Sakkapol Ongwijitwat, Ph.D. - Related publications

Affiliations: 
2005 Medical College of Wisconsin, Milwaukee, WI, United States 
Area:
Molecular Biology
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 Fischer J, Song YS, Yosef N, di Iulio J, Churchman LS, Choder M. The yeast exoribonuclease Xrn1 and associated factors modulate RNA polymerase II processivity in 5' and 3' gene regions. The Journal of Biological Chemistry. PMID 32518159 DOI: 10.1074/jbc.RA120.013426   
2020 Páhi ZG, Borsos BN, Pantazi V, Ujfaludi Z, Pankotai T. PARylation During Transcription: Insights into the Fine-Tuning Mechanism and Regulation. Cancers. 12. PMID 31940791 DOI: 10.3390/cancers12010183   
2020 Louphrasitthiphol P, Siddaway R, Loffreda A, Pogenberg V, Friedrichsen H, Schepsky A, Zeng Z, Lu M, Strub T, Freter R, Lisle R, Suer E, Thomas B, Schuster-Böckler B, Filippakopoulos P, et al. Tuning Transcription Factor Availability through Acetylation-Mediated Genomic Redistribution. Molecular Cell. PMID 32531202 DOI: 10.1016/j.molcel.2020.05.025   
2020 Aphasizheva I, Yu T, Suematsu T, Liu Q, Mesitov MV, Yu C, Huang L, Zhang L, Aphasizhev R. Poly(A) binding KPAF4/5 complex stabilizes kinetoplast mRNAs in Trypanosoma brucei. Nucleic Acids Research. PMID 32614436 DOI: 10.1093/nar/gkaa575   
2020 Noble JD, Balmant KM, Dervinis C, de Los Campos G, Resende MFR, Kirst M, Barbazuk WB. The Genetic Regulation of Alternative Splicing in . Frontiers in Plant Science. 11: 590. PMID 32582229 DOI: 10.3389/fpls.2020.00590   
2020 Yang H, Xiu Z, Wang L, Cao SK, Li X, Sun F, Tan BC. Two Pentatricopeptide Repeat Proteins Are Required for the Splicing of Introns in Maize. Frontiers in Plant Science. 11: 732. PMID 32582256 DOI: 10.3389/fpls.2020.00732   
2020 Criscuolo S, Gatti Iou M, Merolla A, Maragliano L, Cesca F, Benfenati F. Engineering REST-specific synthetic PUF proteins to control neuronal gene expression: a combined experimental and computational study. Acs Synthetic Biology. PMID 32678979 DOI: 10.1021/acssynbio.0c00119   
2020 Zhou F, Teng X, Wang P, Zhang Y, Miao Y. Isolation, identification, expression and subcellular localization of PPARG gene in buffalo mammary gland. Gene. 144981. PMID 32707300 DOI: 10.1016/j.gene.2020.144981   
2020 Tsuboi T, Viana MP, Xu F, Yu J, Chanchani R, Arceo XG, Tutucci E, Choi J, Chen YS, Singer RH, Rafelski SM, Zid BM. Mitochondrial volume fraction and translation duration impact mitochondrial mRNA localization and protein synthesis. Elife. 9. PMID 32762840 DOI: 10.7554/eLife.57814   
2020 Li J, Li Y, Ni H, Yang Z, Chen J, Li Y, Ding S, Jiang X, Wang M, Li L, Lv X, Ruan X, Jiang Q, Lei Z, Cheng Y, et al. A Novel Splice-Site Mutation in Is Associated With the Development of Lynch Syndrome. Frontiers in Oncology. 10: 983. PMID 32637358 DOI: 10.3389/fonc.2020.00983   
2020 Chikashige Y, Kato H, Thornton M, Pepper W, Hilgers M, Cecil A, Asano I, Yamada H, Mori C, Brunkow C, Moravek C, Urano T, Singh CR, Asano K. Gcn2 eIF2α kinase mediates combinatorial translational regulation through nucleotide motifs and uORFs in target mRNAs. Nucleic Acids Research. PMID 32710633 DOI: 10.1093/nar/gkaa608   
