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Year Citation  Score
2015 Engel KL, French SL, Viktorovskaya OV, Beyer AL, Schneider DA. Spt6 Is Essential for rRNA Synthesis by RNA Polymerase I. Molecular and Cellular Biology. 35: 2321-31. PMID 25918242 DOI: 10.1128/MCB.01499-14  0.96
2015 Soltanieh S, Osheim YN, Spasov K, Trahan C, Beyer AL, Dragon F. DEAD-box RNA helicase Dbp4 is required for small-subunit processome formation and function. Molecular and Cellular Biology. 35: 816-30. PMID 25535329 DOI: 10.1128/MCB.01348-14  0.96
2014 Axt K, French SL, Beyer AL, Tollervey D. Kinetic analysis demonstrates a requirement for the Rat1 exonuclease in cotranscriptional pre-rRNA cleavage. Plos One. 9: e85703. PMID 24498264 DOI: 10.1371/journal.pone.0085703  0.96
2014 Harris B, Bose T, Lee KK, Wang F, Lu S, Ross RT, Zhang Y, French SL, Beyer AL, Slaughter BD, Unruh JR, Gerton JL. Cohesion promotes nucleolar structure and function. Molecular Biology of the Cell. 25: 337-46. PMID 24307683 DOI: 10.1091/mbc.E13-07-0377  0.96
2013 Lebaron S, Segerstolpe A, French SL, Dudnakova T, de Lima Alves F, Granneman S, Rappsilber J, Beyer AL, Wieslander L, Tollervey D. Rrp5 binding at multiple sites coordinates pre-rRNA processing and assembly. Molecular Cell. 52: 707-19. PMID 24239293 DOI: 10.1016/j.molcel.2013.10.017  0.96
2013 Johnson JM, French SL, Osheim YN, Li M, Hall L, Beyer AL, Smith JS. Rpd3- and spt16-mediated nucleosome assembly and transcriptional regulation on yeast ribosomal DNA genes. Molecular and Cellular Biology. 33: 2748-59. PMID 23689130 DOI: 10.1128/MCB.00112-13  0.96
2013 Zhang Y, Anderson SJ, French SL, Sikes ML, Viktorovskaya OV, Huband J, Holcomb K, Hartman JL, Beyer AL, Schneider DA. The SWI/SNF chromatin remodeling complex influences transcription by RNA polymerase I in Saccharomyces cerevisiae. Plos One. 8: e56793. PMID 23437238 DOI: 10.1371/journal.pone.0056793  0.96
2011 Lemay V, Hossain A, Osheim YN, Beyer AL, Dragon F. Identification of novel proteins associated with yeast snR30 small nucleolar RNA. Nucleic Acids Research. 39: 9659-70. PMID 21893585 DOI: 10.1093/nar/gkr659  0.96
2011 Huber A, French SL, Tekotte H, Yerlikaya S, Stahl M, Perepelkina MP, Tyers M, Rougemont J, Beyer AL, Loewith R. Sch9 regulates ribosome biogenesis via Stb3, Dot6 and Tod6 and the histone deacetylase complex RPD3L. The Embo Journal. 30: 3052-64. PMID 21730963 DOI: 10.1038/emboj.2011.221  0.96
2011 Anderson SJ, Sikes ML, Zhang Y, French SL, Salgia S, Beyer AL, Nomura M, Schneider DA. The transcription elongation factor Spt5 influences transcription by RNA polymerase I positively and negatively. The Journal of Biological Chemistry. 286: 18816-24. PMID 21467039 DOI: 10.1074/jbc.M110.202101  0.96
2011 French SL, Sikes ML, Hontz RD, Osheim YN, Lambert TE, El Hage A, Smith MM, Tollervey D, Smith JS, Beyer AL. Distinguishing the roles of Topoisomerases I and II in relief of transcription-induced torsional stress in yeast rRNA genes. Molecular and Cellular Biology. 31: 482-94. PMID 21098118 DOI: 10.1128/MCB.00589-10  0.96
2010 El Hage A, French SL, Beyer AL, Tollervey D. Loss of Topoisomerase I leads to R-loop-mediated transcriptional blocks during ribosomal RNA synthesis. Genes & Development. 24: 1546-58. PMID 20634320 DOI: 10.1101/gad.573310  0.96
2009 Lundkvist P, Jupiter S, Segerstolpe A, Osheim YN, Beyer AL, Wieslander L. Mrd1p is required for release of base-paired U3 snoRNA within the preribosomal complex. Molecular and Cellular Biology. 29: 5763-74. PMID 19704003 DOI: 10.1128/MCB.00428-09  0.96
