| Year |
Citation |
Score |
| 2023 |
Ware CB, Jonlin EC, Anderson DJ, Cavanaugh C, Hesson J, Sidhu S, Cook S, Villagomez-Olea G, Horwitz MS, Wang Y, Mathieu J. Derivation of Naïve Human Embryonic Stem Cells Using a CHK1 Inhibitor. Stem Cell Reviews and Reports. PMID 37702917 DOI: 10.1007/s12015-023-10613-2 |
0.305 |
|
| 2020 |
Kim HJ, Yardımcı GG, Bonora G, Ramani V, Liu J, Qiu R, Lee C, Hesson J, Ware CB, Shendure J, Duan Z, Noble WS. Capturing cell type-specific chromatin compartment patterns by applying topic modeling to single-cell Hi-C data. Plos Computational Biology. 16: e1008173. PMID 32946435 DOI: 10.1371/Journal.Pcbi.1008173 |
0.341 |
|
| 2020 |
Ehnes DD, Hussein AM, Ware CB, Mathieu J, Ruohola-Baker H. Combinatorial metabolism drives the naive to primed pluripotent chromatin landscape. Experimental Cell Research. 111913. PMID 32084392 DOI: 10.1016/J.Yexcr.2020.111913 |
0.318 |
|
| 2020 |
Hussein AM, Wang Y, Mathieu J, Margaretha L, Song C, Jones DC, Cavanaugh C, Miklas JW, Mahen E, Showalter MR, Ruzzo WL, Fiehn O, Ware CB, Blau CA, Ruohola-Baker H. Metabolic Control over mTOR-Dependent Diapause-like State. Developmental Cell. 52: 236-250.e7. PMID 31991105 DOI: 10.1016/J.Devcel.2019.12.018 |
0.324 |
|
| 2019 |
Yang W, Lampe PD, Kensel-Hammes P, Hesson J, Ware CB, Crisa L, Cirulli V. Connexin 43 Functions as a Positive Regulator of Stem Cell Differentiation into Definitive Endoderm and Pancreatic Progenitors. Iscience. 19: 450-460. PMID 31430690 DOI: 10.1016/J.Isci.2019.07.033 |
0.433 |
|
| 2019 |
Battle SL, Doni Jayavelu N, Azad RN, Hesson J, Ahmed FN, Overbey EG, Zoller JA, Mathieu J, Ruohola-Baker H, Ware CB, Hawkins RD. Enhancer Chromatin and 3D Genome Architecture Changes from Naive to Primed Human Embryonic Stem Cell States. Stem Cell Reports. PMID 31056477 DOI: 10.1016/J.Stemcr.2019.04.004 |
0.342 |
|
| 2019 |
Mathieu J, Detraux D, Kuppers D, Wang Y, Cavanaugh C, Sidhu S, Levy S, Robitaille AM, Ferreccio A, Bottorff T, McAlister A, Somasundaram L, Artoni F, Battle S, Hawkins RD, ... ... Ware CB, et al. Folliculin regulates mTORC1/2 and WNT pathways in early human pluripotency. Nature Communications. 10: 632. PMID 30733432 DOI: 10.1038/S41467-018-08020-0 |
0.413 |
|
| 2018 |
Ferreccio A, Mathieu J, Detraux D, Logeshwaran S, Cavanaugh C, Sopher B, Fischer K, Bello T, Hussein AM, Levy S, Cook S, Sidhu SB, Artoni F, Palpant NJ, Reinecke H, ... ... Ware C, et al. Inducible CRISPR genome editing platform in naive human embryonic stem cells reveals JARID2 function in self-renewal. Cell Cycle (Georgetown, Tex.). 0. PMID 29466914 DOI: 10.1080/15384101.2018.1442621 |
0.409 |
|
| 2017 |
Choi M, Genereux DP, Goodson J, Al-Azzawi H, Allain SQ, Simon N, Palasek S, Ware CB, Cavanaugh C, Miller DG, Johnson WC, Sinclair KD, Stöger R, Laird CD. Epigenetic memory via concordant DNA methylation is inversely correlated to developmental potential of mammalian cells. Plos Genetics. 13: e1007060. PMID 29107996 DOI: 10.1371/Journal.Pgen.1007060 |
0.318 |
|
| 2016 |
Ware CB. Concise Review: Lessons from Naïve Human Pluripotent Cells. Stem Cells (Dayton, Ohio). PMID 27663171 DOI: 10.1002/Stem.2507 |
