Jean-Baptiste Sibarita, Ph.D. - Publications

Quantitative Imaging of the Cell Interdisciplinary Institute for Neuroscience 

68 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Mehidi A, Rossier O, Schaks M, Chazeau A, Binamé F, Remorino A, Coppey M, Karatas Z, Sibarita JB, Rottner K, Moreau V, Giannone G. Transient Activations of Rac1 at the Lamellipodium Tip Trigger Membrane Protrusion. Current Biology : Cb. PMID 31422887 DOI: 10.1016/j.cub.2019.07.035  0.6
2019 Levet F, Julien G, Galland R, Butler C, Beghin A, Chazeau A, Hoess P, Ries J, Giannone G, Sibarita JB. A tessellation-based colocalization analysis approach for single-molecule localization microscopy. Nature Communications. 10: 2379. PMID 31147535 DOI: 10.1038/s41467-019-10007-4  0.6
2018 Kellermayer B, Ferreira JS, Dupuis J, Levet F, Grillo-Bosch D, Bard L, Linarès-Loyez J, Bouchet D, Choquet D, Rusakov DA, Bon P, Sibarita JB, Cognet L, Sainlos M, Carvalho AL, et al. Differential Nanoscale Topography and Functional Role of GluN2-NMDA Receptor Subtypes at Glutamatergic Synapses. Neuron. PMID 30269991 DOI: 10.1016/j.neuron.2018.09.012  0.6
2018 Floc'h K, Lacroix F, Barbieri L, Servant P, Galland R, Butler C, Sibarita JB, Bourgeois D, Timmins J. Bacterial cell wall nanoimaging by autoblinking microscopy. Scientific Reports. 8: 14038. PMID 30232348 DOI: 10.1038/s41598-018-32335-z  0.52
2017 Beghin A, Kechkar A, Butler C, Levet F, Cabillic M, Rossier O, Giannone G, Galland R, Choquet D, Sibarita JB. Localization-based super-resolution imaging meets high-content screening. Nature Methods. PMID 29083400 DOI: 10.1038/nmeth.4486  0.6
2017 Singh AP, Galland R, Finch-Edmondson ML, Grenci G, Sibarita JB, Studer V, Viasnoff V, Saunders TE. 3D Protein Dynamics in the Cell Nucleus. Biophysical Journal. 112: 133-142. PMID 28076804 DOI: 10.1016/j.bpj.2016.11.3196  0.36
2016 Chamma I, Levet F, Sibarita JB, Sainlos M, Thoumine O. Nanoscale organization of synaptic adhesion proteins revealed by single-molecule localization microscopy. Neurophotonics. 3: 041810. PMID 27872870 DOI: 10.1117/1.NPh.3.4.041810  0.52
2016 Widera D, Klenke C, Nair D, Heidbreder M, Malkusch S, Sibarita JB, Choquet D, Kaltschmidt B, Heilemann M, Kaltschmidt C. Single-particle tracking uncovers dynamics of glutamate-induced retrograde transport of NF-κB p65 in living neurons. Neurophotonics. 3: 041804. PMID 27226975 DOI: 10.1117/1.NPh.3.4.041804  0.6
2016 Chamma I, Letellier M, Butler C, Tessier B, Lim KH, Gauthereau I, Choquet D, Sibarita JB, Park S, Sainlos M, Thoumine O. Mapping the dynamics and nanoscale organization of synaptic adhesion proteins using monomeric streptavidin. Nature Communications. 7: 10773. PMID 26979420 DOI: 10.1038/ncomms10773  0.6
2015 Levet F, Hosy E, Kechkar A, Butler C, Beghin A, Choquet D, Sibarita JB. SR-Tesseler: a method to segment and quantify localization-based super-resolution microscopy data. Nature Methods. PMID 26344046 DOI: 10.1038/nmeth.3579  0.6
2015 Garcia M, Leduc C, Lagardère M, Argento A, Sibarita JB, Thoumine O. Two-tiered coupling between flowing actin and immobilized N-cadherin/catenin complexes in neuronal growth cones. Proceedings of the National Academy of Sciences of the United States of America. 112: 6997-7002. PMID 26038554 DOI: 10.1073/pnas.1423455112  0.6