2020 Borowski LS, Szczesny RJ. Loading messenger RNAs onto ribosomes in human mitochondria: lessons learned from a bacterial toxin. The Febs Journal. PMID 32588551 DOI: 10.1111/febs.15435   
2020 Kaiser RWJ, Erber J, Höpker K, Fabretti F, Müller RU. AATF/Che-1-An RNA Binding Protein at the Nexus of DNA Damage Response and Ribosome Biogenesis. Frontiers in Oncology. 10: 919. PMID 32587828 DOI: 10.3389/fonc.2020.00919   
2020 Zhang H, Lu J, Wu S. Sp4 controls constitutive expression of neuronal serine racemase and NF-E2-related factor-2 mediates its induction by valproic acid. Biochimica Et Biophysica Acta. Gene Regulatory Mechanisms. 194597. PMID 32603878 DOI: 10.1016/j.bbagrm.2020.194597   
2020 Li X, Zhang F, Ma J, Ruan X, Liu X, Zheng J, Liu Y, Cao S, Shen S, Shao L, Cai H, Li Z, Xue Y. NCBP3/SNHG6 inhibits GBX2 transcription in a histone modification manner to facilitate the malignant biological behavior of glioma cells. Rna Biology. PMID 32618493 DOI: 10.1080/15476286.2020.1790140   
2020 López García de Lomana A, Kusebauch U, Raman AV, Pan M, Turkarslan S, Lorenzetti APR, Moritz RL, Baliga NS. Selective Translation of Low Abundance and Upregulated Transcripts in Halobacterium salinarum. Msystems. 5. PMID 32723790 DOI: 10.1128/mSystems.00329-20   
2020 Mopidevi B, Sivankutty I, Hao S, Ferreri NR, Kumar A. Effects of intron conversion in the human gene on its transcription and blood pressure regulation in transgenic mice. The Journal of Biological Chemistry. PMID 32540969 DOI: 10.1074/jbc.RA120.013047   
2020 Ruanto P, Chismon DJ, Hothersall J, Godfrey RE, Lee DJ, Busby SJW, Browning DF. Activation by NarL at the Escherichia coliogt promoter. The Biochemical Journal. PMID 32662815 DOI: 10.1042/BCJ20200408   
2020 Sebbag-Sznajder N, Brody Y, Hochberg-Laufer H, Shav-Tal Y, Sperling J, Sperling R. Dynamic Supraspliceosomes Are Assembled on Different Transcripts Regardless of Their Intron Number and Splicing State. Frontiers in Genetics. 11: 409. PMID 32499811 DOI: 10.3389/fgene.2020.00409   
2020 Shuman S. Transcriptional interference at tandem lncRNA and protein-coding genes: an emerging theme in regulation of cellular nutrient homeostasis. Nucleic Acids Research. PMID 32720681 DOI: 10.1093/nar/gkaa630   
2020 Hafner A, Reyes J, Stewart-Ornstein J, Tsabar M, Jambhekar A, Lahav G. Quantifying the Central Dogma in the p53 Pathway in Live Single Cells. Cell Systems. PMID 32533938 DOI: 10.1016/j.cels.2020.05.001   
2020 Romagnoli BAA, Holetz FB, Alves LR, Goldenberg S. RNA Binding Proteins and Gene Expression Regulation in . Frontiers in Cellular and Infection Microbiology. 10: 56. PMID 32154189 DOI: 10.3389/fcimb.2020.00056   
2020 Girbes Minguez M, Wolters-Eisfeld G, Lutz D, Buck F, Schachner M, Kleene R. The cell adhesion molecule L1 interacts with nuclear proteins via its intracellular domain. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. PMID 32533745 DOI: 10.1096/fj.201902242R   
2020 Liu Y, Li H, Li J, Zhou Y, Zhou Z, Wang P, Zhou S. Characterization of the promoter of the nitrate transporter-encoding gene nrtA in Aspergillus nidulans. Molecular Genetics and Genomics : Mgg. PMID 32561986 DOI: 10.1007/s00438-020-01700-x   
2020 Hu L, Li H, Chi Z, He J. Loss of the RNA-binding protein Rbm15 disrupts liver maturation in zebrafish. The Journal of Biological Chemistry. PMID 32518161 DOI: 10.1074/jbc.RA120.014080   
