David M. Chipman - Publications

Affiliations: 
1971-2016 Life Sciences Ben Gurion University of the Negev 
Area:
Branched chain amino acid synthesis, biophysics

64 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2012 Nemeria N, Binshtein E, Patel H, Balakrishnan A, Vered I, Shaanan B, Barak Z, Chipman D, Jordan F. Glyoxylate carboligase: a unique thiamin diphosphate-dependent enzyme that can cycle between the 4'-aminopyrimidinium and 1',4'-iminopyrimidine tautomeric forms in the absence of the conserved glutamate. Biochemistry. 51: 7940-52. PMID 22970650 DOI: 10.1021/Bi300893V  0.456
2012 Belenky I, Steinmetz A, Vyazmensky M, Barak Z, Tittmann K, Chipman DM. Many of the functional differences between acetohydroxyacid synthase (AHAS) isozyme I and other AHASs are a result of the rapid formation and breakdown of the covalent acetolactate-thiamin diphosphate adduct in AHAS I. The Febs Journal. 279: 1967-79. PMID 22443469 DOI: 10.1111/J.1742-4658.2012.08577.X  0.495
2012 Barak Z, Chipman DM. Allosteric regulation in Acetohydroxyacid Synthases (AHASs)--different structures and kinetic behavior in isozymes in the same organisms. Archives of Biochemistry and Biophysics. 519: 167-74. PMID 22198286 DOI: 10.1016/J.Abb.2011.11.025  0.434
2011 Vyazmensky M, Steinmetz A, Meyer D, Golbik R, Barak Z, Tittmann K, Chipman DM. Significant catalytic roles for Glu47 and Gln 110 in all four of the C-C bond-making and -breaking steps of the reactions of acetohydroxyacid synthase II. Biochemistry. 50: 3250-60. PMID 21370850 DOI: 10.1021/Bi102051H  0.479
2011 Slutzker A, Vyazmensky M, Chipman DM, Barak Z. Role of the C-terminal domain of the regulatory subunit of AHAS isozyme III: use of random mutagenesis with in vivo reconstitution (REM-ivrs). Biochimica Et Biophysica Acta. 1814: 449-55. PMID 21224018 DOI: 10.1016/J.Bbapap.2011.01.002  0.358
2010 Steinmetz A, Vyazmensky M, Meyer D, Barak ZE, Golbik R, Chipman DM, Tittmann K. Valine 375 and phenylalanine 109 confer affinity and specificity for pyruvate as donor substrate in acetohydroxy acid synthase isozyme II from Escherichia coli. Biochemistry. 49: 5188-99. PMID 20504042 DOI: 10.1021/Bi100555Q  0.474
2009 Vyazmensky M, Zherdev Y, Slutzker A, Belenky I, Kryukov O, Barak Z, Chipman DM. Interactions between large and small subunits of different acetohydroxyacid synthase isozymes of Escherichia coli. Biochemistry. 48: 8731-7. PMID 19653643 DOI: 10.1021/Bi9009488  0.404
2009 Shaanan B, Chipman DM. Reaction mechanisms of thiamin diphosphate enzymes: new insights into the role of a conserved glutamate residue. The Febs Journal. 276: 2447-53. PMID 19476486 DOI: 10.1111/J.1742-4658.2009.06965.X  0.404
2009 Chipman DM, Barak Z, Shaanan B, Vyazmensky M, Binshtein E, Belenky I, Temam V, Steinmetz A, Golbik R, Tittmann K. Origin of the specificities of acetohydroxyacid synthases and glyoxylate carboligase Journal of Molecular Catalysis B: Enzymatic. 61: 50-55. DOI: 10.1016/J.Molcatb.2009.03.015  0.437
2008 Shulman A, Zalyapin E, Vyazmensky M, Yifrach O, Barak Z, Chipman DM. Allosteric regulation of Bacillus subtilis threonine deaminase, a biosynthetic threonine deaminase with a single regulatory domain. Biochemistry. 47: 11783-92. PMID 18855421 DOI: 10.1021/Bi800901N  0.39
2008 Kaplun A, Binshtein E, Vyazmensky M, Steinmetz A, Barak Z, Chipman DM, Tittmann K, Shaanan B. Glyoxylate carboligase lacks the canonical active site glutamate of thiamine-dependent enzymes. Nature Chemical Biology. 4: 113-8. PMID 18176558 DOI: 10.1038/Nchembio.62  0.439
