| Year |
Citation |
Score |
| 2023 |
Nickoloff JA, Jaiswal AS, Sharma N, Williamson EA, Tran MT, Arris D, Yang M, Hromas R. Cellular Responses to Widespread DNA Replication Stress. International Journal of Molecular Sciences. 24. PMID 38069223 DOI: 10.3390/ijms242316903 |
0.443 |
|
| 2023 |
Jaiswal AS, Kim HS, Schärer OD, Sharma N, Williamson EA, Srinivasan G, Phillips L, Kong K, Arya S, Misra A, Dutta A, Gupta Y, Walter CA, Burma S, Narayan S, ... ... Nickoloff JA, et al. EEPD1 promotes repair of oxidatively-stressed replication forks. Nar Cancer. 5: zcac044. PMID 36683914 DOI: 10.1093/narcan/zcac044 |
0.392 |
|
| 2022 |
Nickoloff JA, Sharma N, Taylor L, Allen SJ, Hromas R. Nucleases and Co-Factors in DNA Replication Stress Responses. Dna. 2: 68-85. PMID 36203968 DOI: 10.3390/dna2010006 |
0.462 |
|
| 2022 |
Nickoloff JA. Targeting Replication Stress Response Pathways to Enhance Genotoxic Chemo- and Radiotherapy. Molecules (Basel, Switzerland). 27. PMID 35897913 DOI: 10.3390/molecules27154736 |
0.36 |
|
| 2022 |
Nickoloff JA, Sharma N, Taylor L, Allen SJ, Lee SH, Hromas R. Metnase and EEPD1: DNA Repair Functions and Potential Targets in Cancer Therapy. Frontiers in Oncology. 12: 808757. PMID 35155245 DOI: 10.3389/fonc.2022.808757 |
0.495 |
|
| 2021 |
Nickoloff JA, Sharma N, Taylor L, Allen SJ, Hromas R. The Safe Path at the Fork: Ensuring Replication-Associated DNA Double-Strand Breaks are Repaired by Homologous Recombination. Frontiers in Genetics. 12: 748033. PMID 34646312 DOI: 10.3389/fgene.2021.748033 |
0.542 |
|
| 2021 |
Nickoloff JA, Taylor L, Sharma N, Kato TA. Exploiting DNA repair pathways for tumor sensitization, mitigation of resistance, and normal tissue protection in radiotherapy. Cancer Drug Resistance (Alhambra, Calif.). 4: 244-263. PMID 34337349 DOI: 10.20517/cdr.2020.89 |
0.452 |
|
| 2021 |
Nickoloff JA, Sharma N, Allen CP, Taylor L, Allen SJ, Jaiswal AS, Hromas R. Roles of Homologous Recombination in Response to Ionizing Radiation-Induced DNA Damage. International Journal of Radiation Biology. 1-33. PMID 34283012 DOI: 10.1080/09553002.2021.1956001 |
0.462 |
|
| 2021 |
Nickoloff JA. Toward Greater Precision in Cancer Radiotherapy. Cancer Research. 81: 3156-3157. PMID 34224374 DOI: 10.1158/0008-5472.CAN-21-0664 |
0.467 |
|
| 2020 |
Sharma N, Speed MC, Allen CP, Maranon DG, Williamson E, Singh S, Hromas R, Nickoloff JA. Distinct roles of structure-specific endonucleases EEPD1 and Metnase in replication stress responses. Nar Cancer. 2: zcaa008. PMID 32743552 DOI: 10.1093/narcan/zcaa008 |
0.416 |
|
| 2020 |
Nickoloff JA, Sharma N, Taylor L. Clustered DNA Double-Strand Breaks: Biological Effects and Relevance to Cancer Radiotherapy. Genes. 11. PMID 31952359 DOI: 10.3390/Genes11010099 |
0.493 |
|
| 2017 |
Nickoloff JA, Boss MK, Allen CP, LaRue SM. Translational research in radiation-induced DNA damage signaling and repair. Translational Cancer Research. 6: S875-S891. PMID 30574452 DOI: 10.21037/Tcr.2017.06.02 |
0.487 |
|
| 2017 |
Hromas R, Kim HS, Sidhu G, Williamson E, Jaiswal A, Totterdale TA, Nole J, Lee SH, Nickoloff JA, Kong KY. The endonuclease EEPD1 mediates synthetic lethality in RAD52-depleted BRCA1 mutant breast cancer cells. Breast Cancer Research : Bcr. 19: 122. PMID 29145865 DOI: 10.1186/S13058-017-0912-8 |
0.314 |
|
| 2017 |
Nickoloff JA. Paths from DNA damage and signaling to genome rearrangements via homologous recombination. Mutation Research. PMID 28779875 DOI: 10.1016/J.Mrfmmm.2017.07.008 |
0.574 |
|
| 2017 |
Allen CP, Hirakawa H, Nakajima NI, Moore S, Nie J, Sharma N, Sugiura M, Hoki Y, Araki R, Abe M, Okayasu R, Fujimori A, Nickoloff JA. Low- and High-LET Ionizing Radiation Induces Delayed Homologous Recombination that Persists for Two Weeks before Resolving. Radiation Research. PMID 28535128 DOI: 10.1667/Rr14748.1 |
