Malini Raghavan - Publications

Affiliations: 
University of Michigan, Ann Arbor, Ann Arbor, MI 
Area:
Immunology, Cell Biology

55 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Kaur A, Surnilla A, Zaitouna AJ, Mumphrey MB, Basrur V, Grigorova I, Cieslik M, Carrington M, Nesvizhskii AI, Raghavan M. Mass Spectrometric Profiling of HLA-B44 Peptidomes Provides Evidence for Tapasin-Mediated Tryptophan Editing. Journal of Immunology (Baltimore, Md. : 1950). PMID 37737643 DOI: 10.4049/jimmunol.2300232  0.467
2023 Olson E, Raghavan M. Major histocompatibility complex class I assembly within endolysosomal pathways. Current Opinion in Immunology. 84: 102356. PMID 37379719 DOI: 10.1016/j.coi.2023.102356  0.482
2023 Kaur A, Surnilla A, Zaitouna AJ, Basrur V, Mumphrey MB, Grigorova I, Cieslik M, Carrington M, Nesvizhskii AI, Raghavan M. Mass spectrometric profiling of HLA-B44 peptidomes provides evidence for tapasin-mediated tryptophan editing. Biorxiv : the Preprint Server For Biology. PMID 36909546 DOI: 10.1101/2023.02.26.530125  0.474
2023 Olson E, Ceccarelli T, Raghavan M. Endo-lysosomal assembly variations among human leukocyte antigen class I (HLA class I) allotypes. Elife. 12. PMID 36722462 DOI: 10.7554/eLife.79144  0.448
2021 Venkatesan A, Satin LS, Raghavan M. Roles of Calreticulin in Protein Folding, Immunity, Calcium Signaling and Cell Transformation. Progress in Molecular and Subcellular Biology. 59: 145-162. PMID 34050865 DOI: 10.1007/978-3-030-67696-4_7  0.36
2021 Geng J, Raghavan M. Conformational sensing of major histocompatibility complex (MHC) class I molecules by immune receptors and intracellular assembly factors. Current Opinion in Immunology. 70: 67-74. PMID 33857912 DOI: 10.1016/j.coi.2021.03.014  0.479
2021 Kavadichanda CG, Geng J, Bulusu SN, Negi VS, Raghavan M. Spondyloarthritis and the Human Leukocyte Antigen (HLA)-B27 Connection. Frontiers in Immunology. 12: 601518. PMID 33763060 DOI: 10.3389/fimmu.2021.601518  0.334
2020 Zaitouna AJ, Ramon DS, Raghavan M. Assessments of HLA-I Specificities of Anti-HLA-I Monoclonal Antibodies Using Solid Phase Bead Arrays. Bio-Protocol. 10: e3655. PMID 33659325 DOI: 10.21769/BioProtoc.3655  0.313
2020 Bashirova AA, Viard M, Naranbhai V, Grifoni A, Garcia-Beltran W, Akdag M, Yuki Y, Gao X, O'hUigin C, Raghavan M, Wolinsky S, Bream JH, Duggal P, Martinson J, Michael NL, et al. HLA tapasin independence: broader peptide repertoire and HIV control. Proceedings of the National Academy of Sciences of the United States of America. PMID 33097667 DOI: 10.1073/pnas.2013554117  0.343
2020 Zaitoua AJ, Kaur A, Raghavan M. Variations in MHC class I antigen presentation and immunopeptidome selection pathways. F1000research. 9. PMID 33014341 DOI: 10.12688/f1000research.26935.1  0.495
2020 Painter MM, Zimmerman GE, Merlino MS, Robertson AW, Terry VH, Ren X, McLeod MR, Gomez-Rodriguez L, Garcia KA, Leonard JA, Leopold KE, Neevel AJ, Lubow J, Olson E, Piechocka-Trocha A, ... ... Raghavan M, et al. Concanamycin A counteracts HIV-1 Nef to enhance immune clearance of infected primary cells by cytotoxic T lymphocytes. Proceedings of the National Academy of Sciences of the United States of America. PMID 32900948 DOI: 10.1073/Pnas.2008615117  0.381
2020 Olson E, Geng J, Raghavan M. Polymorphisms of HLA-B: influences on assembly and immunity. Current Opinion in Immunology. 64: 137-145. PMID 32619904 DOI: 10.1016/J.Coi.2020.05.008  0.518
2020 Kaur A, Raghavan M. A Calreticulin Tail: C-terminal Mutants of Calreticulin Allow Cancer Cells to Evade Phagocytosis. Molecular Cell. 77: 683-685. PMID 32084350 DOI: 10.1016/J.Molcel.2020.01.024  0.301