2015 Galland R, Grenci G, Aravind A, Viasnoff V, Studer V, Sibarita JB. 3D high- and super-resolution imaging using single-objective SPIM. Nature Methods. 12: 641-4. PMID 25961414 DOI: 10.1038/nmeth.3402  0.6
2015 Jose M, Tollis S, Nair D, Mitteau R, Velours C, Massoni-Laporte A, Royou A, Sibarita JB, McCusker D. A quantitative imaging-based screen reveals the exocyst as a network hub connecting endocytosis and exocytosis. Molecular Biology of the Cell. 26: 2519-34. PMID 25947137 DOI: 10.1091/mbc.E14-11-1527  0.6
2015 Wang T, Martin S, Papadopulos A, Harper CB, Mavlyutov TA, Niranjan D, Glass NR, Cooper-White JJ, Sibarita JB, Choquet D, Davletov B, Meunier FA. Control of autophagosome axonal retrograde flux by presynaptic activity unveiled using botulinum neurotoxin type a. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 35: 6179-94. PMID 25878289 DOI: 10.1523/JNEUROSCI.3757-14.2015  0.6
2014 Chazeau A, Mehidi A, Nair D, Gautier JJ, Leduc C, Chamma I, Kage F, Kechkar A, Thoumine O, Rottner K, Choquet D, Gautreau A, Sibarita JB, Giannone G. Nanoscale segregation of actin nucleation and elongation factors determines dendritic spine protrusion. The Embo Journal. 33: 2745-64. PMID 25293574 DOI: 10.15252/embj.201488837  0.6
2014 Hosy E, Butler C, Sibarita JB. Organization and dynamics of AMPA receptors inside synapses-nano-organization of AMPA receptors and main synaptic scaffolding proteins revealed by super-resolution imaging. Current Opinion in Chemical Biology. 20: 120-6. PMID 24975376 DOI: 10.1016/j.cbpa.2014.05.017  0.6
2014 Hanus C, Kochen L, Tom Dieck S, Racine V, Sibarita JB, Schuman EM, Ehlers MD. Synaptic control of secretory trafficking in dendrites. Cell Reports. 7: 1771-8. PMID 24931613 DOI: 10.1016/j.celrep.2014.05.028  0.6
2014 Petrini EM, Ravasenga T, Hausrat TJ, Iurilli G, Olcese U, Racine V, Sibarita JB, Jacob TC, Moss SJ, Benfenati F, Medini P, Kneussel M, Barberis A. Synaptic recruitment of gephyrin regulates surface GABAA receptor dynamics for the expression of inhibitory LTP. Nature Communications. 5: 3921. PMID 24894704 DOI: 10.1038/ncomms4921  0.6
2014 Sibarita JB. High-density single-particle tracking: quantifying molecule organization and dynamics at the nanoscale. Histochemistry and Cell Biology. 141: 587-95. PMID 24671496 DOI: 10.1007/s00418-014-1214-1  0.6
2014 Biermann B, Sokoll S, Klueva J, Missler M, Wiegert JS, Sibarita JB, Heine M. Imaging of molecular surface dynamics in brain slices using single-particle tracking. Nature Communications. 5: 3024. PMID 24429796 DOI: 10.1038/ncomms4024  0.6
2013 Fraisier V, Kasri A, Miserey-Lenkei S, Sibarita JB, Nair D, Mayeux A, Bardin S, Toyoda Y, Poser I, Poznyakovskiy A, Goud B, Hyman AA, Dimitrov A. C11ORF24 is a novel type I membrane protein that cycles between the Golgi apparatus and the plasma membrane in Rab6-positive vesicles. Plos One. 8: e82223. PMID 24312644 DOI: 10.1371/journal.pone.0082223  0.6
2013 Nair D, Hosy E, Petersen JD, Constals A, Giannone G, Choquet D, Sibarita JB. Super-resolution imaging reveals that AMPA receptors inside synapses are dynamically organized in nanodomains regulated by PSD95. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 13204-24. PMID 23926273 DOI: 10.1523/JNEUROSCI.2381-12.2013  0.6
