| Year |
Citation |
Score |
| 2023 |
Kumar G, Gan HM, Popielarz H, Steele J, Parthasarathy A, Hudson AO, Savka MA. Endophytic bacteria associated with wild-type banana seed (): whole genome sequencing. Microbiology Resource Announcements. e0065023. PMID 37921458 DOI: 10.1128/MRA.00650-23 |
0.325 |
|
| 2020 |
Adegbaju MS, Morenikeji OB, Borrego EJ, Hudson AO, Thomas BN. Differential Evolution of α-Glucan Water Dikinase (GWD) in Plants. Plants (Basel, Switzerland). 9. PMID 32867090 DOI: 10.3390/plants9091101 |
0.337 |
|
| 2020 |
Steiner KK, Parthasarathy A, Wong NH, Cavanaugh NT, Chu J, Hudson AO. Isolation and whole-genome sequencing of Pseudomonas sp. RIT 623, a slow-growing bacterium endowed with antibiotic properties. Bmc Research Notes. 13: 370. PMID 32746897 DOI: 10.1186/S13104-020-05216-W |
0.375 |
|
| 2020 |
Reilly ER, Abajorga MK, Kiser C, Mohd Redzuan NH, Haidar Z, Adams LE, Diaz R, Pinzon JA, Hudson AO, Black LW, Hsia RC, Weintraub ST, Thomas JA. A Cut above the Rest: Characterization of the Assembly of a Large Viral Icosahedral Capsid. Viruses. 12. PMID 32635654 DOI: 10.3390/V12070725 |
0.307 |
|
| 2020 |
Weatherhead AW, Crowther JM, Horne CR, Meng Y, Coombes D, Currie MJ, Watkin SAJ, Adams LE, Parthasarathy A, Dobson RCJ, Hudson AO. Structure-Function Studies of the Antibiotic Target l,l-Diaminopimelate Aminotransferase from Reveal an Unusual Oligomeric Structure. Biochemistry. PMID 32478518 DOI: 10.1021/Acs.Biochem.0C00185 |
0.386 |
|
| 2020 |
Adams LE, Rynkiewicz P, Babbitt GA, Mortensen JS, North RA, Dobson RCJ, Hudson AO. Comparative Molecular Dynamics Simulations Provide Insight Into Antibiotic Interactions: A Case Study Using the Enzyme L,L-Diaminopimelate Aminotransferase (DapL). Frontiers in Molecular Biosciences. 7: 46. PMID 32274387 DOI: 10.3389/Fmolb.2020.00046 |
0.395 |
|
| 2019 |
Gan HM, Szegedi E, Fersi R, Chebil S, Kovács L, Kawaguchi A, Hudson AO, Burr TJ, Savka MA. Insight Into the Microbial Co-occurrence and Diversity of 73 Grapevine () Crown Galls Collected Across the Northern Hemisphere. Frontiers in Microbiology. 10: 1896. PMID 31456792 DOI: 10.3389/Fmicb.2019.01896 |
0.351 |
|
| 2019 |
Parthasarathy A, Savka MA, Hudson AO. The Synthesis and Role of β-Alanine in Plants. Frontiers in Plant Science. 10: 921. PMID 31379903 DOI: 10.3389/Fpls.2019.00921 |
0.368 |
|
| 2019 |
Crowther JM, Cross PJ, Oliver MR, Leeman MM, Bartl AJ, Weatherhead AW, North RA, Donovan KA, Griffin MDW, Suzuki H, Hudson AO, Kasanmascheff M, Dobson RCJ. Structure-function analyses of two plant -diaminopimelate decarboxylase isoforms reveal that active-site gating provides stereochemical control. The Journal of Biological Chemistry. PMID 30962284 DOI: 10.1074/Jbc.Ra118.006825 |
0.427 |
|
| 2018 |
Parthasarathy A, Cross PJ, Dobson RCJ, Adams LE, Savka MA, Hudson AO. A Three-Ring Circus: Metabolism of the Three Proteogenic Aromatic Amino Acids and Their Role in the Health of Plants and Animals. Frontiers in Molecular Biosciences. 5: 29. PMID 29682508 DOI: 10.3389/Fmolb.2018.00029 |
0.414 |
|
| 2017 |
Gan HM, Thomas BN, Cavanaugh NT, Morales GH, Mayers AN, Savka MA, Hudson AO. Whole genome sequencing of Rhodotorula mucilaginosa isolated from the chewing stick (Distemonanthus benthamianus): insights into Rhodotorula phylogeny, mitogenome dynamics and carotenoid biosynthesis. Peerj. 5: e4030. PMID 29158974 DOI: 10.7717/Peerj.4030 |
0.407 |
|
| 2017 |