0.411 |
|
| 2017 |
Nickoloff JA, Jones D, Lee SH, Williamson EA, Hromas R. Drugging the Cancers Addicted to DNA Repair. Journal of the National Cancer Institute. 109. PMID 28521333 DOI: 10.1093/Jnci/Djx059 |
0.479 |
|
| 2017 |
Lee Y, Sunada S, Hirakawa H, Fujimori A, Nickoloff JA, Okayasu R. TAS-116, a Novel Hsp90 Inhibitor, Selectively Enhances Radiosensitivity of Human Cancer Cells to X-rays and Carbon Ion Radiation. Molecular Cancer Therapeutics. 16: 16-24. PMID 28062703 DOI: 10.1158/1535-7163.Mct-16-0573 |
0.422 |
|
| 2017 |
Kim HS, Nickoloff JA, Wu Y, Williamson EA, Sidhu GS, Reinert BL, Jaiswal AS, Srinivasan G, Patel B, Kong K, Burma S, Lee SH, Hromas RA. Endonuclease EEPD1 is a Gatekeeper for Repair of Stressed Replication Forks. The Journal of Biological Chemistry. PMID 28049724 DOI: 10.1074/Jbc.M116.758235 |
0.583 |
|
| 2016 |
Hromas R, Williamson E, Lee SH, Nickoloff J. PREVENTING THE CHROMOSOMAL TRANSLOCATIONS THAT CAUSE CANCER. Transactions of the American Clinical and Climatological Association. 127: 176-195. PMID 28066052 |
0.55 |
|
| 2016 |
Kim HS, Williamson EA, Nickoloff JA, Hromas RA, Lee SH. Metnase Mediates Loading of Exonuclease 1 onto Single-strand Overhang DNA for End Resection at Stalled Replication Forks. The Journal of Biological Chemistry. PMID 27974460 DOI: 10.1074/Jbc.M116.745646 |
0.517 |
|
| 2016 |
Lee Y, Li HK, Masaoka A, Sunada S, Hirakawa H, Fujimori A, Nickoloff JA, Okayasu R. The purine scaffold Hsp90 inhibitor PU-H71 sensitizes cancer cells to heavy ion radiation by inhibiting DNA repair by homologous recombination and non-homologous end joining. Radiotherapy and Oncology : Journal of the European Society For Therapeutic Radiology and Oncology. PMID 27666928 DOI: 10.1016/J.Radonc.2016.08.029 |
0.393 |
|
| 2016 |
Chun C, Wu Y, Lee SH, Williamson EA, Reinert BL, Jaiswal AS, Nickoloff JA, Hromas RA. The homologous recombination component EEPD1 is required for genome stability in response to developmental stress of vertebrate embryogenesis. Cell Cycle (Georgetown, Tex.). 0. PMID 26900729 DOI: 10.1080/15384101.2016.1151585 |
0.331 |
|
| 2016 |
Hooks G, Anchondo Y, Sharma N, Nickoloff J, Ashley A. Abstract LB-164: DNA ligase IV modulates the cellular response to DNA replication stress Cancer Research. 76. DOI: 10.1158/1538-7445.Am2016-Lb-164 |
0.604 |
|
| 2015 |
Allen CP, Tinganelli W, Sharma N, Nie J, Sicard C, Natale F, King M, Keysar SB, Jimeno A, Furusawa Y, Okayasu R, Fujimori A, Durante M, Nickoloff JA. DNA Damage Response Proteins and Oxygen Modulate Prostaglandin E2 Growth Factor Release in Response to Low and High LET Ionizing Radiation. Frontiers in Oncology. 5: 260. PMID 26697402 DOI: 10.3389/Fonc.2015.00260 |
0.469 |
|
| 2015 |
Wu Y, Lee SH, Williamson EA, Reinert BL, Cho JH, Xia F, Jaiswal AS, Srinivasan G, Patel B, Brantley A, Zhou D, Shao L, Pathak R, Hauer-Jensen M, Singh S, ... ... Nickoloff JA, et al. EEPD1 Rescues Stressed Replication Forks and Maintains Genome Stability by Promoting End Resection and Homologous Recombination Repair. Plos Genetics. 11: e1005675. PMID 26684013 DOI: 10.1371/Journal.Pgen.1005675 |
0.529 |
|
| 2014 |
Williamson EA, Wu Y, Singh S, Byrne M, Wray J, Lee SH, Nickoloff JA, Hromas R. The DNA repair component Metnase regulates Chk1 stability. Cell Division. 9: 1. PMID 25024738 DOI: 10.1186/1747-1028-9-1 |
0.812 |
|
| 2014 |
Ashley AK, Shrivastav M, Nie J, Amerin C, Troksa K, Glanzer JG, Liu S, Opiyo SO, Dimitrova DD, Le P, Sishc B, Bailey SM, Oakley GG, Nickoloff JA. DNA-PK phosphorylation of RPA32 Ser4/Ser8 regulates replication stress checkpoint activation, fork restart, homologous recombination and mitotic catastrophe. Dna Repair. 21: 131-9. PMID 24819595 DOI: 10.1016/J.Dnarep.2014.04.008 |