2009 Zhang Y, Sikes ML, Beyer AL, Schneider DA. The Paf1 complex is required for efficient transcription elongation by RNA polymerase I. Proceedings of the National Academy of Sciences of the United States of America. 106: 2153-8. PMID 19164765 DOI: 10.1073/pnas.0812939106  0.96
2009 Osheim YN, French SL, Sikes ML, Beyer AL. Electron microscope visualization of RNA transcription and processing in Saccharomyces cerevisiae by Miller chromatin spreading. Methods in Molecular Biology (Clifton, N.J.). 464: 55-69. PMID 18951179 DOI: 10.1007/978-1-60327-461-6_4  0.96
2008 Hontz RD, French SL, Oakes ML, Tongaonkar P, Nomura M, Beyer AL, Smith JS. Transcription of multiple yeast ribosomal DNA genes requires targeting of UAF to the promoter by Uaf30. Molecular and Cellular Biology. 28: 6709-19. PMID 18765638 DOI: 10.1128/MCB.00703-08  0.96
2008 Vanrobays E, Leplus A, Osheim YN, Beyer AL, Wacheul L, Lafontaine DL. TOR regulates the subcellular distribution of DIM2, a KH domain protein required for cotranscriptional ribosome assembly and pre-40S ribosome export. Rna (New York, N.Y.). 14: 2061-73. PMID 18755838 DOI: 10.1261/rna.1176708  0.96
2008 Segerstolpe A, Lundkvist P, Osheim YN, Beyer AL, Wieslander L. Mrd1p binds to pre-rRNA early during transcription independent of U3 snoRNA and is required for compaction of the pre-rRNA into small subunit processomes. Nucleic Acids Research. 36: 4364-80. PMID 18586827 DOI: 10.1093/nar/gkn384  0.96
2008 French SL, Osheim YN, Schneider DA, Sikes ML, Fernandez CF, Copela LA, Misra VA, Nomura M, Wolin SL, Beyer AL. Visual analysis of the yeast 5S rRNA gene transcriptome: regulation and role of La protein. Molecular and Cellular Biology. 28: 4576-87. PMID 18474615 DOI: 10.1128/MCB.00127-08  0.96
2007 Schneider DA, Michel A, Sikes ML, Vu L, Dodd JA, Salgia S, Osheim YN, Beyer AL, Nomura M. Transcription elongation by RNA polymerase I is linked to efficient rRNA processing and ribosome assembly. Molecular Cell. 26: 217-29. PMID 17466624 DOI: 10.1016/j.molcel.2007.04.007  0.96
2007 Dasgupta A, Sprouse RO, French S, Aprikian P, Hontz R, Juedes SA, Smith JS, Beyer AL, Auble DT. Regulation of rRNA synthesis by TATA-binding protein-associated factor Mot1. Molecular and Cellular Biology. 27: 2886-96. PMID 17296733 DOI: 10.1128/MCB.00054-07  0.96
2007 French SL, Santangelo TJ, Beyer AL, Reeve JN. Transcription and translation are coupled in Archaea. Molecular Biology and Evolution. 24: 893-5. PMID 17237472 DOI: 10.1093/molbev/msm007  0.96
2006 Schneider DA, French SL, Osheim YN, Bailey AO, Vu L, Dodd J, Yates JR, Beyer AL, Nomura M. RNA polymerase II elongation factors Spt4p and Spt5p play roles in transcription elongation by RNA polymerase I and rRNA processing. Proceedings of the National Academy of Sciences of the United States of America. 103: 12707-12. PMID 16908835 DOI: 10.1073/pnas.0605686103  0.96
2006 Bleichert F, Granneman S, Osheim YN, Beyer AL, Baserga SJ. The PINc domain protein Utp24, a putative nuclease, is required for the early cleavage steps in 18S rRNA maturation. Proceedings of the National Academy of Sciences of the United States of America. 103: 9464-9. PMID 16769905 DOI: 10.1073/pnas.0603673103  0.96
2006 Oakes ML, Siddiqi I, French SL, Vu L, Sato M, Aris JP, Beyer AL, Nomura M. Role of histone deacetylase Rpd3 in regulating rRNA gene transcription and nucleolar structure in yeast. Molecular and Cellular Biology. 26: 3889-901. PMID 16648483 DOI: 10.1128/MCB.26.10.3889-3901.2006  0.96