2013 Winckler P, Lartigue L, Giannone G, De Giorgi F, Ichas F, Sibarita JB, Lounis B, Cognet L. Identification and super-resolution imaging of ligand-activated receptor dimers in live cells. Scientific Reports. 3: 2387. PMID 23925048 DOI: 10.1038/srep02387  0.6
2013 Wentzel C, Sommer JE, Nair R, Stiefvater A, Sibarita JB, Scheiffele P. mSYD1A, a mammalian synapse-defective-1 protein, regulates synaptogenic signaling and vesicle docking. Neuron. 78: 1012-23. PMID 23791195 DOI: 10.1016/j.neuron.2013.05.010  0.6
2013 Kechkar A, Nair D, Heilemann M, Choquet D, Sibarita JB. Real-time analysis and visualization for single-molecule based super-resolution microscopy. Plos One. 8: e62918. PMID 23646160 DOI: 10.1371/journal.pone.0062918  0.6
2013 Jose M, Tollis S, Nair D, Sibarita JB, McCusker D. Robust polarity establishment occurs via an endocytosis-based cortical corralling mechanism. The Journal of Cell Biology. 200: 407-18. PMID 23401000 DOI: 10.1083/jcb.201206081  0.6
2013 Giannone G, Hosy E, Sibarita JB, Choquet D, Cognet L. High-content super-resolution imaging of live cell by uPAINT. Methods in Molecular Biology (Clifton, N.J.). 950: 95-110. PMID 23086872 DOI: 10.1007/978-1-62703-137-0_7  0.6
2012 Sibarita JB, Heilemann M. Targeting, resolving and quantifying cellular structures by single-molecule localization microscopy. Embo Reports. 13: 1043-5. PMID 23146894 DOI: 10.1038/embor.2012.177  0.6
2012 Hoze N, Nair D, Hosy E, Sieben C, Manley S, Herrmann A, Sibarita JB, Choquet D, Holcman D. Heterogeneity of AMPA receptor trafficking and molecular interactions revealed by superresolution analysis of live cell imaging. Proceedings of the National Academy of Sciences of the United States of America. 109: 17052-7. PMID 23035245 DOI: 10.1073/pnas.1204589109  0.6
2012 Rossier O, Octeau V, Sibarita JB, Leduc C, Tessier B, Nair D, Gatterdam V, Destaing O, Albigès-Rizo C, Tampé R, Cognet L, Choquet D, Lounis B, Giannone G. Integrins β1 and β3 exhibit distinct dynamic nanoscale organizations inside focal adhesions. Nature Cell Biology. 14: 1057-67. PMID 23023225 DOI: 10.1038/ncb2588  0.6
2012 Heidbreder M, Zander C, Malkusch S, Widera D, Kaltschmidt B, Kaltschmidt C, Nair D, Choquet D, Sibarita JB, Heilemann M. TNF-α influences the lateral dynamics of TNF receptor I in living cells. Biochimica Et Biophysica Acta. 1823: 1984-9. PMID 22749881 DOI: 10.1016/j.bbamcr.2012.06.026  0.6
2012 Czöndör K, Mondin M, Garcia M, Heine M, Frischknecht R, Choquet D, Sibarita JB, Thoumine OR. Unified quantitative model of AMPA receptor trafficking at synapses. Proceedings of the National Academy of Sciences of the United States of America. 109: 3522-7. PMID 22331885 DOI: 10.1073/pnas.1109818109  0.6
2012 Izeddin I, Boulanger J, Racine V, Specht CG, Kechkar A, Nair D, Triller A, Choquet D, Dahan M, Sibarita JB. Wavelet analysis for single molecule localization microscopy. Optics Express. 20: 2081-95. PMID 22330449 DOI: 10.1364/OE.20.002081  0.6
2012 Levet F, Cassany A, Kann M, Sibarita JB. Automatic non-parametric capsid segmentation using wavelets transform and graph Proceedings - International Symposium On Biomedical Imaging. 1369-1372. DOI: 10.1109/ISBI.2012.6235822  0.6