2019 Zhang IX, Raghavan M, Satin LS. The Endoplasmic Reticulum and Calcium Homeostasis in Pancreatic Beta Cells. Endocrinology. PMID 31796960 DOI: 10.1210/Endocr/Bqz028  0.305
2019 Geng J, Raghavan M. CD8αα homodimers function as a coreceptor for KIR3DL1. Proceedings of the National Academy of Sciences of the United States of America. PMID 31420518 DOI: 10.1073/Pnas.1905943116  0.444
2019 Raghavan M, Yarzabek B, Zaitouna AJ, Krishnakumar S, Ramon DS. Strategies for the measurements of expression levels and half-lives of HLA class I allotypes. Human Immunology. PMID 30735755 DOI: 10.1016/j.humimm.2019.02.001  0.413
2018 Geng J, Zaitouna AJ, Raghavan M. Selected HLA-B allotypes are resistant to inhibition or deficiency of the transporter associated with antigen processing (TAP). Plos Pathogens. 14: e1007171. PMID 29995954 DOI: 10.1371/journal.ppat.1007171  0.492
2018 Yarzabek B, Zaitouna AJ, Olson E, Silva GN, Geng J, Geretz A, Thomas R, Krishnakumar S, Ramon DS, Raghavan M. Variations in HLA-B cell surface expression, half-life and extracellular antigen receptivity. Elife. 7. PMID 29989547 DOI: 10.7554/eLife.34961  0.447
2018 Geng J, Altman JD, Krishnakumar S, Raghavan M. Empty conformers of HLA-B preferentially bind CD8 and regulate CD8+ T cell function. Elife. 7. PMID 29741477 DOI: 10.7554/Elife.36341  0.407
2018 Yarzabek B, Zaitouna AJ, Olson E, Silva GN, Geng J, Geretz A, Thomas R, Krishnakumar S, Ramon DS, Raghavan M. Author response: Variations in HLA-B cell surface expression, half-life and extracellular antigen receptivity Elife. DOI: 10.7554/Elife.34961.051  0.37
2017 Raghavan M, Yarzabek B, Silva G, Zaitouna A, Geng J, Krishnakumar S, Ramon D. P022 Variations in surface expression and stability among human leukocyte antigens (HLA-B) Human Immunology. 78: 69. DOI: 10.1016/J.Humimm.2017.06.082  0.48
2016 Wijeyesakere SJ, Bedi SK, Huynh D, Raghavan M. The C-Terminal Acidic Region of Calreticulin Mediates Phosphatidylserine Binding and Apoptotic Cell Phagocytosis. Journal of Immunology (Baltimore, Md. : 1950). PMID 27036911 DOI: 10.4049/Jimmunol.1502122  0.364
2015 Wijeyesakere SJ, Gagnon JK, Arora K, Brooks CL, Raghavan M. Regulation of calreticulin-major histocompatibility complex (MHC) class I interactions by ATP. Proceedings of the National Academy of Sciences of the United States of America. 112: E5608-17. PMID 26420867 DOI: 10.1073/Pnas.1510132112  0.58
2015 Geng J, Pogozheva ID, Mosberg HI, Raghavan M. Use of Functional Polymorphisms To Elucidate the Peptide Binding Site of TAP Complexes. Journal of Immunology (Baltimore, Md. : 1950). 195: 3436-48. PMID 26324772 DOI: 10.4049/Jimmunol.1500985  0.483
2015 Raghavan M, Geng J. HLA-B polymorphisms and intracellular assembly modes. Molecular Immunology. PMID 26239417 DOI: 10.1016/J.Molimm.2015.07.007  0.548
2014 Rizvi SM, Salam N, Geng J, Qi Y, Bream JH, Duggal P, Hussain SK, Martinson J, Wolinsky SM, Carrington M, Raghavan M. Distinct assembly profiles of HLA-B molecules. Journal of Immunology (Baltimore, Md. : 1950). 192: 4967-76. PMID 24790147 DOI: 10.4049/Jimmunol.1301670  0.54
2013 Geng J, Sivaramakrishnan S, Raghavan M. Analyses of conformational states of the transporter associated with antigen processing (TAP) protein in a native cellular membrane environment. The Journal of Biological Chemistry. 288: 37039-47. PMID 24196954 DOI: 10.1074/Jbc.M113.504696  0.51
2013 Wijeyesakere SJ, Rizvi SM, Raghavan M. Glycan-dependent and -independent interactions contribute to cellular substrate recruitment by calreticulin. The Journal of Biological Chemistry. 288: 35104-16. PMID 24100026 DOI: 10.1074/Jbc.M113.507921  0.411
