Year |
Citation |
Score |
2023 |
Du C, Jiang J, Li Y, Yu M, Jin J, Chen S, Fan H, Macfarlan TS, Cao B, Sun MA. Regulation of endogenous retrovirus-derived regulatory elements by GATA2/3 and MSX2 in human trophoblast stem cells. Genome Research. PMID 36806146 DOI: 10.1101/gr.277150.122 |
0.344 |
|
2021 |
Agarwal S, Bonefas KM, Garay PM, Brookes E, Murata-Nakamura Y, Porter RS, Macfarlan TS, Ren B, Iwase S. KDM1A maintains genome-wide homeostasis of transcriptional enhancers. Genome Research. PMID 33414108 DOI: 10.1101/gr.234559.118 |
0.437 |
|
2020 |
Bertozzi TM, Elmer JL, Macfarlan TS, Ferguson-Smith AC. KRAB zinc finger protein diversification drives mammalian interindividual methylation variability. Proceedings of the National Academy of Sciences of the United States of America. 117: 31290-31300. PMID 33239447 DOI: 10.1073/pnas.2017053117 |
0.369 |
|
2020 |
Kumar J, Kaur G, Ren R, Lu Y, Lin K, Li J, Huang Y, Patel A, Barton MC, Macfarlan T, Zhang X, Cheng X. KRAB domain of ZFP568 disrupts TRIM28-mediated abnormal interactions in cancer cells. Nar Cancer. 2: zcaa007. PMID 32743551 DOI: 10.1093/narcan/zcaa007 |
0.382 |
|
2020 |
Mahgoub M, Paiano J, Bruno M, Wu W, Pathuri S, Zhang X, Ralls S, Cheng X, Nussenzweig A, Macfarlan TS. Dual histone methyl reader ZCWPW1 facilitates repair of meiotic double strand breaks in male mice. Elife. 9. PMID 32352380 DOI: 10.7554/Elife.53360 |
0.43 |
|
2020 |
Chen C, Sun MA, Warzecha C, Bachu M, Dey A, Wu T, Adams PD, Macfarlan T, Love P, Ozato K. HIRA, a DiGeorge Syndrome Candidate Gene, Confers Proper Chromatin Accessibility on HSCs and Supports All Stages of Hematopoiesis. Cell Reports. PMID 32075733 DOI: 10.1016/J.Celrep.2020.01.062 |
0.463 |
|
2020 |
Yang F, Huang X, Zang R, Chen J, Fidalgo M, Sanchez-Priego C, Yang J, Caichen A, Ma F, Macfarlan T, Wang H, Gao S, Zhou H, Wang J. DUX-miR-344-ZMYM2-Mediated Activation of MERVL LTRs Induces a Totipotent 2C-like State. Cell Stem Cell. 26: 234-250.e7. PMID 32032525 DOI: 10.1016/J.Stem.2020.01.004 |
0.303 |
|
2019 |
Seah MKY, Wang Y, Goy PV, Loh HM, Peh WJ, Loh DHP, Han BY, Wong E, Leong EL, Wolf G, Mzoughi S, Wollmann H, Macfarlan TS, Guccione E, Messerschmidt DM. The KRAB-Zinc finger protein ZFP708 mediates epigenetic repression at RMER19B retrotransposons. Development (Cambridge, England). PMID 30846446 DOI: 10.1242/dev.170266 |
0.408 |
|
2018 |
Patel A, Yang P, Tinkham M, Pradhan M, Sun MA, Wang Y, Hoang D, Wolf G, Horton JR, Zhang X, Macfarlan T, Cheng X. DNA Conformation Induces Adaptable Binding by Tandem Zinc Finger Proteins. Cell. PMID 29551271 DOI: 10.1016/J.Cell.2018.02.058 |
0.391 |
|
2017 |
Yang P, Wang Y, Macfarlan TS. The Role of KRAB-ZFPs in Transposable Element Repression and Mammalian Evolution. Trends in Genetics : Tig. PMID 28935117 DOI: 10.1016/J.Tig.2017.08.006 |
0.404 |
|
2016 |
Wang C, Lee JE, Lai B, Macfarlan TS, Xu S, Zhuang L, Liu C, Peng W, Ge K. Enhancer priming by H3K4 methyltransferase MLL4 controls cell fate transition. Proceedings of the National Academy of Sciences of the United States of America. PMID 27698142 DOI: 10.1073/Pnas.1606857113 |
0.331 |
|
2016 |
Thompson PJ, Macfarlan TS, Lorincz MC. Long Terminal Repeats: From Parasitic Elements to Building Blocks of the Transcriptional Regulatory Repertoire. Molecular Cell. 62: 766-776. PMID 27259207 DOI: 10.1016/j.molcel.2016.03.029 |
0.331 |
|
2015 |
Geeven G, Zhu Y, Kim BJ, Bartholdy BA, Yang SM, Macfarlan TS, Gifford WD, Pfaff SL, Verstegen MJ, Pinto H, Vermunt MW, Creyghton MP, Wijchers PJ, Stamatoyannopoulos JA, Skoultchi AI, et al. Local compartment changes and regulatory landscape alterations in histone H1-depleted cells. Genome Biology. 16: 289. PMID 26700097 DOI: 10.1186/S13059-015-0857-0 |
