Ready for Prime Time? Cell Stem Cell. 27: 361-365. PMID 32888425 DOI: 10.1016/J.Stem.2020.08.013 |
0.67 |
|
| 2020 |
Guo SM, Yeh LH, Folkesson J, Ivanov IE, Krishnan AP, Keefe MG, Hashemi E, Shin D, Chhun BB, Cho NH, Leonetti MD, Han MH, Nowakowski T, Mehta SB. Revealing architectural order with quantitative label-free imaging and deep learning. Elife. 9. PMID 32716843 DOI: 10.7554/Elife.55502 |
0.568 |
|
| 2020 |
Markenscoff-Papadimitriou E, Whalen S, Przytycki P, Thomas R, Binyameen F, Nowakowski TJ, Kriegstein AR, Sanders SJ, State MW, Pollard KS, Rubenstein JL. A Chromatin Accessibility Atlas of the Developing Human Telencephalon. Cell. PMID 32610082 DOI: 10.1016/J.Cell.2020.06.002 |
0.629 |
|
| 2020 |
Selvadurai HJ, Luis E, Desai K, Lan X, Vladoiu MC, Whitley O, Galvin C, Vanner RJ, Lee L, Whetstone H, Kushida M, Nowakowski T, Diamandis P, Hawkins C, Bader G, et al. Medulloblastoma Arises from the Persistence of a Rare and Transient Sox2 Granule Neuron Precursor. Cell Reports. 31: 107511. PMID 32294450 DOI: 10.1016/J.Celrep.2020.03.075 |
0.611 |
|
| 2020 |
Bhaduri A, Andrews MG, Mancia Leon W, Jung D, Shin D, Allen D, Jung D, Schmunk G, Haeussler M, Salma J, Pollen AA, Nowakowski TJ, Kriegstein AR. Cell stress in cortical organoids impairs molecular subtype specification. Nature. PMID 31996853 DOI: 10.1038/S41586-020-1962-0 |
0.824 |
|
| 2020 |
Keefe MG, Nowakowski TJ. Evolutionary Expansion of Human Cerebellar Germinal Zones. Trends in Neurosciences. PMID 31954525 DOI: 10.1016/J.Tins.2019.12.005 |
0.41 |
|
| 2020 |
Bhaduri A, Di Lullo E, Jung D, Müller S, Crouch EE, Espinosa CS, Ozawa T, Alvarado B, Spatazza J, Cadwell CR, Wilkins G, Velmeshev D, Liu SJ, Malatesta M, Andrews MG, ... ... Nowakowski TJ, et al. Outer Radial Glia-like Cancer Stem Cells Contribute to Heterogeneity of Glioblastoma. Cell Stem Cell. 26: 48-63.e6. PMID 31901251 DOI: 10.1016/J.Stem.2019.11.015 |
0.801 |
|
| 2019 |
Linsley JW, Tripathi A, Epstein I, Schmunk G, Mount E, Campioni M, Oza V, Barch M, Javaherian A, Nowakowski TJ, Samsi S, Finkbeiner S. Automated four-dimensional long term imaging enables single cell tracking within organotypic brain slices to study neurodevelopment and degeneration. Communications Biology. 2: 155. PMID 31925016 DOI: 10.1038/s42003-019-0411-9 |
0.656 |
|
| 2019 |
Guo H, Bettella E, Marcogliese PC, Zhao R, Andrews JC, Nowakowski TJ, Gillentine MA, Hoekzema K, Wang T, Wu H, Jangam S, Liu C, Ni H, Willemsen MH, van Bon BW, et al. Disruptive mutations in TANC2 define a neurodevelopmental syndrome associated with psychiatric disorders. Nature Communications. 10: 4679. PMID 31616000 DOI: 10.1038/S41467-019-12435-8 |
0.361 |
|
| 2019 |
Cadwell CR, Bhaduri A, Mostajo-Radji MA, Keefe MG, Nowakowski TJ. Development and Arealization of the Cerebral Cortex. Neuron. 103: 980-1004. PMID 31557462 DOI: 10.1016/J.Neuron.2019.07.009 |
0.762 |
|
| 2019 |
Andrews MG, Nowakowski TJ. Human brain development through the lens of cerebral organoid models. Brain Research. 1725: 146470. PMID 31542572 DOI: 10.1016/J.Brainres.2019.146470 |
0.67 |
|
| 2019 |
Keefe MG, Nowakowski TJ. A recipe book for cell types in the human brain. Nature. 573: 36-37. PMID 31481767 DOI: 10.1038/D41586-019-02343-8 |
0.449 |
|
| 2019 |
Linsley JW, Tripathi A, Epstein I, Schmunk G, Mount E, Campioni M, Oza V, Barch M, Javaherian A, Nowakowski TJ, Samsi S, Finkbeiner S. Automated four-dimensional long term imaging enables single cell tracking within organotypic brain slices to study neurodevelopment and degeneration. Communications Biology. 2: 155. PMID 31069265 DOI: 10.1038/s42003-019-0411-9 |
