Alexander Mathis - Publications

Harvard University, Cambridge, MA, United States 

13/63 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Mathis A, Schneider S, Lauer J, Mathis MW. A Primer on Motion Capture with Deep Learning: Principles, Pitfalls, and Perspectives. Neuron. 108: 44-65. PMID 33058765 DOI: 10.1016/j.neuron.2020.09.017  1
2019 Mathis MW, Mathis A. Deep learning tools for the measurement of animal behavior in neuroscience. Current Opinion in Neurobiology. 60: 1-11. PMID 31791006 DOI: 10.1016/j.conb.2019.10.008  1
2019 Nath T, Mathis A, Chen AC, Patel A, Bethge M, Mathis MW. Using DeepLabCut for 3D markerless pose estimation across species and behaviors. Nature Protocols. PMID 31227823 DOI: 10.1038/s41596-019-0176-0  1
2018 Mathis A, Mamidanna P, Cury KM, Abe T, Murthy VN, Mathis MW, Bethge M. DeepLabCut: markerless pose estimation of user-defined body parts with deep learning. Nature Neuroscience. PMID 30127430 DOI: 10.1038/s41593-018-0209-y  1
2017 Li Y, Mathis A, Grewe BF, Osterhout JA, Ahanonu B, Schnitzer MJ, Murthy VN, Dulac C. Neuronal Representation of Social Information in the Medial Amygdala of Awake Behaving Mice. Cell. PMID 29107332 DOI: 10.1016/j.cell.2017.10.015  1
2017 Herz AV, Mathis A, Stemmler M. Periodic population codes: From a single circular variable to higher dimensions, multiple nested scales, and conceptual spaces. Current Opinion in Neurobiology. 46: 99-108. PMID 28888183 DOI: 10.1016/j.conb.2017.07.005  1
2017 Mathis MW, Mathis A, Uchida N. Somatosensory Cortex Plays an Essential Role in Forelimb Motor Adaptation in Mice. Neuron. 93: 1493-1503.e6. PMID 28334611 DOI: 10.1016/j.neuron.2017.02.049  1
2016 Mathis A, Rokni D, Kapoor V, Bethge M, Murthy VN. Reading Out Olfactory Receptors: Feedforward Circuits Detect Odors in Mixtures without Demixing. Neuron. 91: 1110-23. PMID 27593177 DOI: 10.1016/j.neuron.2016.08.007  0.96
2015 Stemmler M, Mathis A, Herz AV. Connecting multiple spatial scales to decode the population activity of grid cells. Science Advances. 1: e1500816. PMID 26824061 DOI: 10.1126/science.1500816  1
2015 Mathis A, Stemmler MB, Herz AV. Probable nature of higher-dimensional symmetries underlying mammalian grid-cell activity patterns. Elife. 4. PMID 25910055 DOI: 10.7554/eLife.05979  1
2013 Mathis A, Herz AV, Stemmler MB. Multiscale codes in the nervous system: the problem of noise correlations and the ambiguity of periodic scales. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 88: 022713. PMID 24032870 DOI: 10.1103/PhysRevE.88.022713  1
2012 Mathis A, Herz AV, Stemmler MB. Resolution of nested neuronal representations can be exponential in the number of neurons. Physical Review Letters. 109: 018103. PMID 23031134 DOI: 10.1103/PhysRevLett.109.018103  1
2012 Mathis A, Herz AV, Stemmler M. Optimal population codes for space: grid cells outperform place cells. Neural Computation. 24: 2280-317. PMID 22594833 DOI: 10.1162/NECO_a_00319  1
Low-probability matches
2020 Verhulst NO, Brendle A, Blanckenhorn WU, Mathis A. Thermal preferences of subtropical Aedes aegypti and temperate Ae. japonicus mosquitoes. Journal of Thermal Biology. 91: 102637. PMID 32716879 DOI: 10.1016/j.jtherbio.2020.102637  0.01
2020 Cuéllar AC, Kjær LJ, Baum A, Stockmarr A, Skovgard H, Nielsen SA, Andersson MG, Lindström A, Chirico J, Lühken R, Steinke S, Kiel E, Gethmann J, Conraths FJ, Larska M, ... ... Mathis A, et al. Modelling the monthly abundance of Culicoides biting midges in nine European countries using Random Forests machine learning. Parasites & Vectors. 13: 194. PMID 32295627 DOI: 10.1186/s13071-020-04053-x  0.01
