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Matthew R. Willmann, Ph.D. - Publications

Affiliations: 
2004 Harvard University, Cambridge, MA, United States 
Area:
Plant Pathology Agriculture, Molecular Biology
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32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Wang L, Kaya HB, Zhang N, Rai R, Willmann MR, Carpenter SCD, Read AC, Martin F, Fei Z, Leach JE, Martin GB, Bogdanove AJ. Spelling Changes and Fluorescent Tagging With Prime Editing Vectors for Plants. Frontiers in Genome Editing. 3: 617553. PMID 34713247 DOI: 10.3389/fgeed.2021.617553  0.31
2021 Hua X, Berkowitz ND, Willmann MR, Yu X, Lyons E, Gregory BD. Global Analysis of RNA-Dependent RNA Polymerase-Dependent Small RNAs Reveals New Substrates and Functions for These Proteins and SGS3 in Arabidopsis. Non-Coding Rna. 7. PMID 33925339 DOI: 10.3390/ncrna7020028  0.682
2020 Yu X, Willmann MR, Vandivier LE, Trefely S, Kramer MC, Shapiro J, Guo R, Lyons E, Snyder NW, Gregory BD. Messenger RNA 5' NAD Capping Is a Dynamic Regulatory Epitranscriptome Mark That Is Required for Proper Response to Abscisic Acid in Arabidopsis. Developmental Cell. PMID 33290723 DOI: 10.1016/j.devcel.2020.11.009  0.652
2018 He J, Xu M, Willmann MR, McCormick K, Hu T, Yang L, Starker CG, Voytas DF, Meyers BC, Poethig RS. Threshold-dependent repression of SPL gene expression by miR156/miR157 controls vegetative phase change in Arabidopsis thaliana. Plos Genetics. 14: e1007337. PMID 29672610 DOI: 10.1371/Journal.Pgen.1007337  0.589
2016 Anderson SJ, Willmann MR, Gregory BD. Protein Interaction Profile Sequencing (PIP-seq) in Plants. Current Protocols in Plant Biology. 1: 163-183. PMID 31725981 DOI: 10.1002/cppb.20001  0.635
2016 Yu X, Willmann MR, Anderson SJ, Gregory BD. Genome-Wide Mapping of Uncapped and Cleaved Transcripts Reveals a Role for the Nuclear mRNA Cap-Binding Complex in Co-translational RNA Decay in Arabidopsis. The Plant Cell. PMID 27758893 DOI: 10.1105/Tpc.16.00456  0.682
2014 Gillmor CS, Silva-Ortega CO, Willmann MR, Buendía-Monreal M, Poethig RS. The Arabidopsis Mediator CDK8 module genes CCT (MED12) and GCT (MED13) are global regulators of developmental phase transitions. Development (Cambridge, England). 141: 4580-9. PMID 25377553 DOI: 10.1242/Dev.111229  0.654
2014 Seefried WF, Willmann MR, Clausen RL, Jenik PD. Global Regulation of Embryonic Patterning in Arabidopsis by MicroRNAs. Plant Physiology. 165: 670-687. PMID 24784759 DOI: 10.1104/Pp.114.240846  0.321
2014 Willmann MR, Berkowitz ND, Gregory BD. Improved genome-wide mapping of uncapped and cleaved transcripts in eukaryotes--GMUCT 2.0. Methods (San Diego, Calif.). 67: 64-73. PMID 23867340 DOI: 10.1016/J.Ymeth.2013.07.003  0.666
2013 Vandivier L, Li F, Zheng Q, Willmann M, Chen Y, Gregory B. Arabidopsis mRNA secondary structure correlates with protein function and domains. Plant Signaling & Behavior. 8: e24301. PMID 23603972 DOI: 10.4161/Psb.24301  0.635
2012 Li F, Zheng Q, Vandivier LE, Willmann MR, Chen Y, Gregory BD. Regulatory impact of RNA secondary structure across the Arabidopsis transcriptome. The Plant Cell. 24: 4346-59. PMID 23150631 DOI: 10.1105/Tpc.112.104232  0.707
2012 Barr MS, Willmann MR, Jenik PD. Is there a role for trihelix transcription factors in embryo maturation? Plant Signaling & Behavior. 7: 205-9. PMID 22353863 DOI: 10.4161/Psb.18893  0.468
2011 Willmann MR, Endres MW, Cook RT, Gregory BD. The Functions of RNA-Dependent RNA Polymerases in Arabidopsis. The Arabidopsis Book / American Society of Plant Biologists. 9: e0146. PMID 22303271 DOI: 10.1199/Tab.0146  0.699
2011 McCormick KP, Willmann MR, Meyers BC. Experimental design, preprocessing, normalization and differential expression analysis of small RNA sequencing experiments. Silence. 2: 2. PMID 21356093 DOI: 10.1186/1758-907X-2-2  0.345