2005 Tongaonkar P, French SL, Oakes ML, Vu L, Schneider DA, Beyer AL, Nomura M. Histones are required for transcription of yeast rRNA genes by RNA polymerase I. Proceedings of the National Academy of Sciences of the United States of America. 102: 10129-34. PMID 16002464 DOI: 10.1073/pnas.0504563102  0.96
2005 Hoang T, Peng WT, Vanrobays E, Krogan N, Hiley S, Beyer AL, Osheim YN, Greenblatt J, Hughes TR, Lafontaine DL. Esf2p, a U3-associated factor required for small-subunit processome assembly and compaction. Molecular and Cellular Biology. 25: 5523-34. PMID 15964808 DOI: 10.1128/MCB.25.13.5523-5534.2005  0.96
2004 Osheim YN, French SL, Keck KM, Champion EA, Spasov K, Dragon F, Baserga SJ, Beyer AL. Pre-18S ribosomal RNA is structurally compacted into the SSU processome prior to being cleaved from nascent transcripts in Saccharomyces cerevisiae. Molecular Cell. 16: 943-54. PMID 15610737 DOI: 10.1016/j.molcel.2004.11.031  0.96
2004 Gallagher JE, Dunbar DA, Granneman S, Mitchell BM, Osheim Y, Beyer AL, Baserga SJ. RNA polymerase I transcription and pre-rRNA processing are linked by specific SSU processome components. Genes & Development. 18: 2506-17. PMID 15489292 DOI: 10.1101/gad.1226604  0.96
2004 Johnson JS, Osheim YN, Xue Y, Emanuel MR, Lewis PW, Bankovich A, Beyer AL, Engel DA. Adenovirus protein VII condenses DNA, represses transcription, and associates with transcriptional activator E1A. Journal of Virology. 78: 6459-68. PMID 15163739 DOI: 10.1128/JVI.78.12.6459-6468.2004  0.96
2004 Prescott EM, Osheim YN, Jones HS, Alen CM, Roan JG, Reeder RH, Beyer AL, Proudfoot NJ. Transcriptional termination by RNA polymerase I requires the small subunit Rpa12p. Proceedings of the National Academy of Sciences of the United States of America. 101: 6068-73. PMID 15073335 DOI: 10.1073/pnas.0401393101  0.96
2004 Claypool JA, French SL, Johzuka K, Eliason K, Vu L, Dodd JA, Beyer AL, Nomura M. Tor pathway regulates Rrn3p-dependent recruitment of yeast RNA polymerase I to the promoter but does not participate in alteration of the number of active genes. Molecular Biology of the Cell. 15: 946-56. PMID 14595104 DOI: 10.1091/mbc.E03-08-0594  0.96
2003 French SL, Osheim YN, Cioci F, Nomura M, Beyer AL. In exponentially growing Saccharomyces cerevisiae cells, rRNA synthesis is determined by the summed RNA polymerase I loading rate rather than by the number of active genes. Molecular and Cellular Biology. 23: 1558-68. PMID 12588976 DOI: 10.1128/MCB.23.5.1558-1568.2003  0.96
2002 Sandmeier JJ, French S, Osheim Y, Cheung WL, Gallo CM, Beyer AL, Smith JS. RPD3 is required for the inactivation of yeast ribosomal DNA genes in stationary phase. The Embo Journal. 21: 4959-68. PMID 12234935 DOI: 10.1093/emboj/cdf498  0.96
2002 Osheim YN, Sikes ML, Beyer AL. EM visualization of Pol II genes in Drosophila: most genes terminate without prior 3' end cleavage of nascent transcripts. Chromosoma. 111: 1-12. PMID 12068918 DOI: 10.1007/s00412-002-0183-7  0.96
2002 Dragon F, Gallagher JE, Compagnone-Post PA, Mitchell BM, Porwancher KA, Wehner KA, Wormsley S, Settlage RE, Shabanowitz J, Osheim Y, Beyer AL, Hunt DF, Baserga SJ. A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis. Nature. 417: 967-70. PMID 12068309 DOI: 10.1038/nature00769  0.96
1999 Osheim YN, Proudfoot NJ, Beyer AL. EM visualization of transcription by RNA polymerase II: downstream termination requires a poly(A) signal but not transcript cleavage. Molecular Cell. 3: 379-87. PMID 10198640 DOI: 10.1016/S1097-2765(00)80465-7  0.96