0.656 |
|
| 2019 |
Mayer S, Chen J, Velmeshev D, Mayer A, Eze UC, Bhaduri A, Cunha CE, Jung D, Arjun A, Li E, Alvarado B, Wang S, Lovegren N, Gonzales ML, Szpankowski L, ... ... Nowakowski TJ, et al. Multimodal Single-Cell Analysis Reveals Physiological Maturation in the Developing Human Neocortex. Neuron. PMID 30770253 DOI: 10.1016/J.Neuron.2019.01.027 |
0.797 |
|
| 2019 |
Pollen AA, Bhaduri A, Andrews MG, Nowakowski TJ, Meyerson OS, Mostajo-Radji MA, Di Lullo E, Alvarado B, Bedolli M, Dougherty ML, Fiddes IT, Kronenberg ZN, Shuga J, Leyrat AA, West JA, et al. Establishing Cerebral Organoids as Models of Human-Specific Brain Evolution. Cell. 176: 743-756.e17. PMID 30735633 DOI: 10.1016/J.Cell.2019.01.017 |
0.837 |
|
| 2019 |
Pai EL, Vogt D, Clemente-Perez A, McKinsey GL, Cho FS, Hu JS, Wimer M, Paul A, Fazel Darbandi S, Pla R, Nowakowski TJ, Goodrich LV, Paz JT, Rubenstein JLR. Mafb and c-Maf Have Prenatal Compensatory and Postnatal Antagonistic Roles in Cortical Interneuron Fate and Function. Cell Reports. 26: 1157-1173.e5. PMID 30699346 DOI: 10.1016/J.Celrep.2019.01.031 |
0.329 |
|
| 2019 |
Adorjan I, Tyler T, Bhaduri A, Demharter S, Finszter CK, Bako M, Sebok OM, Nowakowski TJ, Khodosevich K, Møllgård K, Kriegstein AR, Shi L, Hoerder-Suabedissen A, Ansorge O, Molnár Z. Neuroserpin expression during human brain development and in adult brain revealed by immunohistochemistry and single cell RNA sequencing. Journal of Anatomy. PMID 30644551 DOI: 10.1111/Joa.12931 |
0.653 |
|
| 2018 |
Nowakowski TJ, Rani N, Golkaram M, Zhou HR, Alvarado B, Huch K, West JA, Leyrat A, Pollen AA, Kriegstein AR, Petzold LR, Kosik KS. Regulation of cell-type-specific transcriptomes by microRNA networks during human brain development. Nature Neuroscience. PMID 30455455 DOI: 10.1038/S41593-018-0265-3 |
0.742 |
|
| 2018 |
Bhaduri A, Nowakowski TJ. Single-cell sequencing paints diverse pictures of the brain. Nature. 563: 38-39. PMID 30382219 DOI: 10.1038/D41586-018-07027-3 |
0.45 |
|
| 2018 |
Nowakowski TJ. Building blocks of the human brain. Science (New York, N.Y.). 362: 169. PMID 30309940 DOI: 10.1126/Science.Aav1252 |
0.355 |
|
| 2018 |
Bhaduri A, Nowakowski TJ, Pollen AA, Kriegstein AR. Identification of cell types in a mouse brain single-cell atlas using low sampling coverage. Bmc Biology. 16: 113. PMID 30309354 DOI: 10.1186/S12915-018-0580-X |
0.77 |
|
| 2018 |
Dougherty ML, Underwood JG, Nelson BJ, Tseng E, Munson KM, Penn O, Nowakowski TJ, Pollen AA, Eichler EE. Transcriptional fates of human-specific segmental duplications in brain. Genome Research. PMID 30228200 DOI: 10.1101/Gr.237610.118 |
0.701 |
|
| 2018 |
Willsey AJ, Morris MT, Wang S, Willsey HR, Sun N, Teerikorpi N, Baum TB, Cagney G, Bender KJ, Desai TA, Srivastava D, Davis GW, Doudna J, Chang E, Sohal V, ... ... Nowakowski TJ, et al. The Psychiatric Cell Map Initiative: A Convergent Systems Biological Approach to Illuminating Key Molecular Pathways in Neuropsychiatric Disorders. Cell. 174: 505-520. PMID 30053424 DOI: 10.1016/J.Cell.2018.06.016 |
0.316 |
|
| 2018 |
Fiddes IT, Lodewijk GA, Mooring M, Bosworth CM, Ewing AD, Mantalas GL, Novak AM, van den Bout A, Bishara A, Rosenkrantz JL, Lorig-Roach R, Field AR, Haeussler M, Russo L, Bhaduri A, ... Nowakowski TJ, et al. Human-Specific NOTCH2NL Genes Affect Notch Signaling and Cortical Neurogenesis. Cell. 173: 1356-1369.e22. PMID 29856954 DOI: 10.1016/J.Cell.2018.03.051 |
