Clinton C. MacDonald - Publications

Affiliations: 
Texas Tech University, Lubbock, TX 
Area:
Molecular Biology, Cell Biology

48 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Miller SC, MacDonald CC, Kellogg MK, Karamysheva ZN, Karamyshev AL. Specialized Ribosomes in Health and Disease. International Journal of Molecular Sciences. 24. PMID 37047306 DOI: 10.3390/ijms24076334  0.335
2022 Masoumzadeh E, Grozdanov PN, Jetly A, MacDonald CC, Latham MP. Electrostatic Interactions between CSTF2 and pre-mRNA Drive Cleavage and Polyadenylation. Biophysical Journal. 121: 607-619. PMID 35090899 DOI: 10.1016/j.bpj.2022.01.005  0.318
2020 Grozdanov PN, Masoumzadeh E, Kalscheuer VM, Bienvenu T, Billuart P, Delrue MA, Latham MP, MacDonald CC. A missense mutation in the CSTF2 gene that impairs the function of the RNA recognition motif and causes defects in 3' end processing is associated with intellectual disability in humans. Nucleic Acids Research. PMID 32816001 DOI: 10.1093/Nar/Gkaa689  0.463
2020 Yu P, Li J, Deng SP, Zhang F, Grozdanov PN, Chin EWM, Martin SD, Vergnes L, Islam MS, Sun D, LaSalle JM, McGee SL, Goh E, MacDonald CC, Jin P. Publisher Correction: Integrated analysis of a compendium of RNA-Seq datasets for splicing factors. Scientific Data. 7: 267. PMID 32769981 DOI: 10.1038/S41597-020-00607-X  0.339
2020 Yu P, Li J, Deng SP, Zhang F, Grozdanov PN, Chin EWM, Martin SD, Vergnes L, Islam MS, Sun D, LaSalle JM, McGee SL, Goh E, MacDonald CC, Jin P. Integrated analysis of a compendium of RNA-Seq datasets for splicing factors. Scientific Data. 7: 178. PMID 32546682 DOI: 10.1038/S41597-020-0514-7  0.434
2020 Masoumzadeh E, Latham M, MacDonald C, Grozdanov P. Study of Self-Association of Human CstF-64 RNA Recognition Motif Biophysical Journal. 118: 520a. DOI: 10.1016/J.Bpj.2019.11.2862  0.321
2019 MacDonald CC. Tissue-specific mechanisms of alternative polyadenylation: Testis, brain, and beyond (2018 update). Wiley Interdisciplinary Reviews. Rna. e1526. PMID 30816016 DOI: 10.1002/Wrna.1526  0.51
2018 Grozdanov PN, Masoumzadeh E, Latham MP, MacDonald CC. The structural basis of CstF-77 modulation of cleavage and polyadenylation through stimulation of CstF-64 activity. Nucleic Acids Research. PMID 30257008 DOI: 10.1093/Nar/Gky862  0.445
2018 Karamysheva ZN, Tikhonova EB, Grozdanov PN, Huffman JC, Baca KR, Karamyshev A, Denison RB, MacDonald CC, Zhang K, Karamyshev AL. Polysome Profiling in Leishmania, Human Cells and Mouse Testis. Journal of Visualized Experiments : Jove. PMID 29683462 DOI: 10.3791/57600  0.515
2018 Grozdanov PN, Li J, Yu P, Yan W, MacDonald CC. Cstf2t Regulates expression of histones and histone-like proteins in male germ cells. Andrology. PMID 29673127 DOI: 10.1111/Andr.12488  0.569
2017 MacDonald CC, Grozdanov PN. Nonsense in the Testis: Multiple Roles for Nonsense-Mediated Decay Revealed in Male Reproduction. Biology of Reproduction. PMID 28444146 DOI: 10.1093/Biolre/Iox033  0.449
2016 Harris JC, Martinez JM, Grozdanov PN, Bergeson SE, Grammas P, MacDonald CC. The Cstf2t Polyadenylation Gene Plays a Sex-Specific Role in Learning Behaviors in Mice. Plos One. 11: e0165976. PMID 27812195 DOI: 10.1371/Journal.Pone.0165976  0.453