1998 McCracken S, Rosonina E, Fong N, Sikes M, Beyer A, O'Hare K, Shuman S, Bentley D. Role of RNA polymerase II carboxy-terminal domain in coordinating transcription with RNA processing. Cold Spring Harbor Symposia On Quantitative Biology. 63: 301-9. PMID 10384294  0.96
1998 Zu K, Sikes ML, Beyer AL. Separable roles in vivo for the two RNA binding domains of Drosophila A1-hnRNP homolog. Rna (New York, N.Y.). 4: 1585-98. PMID 9848655 DOI: 10.1017/S135583829898102X  0.96
1998 Osheim YN, Beyer AL. EM visualization of transcriptionally active genes after injection into Xenopus oocyte nuclei. Methods in Cell Biology. 53: 471-96. PMID 9348521  0.96
1996 Zu K, Sikes ML, Haynes SR, Beyer AL. Altered levels of the Drosophila HRB87F/hrp36 hnRNP protein have limited effects on alternative splicing in vivo. Molecular Biology of the Cell. 7: 1059-73. PMID 8862520  0.96
1996 Osheim YN, Mougey EB, Windle J, Anderson M, O'Reilly M, Miller OL, Beyer A, Sollner-Webb B. Metazoan rDNA enhancer acts by making more genes transcriptionally active. The Journal of Cell Biology. 133: 943-54. PMID 8655586 DOI: 10.1083/jcb.133.5.943  0.96
1995 Shen J, Zu K, Cass CL, Beyer AL, Hirsh J. Exon skipping by overexpression of a Drosophila heterogeneous nuclear ribonucleoprotein in vivo. Proceedings of the National Academy of Sciences of the United States of America. 92: 1822-5. PMID 7892184 DOI: 10.1073/pnas.92.6.1822  0.96
1994 Beyer A, Sikes M, Osheim Y. Chapter 32 EM Methods for Visualization of Genetic Activity from Disrupted Nuclei Methods in Cell Biology. 44: 613-630. DOI: 10.1016/S0091-679X(08)60935-8  0.96
1993 Amero SA, Matunis MJ, Matunis EL, Hockensmith JW, Raychaudhuri G, Beyer AL. A unique ribonucleoprotein complex assembles preferentially on ecdysone-responsive sites in Drosophila melanogaster. Molecular and Cellular Biology. 13: 5323-30. PMID 8355684  0.96
1993 Mougey EB, O'Reilly M, Osheim Y, Miller OL, Beyer A, Sollner-Webb B. The terminal balls characteristic of eukaryotic rRNA transcription units in chromatin spreads are rRNA processing complexes. Genes & Development. 7: 1609-19. PMID 8339936  0.96
1992 Raychaudhuri G, Haynes SR, Beyer AL. Heterogeneous nuclear ribonucleoprotein complexes and proteins in Drosophila melanogaster. Molecular and Cellular Biology. 12: 847-55. PMID 1732749  0.96
1992 Amero SA, Raychaudhuri G, Cass CL, van Venrooij WJ, Habets WJ, Krainer AR, Beyer AL. Independent deposition of heterogeneous nuclear ribonucleoproteins and small nuclear ribonucleoprotein particles at sites of transcription. Proceedings of the National Academy of Sciences of the United States of America. 89: 8409-13. PMID 1388268  0.96
1991 Weiden M, Osheim YN, Beyer AL, Van Der Ploeg LHT. Chromosome structure: DNA nucleotide sequence elements of a subset of the minichromosomes of the protozoan Trypanosoma brucei Molecular and Cellular Biology. 11: 3823-3834. PMID 2072894  0.96
1991 Osheim YN, Beyer AL. EM analysis of Drosophila chorion genes: Amplification, transcription termination and RNA splicing Electron Microscopy Reviews. 4: 111-128. PMID 1908335 DOI: 10.1016/0892-0354(91)90018-8  0.96
1991 Amero SA, Elgin SC, Beyer AL. A unique zinc finger protein is associated preferentially with active ecdysone-responsive loci in Drosophila. Genes & Development. 5: 188-200. PMID 1899840  0.96
1991 Haynes SR, Johnson D, Raychaudhuri G, Beyer AL. The Drosophila Hrb87F gene encodes a new member of the A and B hnRNP protein group. Nucleic Acids Research. 19: 25-31. PMID 1849257  0.96
1991 Beyer AL, Osheim YN. Visualization of RNA transcription and processing Seminars in Cell Biology. 2: 131-140. PMID 1720682  0.96