0.591 |
|
| 2014 |
Kim HS, Chen Q, Kim SK, Nickoloff JA, Hromas R, Georgiadis MM, Lee SH. The DDN catalytic motif is required for Metnase functions in non-homologous end joining (NHEJ) repair and replication restart. The Journal of Biological Chemistry. 289: 10930-8. PMID 24573677 DOI: 10.1074/Jbc.M113.533216 |
0.478 |
|
| 2014 |
Byrne M, Wray J, Reinert B, Wu Y, Nickoloff J, Lee SH, Hromas R, Williamson E. Mechanisms of oncogenic chromosomal translocations. Annals of the New York Academy of Sciences. 1310: 89-97. PMID 24528169 DOI: 10.1111/Nyas.12370 |
0.816 |
|
| 2014 |
Hromas R, Williamson EA, Fnu S, Lee Y, Park S, Beck BD, You J, Leitao A, Nickoloff JA, Lee S. Erratum: Chk1 phosphorylation of Metnase enhances DNA repair but inhibits replication fork restart Oncogene. 33: 536-536. DOI: 10.1038/onc.2013.510 |
0.487 |
|
| 2014 |
Wray J, Liu J, Shaheen M, Hromas R, Nickoloff J, Shen Z. Post-Translational Methylation of Human RAD52 in Response to DNA Damage and Replication Stress International Journal of Radiation Oncology*Biology*Physics. 90: S147-S148. DOI: 10.1016/J.Ijrobp.2014.05.619 |
0.7 |
|
| 2013 |
Nickoloff JA. Assaying DNA double-strand break induction and repair as fast as a speeding comet. Cell Cycle (Georgetown, Tex.). 12: 1335-6. PMID 23588073 DOI: 10.4161/Cc.24667 |
0.606 |
|
| 2013 |
Wray J, Williamson EA, Singh SB, Wu Y, Cogle CR, Weinstock DM, Zhang Y, Lee SH, Zhou D, Shao L, Hauer-Jensen M, Pathak R, Klimek V, Nickoloff JA, Hromas R. PARP1 is required for chromosomal translocations. Blood. 121: 4359-65. PMID 23568489 DOI: 10.1182/Blood-2012-10-460527 |
0.793 |
|
| 2013 |
Allen CP, Fujimori A, Okayasu R, Nickoloff JA. Radiation-induced delayed genome instability and hypermutation in mammalian cells Stress-Induced Mutagenesis. 183-198. DOI: 10.1007/978-1-4614-6280-4_9 |
0.367 |
|
| 2012 |
Musselman CA, Avvakumov N, Watanabe R, Abraham CG, Lalonde ME, Hong Z, Allen C, Roy S, Nuñez JK, Nickoloff J, Kulesza CA, Yasui A, Côté J, Kutateladze TG. Molecular basis for H3K36me3 recognition by the Tudor domain of PHF1. Nature Structural & Molecular Biology. 19: 1266-72. PMID 23142980 DOI: 10.1038/Nsmb.2435 |
0.469 |
|
| 2012 |
Williamson EA, Damiani L, Leitao A, Hu C, Hathaway H, Oprea T, Sklar L, Shaheen M, Bauman J, Wang W, Nickoloff JA, Lee SH, Hromas R. Targeting the transposase domain of the DNA repair component metnase to enhance chemotherapy Cancer Research. 72: 6200-6208. PMID 23090115 DOI: 10.1158/0008-5472.Can-12-0313 |
0.565 |
|
| 2012 |
Liu S, Opiyo SO, Manthey K, Glanzer JG, Ashley AK, Amerin C, Troksa K, Shrivastav M, Nickoloff JA, Oakley GG. Distinct roles for DNA-PK, ATM and ATR in RPA phosphorylation and checkpoint activation in response to replication stress. Nucleic Acids Research. 40: 10780-94. PMID 22977173 DOI: 10.1093/Nar/Gks849 |
0.592 |
|
| 2012 |
Hromas R, Williamson EA, Fnu S, Lee YJ, Park SJ, Beck BD, You JS, Leitao A, Laitao A, Nickoloff JA, Lee SH. Chk1 phosphorylation of Metnase enhances DNA repair but inhibits replication fork restart. Oncogene. 31: 4245-54. PMID 22231448 DOI: 10.1038/Onc.2011.586 |
0.6 |
|
| 2011 |
Ponder J, Yoo BH, Abraham AD, Li Q, Ashley AK, Amerin CL, Zhou Q, Reid BG, Reigan P, Hromas R, Nickoloff JA, LaBarbera DV. Neoamphimedine circumvents metnase-enhanced DNA topoisomerase IIα activity through ATP-competitive inhibition. Marine Drugs. 9: 2397-408. PMID 22163192 DOI: 10.3390/Md9112397 |
0.519 |
|
| 2011 |
Shaheen M, Allen C, Nickoloff JA, Hromas R. Synthetic lethality: exploiting the addiction of cancer to DNA repair. Blood. 117: 6074-82. PMID 21441464 DOI: 10.1182/Blood-2011-01-313734 |