2019 Cafarelli C, Russo G, Mathis A, Silaghi C. De novo genome sequencing and comparative stage-specific transcriptomic analysis of Dirofilaria repens. International Journal For Parasitology. PMID 31557466 DOI: 10.1016/j.ijpara.2019.04.008  0.01
2019 Mathis A, Pack AR, Maeda RS, McDougle SD. Highlights from the 29th Annual Meeting of the Society for the Neural Control of Movement. Journal of Neurophysiology. PMID 31461364 DOI: 10.1152/jn.00484.2019  0.01
2019 Vasić A, Oșlobanu LE, Marinov M, Crivei LA, Rățoi IA, Aniță A, Aniță D, Doroșencu A, Alexe V, Răileanu Ș, Simeunović P, Raileanu C, Falcuța E, Prioteasa FL, Bojkovski J, ... ... Mathis A, et al. Evidence of West Nile Virus (WNV) Circulation in Wild Birds and WNV RNA Negativity in Mosquitoes of the Danube Delta Biosphere Reserve, Romania, 2016. Tropical Medicine and Infectious Disease. 4. PMID 31438608 DOI: 10.3390/tropicalmed4030116  0.01
2019 Vasić A, Zdravković N, Aniță D, Bojkovski J, Marinov M, Mathis A, Niculaua M, Oșlobanu EL, Pavlović I, Petrić D, Pflüger V, Pudar D, Savuţa G, Simeunović P, Veronesi E, et al. Species diversity, host preference and arbovirus detection of Culicoides (Diptera: Ceratopogonidae) in south-eastern Serbia. Parasites & Vectors. 12: 61. PMID 30683145 DOI: 10.1186/s13071-019-3292-3  0.01
2018 Cuéllar AC, Jung Kjær L, Baum A, Stockmarr A, Skovgard H, Nielsen SA, Andersson MG, Lindström A, Chirico J, Lühken R, Steinke S, Kiel E, Gethmann J, Conraths FJ, Larska M, ... ... Mathis A, et al. Monthly variation in the probability of presence of adult Culicoides populations in nine European countries and the implications for targeted surveillance. Parasites & Vectors. 11: 608. PMID 30497537 DOI: 10.1186/s13071-018-3182-0  0.01
2018 Paslaru AI, Mathis A, Torgerson P, Veronesi E. Vector competence of pre-alpine Culicoides (Diptera: Ceratopogonidae) for bluetongue virus serotypes 1, 4 and 8. Parasites & Vectors. 11: 466. PMID 30103803 DOI: 10.1186/s13071-018-3050-y  0.01
2018 Veronesi E, Paslaru A, Silaghi C, Tobler K, Glavinic U, Torgerson P, Mathis A. Experimental evaluation of infection, dissemination, and transmission rates for two West Nile virus strains in European Aedes japonicus under a fluctuating temperature regime. Parasitology Research. PMID 29705877 DOI: 10.1007/s00436-018-5886-7  0.01
2018 Schnyder M, Hertzberg H, Mathis A, Schönmann M, Hehl A, Deplazes P. Veterinary parasitology teaching - Ten years of experience with the Vetsuisse curriculum. Veterinary Parasitology. 252: 148-152. PMID 29559138 DOI: 10.1016/j.vetpar.2018.01.033  0.01
2018 Cuéllar AC, Kjær LJ, Kirkeby C, Skovgard H, Nielsen SA, Stockmarr A, Andersson G, Lindstrom A, Chirico J, Lühken R, Steinke S, Kiel E, Gethmann J, Conraths FJ, Larska M, ... ... Mathis A, et al. Spatial and temporal variation in the abundance of Culicoides biting midges (Diptera: Ceratopogonidae) in nine European countries. Parasites & Vectors. 11: 112. PMID 29482593 DOI: 10.1186/s13071-018-2706-y  0.01
2017 Mikaeili F, Mathis A, Deplazes P, Mirhendi H, Barazesh A, Ebrahimi S, Kia EB. Differentiation of Toxocara canis and Toxocara cati based on PCR-RFLP analyses of rDNA-ITS and mitochondrial cox1 and nad1 regions. Acta Parasitologica. 62: 549-556. PMID 28682773 DOI: 10.1515/ap-2017-0066  0.01