2010 Brachet A, Leterrier C, Irondelle M, Fache MP, Racine V, Sibarita JB, Choquet D, Dargent B. Ankyrin G restricts ion channel diffusion at the axonal initial segment before the establishment of the diffusion barrier. The Journal of Cell Biology. 191: 383-95. PMID 20956383 DOI: 10.1083/jcb.201003042  0.6
2010 Carlton PM, Boulanger J, Kervrann C, Sibarita JB, Salamero J, Gordon-Messer S, Bressan D, Haber JE, Haase S, Shao L, Winoto L, Matsuda A, Kner P, Uzawa S, Gustafsson M, et al. Fast live simultaneous multiwavelength four-dimensional optical microscopy. Proceedings of the National Academy of Sciences of the United States of America. 107: 16016-22. PMID 20705899 DOI: 10.1073/pnas.1004037107  0.6
2010 Boulanger J, Kervrann C, Bouthemy P, Elbau P, Sibarita JB, Salamero J. Patch-based nonlocal functional for denoising fluorescence microscopy image sequences. Ieee Transactions On Medical Imaging. 29: 442-54. PMID 19900849 DOI: 10.1109/TMI.2009.2033991  0.6
2009 Delevoye C, Hurbain I, Tenza D, Sibarita JB, Uzan-Gafsou S, Ohno H, Geerts WJ, Verkleij AJ, Salamero J, Marks MS, Raposo G. AP-1 and KIF13A coordinate endosomal sorting and positioning during melanosome biogenesis. The Journal of Cell Biology. 187: 247-64. PMID 19841138 DOI: 10.1083/jcb.200907122  0.6
2009 Bannai H, Lévi S, Schweizer C, Inoue T, Launey T, Racine V, Sibarita JB, Mikoshiba K, Triller A. Activity-dependent tuning of inhibitory neurotransmission based on GABAAR diffusion dynamics. Neuron. 62: 670-82. PMID 19524526 DOI: 10.1016/j.neuron.2009.04.023  0.6
2009 Montagnac G, Sibarita JB, Loubéry S, Daviet L, Romao M, Raposo G, Chavrier P. ARF6 Interacts with JIP4 to control a motor switch mechanism regulating endosome traffic in cytokinesis. Current Biology : Cb. 19: 184-95. PMID 19211056 DOI: 10.1016/j.cub.2008.12.043  0.6
2009 Dimitrov A, Paupe V, Gueudry C, Sibarita JB, Raposo G, Vielemeyer O, Gilbert T, Csaba Z, Attie-Bitach T, Cormier-Daire V, Gressens P, Rustin P, Perez F, El Ghouzzi V. The gene responsible for Dyggve-Melchior-Clausen syndrome encodes a novel peripheral membrane protein dynamically associated with the Golgi apparatus. Human Molecular Genetics. 18: 440-53. PMID 18996921 DOI: 10.1093/hmg/ddn371  0.6
2008 Sakurai-Yageta M, Recchi C, Le Dez G, Sibarita JB, Daviet L, Camonis J, D'Souza-Schorey C, Chavrier P. The interaction of IQGAP1 with the exocyst complex is required for tumor cell invasion downstream of Cdc42 and RhoA. The Journal of Cell Biology. 181: 985-98. PMID 18541705 DOI: 10.1083/jcb.200709076  0.6
2008 Romao M, Tanaka K, Sibarita JB, Ly-Hartig NT, Tanaka TU, Antony C. Three-dimensional electron microscopy analysis of ndc10-1 mutant reveals an aberrant organization of the mitotic spindle and spindle pole body defects in Saccharomyces cerevisiae. Journal of Structural Biology. 163: 18-28. PMID 18515145 DOI: 10.1016/j.jsb.2008.03.015  0.6
2008 De Mey JR, Kessler P, Dompierre J, Cordelières FP, Dieterlen A, Vonesch JL, Sibarita JB. Fast 4D Microscopy. Methods in Cell Biology. 85: 83-112. PMID 18155460 DOI: 10.1016/S0091-679X(08)85005-4  0.6