Gan HM, Eng WWH, Barton MK, Adams LE, Samsudin NA, Bartl AJ, Hudson AO, Savka MA, Thomas JA. Whole-Genome Sequences of Salmonella enterica subsp. enterica Serovar Typhimurium Strains TT6675 and TT9097 Employed in the Isolation and Characterization of a Giant Phage Mutant Collection. Genome Announcements. 5. PMID 28839032 DOI: 10.1128/Genomea.00857-17 |
0.342 |
|
| 2017 |
Grant Pearce F, Hudson AO, Loomes K, Dobson RC. Dihydrodipicolinate Synthase: Structure, Dynamics, Function, and Evolution. Sub-Cellular Biochemistry. 83: 271-289. PMID 28271480 DOI: 10.1007/978-3-319-46503-6_10 |
0.455 |
|
| 2016 |
Cala AR, Nadeau MT, Abendroth J, Staker BL, Reers AR, Weatherhead AW, Dobson RC, Myler PJ, Hudson AO. The crystal structure of dihydrodipicolinate reductase from the human-pathogenic bacterium Bartonella henselae strain Houston-1 at 2.3 Å resolution. Acta Crystallographica. Section F, Structural Biology Communications. 72: 885-891. PMID 27917836 DOI: 10.1107/S2053230X16018525 |
0.341 |
|
| 2016 |
Gan HM, Dailey LK, Halliday N, Williams P, Hudson AO, Savka MA. Genome sequencing-assisted identification and the first functional validation of N-acyl-homoserine-lactone synthases from the Sphingomonadaceae family. Peerj. 4: e2332. PMID 27635318 DOI: 10.7717/Peerj.2332 |
0.383 |
|
| 2016 |
Thomas JA, Benítez Quintana AD, Bosch MA, Coll De Peña A, Aguilera E, Coulibaly A, Wu W, Osier MV, Hudson AO, Weintraub ST, Black LW. Identification of essential genes in the Salmonella phage SPN3US reveals novel insights into giant phage head structure and assembly. Journal of Virology. PMID 27605673 DOI: 10.1128/Jvi.01492-16 |
0.376 |
|
| 2016 |
Hudson AO, Harkness TC, Savka MA. Functional Complementation Analysis (FCA): A Laboratory Exercise Designed and Implemented to Supplement the Teaching of Biochemical Pathways. Journal of Visualized Experiments : Jove. PMID 27403640 DOI: 10.3791/53850 |
0.428 |
|
| 2016 |
Naqvi KF, Patin D, Wheatley MS, Savka MA, Dobson RC, Gan HM, Barreteau H, Blanot D, Mengin-Lecreulx D, Hudson AO. Identification and Partial Characterization of a Novel UDP-N-Acetylenolpyruvoylglucosamine Reductase/UDP-N-Acetylmuramate:l-Alanine Ligase Fusion Enzyme from Verrucomicrobium spinosum DSM 4136(T). Frontiers in Microbiology. 7: 362. PMID 27047475 DOI: 10.3389/Fmicb.2016.00362 |
0.441 |
|
| 2016 |
Lai WX, Gan HM, Hudson AO, Savka MA. Whole-Genome Sequencing Reveals a New Genospecies of Methylobacterium sp. GXS13, Isolated from Vitis vinifera L. Xylem Sap. Genome Announcements. 4. PMID 26847900 DOI: 10.1128/Genomea.01695-15 |
0.402 |
|
| 2016 |
Naqvi KF, Staker BL, Dobson RC, Serbzhinskiy D, Sankaran B, Myler PJ, Hudson AO. Cloning, expression, purification, crystallization and X-ray diffraction analysis of dihydrodipicolinate synthase from the human pathogenic bacterium Bartonella henselae strain Houston-1 at 2.1 Å resolution. Acta Crystallographica. Section F, Structural Biology Communications. 72: 2-9. PMID 26750477 DOI: 10.1107/S2053230X15023213 |
0.339 |
|
| 2016 |
Babbitt GA, Coppola EE, Alawad MA, Hudson AO. Can all heritable biology really be reduced to a single dimension? Gene. 578: 162-8. PMID 26723512 DOI: 10.1016/J.Gene.2015.12.043 |
0.326 |
|
| 2016 |
Coleman MG, Hudson AO. Isolation, Total Synthesis, and Biological Activities of 1-Aminocyclopropane-1-Carboxylic Acid (ACC) Containing Natural Compounds Studies in Natural Products Chemistry. 47: 405-430. DOI: 10.1016/B978-0-444-63603-4.00013-9 |