0.798 |
|
| 2018 |
Werling DM, Brand H, An JY, Stone MR, Zhu L, Glessner JT, Collins RL, Dong S, Layer RM, Markenscoff-Papadimitriou E, Farrell A, Schwartz GB, Wang HZ, Currall BB, Zhao X, ... ... Nowakowski TJ, et al. An analytical framework for whole-genome sequence association studies and its implications for autism spectrum disorder. Nature Genetics. PMID 29700473 DOI: 10.1038/S41588-018-0107-Y |
0.535 |
|
| 2018 |
Kosik KS, Nowakowski T. Evolution of New miRNAs and Cerebro-Cortical Development. Annual Review of Neuroscience. PMID 29618285 DOI: 10.1146/Annurev-Neuro-080317-061822 |
0.377 |
|
| 2017 |
Nowakowski TJ, Bhaduri A, Pollen AA, Alvarado B, Mostajo-Radji MA, Di Lullo E, Haeussler M, Sandoval-Espinosa C, Liu SJ, Velmeshev D, Ounadjela JR, Shuga J, Wang X, Lim DA, West JA, et al. Spatiotemporal gene expression trajectories reveal developmental hierarchies of the human cortex. Science (New York, N.Y.). 358: 1318-1323. PMID 29217575 DOI: 10.1126/Science.Aap8809 |
0.837 |
|
| 2017 |
Bershteyn M, Nowakowski TJ, Pollen AA, Di Lullo E, Nene A, Wynshaw-Boris A, Kriegstein AR. Human iPSC-Derived Cerebral Organoids Model Cellular Features of Lissencephaly and Reveal Prolonged Mitosis of Outer Radial Glia. Cell Stem Cell. PMID 28111201 DOI: 10.1016/J.Stem.2016.12.007 |
0.8 |
|
| 2017 |
Gambardella G, Carissimo A, Chen A, Cutillo L, Nowakowski TJ, di Bernardo D, Blelloch R. The impact of microRNAs on transcriptional heterogeneity and gene co-expression across single embryonic stem cells. Nature Communications. 8: 14126. PMID 28102192 DOI: 10.1038/Ncomms14126 |
0.383 |
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| 2016 |
Retallack H, Di Lullo E, Arias C, Knopp KA, Laurie MT, Sandoval-Espinosa C, Mancia Leon WR, Krencik R, Ullian EM, Spatazza J, Pollen AA, Mandel-Brehm C, Nowakowski TJ, Kriegstein AR, DeRisi JL. Zika virus cell tropism in the developing human brain and inhibition by azithromycin. Proceedings of the National Academy of Sciences of the United States of America. PMID 27911847 DOI: 10.1073/pnas.1618029113 |
0.764 |
|
| 2016 |
Müller S, Liu SJ, Di Lullo E, Malatesta M, Pollen AA, Nowakowski TJ, Kohanbash G, Aghi M, Kriegstein AR, Lim DA, Diaz A. Single-cell sequencing maps gene expression to mutational phylogenies in PDGF- and EGF-driven gliomas. Molecular Systems Biology. 12: 889. PMID 27888226 DOI: 10.15252/Msb.20166969 |
0.793 |
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| 2016 |
Nowakowski TJ, Pollen AA, Sandoval-Espinosa C, Kriegstein AR. Transformation of the Radial Glia Scaffold Demarcates Two Stages of Human Cerebral Cortex Development. Neuron. 91: 1219-27. PMID 27657449 DOI: 10.1016/J.Neuron.2016.09.005 |
0.771 |
|
| 2016 |
Rani N, Nowakowski TJ, Zhou H, Godshalk SE, Lisi V, Kriegstein AR, Kosik KS. A Primate lncRNA Mediates Notch Signaling during Neuronal Development by Sequestering miRNA. Neuron. PMID 27263970 DOI: 10.1016/J.Neuron.2016.05.005 |
0.615 |
|
| 2016 |
Diaz A, Liu SJ, Sandoval C, Pollen A, Nowakowski TJ, Lim DA, Kriegstein A. SCell: integrated analysis of single-cell RNA-seq data. Bioinformatics (Oxford, England). PMID 27153637 DOI: 10.1093/Bioinformatics/Btw201 |
0.775 |
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| 2016 |