2017 Silaghi C, Beck R, Capelli G, Montarsi F, Mathis A. Development of Dirofilaria immitis and Dirofilaria repens in Aedes japonicus and Aedes geniculatus. Parasites & Vectors. 10: 94. PMID 28219407 DOI: 10.1186/s13071-017-2015-x  0.01
2016 Bosch F, Manzanell R, Mathis A. First description of Onchocerca jakutensis (Nematoda: Filarioidea) in red deer (Cervus elaphus) in Switzerland. International Journal For Parasitology. Parasites and Wildlife. 5: 192-7. PMID 27617204 DOI: 10.1016/j.ijppaw.2016.06.001  0.01
2016 Tuten HC, Moosmann P, Mathis A, Schaffner F. Effects of Pyriproxifen on Aedes japonicus Development and Its Auto-Dissemination by Gravid Females in Laboratory Trials. Journal of the American Mosquito Control Association. 32: 55-8. PMID 27105217 DOI: 10.2987/moco-32-01-55-58.1  0.01
2015 Mathis A, Depaquit J, Dvořák V, Tuten H, Bañuls AL, Halada P, Zapata S, Lehrter V, Hlavačková K, Prudhomme J, Volf P, Sereno D, Kaufmann C, Pflüger V, Schaffner F. Identification of phlebotomine sand flies using one MALDI-TOF MS reference database and two mass spectrometer systems. Parasites & Vectors. 8: 266. PMID 25957576 DOI: 10.1186/s13071-015-0878-2  0.01
2015 Eichenberger RM, Deplazes P, Mathis A. Ticks on dogs and cats: a pet owner-based survey in a rural town in northeastern Switzerland. Ticks and Tick-Borne Diseases. 6: 267-71. PMID 25684694 DOI: 10.1016/j.ttbdis.2015.01.007  0.01
2015 Fankhauser B, Dumont P, Hunter JS, McCall JW, Kaufmann C, Mathis A, Young DR, Carroll SP, McCall S, Chester ST, Soll MD. Repellent and insecticidal efficacy of a new combination of fipronil and permethrin against three mosquito species (Aedes albopictus, Aedes aegypti and Culex pipiens) on dogs. Parasites & Vectors. 8: 64. PMID 25633963 DOI: 10.1186/s13071-015-0691-y  0.01
2014 Schaffner F, Fontenille D, Mathis A. Autochthonous dengue emphasises the threat of arbovirosis in Europe. The Lancet. Infectious Diseases. 14: 1044. PMID 25218097 DOI: 10.1016/S1473-3099(14)70925-9  0.01
2014 Schaffner F, Mathis A. Dengue and dengue vectors in the WHO European region: past, present, and scenarios for the future. The Lancet. Infectious Diseases. 14: 1271-80. PMID 25172160 DOI: 10.1016/S1473-3099(14)70834-5  0.01
2014 Michel AO, Mathis A, Ryser-Degiorgis MP. Babesia spp. in European wild ruminant species: parasite diversity and risk factors for infection. Veterinary Research. 45: 65. PMID 24925474 DOI: 10.1186/1297-9716-45-65  0.01
2014 Schaffner F, Kaufmann C, Pflüger V, Mathis A. Rapid protein profiling facilitates surveillance of invasive mosquito species. Parasites & Vectors. 7: 142. PMID 24685094 DOI: 10.1186/1756-3305-7-142  0.01
2013 Guardone L, Deplazes P, Macchioni F, Magi M, Mathis A. Ribosomal and mitochondrial DNA analysis of Trichuridae nematodes of carnivores and small mammals. Veterinary Parasitology. 197: 364-9. PMID 23920054 DOI: 10.1016/j.vetpar.2013.06.022  0.01
2012 Kaufmann C, Steinmann IC, Hegglin D, Schaffner F, Mathis A. Spatio-temporal occurrence of Culicoides biting midges in the climatic regions of Switzerland, along with large scale species identification by MALDI-TOF mass spectrometry. Parasites & Vectors. 5: 246. PMID 23111100 DOI: 10.1186/1756-3305-5-246  0.01
2012 Kaufmann C, Schaffner F, Ziegler D, Pflüger V, Mathis A. Identification of field-caught Culicoides biting midges using matrix-assisted laser desorption/ionization time of flight mass spectrometry. Parasitology. 139: 248-58. PMID 22008297 DOI: 10.1017/S0031182011001764  0.01