2011 Willmann MR, Mehalick AJ, Packer RL, Jenik PD. MicroRNAs regulate the timing of embryo maturation in Arabidopsis. Plant Physiology. 155: 1871-84. PMID 21330492 DOI: 10.1104/Pp.110.171355  0.442
2011 Willmann MR, Poethig RS. The effect of the floral repressor FLC on the timing and progression of vegetative phase change in Arabidopsis. Development (Cambridge, England). 138: 677-85. PMID 21228003 DOI: 10.1242/Dev.057448  0.643
2010 Boudsocq M, Willmann MR, McCormack M, Lee H, Shan L, He P, Bush J, Cheng SH, Sheen J. Differential innate immune signalling via Ca(2+) sensor protein kinases. Nature. 464: 418-22. PMID 20164835 DOI: 10.1038/Nature08794  0.629
2010 Gillmor S, Willmann M, Poethig S. Temporal regulation of development by the MED12–MED13 module of Arabidopsis mediator Developmental Biology. 344: 462. DOI: 10.1016/J.Ydbio.2010.05.199  0.331
2009 Smith MR, Willmann MR, Wu G, Berardini TZ, Möller B, Weijers D, Poethig RS. Cyclophilin 40 is required for microRNA activity in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 106: 5424-9. PMID 19289849 DOI: 10.1073/Pnas.0812729106  0.649
2007 Willmann MR, Poethig RS. Conservation and evolution of miRNA regulatory programs in plant development. Current Opinion in Plant Biology. 10: 503-11. PMID 17709279 DOI: 10.1016/J.Pbi.2007.07.004  0.645
2006 Poethig RS, Peragine A, Yoshikawa M, Hunter C, Willmann M, Wu G. The function of RNAi in plant development. Cold Spring Harbor Symposia On Quantitative Biology. 71: 165-70. PMID 17381293 DOI: 10.1101/Sqb.2006.71.030  0.698
2006 Hunter C, Willmann MR, Wu G, Yoshikawa M, de la Luz Gutiérrez-Nava M, Poethig SR. Trans-acting siRNA-mediated repression of ETTIN and ARF4 regulates heteroblasty in Arabidopsis. Development (Cambridge, England). 133: 2973-81. PMID 16818444 DOI: 10.1242/Dev.02491  0.701
2005 Willmann MR, Poethig RS. Time to grow up: the temporal role of smallRNAs in plants. Current Opinion in Plant Biology. 8: 548-52. PMID 16043388 DOI: 10.1016/J.Pbi.2005.07.008  0.705
2002 Cheng SH, Willmann MR, Chen HC, Sheen J. Calcium signaling through protein kinases. The Arabidopsis calcium-dependent protein kinase gene family. Plant Physiology. 129: 469-85. PMID 12068094 DOI: 10.1104/Pp.005645  0.606
2002 Asai T, Tena G, Plotnikova J, Willmann MR, Chiu WL, Gomez-Gomez L, Boller T, Ausubel FM, Sheen J. Map kinase signalling cascade in Arabidopsis innate immunity Nature. 415: 977-983. PMID 11875555 DOI: 10.1038/415977A  0.701
2002 Willmann MR. Plant defense in the absence of jasmonic acid. Trends in Plant Science. 7: 8-9. PMID 11804818 DOI: 10.1016/S1360-1385(01)02218-X  0.335
2002 Willmann MR. Small RNAs with a not-so-small role in Arabidopsis Trends in Plant Science. 7: 430. DOI: 10.1016/S1360-1385(02)02352-X  0.489
2002 Willmann MR. Restriction of anti-florigenic signals from the shoot apex during floral induction? Trends in Plant Science. 7: 289. DOI: 10.1016/S1360-1385(02)02272-0  0.328
2001 Eckardt NA, Cho HT, Perrin RM, Willmann MR. Plant biology 2001. The Plant Cell. 13: 2165-73. PMID 11595794 DOI: 10.1105/Tpc.131020  0.343
2001 Willmann MR. Unravelling PTGS: SDE3 - an RNA helicase involved in RNA silencing in Arabidopsis. Trends in Plant Science. 6: 344-5. PMID 11495769 DOI: 10.1016/S1360-1385(01)02040-4  0.46
2001 Willmann MR. Arabidopsis enters the post-sequencing era. Trends in Plant Science. 6: 51. PMID 11173275 DOI: 10.1016/S1360-1385(00)01857-4  0.433
2000 Willmann MR. Sterols as regulators of plant embryogenesis. Trends in Plant Science. 5: 416. PMID 11044715 DOI: 10.1016/S1360-1385(00)91717-5  0.374
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