2016 Grozdanov PN, Amatullah A, Graber JH, MacDonald CC. TauCstF-64 Mediates Correct mRNA Polyadenylation and Splicing of Activator and Repressor Isoforms of the Cyclic AMP-Responsive Element Modulator (CREM) in Mouse Testis. Biology of Reproduction. 94: 34. PMID 26700942 DOI: 10.1095/Biolreprod.115.134684  0.504
2016 Grozdanov PN, Amatullah A, Graber JH, MacDonald CC. TauCstF-64 mediates correct mRNA polyadenylation and splicing of activator and repressor isoforms of the cyclic AMP-responsive element modulator (CREM) in mouse testis Biology of Reproduction. 94. DOI: 10.1095/biolreprod.115.134684  0.415
2015 Grozdanov PN, MacDonald CC. Generation of plasmid vectors expressing FLAG-tagged proteins under the regulation of human elongation factor-1α promoter using Gibson assembly. Journal of Visualized Experiments : Jove. PMID 25742071 DOI: 10.3791/52235  0.341
2014 Youngblood BA, MacDonald CC. CstF-64 is necessary for endoderm differentiation resulting in cardiomyocyte defects. Stem Cell Research. 13: 413-21. PMID 25460602 DOI: 10.1016/J.Scr.2014.09.005  0.35
2014 Youngblood BA, Grozdanov PN, MacDonald CC. CstF-64 supports pluripotency and regulates cell cycle progression in embryonic stem cells through histone 3′ end processing Nucleic Acids Research. 42: 8330-8342. PMID 24957598 DOI: 10.1093/Nar/Gku551  0.423
2014 Alfano R, Youngblood BA, Zhang D, Huang N, MacDonald CC. Human leukemia inhibitory factor produced by the ExpressTec method from rice (Oryza sativa L.) is active in human neural stem cells and mouse induced pluripotent stem cells. Bioengineered. 5: 180-5. PMID 24776984 DOI: 10.4161/Bioe.28996  0.355
2014 Grozdanov PN, Macdonald CC. High-throughput sequencing of RNA isolated by cross-linking and immunoprecipitation (HITS-CLIP) to determine sites of binding of CstF-64 on nascent RNAs. Methods in Molecular Biology (Clifton, N.J.). 1125: 187-208. PMID 24590791 DOI: 10.1007/978-1-62703-971-0_17  0.452
2014 Hockert JA, Macdonald CC. The stem-loop luciferase assay for polyadenylation (SLAP) method for determining CstF-64-dependent polyadenylation activity. Methods in Molecular Biology (Clifton, N.J.). 1125: 109-17. PMID 24590783 DOI: 10.1007/978-1-62703-971-0_9  0.44
2014 Youngblood BA, Alfano R, Pettit SC, Zhang D, Dallmann HG, Huang N, Macdonald CC. Application of recombinant human leukemia inhibitory factor (LIF) produced in rice (Oryza sativa L.) for maintenance of mouse embryonic stem cells. Journal of Biotechnology. 172: 67-72. PMID 24380819 DOI: 10.1016/J.Jbiotec.2013.12.012  0.354
2013 Shankarling GS, MacDonald CC. Polyadenylation site-specific differences in the activity of the neuronal βCstF-64 protein in PC-12 cells. Gene. 529: 220-7. PMID 23948079 DOI: 10.1016/J.Gene.2013.08.007  0.482
2012 Li W, Yeh HJ, Shankarling GS, Ji Z, Tian B, MacDonald CC. The Ï„CstF-64 polyadenylation protein controls genome expression in testis. Plos One. 7: e48373. PMID 23110235 DOI: 10.1371/Journal.Pone.0048373  0.516