0.328 |
|
| 2015 |
Tran PN, Tan NE, Lee YP, Gan HM, Polter SJ, Dailey LK, Hudson AO, Savka MA. Whole-Genome Sequence and Classification of 11 Endophytic Bacteria from Poison Ivy (Toxicodendron radicans). Genome Announcements. 3. PMID 26586879 DOI: 10.1128/Genomea.01319-15 |
0.369 |
|
| 2015 |
Polter SJ, Caraballo AA, Lee YP, Eng WW, Gan HM, Wheatley MS, Savka MA, Thomas BN, Hudson AO. Isolation, Identification, Whole-Genome Sequencing, and Annotation of Four Bacillus Species, B. anthracis RIT375, B. circulans RIT379, B. altitudinis RIT380, and B. megaterium RIT381, from Internal Stem Tissue of the Insulin Plant Costus igneus. Genome Announcements. 3. PMID 26227604 DOI: 10.1128/Genomea.00847-15 |
0.371 |
|
| 2015 |
Eng WW, Gan HM, Gan HY, Hudson AO, Savka MA. Whole-Genome Sequence and Annotation of Octopine-Utilizing Pseudomonas kilonensis (Previously P. fluorescens) Strain 1855-344. Genome Announcements. 3. PMID 25977435 DOI: 10.1128/Genomea.00463-15 |
0.365 |
|
| 2015 |
Savka MA, Dailey L, Popova M, Mihaylova R, Merritt B, Masek M, Le P, Nor SR, Ahmad M, Hudson AO, Bankova V. Chemical composition and disruption of quorum sensing signaling in geographically diverse United States propolis. Evidence-Based Complementary and Alternative Medicine : Ecam. 2015: 472593. PMID 25960752 DOI: 10.1155/2015/472593 |
0.32 |
|
| 2015 |
Gan HY, Gan HM, Savka MA, Triassi AJ, Wheatley MS, Naqvi KF, Foxhall TE, Anauo MJ, Baldwin ML, Burkhardt RN, O'Bryon IG, Dailey LK, Busairi NI, Keith RC, Khair MH, ... ... Hudson AO, et al. Whole-Genome Sequencing and Annotation of Bacillus safensis RIT372 and Pseudomonas oryzihabitans RIT370 from Capsicum annuum (Bird's Eye Chili) and Capsicum chinense (Yellow Lantern Chili), Respectively. Genome Announcements. 3. PMID 25883290 DOI: 10.1128/Genomea.00288-15 |
0.37 |
|
| 2014 |
Gan HM, Gan HY, Ahmad NH, Aziz NA, Hudson AO, Savka MA. Whole genome sequencing and analysis reveal insights into the genetic structure, diversity and evolutionary relatedness of luxI and luxR homologs in bacteria belonging to the Sphingomonadaceae family. Frontiers in Cellular and Infection Microbiology. 4: 188. PMID 25621282 DOI: 10.3389/Fcimb.2014.00188 |
0.395 |
|
| 2014 |
Gan HY, Gan HM, Tarasco AM, Busairi NI, Barton HA, Hudson AO, Savka MA. Whole-Genome Sequences of Five Oligotrophic Bacteria Isolated from Deep within Lechuguilla Cave, New Mexico. Genome Announcements. 2. PMID 25377711 DOI: 10.1128/Genomea.01133-14 |
0.376 |
|
| 2014 |
Triassi AJ, Wheatley MS, Savka MA, Gan HM, Dobson RC, Hudson AO. L,L-diaminopimelate aminotransferase (DapL): a putative target for the development of narrow-spectrum antibacterial compounds. Frontiers in Microbiology. 5: 509. PMID 25309529 DOI: 10.3389/Fmicb.2014.00509 |
0.417 |
|
| 2014 |
Oliver MR, Crowther JM, Leeman MM, Kessans SA, North RA, Donovan KA, Griffin MD, Suzuki H, Hudson AO, Kasanmascheff M, Dobson RC. The purification, crystallization and preliminary X-ray diffraction analysis of two isoforms of meso-diaminopimelate decarboxylase from Arabidopsis thaliana. Acta Crystallographica. Section F, Structural Biology Communications. 70: 663-8. PMID 24817733 DOI: 10.1107/S2053230X14007699 |
0.434 |
|
| 2014 |
Gan HY, Gan HM, Savka MA, Triassi AJ, Wheatley MS, Smart LB, Fabio ES, Hudson AO. Whole-genome sequences of 13 endophytic bacteria isolated from shrub willow (salix) grown in geneva, new york. Genome Announcements. 2. PMID 24812212 DOI: 10.1128/Genomea.00288-14 |