2012 Bružinskaitė-Schmidhalter R, Šarkūnas M, Malakauskas A, Mathis A, Torgerson PR, Deplazes P. Helminths of red foxes (Vulpes vulpes) and raccoon dogs (Nyctereutes procyonoides) in Lithuania. Parasitology. 139: 120-7. PMID 21996514 DOI: 10.1017/S0031182011001715  0.01
2011 Sherifi K, Rexhepi A, Hamidi A, Behluli B, Zessin KH, Mathis A, Deplazes P. Detection of patent infections of Echinococcus granulosus ("sheep-strain", G1) in naturally infected dogs in Kosovo. Berliner Und MüNchener TieräRztliche Wochenschrift. 124: 518-21. PMID 22191174  0.01
2011 Kammerer A, Mathis A, Stemmler M, Herz A, Leibold C. A physiologically inspired model for global remapping in the hippocampus Bmc Neuroscience. 12. DOI: 10.1186/1471-2202-12-S1-P194  0.01
2010 Mathis A, Stemmler M, Herz A. How good is grid coding versus place coding for navigation using noisy, spiking neurons? Bmc Neuroscience. 11. DOI: 10.1186/1471-2202-11-S1-O20  0.01
2009 Hoby S, Mathis A, Doherr MG, Robert N, Ryser-Degiorgis MP. Babesia capreoli infections in alpine chamois (Rupicapra r. Rupicapra), roe deer (Capreolus c. Capreolus) and red deer (Cervus elaphus) from Switzerland. Journal of Wildlife Diseases. 45: 748-53. PMID 19617485 DOI: 10.7589/0090-3558-45.3.748  0.01
2009 Hasler S, Dedes W, Mathis A, Grimm F, Thiel MA. MoisturePlus contact lens solution as a source of acanthamoeba keratitis. Cornea. 28: 219-20. PMID 19158570 DOI: 10.1097/ICO.0b013e318183a34b  0.01
2009 Davidson RK, Oines O, Madslien K, Mathis A. Echinococcus multilocularis--adaptation of a worm egg isolation procedure coupled with a multiplex PCR assay to carry out large-scale screening of red foxes (Vulpes vulpes) in Norway. Parasitology Research. 104: 509-14. PMID 18923842 DOI: 10.1007/s00436-008-1222-y  0.01
2008 Schmid N, Deplazes P, Hoby S, Ryser-Degiorgis MP, Edelhofer R, Mathis A. Babesia divergens-like organisms from free-ranging chamois (Rupicapra r. rupicapra) and roe deer (Capreolus c. capreolus) are distinct from B. divergens of cattle origin - an epidemiological and molecular genetic investigation. Veterinary Parasitology. 154: 14-20. PMID 18400402 DOI: 10.1016/j.vetpar.2008.02.028  0.01
2007 Mathis A. Development of a three-dimensional enteric cell culture model for in vitro studies of the intestinal eukaryotic parasites Cryptosporidium spp. Altex. 24: 92-3. PMID 19835075  0.01
2007 Bruzinskaite R, Marcinkute A, Strupas K, Sokolovas V, Deplazes P, Mathis A, Eddi C, Sarkūnas M. Alveolar echinococcosis, Lithuania. Emerging Infectious Diseases. 13: 1618-9. PMID 18258025 DOI: 10.3201/eid1310.061161  0.01
2007 Hoby S, Robert N, Mathis A, Schmid N, Meli ML, Hofmann-Lehmann R, Lutz H, Deplazes P, Ryser-Degiorgis MP. Babesiosis in free-ranging chamois (Rupicapra r. rupicapra) from Switzerland. Veterinary Parasitology. 148: 341-5. PMID 17689015 DOI: 10.1016/j.vetpar.2007.06.035  0.01
2006 Mathis A, Deplazes P. Copro-DNA tests for diagnosis of animal taeniid cestodes. Parasitology International. 55: S87-90. PMID 16325459 DOI: 10.1016/j.parint.2005.11.012  0.01
2005 Mathis A, Wild P, Boettger EC, Kapel CM, Deplazes P. Mitochondrial ribosome as the target for the macrolide antibiotic clarithromycin in the helminth Echinococcus multilocularis. Antimicrobial Agents and Chemotherapy. 49: 3251-5. PMID 16048933 DOI: 10.1128/AAC.49.8.3251-3255.2005  0.01