0.575 |
|
| 2011 |
Allen C, Borak TB, Tsujii H, Nickoloff JA. Heavy charged particle radiobiology: using enhanced biological effectiveness and improved beam focusing to advance cancer therapy. Mutation Research. 711: 150-7. PMID 21376738 DOI: 10.1016/J.Mrfmmm.2011.02.012 |
0.331 |
|
| 2011 |
Allen C, Ashley AK, Hromas R, Nickoloff JA. More forks on the road to replication stress recovery. Journal of Molecular Cell Biology. 3: 4-12. PMID 21278446 DOI: 10.1093/Jmcb/Mjq049 |
0.569 |
|
| 2011 |
Fnu S, Williamson EA, De Haro LP, Brenneman M, Wray J, Shaheen M, Radhakrishnan K, Lee SH, Nickoloff JA, Hromas R. Methylation of histone H3 lysine 36 enhances DNA repair by nonhomologous end-joining. Proceedings of the National Academy of Sciences of the United States of America. 108: 540-5. PMID 21187428 DOI: 10.1073/Pnas.1013571108 |
0.802 |
|
| 2010 |
Wray J, Williamson EA, Chester S, Farrington J, Sterk R, Weinstock DM, Jasin M, Lee SH, Nickoloff JA, Hromas R. The transposase domain protein Metnase/SETMAR suppresses chromosomal translocations. Cancer Genetics and Cytogenetics. 200: 184-90. PMID 20620605 DOI: 10.1016/J.Cancergencyto.2010.04.011 |
0.81 |
|
| 2010 |
De Haro LP, Wray J, Williamson EA, Durant ST, Corwin L, Gentry AC, Osheroff N, Lee SH, Hromas R, Nickoloff JA. Metnase promotes restart and repair of stalled and collapsed replication forks. Nucleic Acids Research. 38: 5681-91. PMID 20457750 DOI: 10.1093/Nar/Gkq339 |
0.802 |
|
| 2010 |
Shaheen M, Williamson E, Nickoloff J, Lee SH, Hromas R. Metnase/SETMAR: a domesticated primate transposase that enhances DNA repair, replication, and decatenation. Genetica. 138: 559-66. PMID 20309721 DOI: 10.1007/S10709-010-9452-1 |
0.634 |
|
| 2009 |
Shrivastav M, Miller CA, De Haro LP, Durant ST, Chen BP, Chen DJ, Nickoloff JA. DNA-PKcs and ATM co-regulate DNA double-strand break repair. Dna Repair. 8: 920-9. PMID 19535303 DOI: 10.1016/J.Dnarep.2009.05.006 |
0.59 |
|
| 2009 |
Wray J, Williamson EA, Sheema S, Lee SH, Libby E, Willman CL, Nickoloff JA, Hromas R. Metnase mediates chromosome decatenation in acute leukemia cells. Blood. 114: 1852-8. PMID 19458360 DOI: 10.1182/Blood-2008-08-175760 |
0.801 |
|
| 2009 |
Wray J, Williamson EA, Royce M, Shaheen M, Beck BD, Lee SH, Nickoloff JA, Hromas R. Metnase mediates resistance to topoisomerase II inhibitors in breast cancer cells. Plos One. 4: e5323. PMID 19390626 DOI: 10.1371/Journal.Pone.0005323 |
0.747 |
|
| 2009 |
Tsukuda T, Lo YC, Krishna S, Sterk R, Osley MA, Nickoloff JA. INO80-dependent chromatin remodeling regulates early and late stages of mitotic homologous recombination. Dna Repair. 8: 360-9. PMID 19095087 DOI: 10.1016/J.Dnarep.2008.11.014 |
0.783 |
|
| 2008 |
Williamson EA, Rasila KK, Corwin LK, Wray J, Beck BD, Severns V, Mobarak C, Lee SH, Nickoloff JA, Hromas R. The SET and transposase domain protein Metnase enhances chromosome decatenation: regulation by automethylation. Nucleic Acids Research. 36: 5822-31. PMID 18790802 DOI: 10.1093/Nar/Gkn560 |
0.795 |
|
| 2008 |
Hromas R, Wray J, Lee SH, Martinez L, Farrington J, Corwin LK, Ramsey H, Nickoloff JA, Williamson EA. The human set and transposase domain protein Metnase interacts with DNA Ligase IV and enhances the efficiency and accuracy of non-homologous end-joining. Dna Repair. 7: 1927-37. PMID 18773976 DOI: 10.1016/J.Dnarep.2008.08.002 |
0.821 |
|
| 2008 |
Williamson EA, Farrington J, Martinez L, Ness S, O'Rourke J, Lee SH, Nickoloff J, Hromas R. Expression levels of the human DNA repair protein metnase influence lentiviral genomic integration. Biochimie. 90: 1422-6. PMID 18549821 DOI: 10.1016/J.Biochi.2008.05.010 |