2008 Moutsimilli L, Farley S, El Khoury MA, Chamot C, Sibarita JB, Racine V, El Mestikawy S, Mathieu F, Dumas S, Giros B, Tzavara ET. Antipsychotics increase vesicular glutamate transporter 2 (VGLUT2) expression in thalamolimbic pathways. Neuropharmacology. 54: 497-508. PMID 18155072 DOI: 10.1016/j.neuropharm.2007.10.022  0.6
2008 Boulanger J, Sibarita JB, Kervrann C, Bouthemy P. Non-parametric regression for patch-based fluorescence microscopy image sequence denoising 2008 5th Ieee International Symposium On Biomedical Imaging: From Nano to Macro, Proceedings, Isbi. 748-751. DOI: 10.1109/ISBI.2008.4541104  0.6
2007 Groc L, Lafourcade M, Heine M, Renner M, Racine V, Sibarita JB, Lounis B, Choquet D, Cognet L. Surface trafficking of neurotransmitter receptor: comparison between single-molecule/quantum dot strategies. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 27: 12433-7. PMID 18003820 DOI: 10.1523/JNEUROSCI.3349-07.2007  0.6
2007 Desnos C, Huet S, Fanget I, Chapuis C, Böttiger C, Racine V, Sibarita JB, Henry JP, Darchen F. Myosin va mediates docking of secretory granules at the plasma membrane. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 27: 10636-45. PMID 17898234 DOI: 10.1523/JNEUROSCI.1228-07.2007  0.6
2007 Vascotto F, Lankar D, Faure-André G, Vargas P, Diaz J, Le Roux D, Yuseff MI, Sibarita JB, Boes M, Raposo G, Mougneau E, Glaichenhaus N, Bonnerot C, Manoury B, Lennon-Duménil AM. The actin-based motor protein myosin II regulates MHC class II trafficking and BCR-driven antigen presentation. The Journal of Cell Biology. 176: 1007-19. PMID 17389233 DOI: 10.1083/jcb.200611147  0.6
2007 Racine V, Sachse M, Salamero J, Fraisier V, Trubuil A, Sibarita JB. Visualization and quantification of vesicle trafficking on a three-dimensional cytoskeleton network in living cells. Journal of Microscopy. 225: 214-28. PMID 17371444 DOI: 10.1111/j.1365-2818.2007.01723.x  0.6
2007 Zuccolo M, Alves A, Galy V, Bolhy S, Formstecher E, Racine V, Sibarita JB, Fukagawa T, Shiekhattar R, Yen T, Doye V. The human Nup107-160 nuclear pore subcomplex contributes to proper kinetochore functions. The Embo Journal. 26: 1853-64. PMID 17363900 DOI: 10.1038/sj.emboj.7601642  0.6
2006 Théry M, Racine V, Piel M, Pépin A, Dimitrov A, Chen Y, Sibarita JB, Bornens M. Anisotropy of cell adhesive microenvironment governs cell internal organization and orientation of polarity. Proceedings of the National Academy of Sciences of the United States of America. 103: 19771-6. PMID 17179050 DOI: 10.1073/pnas.0609267103  0.6
2006 Celton-Morizur S, Racine V, Sibarita JB, Paoletti A. Pom1 kinase links division plane position to cell polarity by regulating Mid1p cortical distribution. Journal of Cell Science. 119: 4710-8. PMID 17077120 DOI: 10.1242/jcs.03261  0.6
2006 Miserey-Lenkei S, Couëdel-Courteille A, Del Nery E, Bardin S, Piel M, Racine V, Sibarita JB, Perez F, Bornens M, Goud B. A role for the Rab6A' GTPase in the inactivation of the Mad2-spindle checkpoint. The Embo Journal. 25: 278-89. PMID 16395330 DOI: 10.1038/sj.emboj.7600929  0.6
2006 Sibarita JB, Racine V, Salamero J. Quantification of membrane trafficking on a 3D cytoskeleton network in living cells 2006 3rd Ieee International Symposium On Biomedical Imaging: From Nano to Macro - Proceedings. 2006: 263-266.  0.6