Liu SJ, Nowakowski TJ, Pollen AA, Lui JH, Horlbeck MA, Attenello FJ, He D, Weissman JS, Kriegstein AR, Diaz AA, Lim DA. Single-cell analysis of long non-coding RNAs in the developing human neocortex. Genome Biology. 17: 67. PMID 27081004 DOI: 10.1186/S13059-016-0932-1 |
0.804 |
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| 2016 |
Nowakowski TJ, Pollen AA, Di Lullo E, Sandoval-Espinosa C, Bershteyn M, Kriegstein AR. Expression Analysis Highlights AXL as a Candidate Zika Virus Entry Receptor in Neural Stem Cells. Cell Stem Cell. PMID 27038591 DOI: 10.1016/J.Stem.2016.03.012 |
0.807 |
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| 2015 |
Pollen AA, Nowakowski TJ, Chen J, Retallack H, Sandoval-Espinosa C, Nicholas CR, Shuga J, Liu SJ, Oldham MC, Diaz A, Lim DA, Leyrat AA, West JA, Kriegstein AR. Molecular Identity of Human Outer Radial Glia during Cortical Development. Cell. 163: 55-67. PMID 26406371 DOI: 10.1016/J.Cell.2015.09.004 |
0.825 |
|
| 2015 |
Ramos AD, Andersen RE, Liu SJ, Nowakowski TJ, Hong SJ, Gertz CC, Salinas RD, Zarabi H, Kriegstein AR, Lim DA. The long noncoding RNA Pnky regulates neuronal differentiation of embryonic and postnatal neural stem cells. Cell Stem Cell. 16: 439-47. PMID 25800779 DOI: 10.1016/J.Stem.2015.02.007 |
0.732 |
|
| 2014 |
Lui JH, Nowakowski TJ, Pollen AA, Javaherian A, Kriegstein AR, Oldham MC. Radial glia require PDGFD-PDGFRβ signalling in human but not mouse neocortex. Nature. 515: 264-8. PMID 25391964 DOI: 10.1038/Nature13973 |
0.815 |
|
| 2014 |
Pollen AA, Nowakowski TJ, Shuga J, Wang X, Leyrat AA, Lui JH, Li N, Szpankowski L, Fowler B, Chen P, Ramalingam N, Sun G, Thu M, Norris M, Lebofsky R, et al. Low-coverage single-cell mRNA sequencing reveals cellular heterogeneity and activated signaling pathways in developing cerebral cortex. Nature Biotechnology. 32: 1053-8. PMID 25086649 DOI: 10.1038/Nbt.2967 |
0.812 |
|
| 2013 |
Nowakowski TJ, Mysiak KS, O'Leary T, Fotaki V, Pratt T, Price DJ. Loss of functional Dicer in mouse radial glia cell-autonomously prolongs cortical neurogenesis. Developmental Biology. 382: 530-7. PMID 24012747 DOI: 10.1016/J.Ydbio.2013.08.023 |
0.534 |
|
| 2013 |
Nowakowski TJ, Fotaki V, Pollock A, Sun T, Pratt T, Price DJ. MicroRNA-92b regulates the development of intermediate cortical progenitors in embryonic mouse brain. Proceedings of the National Academy of Sciences of the United States of America. 110: 7056-61. PMID 23569256 DOI: 10.1073/Pnas.1219385110 |
0.506 |
|
| 2012 |
Pratt T, Davey JW, Nowakowski TJ, Raasumaa C, Rawlik K, McBride D, Clinton M, Mason JO, Price DJ. The expression and activity of β-catenin in the thalamus and its projections to the cerebral cortex in the mouse embryo. Bmc Neuroscience. 13: 20. PMID 22360971 DOI: 10.1186/1471-2202-13-20 |
0.486 |
|
| 2011 |
Nowakowski TJ, Mysiak KS, Pratt T, Price DJ. Functional dicer is necessary for appropriate specification of radial glia during early development of mouse telencephalon. Plos One. 6: e23013. PMID 21826226 DOI: 10.1371/Journal.Pone.0023013 |
0.549 |
|
| 2010 |
Quinn JC, Molinek M, Nowakowski TJ, Mason JO, Price DJ. Novel lines of Pax6-/- embryonic stem cells exhibit reduced neurogenic capacity without loss of viability. Bmc Neuroscience. 11: 26. PMID 20178645 DOI: 10.1186/1471-2202-11-26 |
0.547 |
|
| 2009 |
Nowakowski TJ, Pratt T, Price DJ. 01-P027 Investigating the roles of dicer1 endoribonuclease in embryonic organogenesis of mouse retina Mechanisms of Development. 126: S58-S59. DOI: 10.1016/J.Mod.2009.06.028 |
0.41 |
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