0.485 |
|
| 2008 |
Nickoloff JA, De Haro LP, Wray J, Hromas R. Mechanisms of leukemia translocations. Current Opinion in Hematology. 15: 338-45. PMID 18536572 DOI: 10.1097/Moh.0B013E328302F711 |
0.79 |
|
| 2008 |
Wray J, Liu J, Nickoloff JA, Shen Z. Distinct RAD51 associations with RAD52 and BCCIP in response to DNA damage and replication stress. Cancer Research. 68: 2699-707. PMID 18413737 DOI: 10.1158/0008-5472.Can-07-6505 |
0.802 |
|
| 2008 |
Shrivastav M, De Haro LP, Nickoloff JA. Regulation of DNA double-strand break repair pathway choice Cell Research. 18: 134-147. PMID 18157161 DOI: 10.1038/Cr.2007.111 |
0.625 |
|
| 2008 |
Pohl TJ, Nickoloff JA. Rad51-independent interchromosomal double-strand break repair by gene conversion requires Rad52 but not Rad55, Rad57, or Dmc1. Molecular and Cellular Biology. 28: 897-906. PMID 18039855 DOI: 10.1128/Mcb.00524-07 |
0.651 |
|
| 2007 |
Wu S, Shi Y, Mulligan P, Gay F, Landry J, Liu H, Lu J, Qi HH, Wang W, Nickoloff JA, Wu C, Shi Y. A YY1-INO80 complex regulates genomic stability through homologous recombination-based repair. Nature Structural & Molecular Biology. 14: 1165-72. PMID 18026119 DOI: 10.1038/Nsmb1332 |
0.596 |
|
| 2007 |
Lu H, Yue J, Meng X, Nickoloff JA, Shen Z. BCCIP regulates homologous recombination by distinct domains and suppresses spontaneous DNA damage. Nucleic Acids Research. 35: 7160-70. PMID 17947333 DOI: 10.1093/Nar/Gkm732 |
0.62 |
|
| 2007 |
Krishna S, Wagener BM, Liu HP, Lo YC, Sterk R, Petrini JH, Nickoloff JA. Mre11 and Ku regulation of double-strand break repair by gene conversion and break-induced replication. Dna Repair. 6: 797-808. PMID 17321803 DOI: 10.1016/J.Dnarep.2007.01.006 |
0.766 |
|
| 2007 |
Osley MA, Tsukuda T, Nickoloff JA. ATP-dependent chromatin remodeling factors and DNA damage repair. Mutation Research. 618: 65-80. PMID 17291544 DOI: 10.1016/J.Mrfmmm.2006.07.011 |
0.582 |
|
| 2007 |
Huang L, Kim PM, Nickoloff JA, Morgan WF. Targeted and nontargeted effects of low-dose ionizing radiation on delayed genomic instability in human cells. Cancer Research. 67: 1099-104. PMID 17283143 DOI: 10.1158/0008-5472.Can-06-3697 |
0.336 |
|
| 2006 |
Durant ST, Paffett KS, Shrivastav M, Timmins GS, Morgan WF, Nickoloff JA. UV radiation induces delayed hyperrecombination associated with hypermutation in human cells. Molecular and Cellular Biology. 26: 6047-55. PMID 16880516 DOI: 10.1128/Mcb.00444-06 |
0.376 |
|
| 2006 |
Lo YC, Paffett KS, Amit O, Clikeman JA, Sterk R, Brenneman MA, Nickoloff JA. Sgs1 regulates gene conversion tract lengths and crossovers independently of its helicase activity Molecular and Cellular Biology. 26: 4086-4094. PMID 16705162 DOI: 10.1128/Mcb.00136-06 |
0.669 |
|
| 2006 |
Schildkraut E, Miller CA, Nickoloff JA. Transcription of a donor enhances its use during double-strand break-induced gene conversion in human cells. Molecular and Cellular Biology. 26: 3098-105. PMID 16581784 DOI: 10.1128/Mcb.26.8.3098-3105.2006 |
0.789 |
|
| 2005 |
Lee SH, Oshige M, Durant ST, Rasila KK, Williamson EA, Ramsey H, Kwan L, Nickoloff JA, Hromas R. The SET domain protein Metnase mediates foreign DNA integration and links integration to nonhomologous end-joining repair. Proceedings of the National Academy of Sciences of the United States of America. 102: 18075-80. PMID 16332963 DOI: 10.1073/Pnas.0503676102 |
0.583 |
|
| 2005 |
Tsukuda T, Fleming AB, Nickoloff JA, Osley MA. Chromatin remodelling at a DNA double-strand break site in Saccharomyces cerevisiae. Nature. 438: 379-83. PMID 16292314 DOI: 10.1038/Nature04148 |
0.578 |
|
| 2005 |
Durant ST, Nickoloff JA. Good timing in the cell cycle for precise DNA repair by BRCA1. Cell Cycle (Georgetown, Tex.). 4: 1216-22. PMID 16103751 DOI: 10.4161/Cc.4.9.2027 |
