| Year |
Citation |
Score |
| 2020 |
Marrano A, Britton M, Zaini PA, Zimin AV, Workman RE, Puiu D, Bianco L, Pierro EAD, Allen BJ, Chakraborty S, Troggio M, Leslie CA, Timp W, Dandekar A, Salzberg SL, et al. High-quality chromosome-scale assembly of the walnut (Juglans regia L.) reference genome. Gigascience. 9. PMID 32432329 DOI: 10.1093/Gigascience/Giaa050 |
0.653 |
|
| 2019 |
Trouern-Trend A, Falk T, Zaman S, Caballero M, Neale DB, Langley CH, Dandekar A, Stevens KA, Wegrzyn JL. Comparative Genomics of Six Juglans Species Reveals Disease-associated Gene Family Contractions. The Plant Journal : For Cell and Molecular Biology. PMID 31823432 DOI: 10.1111/Tpj.14630 |
0.32 |
|
| 2019 |
Zhu T, Wang L, You FM, Rodriguez JC, Deal KR, Chen L, Li J, Chakraborty S, Balan B, Jiang CZ, Brown PJ, Leslie CA, Aradhya MK, Dandekar AM, McGuire PE, et al. Sequencing a × hybrid yields high-quality genome assemblies of parental species. Horticulture Research. 6: 55. PMID 30937174 DOI: 10.1038/s41438-019-0139-1 |
0.314 |
|
| 2019 |
Aradhya MK, Velasco D, Wang J, Ramasamy R, You FM, Leslie C, Dandekar A, Luo M, Dvorak J. A fine‐scale genetic linkage map reveals genomic regions associated with economic traits in walnut (Juglans regia) Plant Breeding. 138: 635-646. DOI: 10.1111/Pbr.12703 |
0.329 |
|
| 2018 |
Stevens KA, Woeste K, Chakraborty S, Crepeau MW, Leslie CA, Martínez-García PJ, Puiu D, Romero-Severson J, Coggeshall M, Dandekar AM, Kluepfel D, Neale DB, Salzberg SL, Langley CH. Genomic Variation Among and Within Six Species. G3 (Bethesda, Md.). PMID 29792315 DOI: 10.1534/G3.118.200030 |
0.323 |
|
| 2016 |
Chakraborty S, Martínez-García PJ, Dandekar AM. YeATSAM analysis of the walnut and chickpea transcriptome reveals key genes undetected by current annotation tools. F1000research. 5: 2689. PMID 28105312 DOI: 10.12688/f1000research.10040.1 |
0.331 |
|
| 2016 |
Martínez-García PJ, Crepeau MW, Puiu D, Gonzalez-Ibeas D, Whalen J, Stevens KA, Paul R, Butterfield TS, Britton MT, Reagan RL, Chakraborty S, Walawage SL, Vasquez-Gross HA, Cardeno C, Famula RA, ... ... Dandekar AM, et al. The walnut (Juglans regia) genome sequence reveals diversity in genes coding for the biosynthesis of nonstructural polyphenols. The Plant Journal : For Cell and Molecular Biology. PMID 27145194 DOI: 10.1111/Tpj.13207 |
0.685 |
|
| 2016 |
Chakraborty S, Britton M, Martínez-García PJ, Dandekar AM. Deep RNA-Seq profile reveals biodiversity, plant-microbe interactions and a large family of NBS-LRR resistance genes in walnut (Juglans regia) tissues. Amb Express. 6: 12. PMID 26883051 DOI: 10.1186/S13568-016-0182-3 |
0.669 |
|
| 2015 |
Chakraborty S, Britton M, Wegrzyn J, Butterfield T, Rao BJ, Leslie CA, Aradhaya M, Neale D, Woeste K, Dandekar AM. YeATS - a tool suite for analyzing RNA-seq derived transcriptome identifies a highly transcribed putative extensin in heartwood/sapwood transition zone in black walnut. F1000research. 4: 155. PMID 26870317 DOI: 10.12688/F1000Research.6617.2 |
0.672 |
|
| 2014 |
Martinelli F, Scalenghe R, Giovino A, Marino P, Aksenov AA, Pasamontes A, Peirano DJ, Davis CE, Dandekar A. Proposal of a Citrus translational genomic approach for early and infield detection of Flavescence dorée in Vitis Plant Biosystems. DOI: 10.1080/11263504.2014.908976 |
0.32 |
|