1990 Haynes SR, Raychaudhuri G, Johnson D, Amero S, Beyer AL. The Drosophila Hrb loci: a family of hnRNA binding proteins. Molecular Biology Reports. 14: 93-4. PMID 2113991 DOI: 10.1007/BF00360430  0.96
1990 Haynes SR, Raychaudhuri G, Beyer AL. The Drosophila Hrb98DE locus encodes four protein isoforms homologous to the A1 protein of mammalian heterogeneous nuclear ribonucleoprotein complexes. Molecular and Cellular Biology. 10: 316-23. PMID 2104660  0.96
1989 Osheim YN, Beyer AL. Electron microscopy of ribonucleoprotein complexes on nascent RNA using Miller chromatin spreading method Methods in Enzymology. 180: 481-509. PMID 2482429 DOI: 10.1016/0076-6879(89)80119-3  0.96
1988 Beyer AL, Osheim YN. Splice site selection, rate of splicing, and alternative splicing on nascent transcripts Genes & Development. 2: 754-765. PMID 3138163  0.96
1988 Osheim YN, Miller OL, Beyer AL. Visualization of Drosophila melanogaster chorion genes undergoing amplification. Molecular and Cellular Biology. 8: 2811-21. PMID 3136323  0.96
1986 Osheim YN, Miller OL, Beyer AL. Two Drosophila chorion genes terminate transcription in discrete regions near their poly(A) sites. The Embo Journal. 5: 3591-6. PMID 3104029  0.96
1985 Osheim YN, Miller OL, Beyer AL. RNP particles at splice junction sequences on Drosophila chorion transcripts. Cell. 43: 143-51. PMID 3935315 DOI: 10.1016/0092-8674(85)90019-4  0.96
1983 Beyer A. Ultrastructural analysis of the ribonucleoprotein structure of nascent hnRNA Molecular Biology Reports. 9: 49-58. PMID 6412068 DOI: 10.1007/BF00777473  0.96
1981 Beyer AL, Bouton AH, Hodge LD, Miller OL. Visualization of the major late R strand transcription unit of adenovirus serotype 2. Journal of Molecular Biology. 147: 269-95. PMID 7288880 DOI: 10.1016/0022-2836(81)90441-1  0.96
1981 Beyer AL, Bouton AH, Miller OL. Correlation of hnRNP structure and nascent transcript cleavage. Cell. 26: 155-65. PMID 6174239 DOI: 10.1016/0092-8674(81)90299-3  0.96
1980 Martin K, Osheim YN, Beyer AL, Miller OL. Visualization of transcriptional activity during xenopus iaevis oogenesis. Results and Problems in Cell Differentiation. 11: 37-44. PMID 7003671  0.96
1980 Beyer AL, Miller OL, McKnight SL. Ribonucleoprotein structure in nascent hnRNA is nonrandom and sequence-dependent. Cell. 20: 75-84. PMID 6771017 DOI: 10.1016/0092-8674(80)90236-6  0.96
1978 Hardy K, Chiu JF, Beyer AL, Hnilica LS. Immunological properties of fractionated avian erythroid nuclei Journal of Biological Chemistry. 253: 5825-5831. PMID 670233  0.96
1977 Beyer AL, Christensen ME, Walker BW, LeStourgeon WM. Identification and characterization of the packaging proteins of core 40S hnRNP particles Cell. 11: 127-138. PMID 872217 DOI: 10.1016/0092-8674(77)90323-3  0.96
1977 Christensen ME, Beyer AL, Walker B, LeStourgeon WM. Identification of NG, NG-dimethylarginine in a nuclear protein from the lower eukaryote Physarum polycephalum homologous to the major proteins of mammalian 40S ribonucleoprotein particles Biochemical and Biophysical Research Communications. 74: 621-629. PMID 556939 DOI: 10.1016/0006-291X(77)90348-5  0.96
1977 LeStourgeon WM, Beyer AL, Christensen ME, Walker BW, Poupore SM, Daniels LP. The packaging proteins of core hnRNP particles and the maintenance of proliferative cell states Cold Spring Harbor Symposia On Quantitative Biology. 42: 885-898. PMID 277323  0.96
1977 LeStourgeon WM, Beyer AL. The rapid isolation, high resolution electrophoretic characterization, and purification of nuclear proteins Methods in Cell Biology. 387-406.  0.96
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