0.618 |
|
| 2005 |
Lo YC, Kurtz RB, Nickoloff JA. Analysis of chromosome/allele loss in genetically unstable yeast by quantitative real-time PCR. Biotechniques. 38: 685-6, 688, 690. PMID 15948291 DOI: 10.2144/05385Bm01 |
0.331 |
|
| 2005 |
Paffett KS, Clikeman JA, Palmer S, Nickoloff JA. Overexpression of Rad51 inhibits double-strand break-induced homologous recombination but does not affect gene conversion tract lengths. Dna Repair. 4: 687-98. PMID 15878310 DOI: 10.1016/J.Dnarep.2005.03.003 |
0.605 |
|
| 2005 |
Schildkraut E, Miller CA, Nickoloff JA. Gene conversion and deletion frequencies during double-strand break repair in human cells are controlled by the distance between direct repeats. Nucleic Acids Research. 33: 1574-80. PMID 15767282 DOI: 10.1093/Nar/Gki295 |
0.796 |
|
| 2005 |
Lu H, Guo X, Meng X, Liu J, Allen C, Wray J, Nickoloff JA, Shen Z. The BRCA2-interacting protein BCCIP functions in RAD51 and BRCA2 focus formation and homologous recombinational repair. Molecular and Cellular Biology. 25: 1949-57. PMID 15713648 DOI: 10.1128/Mcb.25.5.1949-1957.2005 |
0.815 |
|
| 2005 |
Convery E, Shin EK, Ding Q, Wang W, Douglas P, Davis LS, Nickoloff JA, Lees-Miller SP, Meek K. Inhibition of homologous recombination by variants of the catalytic subunit of the DNA-dependent protein kinase (DNA-PKcs). Proceedings of the National Academy of Sciences of the United States of America. 102: 1345-50. PMID 15668400 DOI: 10.1073/Pnas.0406466102 |
0.61 |
|
| 2004 |
Bailey SM, Brenneman MA, Halbrook J, Nickoloff JA, Ullrich RL, Goodwin EH. The kinase activity of DNA-PK is required to protect mammalian telomeres. Dna Repair. 3: 225-33. PMID 15177038 DOI: 10.1016/J.Dnarep.2003.10.013 |
0.602 |
|
| 2004 |
Huang L, Grim S, Smith LE, Kim PM, Nickoloff JA, Goloubeva OG, Morgan WF. Ionizing radiation induces delayed hyperrecombination in Mammalian cells. Molecular and Cellular Biology. 24: 5060-8. PMID 15143196 DOI: 10.1128/Mcb.24.11.5060-5068.2004 |
0.374 |
|
| 2004 |
Miller CA, Bill CA, Nickoloff JA. Characterization of palindromic loop mismatch repair tracts in mammalian cells. Dna Repair. 3: 421-8. PMID 15010318 DOI: 10.1016/J.Dnarep.2003.12.006 |
0.51 |
|
| 2004 |
Nickoloff JA, Brenneman MA. Analysis of recombinational repair of DNA double-strand breaks in mammalian cells with I-SceI nuclease. Methods in Molecular Biology (Clifton, N.J.). 262: 35-52. PMID 14769955 DOI: 10.1385/1-59259-761-0:035 |
0.633 |
|
| 2004 |
Wang H, Boecker W, Wang H, Wang X, Guan J, Thompson LH, Nickoloff JA, Iliakis G. Caffeine inhibits homology-directed repair of I-SceI-induced DNA double-strand breaks. Oncogene. 23: 824-34. PMID 14737117 DOI: 10.1038/Sj.Onc.1207168 |
0.555 |
|
| 2003 |
Allen C, Halbrook J, Nickoloff JA. Interactive competition between homologous recombination and non-homologous end joining. Molecular Cancer Research : McR. 1: 913-20. PMID 14573792 |
0.512 |
|
| 2003 |
Allen C, Miller CA, Nickoloff JA. The mutagenic potential of a single DNA double-strand break in a mammalian chromosome is not influenced by transcription. Dna Repair. 2: 1147-56. PMID 13679152 DOI: 10.1016/S1568-7864(03)00139-3 |
0.635 |
|
| 2003 |
Winn LM, Kim PM, Nickoloff JA. Oxidative stress-induced homologous recombination as a novel mechanism for phenytoin-initiated toxicity. The Journal of Pharmacology and Experimental Therapeutics. 306: 523-7. PMID 12730361 DOI: 10.1124/Jpet.103.052639 |
0.563 |
|
| 2003 |
Palmer S, Schildkraut E, Lazarin R, Nguyen J, Nickoloff JA. Gene conversion tracts in Saccharomyces cerevisiae can be extremely short and highly directional. Nucleic Acids Research. 31: 1164-73. PMID 12582235 DOI: 10.1093/Nar/Gkg219 |
