Noelle E. Cockett - Publications

Affiliations: 
Utah State University, Logan, UT, United States 
Area:
Molecular Biology, Genetics

67 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Yu H, Waddell JN, Kuang S, Tellam RL, Cockett NE, Bidwell CA. Identification of genes directly responding to DLK1 signaling in Callipyge sheep. Bmc Genomics. 19: 283. PMID 29690867 DOI: 10.1186/S12864-018-4682-1  0.382
2018 Naval-Sanchez M, Nguyen Q, McWilliam S, Porto-Neto LR, Tellam R, Vuocolo T, Reverter A, Perez-Enciso M, Brauning R, Clarke S, McCulloch A, Zamani W, Naderi S, Rezaei HR, Pompanon F, ... ... Cockett N, et al. Sheep genome functional annotation reveals proximal regulatory elements contributed to the evolution of modern breeds. Nature Communications. 9: 859. PMID 29491421 DOI: 10.1038/S41467-017-02809-1  0.384
2016 Jenkins GM, Goddard ME, Black MA, Brauning R, Auvray B, Dodds KG, Kijas JW, Cockett N, McEwan JC. Copy number variants in the sheep genome detected using multiple approaches. Bmc Genomics. 17: 441. PMID 27277319 DOI: 10.1186/S12864-016-2754-7  0.327
2016 Kijas JW, Hadfield T, Naval Sanchez M, Cockett N. Genome-wide association reveals the locus responsible for four-horned ruminant. Animal Genetics. 47: 258-62. PMID 26767438 DOI: 10.1111/Age.12409  0.416
2015 Xu X, Ectors F, Davis EE, Pirottin D, Cheng H, Farnir F, Hadfield T, Cockett N, Charlier C, Georges M, Takeda H. Ectopic Expression of Retrotransposon-Derived PEG11/RTL1 Contributes to the Callipyge Muscular Hypertrophy. Plos One. 10: e0140594. PMID 26474044 DOI: 10.1371/Journal.Pone.0140594  0.38
2014 Cheng H, Xu X, Hadfield T, Cockett N, Charlier C, Georges M, Takeda H. Experimental evaluation does not reveal a direct effect of microRNA from the callipyge locus on DLK1 expression. Bmc Genomics. 15: 944. PMID 25359221 DOI: 10.1186/1471-2164-15-944  0.35
2014 Bidwell CA, Waddell JN, Taxis TM, Yu H, Tellam RL, Neary MK, Cockett NE. New insights into polar overdominance in callipyge sheep. Animal Genetics. 45: 51-61. PMID 24990181 DOI: 10.1111/Age.12132  0.424
2014 Li J, Greenwood PL, Cockett NE, Hadfield TS, Vuocolo T, Byrne K, White JD, Tellam RL, Schirra HJ. Impacts of the callipyge mutation on ovine plasma metabolites and muscle fibre type Plos One. 9. PMID 24937646 DOI: 10.1371/Journal.Pone.0099726  0.369
2014 Jiang Y, Xie M, Chen W, Talbot R, Maddox JF, Faraut T, Wu C, Muzny DM, Li Y, Zhang W, Stanton JA, Brauning R, Barris WC, Hourlier T, Aken BL, ... ... Cockett N, et al. The sheep genome illuminates biology of the rumen and lipid metabolism. Science (New York, N.Y.). 344: 1168-73. PMID 24904168 DOI: 10.1126/Science.1252806  0.306
2014 Byrne K, McWilliam S, Vuocolo T, Gondro C, Cockett NE, Tellam RL. Genomic architecture of histone 3 lysine 27 trimethylation during late ovine skeletal muscle development Animal Genetics. 45: 427-438. PMID 24673416 DOI: 10.1111/Age.12145  0.398
2013 Dong Y, Xie M, Jiang Y, Xiao N, Du X, Zhang W, Tosser-Klopp G, Wang J, Yang S, Liang J, Chen W, Chen J, Zeng P, Hou Y, Bian C, ... ... Cockett N, et al. Sequencing and automated whole-genome optical mapping of the genome of a domestic goat (Capra hircus). Nature Biotechnology. 31: 135-41. PMID 23263233 DOI: 10.1038/Nbt.2478  0.345