2020 Liu B, Liu GD, Guo HY, Zhu KC, Guo L, Zhang N, Liu BS, Jiang SG, Zhang DC. Characterization and functional analysis of liver-expressed antimicrobial peptide-2 (LEAP-2) from golden pompano Trachinotus ovatus (Linnaeus 1758). Fish & Shellfish Immunology. PMID 32562868 DOI: 10.1016/j.fsi.2020.06.029   
2020 Han BY, Seah MKY, Brooks IR, Quek DHP, Huxley DR, Foo CS, Lee LT, Wollmann H, Guo H, Messerschmidt DM, Guccione E. Global translation during early development depends on the essential transcription factor PRDM10. Nature Communications. 11: 3603. PMID 32681107 DOI: 10.1038/s41467-020-17304-3   
2020 Liu R, Cao SK, Sayyed A, Xu C, Sun F, Wang X, Tan BC. The Mitochondrial Pentatricopeptide Repeat Protein PPR18 Is Required for the -Splicing of Intron 1 and Essential to Seed Development in Maize. International Journal of Molecular Sciences. 21. PMID 32516991 DOI: 10.3390/ijms21114047   
2020 Weil D, Piton A, Lessel D, Standart N. Mutations in genes encoding regulators of mRNA decapping and translation initiation: links to intellectual disability. Biochemical Society Transactions. PMID 32412080 DOI: 10.1042/BST20200109   
2020 Shen Z, Hoeksema MA, Ouyang Z, Benner C, Glass CK. MAGGIE: leveraging genetic variation to identify DNA sequence motifs mediating transcription factor binding and function. Bioinformatics (Oxford, England). 36: i84-i92. PMID 32657363 DOI: 10.1093/bioinformatics/btaa476   
2020 Yuan Z, Ye M, Qie J, Ye T. FOXA1 Promotes Cell Proliferation and Suppresses Apoptosis in HCC by Directly Regulating miR-212-3p/FOXA1/AGR2 Signaling Pathway. Oncotargets and Therapy. 13: 5231-5240. PMID 32606743 DOI: 10.2147/OTT.S252890   
2020 Zhang Y, Li Z, Chen N, Huang Y, Huang S. Phase separation of Arabidopsis EMB1579 controls transcription, mRNA splicing, and development. Plos Biology. 18: e3000782. PMID 32692742 DOI: 10.1371/journal.pbio.3000782   
2020 Tian Y, Zeng Z, Li X, Wang Y, Chen R, Mattijssen S, Gaidamakov S, Wu Y, Maraia RJ, Peng W, Zhu J. Transcriptome-wide stability analysis uncovers LARP4-mediated NFκB1 mRNA stabilization during T cell activation. Nucleic Acids Research. PMID 32735645 DOI: 10.1093/nar/gkaa643   
2020 Mikedis MM, Fan Y, Nicholls PK, Endo T, Jackson EK, Cobb SA, de Rooij DG, Page DC. DAZL mediates a broad translational program regulating expansion and differentiation of spermatogonial progenitors. Elife. 9. PMID 32686646 DOI: 10.7554/eLife.56523   
2020 Wang HC, Chen Z, Yang YZ, Sun F, Ding S, Li XL, Xu C, Tan BC. PPR14 Interacts With PPR-SMR1 and CRM Protein Zm-mCSF1 to Facilitate Mitochondrial Intron Splicing in Maize. Frontiers in Plant Science. 11: 814. PMID 32595685 DOI: 10.3389/fpls.2020.00814   
2020 Matsuki Y, Saito T, Nakano Y, Hashimoto S, Matsuo Y, Inada T. Crucial role of leaky initiation of uORF3 in the downregulation of HNT1 by ER stress. Biochemical and Biophysical Research Communications. 528: 186-192. PMID 32475637 DOI: 10.1016/j.bbrc.2020.04.104   
2020 Mao Y, Ding JW, Chen MS, Cen S, Li XY. [SLFN14 inhibits LINE-1 transposition activity]. Yi Chuan = Hereditas. 42: 669-679. PMID 32694106 DOI: 10.16288/j.yczz.20-081   