2005 Mathis A, Weber R, Deplazes P. Zoonotic potential of the microsporidia. Clinical Microbiology Reviews. 18: 423-45. PMID 16020683 DOI: 10.1128/CMR.18.3.423-445.2005  0.01
2004 Georges S, Villard O, Filisetti D, Mathis A, Marcellin L, Hansmann Y, Candolfi E. Usefulness of PCR analysis for diagnosis of alveolar echinococcosis with unusual localizations: two case studies. Journal of Clinical Microbiology. 42: 5954-6. PMID 15583352 DOI: 10.1128/JCM.42.12.5954-5956.2004  0.01
2004 Mathis A, Wild P, Deplazes P, Boettger EC. The mitochondrial ribosome of the protozoan Acanthamoeba castellanii is the target for macrolide antibiotics. Molecular and Biochemical Parasitology. 135: 225-9. PMID 15110464 DOI: 10.1016/j.molbiopara.2004.02.004  0.01
2004 Glaeser C, Grimm F, Mathis A, Weber R, Nadal D, Deplazes P. Detection and molecular characterization of Cryptosporidium spp. isolated from diarrheic children in Switzerland. The Pediatric Infectious Disease Journal. 23: 359-61. PMID 15071295  0.01
2004 Stefanić S, Shaikenov BS, Deplazes P, Dinkel A, Torgerson PR, Mathis A. Polymerase chain reaction for detection of patent infections of Echinococcus granulosus ("sheep strain") in naturally infected dogs. Parasitology Research. 92: 347-51. PMID 14727186 DOI: 10.1007/s00436-003-1043-y  0.01
2002 Müller-Doblies UU, Herzog K, Tanner I, Mathis A, Deplazes P. First isolation and characterisation of Encephalitozoon cuniculi from a free-ranging rat (Rattus norvegicus). Veterinary Parasitology. 107: 279-85. PMID 12163239  0.01
2013 Engler O, Savini G, Papa A, Figuerola J, Groschup MH, Kampen H, Medlock J, Vaux A, Wilson AJ, Werner D, Jöst H, Goffredo M, Capelli G, Federici V, Tonolla M, ... ... Mathis A, et al. European surveillance for West Nile virus in mosquito populations. International Journal of Environmental Research and Public Health. 10: 4869-95. PMID 24157510 DOI: 10.3390/ijerph10104869  0.01
2012 Schaffner F, Thiéry I, Kaufmann C, Zettor A, Lengeler C, Mathis A, Bourgouin C. Anopheles plumbeus (Diptera: Culicidae) in Europe: a mere nuisance mosquito or potential malaria vector? Malaria Journal. 11: 393. PMID 23181931 DOI: 10.1186/1475-2875-11-393  0.01
2012 Wenk CE, Kaufmann C, Schaffner F, Mathis A. Molecular characterization of Swiss Ceratopogonidae (Diptera) and evaluation of real-time PCR assays for the identification of Culicoides biting midges. Veterinary Parasitology. 184: 258-66. PMID 21963364 DOI: 10.1016/j.vetpar.2011.08.034  0.01
2011 Capelli G, Drago A, Martini S, Montarsi F, Soppelsa M, Delai N, Ravagnan S, Mazzon L, Schaffner F, Mathis A, Di Luca M, Romi R, Russo F. First report in Italy of the exotic mosquito species Aedes (Finlaya) koreicus, a potential vector of arboviruses and filariae. Parasites & Vectors. 4: 188. PMID 21951867 DOI: 10.1186/1756-3305-4-188  0.01
2010 Magnis J, Naucke TJ, Mathis A, Deplazes P, Schnyder M. Local transmission of the eye worm Thelazia callipaeda in southern Germany. Parasitology Research. 106: 715-7. PMID 19937259 DOI: 10.1007/s00436-009-1678-4  0.01
2006 Hilpertshauser H, Deplazes P, Schnyder M, Gern L, Mathis A. Babesia spp. identified by PCR in ticks collected from domestic and wild ruminants in southern Switzerland. Applied and Environmental Microbiology. 72: 6503-7. PMID 17021198 DOI: 10.1128/AEM.00823-06  0.01
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