2012 Tellam RL, Cockett NE, Vuocolo T, Bidwell CA. Genes contributing to genetic variation of muscling in sheep. Frontiers in Genetics. 3: 164. PMID 22952470 DOI: 10.3389/Fgene.2012.00164  0.435
2012 Kijas JW, Miller JE, Hadfield T, McCulloch R, Garcia-Gamez E, Porto Neto LR, Cockett N. Tracking the emergence of a new breed using 49,034 SNP in sheep. Plos One. 7: e41508. PMID 22848516 DOI: 10.1371/Journal.Pone.0041508  0.34
2010 Caiment F, Charlier C, Hadfield T, Cockett N, Georges M, Baurain D. Assessing the effect of the CLPG mutation on the microRNA catalog of skeletal muscle using high-throughput sequencing. Genome Research. 20: 1651-62. PMID 20944086 DOI: 10.1101/Gr.108787.110  0.309
2010 Byrne K, Vuocolo T, Gondro C, White JD, Cockett NE, Hadfield T, Bidwell CA, Waddell JN, Tellam RL. A gene network switch enhances the oxidative capacity of ovine skeletal muscle during late fetal development. Bmc Genomics. 11: 378. PMID 20546621 DOI: 10.1186/1471-2164-11-378  0.362
2010 Byrne K, Colgrave ML, Vuocolo T, Pearson R, Bidwell CA, Cockett NE, Lynn DJ, Fleming-Waddell JN, Tellam RL. The imprinted retrotransposon-like gene PEG11 (RTL1) is expressed as a full-length protein in skeletal muscle from Callipyge sheep. Plos One. 5: e8638. PMID 20072617 DOI: 10.1371/Journal.Pone.0008638  0.459
2009 Goldammer T, Di Meo GP, Lühken G, Drögemüller C, Wu CH, Kijas J, Dalrymple BP, Nicholas FW, Maddox JF, Iannuzzi L, Cockett NE. Molecular cytogenetics and gene mapping in sheep (Ovis aries, 2n = 54). Cytogenetic and Genome Research. 126: 63-76. PMID 20016157 DOI: 10.1159/000245907  0.403
2009 Fleming-Waddell JN, Olbricht GR, Taxis TM, White JD, Vuocolo T, Craig BA, Tellam RL, Neary MK, Cockett NE, Bidwell CA. Effect of DLK1 and RTL1 but not MEG3 or MEG8 on muscle gene expression in Callipyge lambs. Plos One. 4: e7399. PMID 19816583 DOI: 10.1371/Journal.Pone.0007399  0.442
2009 Goldammer T, Brunner RM, Rebl A, Wu CH, Nomura K, Hadfield T, Gill C, Dalrymple BP, Womack JE, Cockett NE. A high-resolution radiation hybrid map of sheep chromosome X and comparison with human and cattle. Cytogenetic and Genome Research. 125: 40-5. PMID 19617695 DOI: 10.1159/000207520  0.358
2009 Goldammer T, Brunner RM, Rebl A, Wu CH, Nomura K, Hadfield T, Maddox JF, Cockett NE. Cytogenetic anchoring of radiation hybrid and virtual maps of sheep chromosome X and comparison of X chromosomes in sheep, cattle, and human. Chromosome Research : An International Journal On the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology. 17: 497-506. PMID 19575301 DOI: 10.1007/S10577-009-9047-9  0.338
2009 Jann OC, King A, Corrales NL, Anderson SI, Jensen K, Ait-Ali T, Tang H, Wu C, Cockett NE, Archibald AL, Glass EJ. Comparative genomics of Toll-like receptor signalling in five species. Bmc Genomics. 10: 216. PMID 19432955 DOI: 10.1186/1471-2164-10-216  0.366