2006 Kaplun A, Vyazmensky M, Zherdev Y, Belenky I, Slutzker A, Mendel S, Barak Z, Chipman DM, Shaanan B. Structure of the regulatory subunit of acetohydroxyacid synthase isozyme III from Escherichia coli. Journal of Molecular Biology. 357: 951-63. PMID 16458324 DOI: 10.1016/J.Jmb.2005.12.077  0.358
2006 Vinogradov V, Vyazmensky M, Engel S, Belenky I, Kaplun A, Kryukov O, Barak Z, Chipman DM. Acetohydroxyacid synthase isozyme I from Escherichia coli has unique catalytic and regulatory properties. Biochimica Et Biophysica Acta. 1760: 356-63. PMID 16326011 DOI: 10.1016/J.Bbagen.2005.10.008  0.475
2005 Chipman DM, Duggleby RG, Tittmann K. Mechanisms of acetohydroxyacid synthases. Current Opinion in Chemical Biology. 9: 475-81. PMID 16055369 DOI: 10.1016/J.Cbpa.2005.07.002  0.47
2005 Vinogradov M, Kaplun A, Vyazmensky M, Engel S, Golbik R, Tittmann K, Uhlemann K, Meshalkina L, Barak Z, Hübner G, Chipman DM. Monitoring the acetohydroxy acid synthase reaction and related carboligations by circular dichroism spectroscopy. Analytical Biochemistry. 342: 126-33. PMID 15958189 DOI: 10.1016/J.Ab.2005.03.049  0.385
2005 Engel S, Vyazmensky M, Berkovich D, Barak Z, Merchuk J, Chipman DM. Column flow reactor using acetohydroxyacid synthase I from Escherichia coli as catalyst in continuous synthesis of R-phenylacetyl carbinol. Biotechnology and Bioengineering. 89: 733-40. PMID 15685598 DOI: 10.1002/Bit.20392  0.317
2005 Tittmann K, Vyazmensky M, Hübner G, Barak Z, Chipman DM. The carboligation reaction of acetohydroxyacid synthase II: steady-state intermediate distributions in wild type and mutants by NMR. Proceedings of the National Academy of Sciences of the United States of America. 102: 553-8. PMID 15640355 DOI: 10.1073/Pnas.0408210101  0.456
2004 Engel S, Vyazmensky M, Berkovich D, Barak Z, Chipman DM. Substrate range of acetohydroxy acid synthase I from Escherichia coli in the stereoselective synthesis of alpha-hydroxy ketones. Biotechnology and Bioengineering. 88: 825-31. PMID 15558598 DOI: 10.1002/Bit.20275  0.424
2004 Tittmann K, Schröder K, Golbik R, McCourt J, Kaplun A, Duggleby RG, Barak Z, Chipman DM, Hübner G. Electron transfer in acetohydroxy acid synthase as a side reaction of catalysis. Implications for the reactivity and partitioning of the carbanion/enamine form of (alpha-hydroxyethyl)thiamin diphosphate in a "nonredox" flavoenzyme. Biochemistry. 43: 8652-61. PMID 15236573 DOI: 10.1021/Bi049897T  0.473
2004 Engel S, Vyazmensky M, Vinogradov M, Berkovich D, Bar-Ilan A, Qimron U, Rosiansky Y, Barak Z, Chipman DM. Role of a conserved arginine in the mechanism of acetohydroxyacid synthase: catalysis of condensation with a specific ketoacid substrate. The Journal of Biological Chemistry. 279: 24803-12. PMID 15044456 DOI: 10.1074/Jbc.M401667200  0.453
2004 Porat I, Vinogradov M, Vyazmensky M, Lu CD, Chipman DM, Abdelal AT, Barak Z. Cloning and characterization of acetohydroxyacid synthase from Bacillus stearothermophilus. Journal of Bacteriology. 186: 570-4. PMID 14702326 DOI: 10.1128/Jb.186.2.570-574.2004  0.386
2003 Engel S, Vyazmensky M, Geresh S, Barak Z, Chipman DM. Acetohydroxyacid synthase: a new enzyme for chiral synthesis of R-phenylacetylcarbinol. Biotechnology and Bioengineering. 83: 833-40. PMID 12889023 DOI: 10.1002/Bit.10728  0.371