2011 Hockert KJ, Martincic K, Mendis-Handagama SM, Borghesi LA, Milcarek C, Dass B, MacDonald CC. Spermatogenetic but not immunological defects in mice lacking the τCstF-64 polyadenylation protein. Journal of Reproductive Immunology. 89: 26-37. PMID 21489638 DOI: 10.1016/J.Jri.2011.01.018  0.745
2010 MacDonald CC, McMahon KW. Tissue-specific mechanisms of alternative polyadenylation: testis, brain, and beyond. Wiley Interdisciplinary Reviews. Rna. 1: 494-501. PMID 21956945 DOI: 10.1002/Wrna.29  0.481
2010 Tardif S, Akrofi AS, Dass B, Hardy DM, MacDonald CC. Infertility with impaired zona pellucida adhesion of spermatozoa from mice lacking TauCstF-64. Biology of Reproduction. 83: 464-72. PMID 20463354 DOI: 10.1095/Biolreprod.109.083238  0.77
2010 Hockert JA, Yeh HJ, MacDonald CC. The hinge domain of the cleavage stimulation factor protein CstF-64 is essential for CstF-77 interaction, nuclear localization, and polyadenylation. The Journal of Biological Chemistry. 285: 695-704. PMID 19887456 DOI: 10.1074/Jbc.M109.061705  0.465
2009 Shankarling GS, Coates PW, Dass B, Macdonald CC. A family of splice variants of CstF-64 expressed in vertebrate nervous systems. Bmc Molecular Biology. 10: 22. PMID 19284619 DOI: 10.1186/1471-2199-10-22  0.748
2007 Dass B, Tardif S, Ji YP, Tian B, Weitlauf HM, Hess RA, Carnes K, Griswold MD, Small CL, MacDonald CC. Loss of polyadenylation protein τCstF-64 causes spermatogenic defects and male infertility Proceedings of the National Academy of Sciences of the United States of America. 104: 20374-20379. PMID 18077340 DOI: 10.1073/Pnas.0707589104  0.795
2007 Liu D, Brockman JM, Dass B, Hutchins LN, Singh P, McCarrey JR, MacDonald CC, Graber JH. Systematic variation in mRNA 3'-processing signals during mouse spermatogenesis. Nucleic Acids Research. 35: 234-46. PMID 17158511 DOI: 10.1093/Nar/Gkl919  0.764
2007 Monarez RR, MacDonald CC, Dass B. Polyadenylation proteins CstF-64 and tauCstF-64 exhibit differential binding affinities for RNA polymers. The Biochemical Journal. 401: 651-8. PMID 17029590 DOI: 10.1042/Bj20061097  0.749
2006 D'mello V, Lee JY, MacDonald CC, Tian B. Alternative mRNA polyadenylation can potentially affect detection of gene expression by affymetrix genechip arrays. Applied Bioinformatics. 5: 249-53. PMID 17140271 DOI: 10.2165/00822942-200605040-00007  0.456
2006 McMahon KW, Hirsch BA, MacDonald CC. Differences in polyadenylation site choice between somatic and male germ cells. Bmc Molecular Biology. 7: 35. PMID 17038175 DOI: 10.1186/1471-2199-7-35  0.448
2005 Huber Z, Monarez RR, Dass B, MacDonald CC. The mRNA encoding tauCstF-64 is expressed ubiquitously in mouse tissues. Annals of the New York Academy of Sciences. 1061: 163-72. PMID 16467265 DOI: 10.1196/Annals.1336.017  0.77
2004 Wallace AM, Denison TL, Attaya EN, MacDonald CC. Developmental distribution of the polyadenylation protein CstF-64 and the variant tauCstF-64 in mouse and rat testis. Biology of Reproduction. 70: 1080-7. PMID 14681198 DOI: 10.1095/Biolreprod.103.022947  0.521
2003 MacDonald CC, McMahon KW. The flowers that bloom in the spring: RNA processing and seasonal flowering. Cell. 113: 671-2. PMID 12809597 DOI: 10.1016/S0092-8674(03)00426-4  0.437