2009 Wu CH, Jin W, Nomura K, Goldammer T, Hadfield T, Dalrymple BP, McWilliam S, Maddox JF, Cockett NE. A radiation hybrid comparative map of ovine chromosome 1 aligned to the virtual sheep genome. Animal Genetics. 40: 435-55. PMID 19397521 DOI: 10.1111/J.1365-2052.2009.01857.X  0.336
2009 Kijas JW, Townley D, Dalrymple BP, Heaton MP, Maddox JF, McGrath A, Wilson P, Ingersoll RG, McCulloch R, McWilliam S, Tang D, McEwan J, Cockett N, Oddy VH, Nicholas FW, et al. A genome wide survey of SNP variation reveals the genetic structure of sheep breeds. Plos One. 4: e4668. PMID 19270757 DOI: 10.1371/Journal.Pone.0004668  0.352
2008 Wu CH, Nomura K, Goldammer T, Hadfield T, Dalrymple BP, McWilliam S, Maddox JF, Womack JE, Cockett NE. A high-resolution comparative radiation hybrid map of ovine chromosomal regions that are homologous to human chromosome 6 (HSA6). Animal Genetics. 39: 459-67. PMID 18565162 DOI: 10.1111/J.1365-2052.2008.01751.X  0.322
2008 Drögemüller M, Tetens J, Dalrymple B, Goldammer T, Wu CH, Cockett NE, Leeb T, Drögemüller C. A comparative radiation hybrid map of sheep chromosome 10. Cytogenetic and Genome Research. 121: 35-40. PMID 18544924 DOI: 10.1159/000124379  0.355
2008 Lavulo LT, Uaesoontrachoon K, Mirams M, White JD, Cockett NE, Mackie EJ, Pagel CN. Myoblasts isolated from hypertrophy-responsive callipyge muscles show altered growth rates and increased resistance to serum deprivation-induced apoptosis. Cells, Tissues, Organs. 187: 141-51. PMID 17957094 DOI: 10.1159/000110080  0.327
2008 White JD, Vuocolo T, McDonagh M, Grounds MD, Harper GS, Cockett NE, Tellam R. Analysis of the callipyge phenotype through skeletal muscle development; association of Dlk1 with muscle precursor cells. Differentiation; Research in Biological Diversity. 76: 283-98. PMID 17697128 DOI: 10.1111/J.1432-0436.2007.00208.X  0.385
2007 Dalrymple BP, Kirkness EF, Nefedov M, McWilliam S, Ratnakumar A, Barris W, Zhao S, Shetty J, Maddox JF, O'Grady M, Nicholas F, Crawford AM, Smith T, de Jong PJ, McEwan J, ... ... Cockett NE, et al. Using comparative genomics to reorder the human genome sequence into a virtual sheep genome. Genome Biology. 8: R152. PMID 17663790 DOI: 10.1186/Gb-2007-8-7-R152  0.325
2007 Wu CH, Nomura K, Goldammer T, Hadfield T, Womack JE, Cockett NE. An ovine whole-genome radiation hybrid panel used to construct an RH map of ovine chromosome 9. Animal Genetics. 38: 534-6. PMID 17617212 DOI: 10.1111/J.1365-2052.2007.01626.X  0.309
2007 Meo GPD, Perucatti A, Floriot S, Hayes H, Schibler L, Rullo R, Incarnato D, Ferretti L, Cockett N, Cribiu E, Williams JL, Eggen A, Iannuzzi L. An advanced sheep (Ovis aries, 2n = 54) cytogenetic map and assignment of 88 new autosomal loci by fluorescence in situ hybridization and R-banding Animal Genetics. 38: 233-240. PMID 17433010 DOI: 10.1111/J.1365-2052.2007.01598.X  0.335
2007 Tetens J, Goldammer T, Maddox JF, Cockett NE, Leeb T, Drögemüller C. A radiation hybrid map of sheep chromosome 23 based on ovine BAC-end sequences. Animal Genetics. 38: 132-40. PMID 17326803 DOI: 10.1111/J.1365-2052.2007.01572.X  0.34