0.793 |
|
| 2002 |
Brenneman MA, Wagener BM, Miller CA, Allen C, Nickoloff JA. XRCC3 controls the fidelity of homologous recombination: roles for XRCC3 in late stages of recombination. Molecular Cell. 10: 387-95. PMID 12191483 DOI: 10.1016/S1097-2765(02)00595-6 |
0.572 |
|
| 2002 |
Kim PM, Paffett KS, Solinger JA, Heyer WD, Nickoloff JA. Spontaneous and double-strand break-induced recombination, and gene conversion tract lengths, are differentially affected by overexpression of wild-type or ATPase-defective yeast Rad54. Nucleic Acids Research. 30: 2727-35. PMID 12087154 DOI: 10.1093/Nar/Gkf413 |
0.616 |
|
| 2002 |
Allen C, Kurimasa A, Brenneman MA, Chen DJ, Nickoloff JA. DNA-dependent protein kinase suppresses double-strand break-induced and spontaneous homologous recombination. Proceedings of the National Academy of Sciences of the United States of America. 99: 3758-63. PMID 11904432 DOI: 10.1073/Pnas.052545899 |
0.612 |
|
| 2001 |
Kim PM, Allen C, Wagener BM, Shen Z, Nickoloff JA. Overexpression of human RAD51 and RAD52 reduces double-strand break-induced homologous recombination in mammalian cells. Nucleic Acids Research. 29: 4352-60. PMID 11691922 DOI: 10.1093/Nar/29.21.4352 |
0.592 |
|
| 2001 |
Bill CA, Nickoloff JA. Spontaneous and ultraviolet light-induced direct repeat recombination in mammalian cells frequently results in repeat deletion. Mutation Research. 487: 41-50. PMID 11595407 DOI: 10.1016/S0921-8777(01)00101-X |
0.499 |
|
| 2001 |
Weng Y, Barton SL, Cho JW, Nickoloff JA. Marker structure and recombination substrate environment influence conversion preference of broken and unbroken alleles in Saccharomyces cerevisiae. Molecular Genetics and Genomics : Mgg. 265: 461-8. PMID 11405629 DOI: 10.1007/s004380000434 |
0.407 |
|
| 2001 |
Bill CA, Taghian DG, Duran WA, Nickoloff JA. Repair bias of large loop mismatches during recombination in mammalian cells depends on loop length and structure. Mutation Research. 485: 255-65. PMID 11267836 DOI: 10.1016/S0921-8777(01)00065-9 |
0.467 |
|
| 2001 |
Weng YS, Xing D, Clikeman JA, Nickoloff JA. Transcriptional effects on double-strand break-induced gene conversion tracts. Mutation Research. 461: 119-32. PMID 11018585 DOI: 10.1016/S0921-8777(00)00043-4 |
0.309 |
|
| 2000 |
Brenneman MA, Weiss AE, Nickoloff JA, Chen DJ. XRCC3 is required for efficient repair of chromosome breaks by homologous recombination. Mutation Research. 459: 89-97. PMID 10725659 DOI: 10.1016/S0921-8777(00)00002-1 |
0.636 |
|
| 2000 |
Li W, Hesabi B, Babbo A, Pacione C, Liu J, Chen DJ, Nickoloff JA, Shen Z. Regulation of double-strand break-induced mammalian homologous recombination by UBL1, a RAD51-interacting protein. Nucleic Acids Research. 28: 1145-53. PMID 10666456 DOI: 10.1093/Nar/28.5.1145 |
0.579 |
|
| 1999 |
Wheeler SL, Khalsa GJ, Nickoloff JA. PCR alone is insufficient for identifying structural modifications to yeast chromosomes Biotechniques. 26: 238-240. PMID 10023532 DOI: 10.2144/99262Bm12 |
0.386 |
|
| 1999 |
Cho JW, Khalsa GJ, Nickoloff JA. Gene-conversion tract directionality is influenced by the chromosome environment. Current Genetics. 34: 269-79. PMID 9799360 DOI: 10.1007/s002940050396 |
0.391 |
|
| 1999 |
Painter RB, Nickoloff JA, Hoekstra MF. DNA Damage and Repair, Volume II: DNA Repair in Higher Eukaryotes Radiation Research. 151: 507. DOI: 10.2307/3579844 |
0.563 |
|
| 1998 |
Nickoloff JA, Spirio LN, Reynolds RJ. A comparison of calcium phosphate coprecipitation and electroporation: Implications for studies on the genetic effects of DNA damage Applied Biochemistry and Biotechnology - Part B Molecular Biotechnology. 10: 93-101. PMID 9819809 DOI: 10.1007/Bf02760857 |