0.537 |
|
2015 |
Wolf G, Yang P, Füchtbauer AC, Füchtbauer EM, Silva AM, Park C, Wu W, Nielsen AL, Pedersen FS, Macfarlan TS. The KRAB zinc finger protein ZFP809 is required to initiate epigenetic silencing of endogenous retroviruses. Genes & Development. 29: 538-54. PMID 25737282 DOI: 10.1101/Gad.252767.114 |
0.491 |
|
2015 |
Yang P, Wu W, Macfarlan TS. Maternal histone variants and their chaperones promote paternal genome activation and boost somatic cell reprogramming. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 37: 52-9. PMID 25328107 DOI: 10.1002/Bies.201400072 |
0.492 |
|
2013 |
Rowe HM, Kapopoulou A, Corsinotti A, Fasching L, Macfarlan TS, Tarabay Y, Viville S, Jakobsson J, Pfaff SL, Trono D. TRIM28 repression of retrotransposon-based enhancers is necessary to preserve transcriptional dynamics in embryonic stem cells. Genome Research. 23: 452-61. PMID 23233547 DOI: 10.1101/Gr.147678.112 |
0.427 |
|
2011 |
Macfarlan TS, Gifford WD, Agarwal S, Driscoll S, Lettieri K, Wang J, Andrews SE, Franco L, Rosenfeld MG, Ren B, Pfaff SL. Endogenous retroviruses and neighboring genes are coordinately repressed by LSD1/KDM1A. Genes & Development. 25: 594-607. PMID 21357675 DOI: 10.1101/Gad.2008511 |
0.338 |
|
2009 |
Loomis RJ, Naoe Y, Parker JB, Savic V, Bozovsky MR, Macfarlan T, Manley JL, Chakravarti D. Chromatin binding of SRp20 and ASF/SF2 and dissociation from mitotic chromosomes is modulated by histone H3 serine 10 phosphorylation. Molecular Cell. 33: 450-61. PMID 19250906 DOI: 10.1016/J.Molcel.2009.02.003 |
0.774 |
|
2006 |
Macfarlan T, Parker JB, Nagata K, Chakravarti D. Thanatos-associated protein 7 associates with template activating factor-Ibeta and inhibits histone acetylation to repress transcription. Molecular Endocrinology (Baltimore, Md.). 20: 335-47. PMID 16195249 DOI: 10.1210/Me.2005-0248 |
0.814 |
|
2005 |
Macfarlan T, Kutney S, Altman B, Montross R, Yu J, Chakravarti D. Human THAP7 is a chromatin-associated, histone tail-binding protein that represses transcription via recruitment of HDAC3 and nuclear hormone receptor corepressor. The Journal of Biological Chemistry. 280: 7346-58. PMID 15561719 DOI: 10.1074/Jbc.M411675200 |
0.687 |
|
2004 |
Hong R, Macfarlan T, Kutney SN, Seo SB, Mukai Y, Yelin F, Pasternack GR, Chakravarti D. The identification of phosphorylation sites of pp32 and biochemical purification of a cellular pp32-kinase. Biochemistry. 43: 10157-65. PMID 15287743 DOI: 10.1021/Bi0493968 |
0.63 |
|
2004 |
Kutney SN, Hong R, Macfarlan T, Chakravarti D. A signaling role of histone-binding proteins and INHAT subunits pp32 and Set/TAF-Ibeta in integrating chromatin hypoacetylation and transcriptional repression. The Journal of Biological Chemistry. 279: 30850-5. PMID 15136563 DOI: 10.1074/Jbc.M404969200 |
0.689 |
|
2002 |
Li F, Macfarlan T, Pittman RN, Chakravarti D. Ataxin-3 is a histone-binding protein with two independent transcriptional corepressor activities. The Journal of Biological Chemistry. 277: 45004-12. PMID 12297501 DOI: 10.1074/Jbc.M205259200 |
0.784 |
|
2002 |
Seo SB, Macfarlan T, McNamara P, Hong R, Mukai Y, Heo S, Chakravarti D. Regulation of histone acetylation and transcription by nuclear protein pp32, a subunit of the INHAT complex. The Journal of Biological Chemistry. 277: 14005-10. PMID 11830591 DOI: 10.1074/Jbc.M112455200 |
0.813 |
|
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