2003 Tittmann K, Golbik R, Uhlemann K, Khailova L, Schneider G, Patel M, Jordan F, Chipman DM, Duggleby RG, Hübner G. NMR analysis of covalent intermediates in thiamin diphosphate enzymes. Biochemistry. 42: 7885-91. PMID 12834340 DOI: 10.1021/Bi034465O  0.458
2003 Zohar Y, Einav M, Chipman DM, Barak Z. Acetohydroxyacid synthase from Mycobacterium avium and its inhibition by sulfonylureas and imidazolinones. Biochimica Et Biophysica Acta. 1649: 97-105. PMID 12818195 DOI: 10.1016/S1570-9639(03)00160-2  0.366
2003 Mendel S, Vinogradov M, Vyazmensky M, Chipman DM, Barak Z. The N-terminal domain of the regulatory subunit is sufficient for complete activation of acetohydroxyacid synthase III from Escherichia coli. Journal of Molecular Biology. 325: 275-84. PMID 12488095 DOI: 10.1016/S0022-2836(02)01142-7  0.415
2002 Kaplun A, Chipman DM, Barak Z. Isoleucine starvation caused by sulfometuron methyl in Salmonella typhimurium measured by translational frameshifting. Microbiology (Reading, England). 148: 713-7. PMID 11882705 DOI: 10.1099/00221287-148-3-713  0.345
2001 Bar-Ilan A, Balan V, Tittmann K, Golbik R, Vyazmensky M, Hübner G, Barak Z, Chipman DM. Binding and activation of thiamin diphosphate in acetohydroxyacid synthase. Biochemistry. 40: 11946-54. PMID 11570896 DOI: 10.1021/Bi0104524  0.462
2001 Mendel S, Elkayam T, Sella C, Vinogradov V, Vyazmensky M, Chipman DM, Barak Z. Acetohydroxyacid synthase: a proposed structure for regulatory subunits supported by evidence from mutagenesis. Journal of Molecular Biology. 307: 465-77. PMID 11243831 DOI: 10.1006/Jmbi.2000.4413  0.421
2000 Vyazmensky M, Elkayam T, Chipman DM, Barak Z. Isolation of subunits of acetohydroxy acid synthase isozyme III and reconstitution of holoenzyme. Methods in Enzymology. 324: 95-103. PMID 10989421 DOI: 10.1016/S0076-6879(00)24222-5  0.346
2000 Epelbaum S, Chipman DM, Barak Z. Analysis of intracellular metabolites as tool for studying branched-chain amino acid biosynthesis and its inhibition in bacteria Methods in Enzymology. 324: 10-23. PMID 10989413 DOI: 10.1016/S0076-6879(00)24214-6  0.321
2000 Engel S, Barak Z, Chipman DM, Merchuk JC. Purification of acetohydroxy acid synthase by separation in an aqueous two-phase system. Journal of Chromatography. B, Biomedical Sciences and Applications. 743: 281-6. PMID 10942298 DOI: 10.1016/S0378-4347(00)00053-0  0.356
2000 Engel S, Vyazmensky M, Barak Z, Chipman DM, Merchuk JC. Determination of the dissociation constant of valine from acetohydroxy acid synthase by equilibrium partition in an aqueous two-phase system. Journal of Chromatography. B, Biomedical Sciences and Applications. 743: 225-9. PMID 10942289 DOI: 10.1016/S0378-4347(00)00050-5  0.327
2000 Vyazmensky M, Barak Z, Chipman DM, Eichler J. Characterization of acetohydroxy acid synthase activity in the archaeon Haloferax volcanii. Comparative Biochemistry and Physiology. Part B, Biochemistry & Molecular Biology. 125: 205-10. PMID 10817907 DOI: 10.1016/S0305-0491(99)00170-4  0.444
1998 Epelbaum S, LaRossa RA, VanDyk TK, Elkayam T, Chipman DM, Barak Z. Branched-chain amino acid biosynthesis in Salmonella typhimurium: A quantitative analysis Journal of Bacteriology. 180: 4056-4067. PMID 9696751 DOI: 10.1128/Jb.180.16.4056-4067.1998  0.435
1998 Chipman D, Barak Z, Schloss JV. Biosynthesis of 2-aceto-2-hydroxy acids: acetolactate synthases and acetohydroxyacid synthases. Biochimica Et Biophysica Acta. 1385: 401-19. PMID 9655946 DOI: 10.1016/S0167-4838(98)00083-1  0.465