0.409 |
|
| 2016 |
Borges GT, Vêncio EF, Quek SI, Chen A, Salvanha DM, Vêncio RZ, Nguyen HM, Vessella RL, Cavanaugh C, Ware CB, Troisch P, Liu AY. Conversion of Prostate Adenocarcinoma to Small Cell Carcinoma-Like by Reprogramming. Journal of Cellular Physiology. PMID 26773436 DOI: 10.1002/Jcp.25313 |
0.452 |
|
| 2016 |
Borges G, Vencio E, Quek S, Chen A, Salvanha D, Vencio R, Nguyen H, Vessella R, Cavanaugh C, Ware C, Troisch P, Liu A. Mp62-18 Conversion Of Adenocarcinoma To Small Cell Carcinoma-Like By Reprogramming The Journal of Urology. 195. DOI: 10.1016/J.Juro.2016.02.926 |
0.317 |
|
| 2015 |
Sperber H, Mathieu J, Wang Y, Ferreccio A, Hesson J, Xu Z, Fischer KA, Devi A, Detraux D, Gu H, Battle SL, Showalter M, Valensisi C, Bielas JH, Ericson NG, ... ... Ware CB, et al. The metabolome regulates the epigenetic landscape during naive-to-primed human embryonic stem cell transition. Nature Cell Biology. PMID 26571212 DOI: 10.1038/Ncb3264 |
0.477 |
|
| 2015 |
La Torre A, Hoshino A, Cavanaugh C, Ware CB, Reh TA. The GIPC1-Akt1 Pathway Is Required for the Specification of the Eye Field in Mouse Embryonic Stem Cells. Stem Cells (Dayton, Ohio). 33: 2674-85. PMID 26013465 DOI: 10.1002/Stem.2062 |
0.3 |
|
| 2015 |
Grow EJ, Flynn RA, Chavez SL, Bayless NL, Wossidlo M, Wesche DJ, Martin L, Ware CB, Blish CA, Chang HY, Pera RA, Wysocka J. Intrinsic retroviral reactivation in human preimplantation embryos and pluripotent cells. Nature. 522: 221-5. PMID 25896322 DOI: 10.1038/Nature14308 |
0.406 |
|
| 2015 |
Ma W, Ay F, Lee C, Gulsoy G, Deng X, Cook S, Hesson J, Cavanaugh C, Ware CB, Krumm A, Shendure J, Blau CA, Disteche CM, Noble WS, Duan Z. Fine-scale chromatin interaction maps reveal the cis-regulatory landscape of human lincRNA genes. Nature Methods. 12: 71-8. PMID 25437436 DOI: 10.1038/Nmeth.3205 |
0.308 |
|
| 2015 |
Borges GT, Vêncio EF, Vêncio RZ, Vessella RL, Ware CB, Liu AY. Reprogramming of prostate cancer cells--technical challenges. Current Urology Reports. 16: 468. PMID 25404182 DOI: 10.1007/S11934-014-0468-4 |
0.414 |
|
| 2014 |
Ware CB. Naive embryonic stem cells: the future of stem cell research? Regenerative Medicine. 9: 401-3. PMID 25159054 DOI: 10.2217/Rme.14.31 |
0.415 |
|
| 2014 |
Ware CB, Nelson AM, Mecham B, Hesson J, Zhou W, Jonlin EC, Jimenez-Caliani AJ, Deng X, Cavanaugh C, Cook S, Tesar PJ, Okada J, Margaretha L, Sperber H, Choi M, et al. Derivation of naive human embryonic stem cells. Proceedings of the National Academy of Sciences of the United States of America. 111: 4484-9. PMID 24623855 DOI: 10.1073/Pnas.1319738111 |
0.469 |
|
| 2013 |
Mathieu J, Zhang Z, Nelson A, Lamba DA, Reh TA, Ware C, Ruohola-Baker H. Hypoxia induces re-entry of committed cells into pluripotency. Stem Cells (Dayton, Ohio). 31: 1737-48. PMID 23765801 DOI: 10.1002/Stem.1446 |
0.453 |
|
| 2013 |
Yu DH, Ware C, Waterland RA, Zhang J, Chen MH, Gadkari M, Kunde-Ramamoorthy G, Nosavanh LM, Shen L. Developmentally programmed 3' CpG island methylation confers tissue- and cell-type-specific transcriptional activation. Molecular and Cellular Biology. 33: 1845-58. PMID 23459939 DOI: 10.1128/Mcb.01124-12 |