0.564 |
|
| 1998 |
Elliott B, Richardson C, Winderbaum J, Nickoloff JA, Jasin M. Gene conversion tracts from double-strand break repair in mammalian cells. Molecular and Cellular Biology. 18: 93-101. PMID 9418857 DOI: 10.1128/Mcb.18.1.93 |
0.605 |
|
| 1998 |
Painter RB, Nickoloff JA, Hoekstra MF. DNA Damage and Repair, Volume I: DNA Repair in Prokaryotes and Lower Eukaryotes Radiation Research. 149: 654. DOI: 10.2307/3579915 |
0.576 |
|
| 1997 |
Bill CA, Yu Y, Miselis NR, Little JB, Nickoloff JA. A role for p53 in DNA end rejoining by human cell extracts. Mutation Research. 385: 21-9. PMID 9372845 DOI: 10.1016/S0921-8777(97)00040-2 |
0.38 |
|
| 1997 |
Taghian DG, Nickoloff JA. Chromosomal double-strand breaks induce gene conversion at high frequency in mammalian cells. Molecular and Cellular Biology. 17: 6386-93. PMID 9343400 DOI: 10.1128/MCB.17.11.6386 |
0.495 |
|
| 1996 |
Nelson HH, Sweetser DB, Nickoloff JA. Effects of terminal nonhomology and homeology on double-strand-break-induced gene conversion tract directionality. Molecular and Cellular Biology. 16: 2951-7. PMID 8649406 DOI: 10.1128/MCB.16.6.2951 |
0.417 |
|
| 1996 |
Weng YS, Whelden J, Gunn L, Nickoloff JA. Double-strand break-induced mitotic gene conversion: examination of tract polarity and products of multiple recombinational repair events. Current Genetics. 29: 335-43. PMID 8598054 DOI: 10.1007/BF02208614 |
0.389 |
|
| 1994 |
Deng WP, Nickoloff JA. Mismatch repair of heteroduplex DNA intermediates of extrachromosomal recombination in mammalian cells. Molecular and Cellular Biology. 14: 400-6. PMID 8264607 DOI: 10.1128/MCB.14.1.400 |
0.504 |
|
| 1994 |
Deng WP, Nickoloff JA. Preferential repair of UV damage in highly transcribed DNA diminishes UV-induced intrachromosomal recombination in mammalian cells. Molecular and Cellular Biology. 14: 391-9. PMID 8264606 DOI: 10.1128/MCB.14.1.391 |
0.524 |
|
| 1994 |
Sweetser DB, Hough H, Whelden JF, Arbuckle M, Nickoloff JA. Fine-resolution mapping of spontaneous and double-strand break-induced gene conversion tracts in Saccharomyces cerevisiae reveals reversible mitotic conversion polarity. Molecular and Cellular Biology. 14: 3863-75. PMID 8196629 DOI: 10.1128/MCB.14.6.3863 |
0.485 |
|
| 1994 |
Xia F, Amundson SA, Nickoloff JA, Liber HL. Different capacities for recombination in closely related human lymphoblastoid cell lines with different mutational responses to X-irradiation Molecular and Cellular Biology. 14: 5850-5857. PMID 8065318 DOI: 10.1128/Mcb.14.9.5850 |
0.351 |
|
| 1992 |
Deng WP, Nickoloff JA. Site-directed mutagenesis of virtually any plasmid by eliminating a unique site. Analytical Biochemistry. 200: 81-8. PMID 1595905 DOI: 10.1016/0003-2697(92)90280-K |
0.343 |
|
| 1992 |
Nickoloff JA, Reynolds RJ. Electroporation-mediated gene transfer efficiency is reduced by linear plasmid carrier DNAs Analytical Biochemistry. 205: 237-243. PMID 1443569 DOI: 10.1016/0003-2697(92)90429-B |
0.5 |
|
| 1990 |
Nickoloff JA, Reynolds RJ. Transcription stimulates homologous recombination in mammalian cells Molecular and Cellular Biology. 10: 4837-4845. PMID 2167441 DOI: 10.1128/MCB.10.9.4837 |
0.359 |
|
| 1989 |
Nickoloff JA, Singer JD, Hoekstra MF, Heffron F. Double-strand breaks stimulate alternative mechanisms of recombination repair Journal of Molecular Biology. 207: 527-541. PMID 2668534 DOI: 10.1016/0022-2836(89)90462-2 |
0.519 |
|
| 1982 |
Nickoloff JA, Hallick RB. Synthetic deoxyoligonucleotides as general probes for chloroplast transfer RNA genes. Nucleic Acids Research. 10: 8191-210. PMID 6298712 DOI: 10.1093/Nar/10.24.8191 |
0.385 |
|
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