Theordore G. Clark - Publications

Affiliations: 
Cornell University, Ithaca, NY, United States 
Area:
Immunology, Veterinary Science Biology, Molecular Biology

15 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Kanji A, Hasan Z, Ali A, McNerney R, Mallard K, Coll F, Hill-Cawthorne G, Nair M, Clark TG, Zaver A, Jafri S, Hasan R. Characterization of genomic variations in SNPs of PE_PGRS genes reveals deletions and insertions in extensively drug resistant (XDR) M. tuberculosis strains from Pakistan. International Journal of Mycobacteriology. 4: 73-9. PMID 26655202 DOI: 10.1016/j.ijmyco.2014.11.049  0.306
2014 Mobegi VA, Duffy CW, Amambua-Ngwa A, Loua KM, Laman E, Nwakanma DC, MacInnis B, Aspeling-Jones H, Murray L, Clark TG, Kwiatkowski DP, Conway DJ. Genome-wide analysis of selection on the malaria parasite Plasmodium falciparum in West African populations of differing infection endemicity. Molecular Biology and Evolution. 31: 1490-9. PMID 24644299 DOI: 10.1093/molbev/msu106  0.302
2014 Assefa SA, Preston MD, Campino S, Ocholla H, Sutherland CJ, Clark TG. estMOI: estimating multiplicity of infection using parasite deep sequencing data. Bioinformatics (Oxford, England). 30: 1292-4. PMID 24443379 DOI: 10.1093/bioinformatics/btu005  0.306
2013 Borrmann S, Straimer J, Mwai L, Abdi A, Rippert A, Okombo J, Muriithi S, Sasi P, Kortok MM, Lowe B, Campino S, Assefa S, Auburn S, Manske M, Maslen G, ... ... Clark TG, et al. Genome-wide screen identifies new candidate genes associated with artemisinin susceptibility in Plasmodium falciparum in Kenya. Scientific Reports. 3: 3318. PMID 24270944 DOI: 10.1038/srep03318  0.308
2012 Preston MD, Manske M, Horner N, Assefa S, Campino S, Auburn S, Zongo I, Ouedraogo JB, Nosten F, Anderson T, Clark TG. VarB: a variation browsing and analysis tool for variants derived from next-generation sequencing data. Bioinformatics (Oxford, England). 28: 2983-5. PMID 22976080 DOI: 10.1093/bioinformatics/bts557  0.305
2011 Coyne RS, Hannick L, Shanmugam D, Hostetler JB, Brami D, Joardar VS, Johnson J, Radune D, Singh I, Badger JH, Kumar U, Saier M, Wang Y, Cai H, Gu J, ... ... Clark TG, et al. Comparative genomics of the pathogenic ciliate Ichthyophthirius multifiliis, its free-living relatives and a host species provide insights into adoption of a parasitic lifestyle and prospects for disease control. Genome Biology. 12: R100. PMID 22004680 DOI: 10.1186/Gb-2011-12-10-R100  0.356
2011 Robinson T, Campino SG, Auburn S, Assefa SA, Polley SD, Manske M, MacInnis B, Rockett KA, Maslen GL, Sanders M, Quail MA, Chiodini PL, Kwiatkowski DP, Clark TG, Sutherland CJ. Drug-resistant genotypes and multi-clonality in Plasmodium falciparum analysed by direct genome sequencing from peripheral blood of malaria patients. Plos One. 6: e23204. PMID 21853089 DOI: 10.1371/journal.pone.0023204  0.324
2011 Cassidy-Hanley DM, Cordonnier-Pratt MM, Pratt LH, Devine C, Mozammal Hossain M, Dickerson HW, Clark TG. Transcriptional profiling of stage specific gene expression in the parasitic ciliate Ichthyophthirius multifiliis Molecular and Biochemical Parasitology. 178: 29-39. PMID 21524669 DOI: 10.1016/J.Molbiopara.2011.04.004  0.382
2010 Daelemans C, Ritchie ME, Smits G, Abu-Amero S, Sudbery IM, Forrest MS, Campino S, Clark TG, Stanier P, Kwiatkowski D, Deloukas P, Dermitzakis ET, Tavaré S, Moore GE, Dunham I. High-throughput analysis of candidate imprinted genes and allele-specific gene expression in the human term placenta. Bmc Genetics. 11: 25. PMID 20403199 DOI: 10.1186/1471-2156-11-25  0.347
2010 Auburn S, Fry AE, Clark TG, Campino S, Diakite M, Green A, Richardson A, Jallow M, Sisay-Joof F, Pinder M, Molyneux ME, Taylor TE, Haldar K, Rockett KA, Kwiatkowski DP. Further evidence supporting a role for gs signal transduction in severe malaria pathogenesis. Plos One. 5: e10017. PMID 20386734 DOI: 10.1371/Journal.Pone.0010017  0.325
2010 Formigari A, Boldrin F, Santovito G, Cassidy-Hanley D, Clark TG, Piccinni E. Functional characterization of the 5'-upstream region of MTT5 metallothionein gene from Tetrahymena thermophila. Protist. 161: 71-7. PMID 19674934 DOI: 10.1016/j.protis.2009.06.002  0.357
2009 Sun HY, Noe J, Barber J, Coyne RS, Cassidy-Hanley D, Clark TG, Findly RC, Dickerson HW. Endosymbiotic bacteria in the parasitic ciliate Ichthyophthirius multifiliis. Applied and Environmental Microbiology. 75: 7445-52. PMID 19820157 DOI: 10.1128/AEM.00850-09  0.304
2002 Lin Y, Cheng G, Wang X, Clark TG. The use of synthetic genes for the expression of ciliate proteins in heterologous systems. Gene. 288: 85-94. PMID 12034497 DOI: 10.1016/S0378-1119(02)00433-X  0.61
2002 Lin Y, Lin TL, Wang CC, Wang X, Stieger K, Klopfleisch R, Clarke TG, Wang CC, Clark TG. Variation in primary sequence and tandem repeat copy number among i-antigens of Ichthyophthirius multifiliis. Molecular and Biochemical Parasitology. 120: 93-106. PMID 11849709 DOI: 10.1016/S0166-6851(01)00436-4  0.621
1999 Clark TG, Lin TL, Jackwood DA, Sherrill J, Lin Y, Dickerson HW. The gene for an abundant parasite coat protein predicts tandemly repetitive metal binding domains. Gene. 229: 91-100. PMID 10095108 DOI: 10.1016/S0378-1119(99)00029-3  0.598
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