2007 Fleming-Waddell JN, Wilson LM, Olbricht GR, Vuocolo T, Byrne K, Craig BA, Tellam RL, Cockett NE, Bidwell CA. Analysis of gene expression during the onset of muscle hypertrophy in callipyge lambs. Animal Genetics. 38: 28-36. PMID 17257185 DOI: 10.1111/J.1365-2052.2006.01562.X  0.429
2007 Vuocolo T, Byrne K, White J, McWilliam S, Reverter A, Cockett NE, Tellam RL. Identification of a gene network contributing to hypertrophy in callipyge skeletal muscle. Physiological Genomics. 28: 253-72. PMID 17077277 DOI: 10.1152/Physiolgenomics.00121.2006  0.419
2007 Maddox JF, Cockett NE. An update on sheep and goat linkage maps and other genomic resources Small Ruminant Research. 70: 4-20. DOI: 10.1016/J.Smallrumres.2007.01.008  0.357
2006 Perkins AC, Kramer LN, Spurlock DM, Hadfield TS, Cockett NE, Bidwell CA. Postnatal changes in the expression of genes located in the callipyge region in sheep skeletal muscle Animal Genetics. 37: 535-542. PMID 17121598 DOI: 10.1111/J.1365-2052.2006.01518.X  0.425
2006 Takeda H, Caiment F, Smit M, Hiard S, Tordoir X, Cockett N, Georges M, Charlier C. The callipyge mutation enhances bidirectional long-range DLK1-GTL2 intergenic transcription in cis. Proceedings of the National Academy of Sciences of the United States of America. 103: 8119-24. PMID 16690740 DOI: 10.1073/Pnas.0602844103  0.727
2006 Beever JE, Smit MA, Meyers SN, Hadfield TS, Bottema C, Albretsen J, Cockett NE. A single-base change in the tyrosine kinase II domain of ovine FGFR3 causes hereditary chondrodysplasia in sheep. Animal Genetics. 37: 66-71. PMID 16441300 DOI: 10.1111/J.1365-2052.2005.01398.X  0.714
2005 Smit MA, Tordoir X, Gyapay G, Cockett NE, Georges M, Charlier C. BEGAIN: a novel imprinted gene that generates paternally expressed transcripts in a tissue- and promoter-specific manner in sheep. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 16: 801-14. PMID 16261422 DOI: 10.1007/S00335-004-2415-Z  0.723
2005 Cockett NE, Smit MA, Bidwell CA, Segers K, Hadfield TL, Snowder GD, Georges M, Charlier C. The callipyge mutation and other genes that affect muscle hypertrophy in sheep. Genetics, Selection, Evolution : Gse. 37: S65-81. PMID 15601596 DOI: 10.1186/1297-9686-37-S1-S65  0.719
2005 Notter DR, Cockett NE. Opportunities for detection and use of QTL influencing seasonal reproduction in sheep: a review. Genetics, Selection, Evolution : Gse. 37: S39-53. PMID 15601594 DOI: 10.1186/1297-9686-37-S1-S39  0.394
2005 Vuocolo T, Cockett NE, Tellam RL. Expression of imprinted genes surrounding the callipyge mutation in ovine skeletal muscle Animal Production Science. 45: 879-892. DOI: 10.1071/Ea05049  0.437
2004 Georges M, Charlier C, Smit M, Davis E, Shay T, Tordoir X, Takeda H, Caiment F, Cockett N. Toward molecular understanding of polar overdominance at the ovine callipyge locus. Cold Spring Harbor Symposia On Quantitative Biology. 69: 477-83. PMID 16117683 DOI: 10.1101/Sqb.2004.69.477  0.66
2004 Davis E, Jensen CH, Schroder HD, Farnir F, Shay-Hadfield T, Kliem A, Cockett N, Georges M, Charlier C. Ectopic expression of DLK1 protein in skeletal muscle of padumnal heterozygotes causes the callipyge phenotype Current Biology. 14: 1858-1862. PMID 15498495 DOI: 10.1016/J.Cub.2004.09.079  0.429