2006 Racine V, Hertzog A, Jouanneau J, Salamero J, Kervrann C, Sibarita JB. Multiple-target tracking of 3D fluorescent objects based on simulated annealing 2006 3rd Ieee International Symposium On Biomedical Imaging: From Nano to Macro - Proceedings. 2006: 1020-1023.  0.6
2005 Langevin J, Morgan MJ, Sibarita JB, Aresta S, Murthy M, Schwarz T, Camonis J, Bellaïche Y. Drosophila exocyst components Sec5, Sec6, and Sec15 regulate DE-Cadherin trafficking from recycling endosomes to the plasma membrane. Developmental Cell. 9: 365-76. PMID 16224820 DOI: 10.1016/j.devcel.2005.07.013  0.6
2005 Théry M, Racine V, Pépin A, Piel M, Chen Y, Sibarita JB, Bornens M. The extracellular matrix guides the orientation of the cell division axis. Nature Cell Biology. 7: 947-53. PMID 16179950 DOI: 10.1038/ncb1307  0.6
2005 Sibarita JB. Deconvolution microscopy. Advances in Biochemical Engineering/Biotechnology. 95: 201-43. PMID 16080270 DOI: 10.1007/b102215  0.6
2005 Angénieux C, Fraisier V, Maître B, Racine V, van der Wel N, Fricker D, Proamer F, Sachse M, Cazenave JP, Peters P, Goud B, Hanau D, Sibarita JB, Salamero J, de la Salle H. The cellular pathway of CD1e in immature and maturing dendritic cells. Traffic (Copenhagen, Denmark). 6: 286-302. PMID 15752135 DOI: 10.1111/j.1600-0854.2005.00272.x  0.6
2004 Braun V, Fraisier V, Raposo G, Hurbain I, Sibarita JB, Chavrier P, Galli T, Niedergang F. TI-VAMP/VAMP7 is required for optimal phagocytosis of opsonised particles in macrophages. The Embo Journal. 23: 4166-76. PMID 15470500 DOI: 10.1038/sj.emboj.7600427  0.6
2004 Loïodice I, Alves A, Rabut G, Van Overbeek M, Ellenberg J, Sibarita JB, Doye V. The entire Nup107-160 complex, including three new members, is targeted as one entity to kinetochores in mitosis. Molecular Biology of the Cell. 15: 3333-44. PMID 15146057 DOI: 10.1091/mbc.E03-12-0878  0.6
2002 Abal M, Piel M, Bouckson-Castaing V, Mogensen M, Sibarita JB, Bornens M. Microtubule release from the centrosome in migrating cells. The Journal of Cell Biology. 159: 731-7. PMID 12473683 DOI: 10.1083/jcb.200207076  0.6
2002 Sibarita JB, Magnin H, De Mey JR. Ultra-fast 4D microscopy and high throughput distributed deconvolution Proceedings - International Symposium On Biomedical Imaging. 2002: 769-772. DOI: 10.1109/ISBI.2002.1029371  0.6
2001 Savino TM, Gébrane-Younès J, De Mey J, Sibarita JB, Hernandez-Verdun D. Nucleolar assembly of the rRNA processing machinery in living cells. The Journal of Cell Biology. 153: 1097-110. PMID 11381093 DOI: 10.1083/jcb.153.5.1097  0.6
1999 Taddei A, Roche D, Sibarita JB, Turner BM, Almouzni G. Duplication and maintenance of heterochromatin domains. The Journal of Cell Biology. 147: 1153-66. PMID 10601331 DOI: 10.1083/jcb.147.6.1153  0.6
1999 Bonneton C, Sibarita JB, Thiery JP. Relationship between cell migration and cell cycle during the initiation of epithelial to fibroblastoid transition. Cell Motility and the Cytoskeleton. 43: 288-95. PMID 10423270 DOI: 10.1002/(SICI)1097-0169(1999)43:4<288::AID-CM2>3.0.CO;2-Y  0.6
1998 Lehr J, Sibarita JB, Chassery JM. Image restoration in X-ray microscopy: PSF determination and biological applications. Ieee Transactions On Image Processing : a Publication of the Ieee Signal Processing Society. 7: 258-63. PMID 18267403 DOI: 10.1109/83.661006  0.6
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