0.348 |
|
| 2012 |
Zhou W, Choi M, Margineantu D, Margaretha L, Hesson J, Cavanaugh C, Blau CA, Horwitz MS, Hockenbery D, Ware C, Ruohola-Baker H. HIF1α induced switch from bivalent to exclusively glycolytic metabolism during ESC-to-EpiSC/hESC transition. The Embo Journal. 31: 2103-16. PMID 22446391 DOI: 10.1038/Emboj.2012.71 |
0.419 |
|
| 2012 |
Vêncio EF, Nelson AM, Cavanaugh C, Ware CB, Milller DG, Garcia JC, Vêncio RZ, Loprieno MA, Liu AY. Reprogramming of prostate cancer-associated stromal cells to embryonic stem-like. The Prostate. 72: 1453-63. PMID 22314551 DOI: 10.1002/Pros.22497 |
0.464 |
|
| 2011 |
Mathieu J, Zhang Z, Zhou W, Wang AJ, Heddleston JM, Pinna CM, Hubaud A, Stadler B, Choi M, Bar M, Tewari M, Liu A, Vessella R, Rostomily R, Born D, ... ... Ware C, et al. HIF induces human embryonic stem cell markers in cancer cells. Cancer Research. 71: 4640-52. PMID 21712410 DOI: 10.1158/0008-5472.Can-10-3320 |
0.407 |
|
| 2011 |
Pascal LE, Vêncio RZ, Vessella RL, Ware CB, Vêncio EF, Denyer G, Liu AY. Lineage relationship of prostate cancer cell types based on gene expression. Bmc Medical Genomics. 4: 46. PMID 21605402 DOI: 10.1186/1755-8794-4-46 |
0.404 |
|
| 2011 |
Vencio E, Nelson A, Cavanaugh C, Ware C, Miller D, Loprieno M, Liu A. 167 CONVERSION OF PROSTATE CANCER-ASSOCIATED STROMAL CELLS INTO STEM-LIKE CELLS BY IPS TECHNOLOGY Journal of Urology. 185. DOI: 10.1016/J.Juro.2011.02.236 |
0.367 |
|
| 2011 |
Pascal L, Vencio R, Vessella R, Ware C, Vencio E, Denyer G, Liu A. 140 Prostate Cancer Cell Types Based On Gene Expression The Journal of Urology. 185. DOI: 10.1016/J.Juro.2011.02.207 |
0.306 |
|
| 2010 |
Snider L, Geng LN, Lemmers RJ, Kyba M, Ware CB, Nelson AM, Tawil R, Filippova GN, van der Maarel SM, Tapscott SJ, Miller DG. Facioscapulohumeral dystrophy: incomplete suppression of a retrotransposed gene. Plos Genetics. 6: e1001181. PMID 21060811 DOI: 10.1371/Journal.Pgen.1001181 |
0.339 |
|
| 2010 |
Khan IF, Hirata RK, Wang PR, Li Y, Kho J, Nelson A, Huo Y, Zavaljevski M, Ware C, Russell DW. Engineering of human pluripotent stem cells by AAV-mediated gene targeting Molecular Therapy. 18: 1192-1199. PMID 20407427 DOI: 10.1038/Mt.2010.55 |
0.413 |
|
| 2010 |
Stadler B, Ivanovska I, Mehta K, Song S, Nelson A, Tan Y, Mathieu J, Darby C, Blau CA, Ware C, Peters G, Miller DG, Shen L, Cleary MA, Ruohola-Baker H. Characterization of microRNAs involved in embryonic stem cell states. Stem Cells and Development. 19: 935-50. PMID 20128659 DOI: 10.1089/Scd.2009.0426 |
0.362 |
|
| 2009 |
Qi J, Yu JY, Shcherbata HR, Mathieu J, Wang AJ, Seal S, Zhou W, Stadler BM, Bourgin D, Wang L, Nelson A, Ware C, Raymond C, Lim LP, Magnus J, et al. microRNAs regulate human embryonic stem cell division. Cell Cycle (Georgetown, Tex.). 8: 3729-41. PMID 19823043 DOI: 10.4161/Cc.8.22.10033 |
0.37 |
|
| 2009 |