2004 Bidwell CA, Kramer LN, Perkins AC, Hadfield TS, Moody DE, Cockett NE. Expression of PEG11 and PEG11AS transcripts in normal and callipyge sheep. Bmc Biology. 2: 17. PMID 15298706 DOI: 10.1186/1741-7007-2-17  0.443
2003 Cockett NE. Current status of the ovine genome map Cytogenetic and Genome Research. 102: 76-78. PMID 14970682 DOI: 10.1159/000075728  0.342
2003 Notter DR, Cockett NE, Hadfield TS. Evaluation of melatonin receptor 1a as a candidate gene influencing reproduction in an autumn-lambing sheep flock Journal of Animal Science. 81: 912-917. PMID 12723079 DOI: 10.2527/2003.814912X  0.331
2003 Georges M, Charlier C, Cockett N. The callipyge locus: evidence for the trans interaction of reciprocally imprinted genes. Trends in Genetics : Tig. 19: 248-52. PMID 12711215 DOI: 10.1016/S0168-9525(03)00082-9  0.409
2003 Smit M, Segers K, Carrascosa LG, Shay T, Baraldi F, Gyapay G, Snowder G, Georges M, Cockett N, Charlier C. Mosaicism of Solid Gold supports the causality of a noncoding A-to-G transition in the determinism of the callipyge phenotype. Genetics. 163: 453-6. PMID 12586730  0.69
2002 Smit MA, Shay TL, Beever JE, Notter DR, Cockett NE. Identification of an agouti -like locus in sheep. Animal Genetics. 33: 383-5. PMID 12354151 DOI: 10.1046/J.1365-2052.2002.00896_5.X  0.697
2002 Wang S, Cockett NE, Miller JM, Shay TL, Maciulis A, Sutton DL, Foote WC, Holyoak GR, Evans RC, Bunc TD, Beever JE, Call JW, Taylor WD, Marshall MR. Polymorphic distribution of the ovine prion protein (PrP) gene in scrapie-infected sheep flocks in which embryo transfer was used to circumvent the transmissions of scrapie. Theriogenology. 57: 1865-75. PMID 12041690 DOI: 10.1016/S0093-691X(02)00673-8  0.315
2001 Cockett NE, Shay TL, Smit M. Analysis of the sheep genome Physiol Genomics. 7: 69-78. PMID 11773593 DOI: 10.1152/Physiolgenomics.00051.2001  0.716
2001 Bidwell CA, Shay TL, Georges M, Beever JE, Berghmans S, Cockett NE. Differential expression of the GTL2 gene within the callipyge region of ovine chromosome 18. Animal Genetics. 32: 248-256. PMID 11683710 DOI: 10.1046/J.1365-2052.2001.00776.X  0.433
2001 Charlier C, Segers K, Wagenaar D, Karim L, Berghmans S, Jaillon O, Shay T, Weissenbach J, Cockett N, Gyapay G, Georges M. Human-ovine comparative sequencing of a 250-kb imprinted domain encompassing the callipyge (clpg) locus and identification of six imprinted transcripts: DLK1, DAT, GTL2, PEG11, antiPEG11, and MEG8 Genome Research. 11: 850-862. PMID 11337479 DOI: 10.1101/Gr.172701  0.377
2001 Charlier C, Segers K, Karim L, Shay T, Gyapay G, Cockett N, Georges M. The callipyge mutation enhances the expression of coregulated imprinted genes in cis without affecting their imprinting status Nature Genetics. 27: 367-369. PMID 11279514 DOI: 10.1038/86856  0.435
2001 Berghmans S, Segers K, Shay T, Georges M, Cockett N, Charlier C. Breakpoint mapping positions the callipyge gene within a 450-kilobase chromosome segment containing the DLK1 and GTL2 genes. Mammalian Genome. 12: 183-185. PMID 11210193 DOI: 10.1007/S003350010246  0.324