1998 Peisach D, Chipman DM, Van Ophem PW, Manning JM, Ringe D. Crystallographic study of steps along the reaction pathway of D-amino acid aminotransferase. Biochemistry. 37: 4958-67. PMID 9538014 DOI: 10.1021/Bi972884D  0.394
1998 Peisach D, Chipman DM, Van Ophem PW, Manning JM, Ringe D. D-Cycloserine inactivation of D-amino acid aminotransferase leads to a stable noncovalent protein complex with an aromatic cycloserine-PLP derivative Journal of the American Chemical Society. 120: 2268-2274. DOI: 10.2210/Pdb2Daa/Pdb  0.341
1996 Ibdah M, Bar-Ilan A, Livnah O, Schloss JV, Barak Z, Chipman DM. Homology modeling of the structure of bacterial acetohydroxy acid synthase and examination of the active site by site-directed mutagenesis. Biochemistry. 35: 16282-91. PMID 8973202 DOI: 10.1021/Bi961588I  0.424
1996 Vyazmensky M, Sella C, Barak Z, Chipman DM. Isolation and characterization of subunits of acetohydroxy acid synthase isozyme III and reconstitution of the holoenzyme. Biochemistry. 35: 10339-46. PMID 8756689 DOI: 10.1021/Bi9605604  0.411
1996 Epelbaum S, Chipman DM, Barak Z. Metabolic effects of inhibitors of two enzymes of the branched-chain amino acid pathway in Salmonella typhimurium Journal of Bacteriology. 178: 1187-1196. PMID 8576056 DOI: 10.1128/Jb.178.4.1187-1196.1996  0.411
1993 Sella C, Weinstock O, Barak Z, Chipman DM. Subunit association in acetohydroxy acid synthase isozyme III. Journal of Bacteriology. 175: 5339-43. PMID 8366022 DOI: 10.1128/Jb.175.17.5339-5343.1993  0.449
1993 Landstein D, Arad S, Barak Z, Chipman D. Relationships among the herbicide and functional sites of acetohydroxy acid synthase from Chlorella emersonii Planta. 191. DOI: 10.1007/Bf00240889  0.371
1992 Weinstock O, Sella C, Chipman DM, Barak Z. Properties of subcloned subunits of bacterial acetohydroxy acid synthases. Journal of Bacteriology. 174: 5560-6. PMID 1512191 DOI: 10.1128/Jb.174.17.5560-5566.1992  0.432
1990 Landstein D, Chipman DM, Arad SM, Barak Z. Acetohydroxy Acid Synthase Activity in Chlorella emersonii under Auto- and Heterotrophic Growth Conditions. Plant Physiology. 94: 614-20. PMID 16667756 DOI: 10.1104/Pp.94.2.614  0.398
1990 Gollop N, Damri B, Chipman DM, Barak Z. Physiological implications of the substrate specificities of acetohydroxy acid synthases from varied organisms. Journal of Bacteriology. 172: 3444-9. PMID 2345154 DOI: 10.1128/Jb.172.6.3444-3449.1990  0.374
1990 Epelbaum S, Chipman DM, Barak Z. Determination of products of acetohydroxy acid synthase by the colorimetric method, revisited Analytical Biochemistry. 191: 96-99. PMID 2077946 DOI: 10.1016/0003-2697(90)90393-N  0.369
1989 Gollop N, Damri B, Barak Z, Chipman DM. Kinetics and mechanism of acetohydroxy acid synthase isozyme III from Escherichia coli. Biochemistry. 28: 6310-7. PMID 2675968 DOI: 10.1021/Bi00441A024  0.469
1989 Markus S, Priel Z, Chipman DM. Interaction of calcium and vanadate with fluorescein isothiocyanate labeled Ca2+-ATPase from sarcoplasmic reticulum: Kinetics and equilibria Biochemistry. 28: 793-799. PMID 2523730 DOI: 10.1021/Bi00428A057  0.336
1988 Chipman DM, Jencks WP. Specificity of the sarcoplasmic reticulum calcium ATPase at the hydrolysis step. Biochemistry. 27: 5707-12. PMID 2972313 DOI: 10.1021/Bi00415A047  0.392