0.382 |
|
| 2014 |
Gan HM, Triassi AJ, Wheatley MS, Savka MA, Hudson AO. High-Quality Draft Whole-Genome Sequences of Three Strains of Enterobacter Isolated from Jamaican Dioscorea cayenensis (Yellow Yam). Genome Announcements. 2. PMID 24625871 DOI: 10.1128/Genomea.00170-14 |
0.379 |
|
| 2014 |
McKinnie SM, Rodriguez-Lopez EM, Vederas JC, Crowther JM, Suzuki H, Dobson RC, Leustek T, Triassi AJ, Wheatley MS, Hudson AO. Differential response of orthologous L,L-diaminopimelate aminotransferases (DapL) to enzyme inhibitory antibiotic lead compounds. Bioorganic & Medicinal Chemistry. 22: 523-30. PMID 24268540 DOI: 10.1016/J.Bmc.2013.10.055 |
0.65 |
|
| 2013 |
Gan HM, Hudson AO, Rahman AY, Chan KG, Savka MA. Comparative genomic analysis of six bacteria belonging to the genus Novosphingobium: insights into marine adaptation, cell-cell signaling and bioremediation. Bmc Genomics. 14: 431. PMID 23809012 DOI: 10.1186/1471-2164-14-431 |
0.408 |
|
| 2013 |
McGroty SE, Pattaniyil DT, Patin D, Blanot D, Ravichandran AC, Suzuki H, Dobson RC, Savka MA, Hudson AO. Biochemical characterization of UDP-N-acetylmuramoyl-L-alanyl-D-glutamate: meso-2,6-diaminopimelate ligase (MurE) from Verrucomicrobium spinosum DSM 4136(T.). Plos One. 8: e66458. PMID 23785498 DOI: 10.1371/Journal.Pone.0066458 |
0.454 |
|
| 2013 |
North RA, Kessans SA, Atkinson SC, Suzuki H, Watson AJ, Burgess BR, Angley LM, Hudson AO, Varsani A, Griffin MD, Fairbanks AJ, Dobson RC. Cloning, expression, purification, crystallization and preliminary X-ray diffraction studies of N-acetylneuraminate lyase from methicillin-resistant Staphylococcus aureus. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 69: 306-12. PMID 23519810 DOI: 10.1107/S1744309113003060 |
0.353 |
|
| 2012 |
Gan HM, McGroty SE, Chew TH, Chan KG, Buckley LJ, Savka MA, Hudson AO. Whole-genome sequence of Enterobacter sp. strain SST3, an endophyte isolated from Jamaican sugarcane (Saccharum sp.) stalk tissue. Journal of Bacteriology. 194: 5981-2. PMID 23045495 DOI: 10.1128/Jb.01469-12 |
0.356 |
|
| 2012 |
Gan HM, Chew TH, Hudson AO, Savka MA. Genome sequence of Methylobacterium sp. strain GXF4, a xylem-associated bacterium isolated from Vitis vinifera L. grapevine. Journal of Bacteriology. 194: 5157-8. PMID 22933776 DOI: 10.1128/Jb.01201-12 |
0.382 |
|
| 2012 |
Gan HM, Chew TH, Hudson AO, Savka MA. Genome sequence of Novosphingobium sp. strain Rr 2-17, a nopaline crown gall-associated bacterium isolated from Vitis vinifera L. grapevine. Journal of Bacteriology. 194: 5137-8. PMID 22933764 DOI: 10.1128/Jb.01159-12 |
0.371 |
|
| 2012 |
Nachar VR, Savka FC, McGroty SE, Donovan KA, North RA, Dobson RC, Buckley LJ, Hudson AO. Genomic and Biochemical Analysis of the Diaminopimelate and Lysine Biosynthesis Pathway in Verrucomicrobium spinosum: Identification and Partial Characterization of L,L-Diaminopimelate Aminotransferase and UDP-N-Acetylmuramoylalanyl-D-glutamyl-2,6-meso-Diaminopimelate Ligase. Frontiers in Microbiology. 3: 183. PMID 22783236 DOI: 10.3389/Fmicb.2012.00183 |
0.47 |
|
| 2011 |
Bulman Z, Le P, Hudson AO, Savka MA. A novel property of propolis (bee glue): anti-pathogenic activity by inhibition of N-acyl-homoserine lactone mediated signaling in bacteria. Journal of Ethnopharmacology. 138: 788-97. PMID 22063726 DOI: 10.1016/J.Jep.2011.10.029 |
0.331 |
|
| 2011 |