2001 Shay TL, Berghmans S, Segers K, Meyers S, Beever JE, Womack JE, Georges M, Charlier C, Cockett NE. Fine-mapping and construction of a bovine contig spanning the ovine callipyge locus. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 12: 141-9. PMID 11210184 DOI: 10.1007/S003350010248  0.39
2001 Duckett SK, Snowder GD, Cockett NE. Effect of the callipyge gene on muscle growth, calpastatin activity, and tenderness of three muscles across the growth curve. Journal of Animal Science. 78: 2836-41. PMID 11063306 DOI: 10.2527/2000.78112836X  0.324
2000 Segers K, Vaiman D, Berghmans S, Shay T, Meyers S, Beever J, Cockett N, Georges M, Charlier C. Construction and characterization of an ovine BAC contig spanning the callipyge locus. Animal Genetics. 31: 352-9. PMID 11167521 DOI: 10.1046/J.1365-2052.2000.00676.X  0.347
1999 Cockett NE, Jackson SP, Snowder GD, Shay TL, Berghmans S, Beever JE, Carpenter C, Georges M. The callipyge phenomenon: evidence for unusual genetic inheritance. Journal of Animal Science. 77: 221-227. PMID 15526799 DOI: 10.2527/1999.77Suppl_2221X  0.437
1999 Lien S, Cockett NE, Klungland H, Arnheim N, Georges M, Gomez-Raya L. High-resolution gametic map of the sheep callipyge region: Linkage heterogeneity among rams detected by sperm typing Animal Genetics. 30: 42-46. PMID 10050282 DOI: 10.1046/J.1365-2052.1999.00430.X  0.362
1999 Cockett NE, Shay TL, Beever JE, Nielsen D, Albretsen J, Georges M, Peterson K, Stephens A, Vernon W, Timofeevskaia O, South S, Mork J, Maciulis A, Bunch TD. Localization of the locus causing Spider Lamb Syndrome to the distal end of ovine Chromosome 6. Mammalian Genome. 10: 35-38. PMID 9892730 DOI: 10.1007/S003359900938  0.421
1997 Cockett NE, Berghams S, Beckers MC, Shay TL, Jackson SP, Snowder GD, Georges M. The Callipyge gene of sheep Animal Biotechnology. 8: 23-30. DOI: 10.1080/10495399709525863  0.394
1996 Carpenter CE, Rice OD, Cockett NE, Snowder GD. Histology and composition of muscles from normal and callipyge lambs Journal of Animal Science. 74: 388-393. PMID 8690675 DOI: 10.2527/1996.742388X  0.312
1996 Cockett NE, Jackson SP, Shay TL, Farnir F, Berghmans S, Snowder GD, Nielsen DM, Georges M. Polar overdominance at the ovine callipyge locus Science. 273: 236-238. PMID 8662506 DOI: 10.1126/Science.273.5272.236  0.403
1995 Cockett NE, Shay TL, Green RD, Hancock DL. Rapid communication: a TaqI restriction fragment length polymorphism in the bovine calpastatin gene Journal of Animal Science. 73: 3790. PMID 8655457 DOI: 10.2527/1995.73123790X  0.305
1994 Cockett NE, Jackson SP, Shay TL, Nielsen D, Moore SS, Steele MR, Barendse W, Green RD, Georges M. Chromosomal localization of the callipyge gene in sheep (Ovis aries) using bovine DNA markers. Proceedings of the National Academy of Sciences of the United States of America. 91: 3019-23. PMID 8159698 DOI: 10.1073/Pnas.91.8.3019  0.381
1993 Cronin MA, Cockett N. Kappa-casein polymorphisms among cattle breeds and bison herds. Animal Genetics. 24: 135-8. PMID 8101056 DOI: 10.1111/J.1365-2052.1993.Tb00256.X  0.343
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