1987 Gollop N, Barak Z, Chipman DM. A method for simultaneous determination of the two possible products of acetohydroxy acid synthase. Analytical Biochemistry. 160: 323-31. PMID 3578759 DOI: 10.1016/0003-2697(87)90054-6  0.39
1987 Barak Z, Chipman DM, Gollop N. Physiological implications of the specificity of acetohydroxy acid synthase isozymes of enteric bacteria. Journal of Bacteriology. 169: 3750-6. PMID 3301814 DOI: 10.1128/Jb.169.8.3750-3756.1987  0.406
1986 Markus S, Priel Z, Chipman DM. Simultaneous binding of calcium and vanadate to the Ca2+ -ATPase of sarcoplasmic reticulum Biochimica Et Biophysica Acta (Bba)/Protein Structure and Molecular. 874: 128-135. PMID 2945595 DOI: 10.1016/0167-4838(86)90109-3  0.373
1983 Gollop N, Chipman DM, Barak Z. Inhibition of acetohydroxy acid synthase by leucine. Biochimica Et Biophysica Acta. 748: 34-9. PMID 6351926 DOI: 10.1016/0167-4838(83)90024-9  0.324
1983 Chipman DM, Lev A. Modification of the conformational equilibria in the sodium and potassium dependent adenosinetriphosphatase with glutaraldehyde. Biochemistry. 22: 4450-9. PMID 6313040 DOI: 10.1021/Bi00288A016  0.402
1983 Chipman DM, Elhanany E, Berger R, Lev A. Alteration of Conformational Equilibria in Na,K-ATPase by Glutaraldehyde Treatment Current Topics in Membranes and Transport. 19: 471-476. DOI: 10.1016/S0070-2161(08)60597-3  0.331
1981 Odom TA, Chipman DM, Betts G, Bernhard SA. Transient and steady-state kinetic studies of sodium-potassium adenosine triphosphatase using β-(2-furyl)acryloyl phosphate as chromophoric substrate assay Biochemistry. 20: 480-486. PMID 6260131 DOI: 10.1021/Bi00506A006  0.457
1979 Shoshan V, Shavit N, Chipman DM. Kinetics of nucleotide binding to chloroplast coupling factor (CF1). Biochimica Et Biophysica Acta. 504: 108-22. PMID 152122 DOI: 10.1016/0005-2728(78)90010-5  0.36
1979 Banai M, Shavit N, Chipman DM. Specificity of nucleotide binding sites in isolated chloroplast coupling factor (CF1). Biochimica Et Biophysica Acta. 504: 100-7. PMID 152121 DOI: 10.1016/0005-2728(78)90009-9  0.32
1977 Schindler M, Assaf Y, Sharon N, Chipman DM. Mechanism of lysozyme catalysis: role of ground-state strain in subsite D in hen egg-white and human lysozymes. Biochemistry. 16: 423-31. PMID 13816 DOI: 10.1021/Bi00622A013  0.321
1974 Highsmith S, Chipman DM. Preparation of tritium-labeled hyaluronic acid oligomers and their use in enzyme studies Analytical Biochemistry. 61: 557-566. PMID 4417815 DOI: 10.1016/0003-2697(74)90424-2  0.368
1973 Van Eikeren P, White WA, Chipman DM. Synthesis of oligosaccharides containing 2-acetamido-2-deoxyxylose by chemical and enzymic methods The Journal of Organic Chemistry. 38: 1831-1836. DOI: 10.1021/Jo00950A013  0.391
1972 Steffens JJ, Cross JP, Chipman DM. Reactions of dihydronicotinamides II. The acid-catalyzed dimerization of 1-benzyl-1,4-dihydronicotinamide Tetrahedron Letters. 13: 4883-4886. DOI: 10.1016/S0040-4039(01)94456-9  0.344
1972 VAN EIKEREN P, CHIPMAN DM. ChemInform Abstract: SUBSTRAT-VERFORMUNG BEI DER KATALYSE DURCH LYSOZYM, RK. VON LYSOZYM MIT OLIGOSACCHARIDEN, DIE N-ACETYL-XYLOSAMIN ENTHALTEN Chemischer Informationsdienst. 3. DOI: 10.1002/Chin.197238392  0.302
1965 Breslow R, Chipman D. Mixed metal complexes as enzyme models. I. Intracomplex nucleophilic catalysis by an oxime anion. Journal of the American Chemical Society. 87: 4195-4196. PMID 5845280 DOI: 10.1021/Ja01096A039  0.503
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