2013 Raghavan M, Wijeyesakere SJ, Peters LR, Del Cid N. Calreticulin in the immune system: ins and outs. Trends in Immunology. 34: 13-21. PMID 22959412 DOI: 10.1016/J.It.2012.08.002  0.771
2012 Del Cid N, Shen L, Belleisle J, Raghavan M. Assessment of roles for calreticulin in the cross-presentation of soluble and bead-associated antigens. Plos One. 7: e41727. PMID 22848581 DOI: 10.1371/Journal.Pone.0041727  0.778
2011 Peters LR, Raghavan M. Endoplasmic reticulum calcium depletion impacts chaperone secretion, innate immunity, and phagocytic uptake of cells. Journal of Immunology (Baltimore, Md. : 1950). 187: 919-31. PMID 21670312 DOI: 10.4049/Jimmunol.1100690  0.325
2011 Rizvi SM, Del Cid N, Lybarger L, Raghavan M. Distinct functions for the glycans of tapasin and heavy chains in the assembly of MHC class I molecules. Journal of Immunology (Baltimore, Md. : 1950). 186: 2309-20. PMID 21263072 DOI: 10.4049/Jimmunol.1002959  0.799
2011 Wijeyesakere SJ, Gafni AA, Raghavan M. Calreticulin is a thermostable protein with distinct structural responses to different divalent cation environments. The Journal of Biological Chemistry. 286: 8771-85. PMID 21177861 DOI: 10.1074/Jbc.M110.169193  0.398
2011 Jeffery E, Peters LR, Raghavan M. The polypeptide binding conformation of calreticulin facilitates its cell-surface expression under conditions of endoplasmic reticulum stress. The Journal of Biological Chemistry. 286: 2402-15. PMID 21075854 DOI: 10.1074/Jbc.M110.180877  0.576
2010 Li XC, Raghavan M. Structure and function of major histocompatibility complex class I antigens. Current Opinion in Organ Transplantation. 15: 499-504. PMID 20613521 DOI: 10.1097/Mot.0B013E32833Bfb33  0.453
2010 Raghavan M. TAP-inhibitors from old world primate 1-herpesviruses and their use: WO2009008713. Expert Opinion On Therapeutic Patents. 20: 277-82. PMID 20100007 DOI: 10.1517/13543770903501563  0.432
2010 Rizvi SM, Raghavan M. Mechanisms of function of tapasin, a critical major histocompatibility complex class I assembly factor. Traffic (Copenhagen, Denmark). 11: 332-47. PMID 20070606 DOI: 10.1111/J.1600-0854.2009.01025.X  0.606
2010 Del Cid N, Jeffery E, Rizvi SM, Stamper E, Peters LR, Brown WC, Provoda C, Raghavan M. Modes of calreticulin recruitment to the major histocompatibility complex class I assembly pathway. The Journal of Biological Chemistry. 285: 4520-35. PMID 19959473 DOI: 10.1074/Jbc.M109.085407  0.822
2009 Thammavongsa V, Schaefer M, Filzen T, Collins KL, Carrington M, Bangia N, Raghavan M. Assembly and intracellular trafficking of HLA-B*3501 and HLA-B*3503. Immunogenetics. 61: 703-16. PMID 19838694 DOI: 10.1007/S00251-009-0399-2  0.806
2008 Raghavan M, Del Cid N, Rizvi SM, Peters LR. MHC class I assembly: out and about. Trends in Immunology. 29: 436-43. PMID 18675588 DOI: 10.1016/J.It.2008.06.004  0.797
2006 Rizvi SM, Raghavan M. Direct peptide-regulatable interactions between MHC class I molecules and tapasin. Proceedings of the National Academy of Sciences of the United States of America. 103: 18220-5. PMID 17116884 DOI: 10.1073/Pnas.0605131103  0.575
2006 Perria CL, Rajamanickam V, Lapinski PE, Raghavan M. Catalytic site modifications of TAP1 and TAP2 and their functional consequences. The Journal of Biological Chemistry. 281: 39839-51. PMID 17068338 DOI: 10.1074/Jbc.M605492200  0.469
2006 Thammavongsa V, Raghuraman G, Filzen TM, Collins KL, Raghavan M. HLA-B44 polymorphisms at position 116 of the heavy chain influence TAP complex binding via an effect on peptide occupancy. Journal of Immunology (Baltimore, Md. : 1950). 177: 3150-61. PMID 16920953 DOI: 10.4049/Jimmunol.177.5.3150  0.792