Ware CB, Wang L, Mecham BH, Shen L, Nelson AM, Bar M, Lamba DA, Dauphin DS, Buckingham B, Askari B, Lim R, Tewari M, Gartler SM, Issa JP, Pavlidis P, et al. Histone deacetylase inhibition elicits an evolutionarily conserved self-renewal program in embryonic stem cells. Cell Stem Cell. 4: 359-69. PMID 19341625 DOI: 10.1016/J.Stem.2009.03.001 |
0.424 |
|
| 2008 |
Chang KH, Nelson AM, Fields PA, Hesson JL, Ulyanova T, Cao H, Nakamoto B, Ware CB, Papayannopoulou T. Diverse hematopoietic potentials of five human embryonic stem cell lines. Experimental Cell Research. 314: 2930-40. PMID 18692044 DOI: 10.1016/J.Yexcr.2008.07.019 |
0.423 |
|
| 2008 |
Bonig H, Chang KH, Geisen C, Seifried E, Ware C. Blood types of current embryonic stem cell lines are not conducive to culturing "universal-donor" red blood cells. Transfusion. 48: 1039-40. PMID 18454742 DOI: 10.1111/J.1537-2995.2008.01706.X |
0.369 |
|
| 2008 |
Hall LL, Byron M, Butler J, Becker KA, Nelson A, Amit M, Itskovitz-Eldor J, Stein J, Stein G, Ware C, Lawrence JB. X-inactivation reveals epigenetic anomalies in most hESC but identifies sublines that initiate as expected. Journal of Cellular Physiology. 216: 445-52. PMID 18340642 DOI: 10.1002/Jcp.21411 |
0.403 |
|
| 2007 |
Ware CB, Baran SW. A controlled-cooling protocol for cryopreservation of human and non-human primate embryonic stem cells. Methods in Molecular Biology (Clifton, N.J.). 407: 43-9. PMID 18453247 DOI: 10.1007/978-1-59745-536-7_4 |
0.424 |
|
| 2007 |
Wang L, Schulz TC, Sherrer ES, Dauphin DS, Shin S, Nelson AM, Ware CB, Zhan M, Song CZ, Chen X, Brimble SN, McLean A, Galeano MJ, Uhl EW, D'Amour KA, et al. Self-renewal of human embryonic stem cells requires insulin-like growth factor-1 receptor and ERBB2 receptor signaling. Blood. 110: 4111-9. PMID 17761519 DOI: 10.1182/Blood-2007-03-082586 |
0.328 |
|
| 2007 |
Gharwan H, Hirata RK, Wang P, Richard RE, Wang L, Olson E, Allen J, Ware CB, Russell DW. Transduction of human embryonic stem cells by foamy virus vectors. Molecular Therapy : the Journal of the American Society of Gene Therapy. 15: 1827-33. PMID 17622243 DOI: 10.1038/Sj.Mt.6300244 |
0.437 |
|
| 2007 |
Baran SW, Ware CB. Cryopreservation of rhesus macaque embryonic stem cells. Stem Cells and Development. 16: 339-44. PMID 17521244 DOI: 10.1089/Scd.2007.900-De |
0.441 |
|
| 2007 |
Nussbaum J, Minami E, Laflamme MA, Virag JA, Ware CB, Masino A, Muskheli V, Pabon L, Reinecke H, Murry CE. Transplantation of undifferentiated murine embryonic stem cells in the heart: teratoma formation and immune response. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 21: 1345-57. PMID 17284483 DOI: 10.1096/Fj.06-6769Com |
0.387 |
|
| 2006 |
Ware CB, Nelson AM, Blau CA. A comparison of NIH-approved human ESC lines. Stem Cells (Dayton, Ohio). 24: 2677-84. PMID 16916927 DOI: 10.1634/Stemcells.2005-0452 |
0.336 |
|
| 2006 |
Lamba DA, Karl MO, Ware CB, Reh TA. Efficient generation of retinal progenitor cells from human embryonic stem cells. Proceedings of the National Academy of Sciences of the United States of America. 103: 12769-74. PMID 16908856 DOI: 10.1073/Pnas.0601990103 |
0.377 |
|
| 2006 |