| 2013 |
Walawage SL, Britton MT, Leslie CA, Uratsu SL, Li Y, Dandekar AM. Stacking resistance to crown gall and nematodes in walnut rootstocks. Bmc Genomics. 14: 668. PMID 24083348 DOI: 10.1186/1471-2164-14-668 |
0.642 |
|
| 2013 |
Drakakaki G, Dandekar A. Protein secretion: how many secretory routes does a plant cell have? Plant Science : An International Journal of Experimental Plant Biology. 203: 74-8. PMID 23415330 DOI: 10.1016/J.Plantsci.2012.12.017 |
0.344 |
|
| 2012 |
You FM, Deal KR, Wang J, Britton MT, Fass JN, Lin D, Dandekar AM, Leslie CA, Aradhya M, Luo MC, Dvorak J. Genome-wide SNP discovery in walnut with an AGSNP pipeline updated for SNP discovery in allogamous organisms. Bmc Genomics. 13: 354. PMID 22849334 DOI: 10.1186/1471-2164-13-354 |
0.655 |
|
| 2012 |
Martinelli F, Uratsu SL, Albrecht U, Reagan RL, Phu ML, Britton M, Buffalo V, Fass J, Leicht E, Zhao W, Lin D, D'Souza R, Davis CE, Bowman KD, Dandekar AM. Transcriptome profiling of citrus fruit response to huanglongbing disease. Plos One. 7: e38039. PMID 22675433 DOI: 10.1371/Journal.Pone.0038039 |
0.654 |
|
| 2012 |
Wu J, Gu YQ, Hu Y, You FM, Dandekar AM, Leslie CA, Aradhya M, Dvorak J, Luo MC. Characterizing the walnut genome through analyses of BAC end sequences. Plant Molecular Biology. 78: 95-107. PMID 22101470 DOI: 10.1007/s11103-011-9849-y |
0.301 |
|
| 2011 |
Muir RM, Ibáñez AM, Uratsu SL, Ingham ES, Leslie CA, McGranahan GH, Batra N, Goyal S, Joseph J, Jemmis ED, Dandekar AM. Mechanism of gallic acid biosynthesis in bacteria (Escherichia coli) and walnut (Juglans regia). Plant Molecular Biology. 75: 555-65. PMID 21279669 DOI: 10.1007/S11103-011-9739-3 |
0.599 |
|
| 2009 |
Kumar P, Uratsu S, Dandekar A, Falk BW. Tomato bushy stunt virus recombination guided by introduced microRNA target sequences. Journal of Virology. 83: 10472-9. PMID 19640975 DOI: 10.1128/Jvi.00665-09 |
0.35 |
|
| 2007 |
Pignatta D, Kumar P, Turina M, Dandekar A, Falk BW. Quantitative analysis of efficient endogenous gene silencing in Nicotiana benthamiana plants using tomato bushy stunt virus vectors that retain the capsid protein gene. Molecular Plant-Microbe Interactions : Mpmi. 20: 609-18. PMID 17555269 DOI: 10.1094/Mpmi-20-6-0609 |
0.375 |
|
| 2006 |
Zhou R, Cheng L, Dandekar A. Mechanism of Up-regulation of Starch Synthesis in Mature Leaves of Transgenic Apple Trees with Decreased Sorbitol Synthesis Hortscience. 41: 1009D-1009. DOI: 10.21273/Hortsci.41.4.1009D |
0.333 |
|
| 2005 |
Horn R, Lecouls AC, Callahan A, Dandekar A, Garay L, McCord P, Howad W, Chan H, Verde I, Main D, Jung S, Georgi L, Forrest S, Mook J, Zhebentyayeva T, et al. Candidate gene database and transcript map for peach, a model species for fruit trees. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 110: 1419-28. PMID 15846479 DOI: 10.1007/S00122-005-1968-X |
0.401 |
|
| 2004 |
Zhou* R, Cheng L, Dandekar A. Antisense Inhibition of Sorbitol Synthesis Leads to Changes in the Activity of the Antioxidant System in Apple Leaves Hortscience. 39: 887E-887. DOI: 10.21273/Hortsci.39.4.887E |
0.302 |
|
| 1990 |
Gogorcena Y, Arulsekar S, Dandekar A, Parfitt DE. Rflps For Identification Of Grape Cultivars Hortscience. 25: 1081-1081. DOI: 10.21273/Hortsci.25.9.1081D |
0.301 |
|
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