2020 Abou Alezz M, Celli L, Belotti G, Lisa A, Bione S. GC-AG Introns Features in Long Non-coding and Protein-Coding Genes Suggest Their Role in Gene Expression Regulation. Frontiers in Genetics. 11: 488. PMID 32499820 DOI: 10.3389/fgene.2020.00488   
2020 Keller M, Gebhardt C, Huth S, Schleinitz D, Heyne H, Scholz M, Stumvoll M, Böttcher Y, Tönjes A, Kovacs P. Genetically programmed changes in transcription of the novel progranulin regulator. Journal of Molecular Medicine (Berlin, Germany). PMID 32620998 DOI: 10.1007/s00109-020-01942-7   
2020 Kishor A, Fritz SE, Haque N, Ge Z, Tunc I, Yang W, Zhu J, Hogg JR. Activation and inhibition of nonsense-mediated mRNA decay control the abundance of alternative polyadenylation products. Nucleic Acids Research. PMID 32542372 DOI: 10.1093/nar/gkaa491   
2020 Showpnil IA, Miller KR, Taslim C, Pishas KI, Lessnick SL, Theisen ER. Mapping the Structure-Function Relationships of Disordered Oncogenic Transcription Factors Using Transcriptomic Analysis. Journal of Visualized Experiments : Jove. PMID 32658189 DOI: 10.3791/61564   
2020 Lee JY, Fan CC, Chou NL, Lin HW, Chang MS. PHRF1 promotes migration and invasion by modulating ZEB1 expression. Plos One. 15: e0236876. PMID 32730336 DOI: 10.1371/journal.pone.0236876   
2020 Fliedner A, Kirchner P, Wiesener A, van de Beek I, Waisfisz Q, van Haelst M, Scott DA, Lalani SR, Rosenfeld JA, Azamian MS, Xia F, Dutra-Clarke M, Martinez-Agosto JA, Lee H, , et al. Variants in SCAF4 Cause a Neurodevelopmental Disorder and Are Associated with Impaired mRNA Processing. American Journal of Human Genetics. PMID 32730804 DOI: 10.1016/j.ajhg.2020.06.019   
2020 Lopes AG, de Almeida Júnior GC, Teixeira RM, de Mattos LC, Brandão de Mattos CC, Castiglioni L. Absence of the c.169+50delTAAACAG mutation of SOD1 gene in a sample of keratoconus patients in Brazilian population. Bmc Research Notes. 13: 328. PMID 32646478 DOI: 10.1186/s13104-020-05166-3   
2020 Arribere JA, Kuroyanagi H, Hundley HA. mRNA Editing, Processing and Quality Control in . Genetics. 215: 531-568. PMID 32632025 DOI: 10.1534/genetics.119.301807   
2020 Quintero-Cadena P, Lenstra TL, Sternberg PW. RNA Pol II Length and Disorder Enable Cooperative Scaling of Transcriptional Bursting. Molecular Cell. PMID 32544389 DOI: 10.1016/j.molcel.2020.05.030   
2020 Biswas J, Rahman R, Gupta V, Rosbash M, Singer RH. MS2-TRIBE Evaluates Both Protein-RNA Interactions and Nuclear Organization of Transcription by RNA Editing. Iscience. 23: 101318. PMID 32674054 DOI: 10.1016/j.isci.2020.101318   
2020 Grimm C, Pelz JP, Schneider C, Schäffler K, Fischer U. Crystal Structure of a Variant PAM2 Motif of LARP4B Bound to the MLLE Domain of PABPC1. Biomolecules. 10. PMID 32517187 DOI: 10.3390/biom10060872   
2020 Hurtig JE, Kim M, Orlando-Coronel LJ, Ewan J, Foreman M, Notice LA, Steiger MA, van Hoof A. Origin, Conservation, and Loss of Alternative Splicing Events that Diversify the Proteome in Saccharomycotina Budding Yeasts. Rna (New York, N.Y.). PMID 32631843 DOI: 10.1261/rna.075655.120   
2020 Carvill GL, Mefford HC. Poison exons in neurodevelopment and disease. Current Opinion in Genetics & Development. 65: 98-102. PMID 32615329 DOI: 10.1016/j.gde.2020.05.030