Dobson RC, Girón I, Hudson AO. L,L-diaminopimelate aminotransferase from Chlamydomonas reinhardtii: a target for algaecide development. Plos One. 6: e20439. PMID 21633707 DOI: 10.1371/Journal.Pone.0020439 |
0.409 |
|
| 2011 |
Hudson AO, Klartag A, Gilvarg C, Dobson RC, Marques FG, Leustek T. Dual diaminopimelate biosynthesis pathways in Bacteroides fragilis and Clostridium thermocellum. Biochimica Et Biophysica Acta. 1814: 1162-8. PMID 21616177 DOI: 10.1016/J.Bbapap.2011.04.019 |
0.661 |
|
| 2011 |
Hudson AO, Girón I, Dobson RC. Crystallization and preliminary X-ray diffraction analysis of L,L-diaminopimelate aminotransferase (DapL) from Chlamydomonas reinhardtii. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 67: 140-3. PMID 21206046 DOI: 10.1107/S174430911004844X |
0.355 |
|
| 2010 |
Prabhu PR, Hudson AO. Identification and Partial Characterization of an L-Tyrosine Aminotransferase (TAT) from Arabidopsis thaliana. Biochemistry Research International. 2010: 549572. PMID 21188077 DOI: 10.1155/2010/549572 |
0.449 |
|
| 2009 |
Gan HM, Buckley L, Szegedi E, Hudson AO, Savka MA. Identification of an rsh gene from a Novosphingobium sp. necessary for quorum-sensing signal accumulation. Journal of Bacteriology. 191: 2551-60. PMID 19201802 DOI: 10.1128/Jb.01692-08 |
0.442 |
|
| 2008 |
Hudson AO, Gilvarg C, Leustek T. Biochemical and phylogenetic characterization of a novel diaminopimelate biosynthesis pathway in prokaryotes identifies a diverged form of LL-diaminopimelate aminotransferase. Journal of Bacteriology. 190: 3256-63. PMID 18310350 DOI: 10.1128/Jb.01381-07 |
0.68 |
|
| 2007 |
Martin MN, Saladores PH, Lambert E, Hudson AO, Leustek T. Localization of members of the gamma-glutamyl transpeptidase family identifies sites of glutathione and glutathione S-conjugate hydrolysis. Plant Physiology. 144: 1715-32. PMID 17545509 DOI: 10.1104/Pp.106.094409 |
0.625 |
|
| 2006 |
McCoy AJ, Adams NE, Hudson AO, Gilvarg C, Leustek T, Maurelli AT. L,L-diaminopimelate aminotransferase, a trans-kingdom enzyme shared by Chlamydia and plants for synthesis of diaminopimelate/lysine. Proceedings of the National Academy of Sciences of the United States of America. 103: 17909-14. PMID 17093042 DOI: 10.1073/Pnas.0608643103 |
0.679 |
|
| 2006 |
Hudson AO, Singh BK, Leustek T, Gilvarg C. An LL-diaminopimelate aminotransferase defines a novel variant of the lysine biosynthesis pathway in plants. Plant Physiology. 140: 292-301. PMID 16361515 DOI: 10.1104/Pp.105.072629 |
0.695 |
|
| 2005 |
Lee M, Martin MN, Hudson AO, Lee J, Muhitch MJ, Leustek T. Methionine and threonine synthesis are limited by homoserine availability and not the activity of homoserine kinase in Arabidopsis thaliana. The Plant Journal : For Cell and Molecular Biology. 41: 685-96. PMID 15703056 DOI: 10.1111/J.1365-313X.2004.02329.X |
0.686 |
|
| 2005 |
Hudson AO, Bless C, Macedo P, Chatterjee SP, Singh BK, Gilvarg C, Leustek T. Biosynthesis of lysine in plants: evidence for a variant of the known bacterial pathways. Biochimica Et Biophysica Acta. 1721: 27-36. PMID 15652176 DOI: 10.1016/J.Bbagen.2004.09.008 |
0.69 |
|
| 2002 |
Morgan CA, Hudson A, Konopka A, Nakatsu CH. Analyses of microbial activity in biomass-recycle reactors using denaturing gradient gel electrophoresis of 16S rDNA and 16S rRNA PCR products. Canadian Journal of Microbiology. 48: 333-41. PMID 12030706 DOI: 10.1139/W02-029 |
0.304 |
|
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