2002 Dass B, McDaniel L, Schultz RA, Attaya E, MacDonald CC. The gene CSTF2T, encoding the human variant CstF-64 polyadenylation protein tauCstF-64, lacks introns and may be associated with male sterility. Genomics. 80: 509-14. PMID 12408968 DOI: 10.1006/Geno.2002.6862  0.759
2002 MacDonald CC, Redondo JL. Reexamining the polyadenylation signal: were we wrong about AAUAAA? Molecular and Cellular Endocrinology. 190: 1-8. PMID 11997173 DOI: 10.1016/S0303-7207(02)00044-8  0.536
2001 Dass B, Attaya EN, Michelle Wallace A, MacDonald CC. Overexpression of the CstF-64 and CPSF-160 polyadenylation protein messenger RNAs in mouse male germ cells. Biology of Reproduction. 64: 1722-9. PMID 11369601 DOI: 10.1095/Biolreprod64.6.1722  0.781
2001 Dass B, McMahon KW, Jenkins NA, Gilbert DJ, Copeland NG, MacDonald CC. The Gene for a Variant Form of the Polyadenylation Protein CstF-64 Is on Chromosome 19 and Is Expressed in Pachytene Spermatocytes in Mice Journal of Biological Chemistry. 276: 8044-8050. PMID 11113135 DOI: 10.1074/Jbc.M009091200  0.772
2000 Veraldi KL, Edwalds-Gilbert G, MacDonald CC, Wallace AM, Milcarek C. Isolation and characterization of polyadenylation complexes assembled in vitro. Rna (New York, N.Y.). 6: 768-77. PMID 10836797 DOI: 10.1017/S135583820099246X  0.429
1999 Wallace AM, Dass B, Ravnik SE, Tonk V, Jenkins NA, Gilbert DJ, Copeland NG, MacDonald CC. Two distinct forms of the 64,000 Mr protein of the cleavage stimulation factor are expressed in mouse male germ cells. Proceedings of the National Academy of Sciences of the United States of America. 96: 6763-8. PMID 10359786 DOI: 10.1073/Pnas.96.12.6763  0.777
1995 Chen F, MacDonald CC, Wilusz J. Cleavage site determinants in the mammalian polyadenylation signal. Nucleic Acids Research. 23: 2614-20. PMID 7651822 DOI: 10.1093/Nar/23.14.2614  0.322
1994 Macdonald CC, Wilusz J, Shenk T. The 64-kilodalton subunit of the CstF polyadenylation factor binds to pre-mRNAs downstream of the cleavage site and influences cleavage site location Molecular and Cellular Biology. 14: 6647-6654. PMID 7935383 DOI: 10.1128/Mcb.14.10.6647  0.411
1992 Takagaki Y, MacDonald CC, Shenk T, Manley JL. The human 64-kDa polyadenylylation factor contains a ribonucleoprotein-type RNA binding domain and unusual auxiliary motifs. Proceedings of the National Academy of Sciences of the United States of America. 89: 1403-7. PMID 1741396 DOI: 10.1073/Pnas.89.4.1403  0.434
1992 Niwa M, MacDonald CC, Berget SM. Are vertebrate exons scanned during splice-site selection? Nature. 360: 277-80. PMID 1359430 DOI: 10.1038/360277A0  0.331
1990 Binder R, MacDonald CC, Burch JB, Lazier CB, Williams DL. Expression of endogenous and transfected apolipoprotein II and vitellogenin II genes in an estrogen responsive chicken liver cell line. Molecular Endocrinology (Baltimore, Md.). 4: 201-8. PMID 2330000 DOI: 10.1210/Mend-4-2-201  0.424
1990 Takagaki Y, Manley JL, MacDonald CC, Wilusz J, Shenk T. A multisubunit factor, CstF, is required for polyadenylation of mammalian pre-mRNAs. Genes & Development. 4: 2112-20. PMID 1980119 DOI: 10.1101/Gad.4.12A.2112  0.485
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