2005 Procko E, Raghuraman G, Wiley DC, Raghavan M, Gaudet R. Identification of domain boundaries within the N-termini of TAP1 and TAP2 and their importance in tapasin binding and tapasin-mediated increase in peptide loading of MHC class I. Immunology and Cell Biology. 83: 475-82. PMID 16174096 DOI: 10.1111/J.1440-1711.2005.01354.X  0.583
2005 Thammavongsa V, Mancino L, Raghavan M. Polypeptide substrate recognition by calnexin requires specific conformations of the calnexin protein. The Journal of Biological Chemistry. 280: 33497-505. PMID 16061483 DOI: 10.1074/Jbc.M503648200  0.747
2005 Yang T, Lapinski PE, Zhao H, Zhou Q, Zhang H, Raghavan M, Liu Y, Zheng P. A rare transporter associated with antigen processing polymorphism overpresented in HLAlow colon cancer reveals the functional significance of the signature domain in antigen processing. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 11: 3614-23. PMID 15897556 DOI: 10.1158/1078-0432.Ccr-04-1804  0.48
2004 Rizvi SM, Mancino L, Thammavongsa V, Cantley RL, Raghavan M. A polypeptide binding conformation of calreticulin is induced by heat shock, calcium depletion, or by deletion of the C-terminal acidic region. Molecular Cell. 15: 913-23. PMID 15383281 DOI: 10.1016/J.Molcel.2004.09.001  0.728
2003 Lapinski PE, Raghuraman G, Raghavan M. Nucleotide interactions with membrane-bound transporter associated with antigen processing proteins. The Journal of Biological Chemistry. 278: 8229-37. PMID 12501238 DOI: 10.1074/Jbc.M208930200  0.455
2003 Rizvi SM, Raghavan M. Responses of herpes simplex virus type 1-infected cells to the presence of extracellular antibodies: gE-dependent glycoprotein capping and enhancement in cell-to-cell spread. Journal of Virology. 77: 701-8. PMID 12477873 DOI: 10.1128/Jvi.77.1.701-708.2003  0.316
2002 Raghuraman G, Lapinski PE, Raghavan M. Tapasin interacts with the membrane-spanning domains of both TAP subunits and enhances the structural stability of TAP1 x TAP2 Complexes. The Journal of Biological Chemistry. 277: 41786-94. PMID 12213826 DOI: 10.1074/Jbc.M207128200  0.519
2002 Mancino L, Rizvi SM, Lapinski PE, Raghavan M. Calreticulin recognizes misfolded HLA-A2 heavy chains. Proceedings of the National Academy of Sciences of the United States of America. 99: 5931-6. PMID 11983893 DOI: 10.1073/Pnas.092031799  0.791
2001 Arora S, Lapinski PE, Raghavan M. Use of chimeric proteins to investigate the role of transporter associated with antigen processing (TAP) structural domains in peptide binding and translocation. Proceedings of the National Academy of Sciences of the United States of America. 98: 7241-6. PMID 11416206 DOI: 10.1073/Pnas.131132198  0.516
2001 Lapinski PE, Neubig RR, Raghavan M. Walker A lysine mutations of TAP1 and TAP2 interfere with peptide translocation but not peptide binding. The Journal of Biological Chemistry. 276: 7526-33. PMID 11099504 DOI: 10.1074/Jbc.M009448200  0.497
2000 Lapinski PE, Miller GG, Tampé R, Raghavan M. Pairing of the nucleotide binding domains of the transporter associated with antigen processing. The Journal of Biological Chemistry. 275: 6831-40. PMID 10702242 DOI: 10.1074/Jbc.275.10.6831  0.458
1999 Raghavan M. Immunodeficiency due to defective antigen processing: the molecular basis for type 1 bare lymphocyte syndrome. The Journal of Clinical Investigation. 103: 595-6. PMID 10074475 DOI: 10.1172/Jci6455  0.575
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