Chang KH, Nelson AM, Cao H, Wang L, Nakamoto B, Ware CB, Papayannopoulou T. Definitive-like erythroid cells derived from human embryonic stem cells coexpress high levels of embryonic and fetal globins with little or no adult globin. Blood. 108: 1515-23. PMID 16645170 DOI: 10.1182/Blood-2005-11-011874 |
0.446 |
|
| 2005 |
Rubin BP, Antonescu CR, Scott-Browne JP, Comstock ML, Gu Y, Tanas MR, Ware CB, Woodell J. A knock-in mouse model of gastrointestinal stromal tumor harboring kit K641E. Cancer Research. 65: 6631-9. PMID 16061643 DOI: 10.1158/0008-5472.Can-05-0891 |
0.354 |
|
| 2005 |
Blau CA, Nelson A, Ware CB. NIH-Funded Research Using Human Embryonic Stem Cells. Blood. 106: 4232-4232. DOI: 10.1182/Blood.V106.11.4232.4232 |
0.418 |
|
| 2003 |
Ware CB, Siverts LA, Nelson AM, Morton JF, Ladiges WC. Utility of a C57BL/6 ES line versus 129 ES lines for targeted mutations in mice. Transgenic Research. 12: 743-6. PMID 14713204 DOI: 10.1023/B:Trag.0000005246.35812.C8 |
0.321 |
|
| 2003 |
Libby RT, Monckton DG, Fu YH, Martinez RA, McAbney JP, Lau R, Einum DD, Nichol K, Ware CB, Ptacek LJ, Pearson CE, La Spada AR. Genomic context drives SCA7 CAG repeat instability, while expressed SCA7 cDNAs are intergenerationally and somatically stable in transgenic mice. Human Molecular Genetics. 12: 41-50. PMID 12490531 DOI: 10.1093/Hmg/Ddg006 |
0.307 |
|
| 2002 |
Garden GA, Libby RT, Fu YH, Kinoshita Y, Huang J, Possin DE, Smith AC, Martinez RA, Fine GC, Grote SK, Ware CB, Einum DD, Morrison RS, Ptacek LJ, Sopher BL, et al. Polyglutamine-expanded ataxin-7 promotes non-cell-autonomous purkinje cell degeneration and displays proteolytic cleavage in ataxic transgenic mice. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 22: 4897-905. PMID 12077187 DOI: 10.1523/Jneurosci.22-12-04897.2002 |
0.391 |
|
| 2002 |
Ladiges W, Morton J, Hopkins H, Wilson R, Filley G, Ware C, Gale M. Expression of human PKR protein kinase in transgenic mice. Journal of Interferon & Cytokine Research : the Official Journal of the International Society For Interferon and Cytokine Research. 22: 329-34. PMID 12034040 DOI: 10.1089/107999002753675758 |
0.377 |
|
| 2001 |
Sanders G, Ware C, Ladiges W. Transgenic and gene-targeted mouse lines for toxicology studies Current Protocols in Toxicology / Editorial Board, Mahin D. Maines (Editor-in-Chief) ... [Et Al.]. PMID 20972959 DOI: 10.1002/0471140856.Txa01Bs01 |
0.309 |
|
| 1999 |
Barasch J, Yang J, Ware CB, Taga T, Yoshida K, Erdjument-Bromage H, Tempst P, Parravicini E, Malach S, Aranoff T, Oliver JA. Mesenchymal to epithelial conversion in rat metanephros is induced by LIF. Cell. 99: 377-86. PMID 10571180 DOI: 10.1016/S0092-8674(00)81524-X |
0.334 |
|
| 1998 |
Koblar SA, Turnley AM, Classon BJ, Reid KL, Ware CB, Cheema SS, Murphy M, Bartlett PF. Neural precursor differentiation into astrocytes requires signaling through the leukemia inhibitory factor receptor. Proceedings of the National Academy of Sciences of the United States of America. 95: 3178-81. PMID 9501236 DOI: 10.1073/Pnas.95.6.3178 |
0.386 |
|
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