Leon French - Publications

Affiliations: 
Centre for Addiction and Mental Health (CAMH) 
Area:
neuroinformatics, genomics, bioinformatics, neuroanatomy

38/64 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Park MTM, Jeon P, French L, Dempster K, Chakravarty MM, MacKinley M, Richard J, Khan AR, Théberge J, Palaniyappan L. Microstructural imaging and transcriptomics of the basal forebrain in first-episode psychosis. Translational Psychiatry. 12: 358. PMID 36050318 DOI: 10.1038/s41398-022-02136-0  0.479
2022 Kim EH, Howard D, Chen Y, Tripathy SJ, French L. : A Tool to Visualize Gene Expression Across the Laminar Architecture of the Human Neocortex. Frontiers in Neuroinformatics. 16: 753770. PMID 35281717 DOI: 10.3389/fninf.2022.753770  0.67
2021 Wu W, Howard D, Sibille E, French L. Differential and spatial expression meta-analysis of genes identified in genome-wide association studies of depression. Translational Psychiatry. 11: 8. PMID 33414381 DOI: 10.1038/s41398-020-01127-3  0.318
2020 Vidal-Pineiro D, Parker N, Shin J, French L, Grydeland H, Jackowski AP, Mowinckel AM, Patel Y, Pausova Z, Salum G, Sørensen Ø, Walhovd KB, Paus T, Fjell AM. Cellular correlates of cortical thinning throughout the lifespan. Scientific Reports. 10: 21803. PMID 33311571 DOI: 10.1038/s41598-020-78471-3  0.761
2020 Patel S, Howard D, Man A, Schwartz D, Jee J, Felsky D, Pausova Z, Paus T, French L. Donor specific transcriptomic analysis of Alzheimer's disease associated hypometabolism highlights a unique donor, ribosomal proteins and microglia. Eneuro. PMID 33234543 DOI: 10.1523/ENEURO.0255-20.2020  0.743
2020 Patel Y, Parker N, Shin J, Howard D, French L, Thomopoulos SI, Pozzi E, Abe Y, Abé C, et al. Virtual Histology of Cortical Thickness and Shared Neurobiology in 6 Psychiatric Disorders. Jama Psychiatry. PMID 32857118 DOI: 10.1001/Jamapsychiatry.2020.2694  0.717
2020 Howard D, Negraes P, Voineskos AN, Kaplan AS, Muotri AR, Duvvuri V, French L. Molecular neuroanatomy of anorexia nervosa. Scientific Reports. 10: 11411. PMID 32651428 DOI: 10.1038/S41598-020-67692-1  0.41
2020 Patel Y, Parker N, Shin J, Howard D, French L, Thomopoulos SI, Pozzi E, van Rooij D, Buitelaar JK, Hoogman M, Franke B, Andreassen OA, Hibar DP, Ching CR, Schmaal L, et al. Virtual Histology of Cortical Thickness Reveals Shared Neurobiology Across Six Psychiatric Disorders Biological Psychiatry. 87: S239-S240. DOI: 10.1016/J.Biopsych.2020.02.1188  0.75
2019 Ibrahim C, Le Foll B, French L. Transcriptomic Characterization of the Human Insular Cortex and Claustrum. Frontiers in Neuroanatomy. 13: 94. PMID 31827426 DOI: 10.3389/Fnana.2019.00094  0.467
2019 Parker N, Vidal-Pineiro D, French L, Shin J, Adams HHH, Brodaty H, Cox SR, Deary IJ, Fjell AM, Frenzel S, Grabe H, Hosten N, Ikram MA, Jiang J, Knol MJ, et al. Corticosteroids and Regional Variations in Thickness of the Human Cerebral Cortex across the Lifespan. Cerebral Cortex (New York, N.Y. : 1991). PMID 31240317 DOI: 10.1093/Cercor/Bhz108  0.792
2018 Shukla R, Prevot TD, French L, Isserlin R, Rocco BR, Banasr M, Bader GD, Sibille E. The Relative Contributions of Cell-Dependent Cortical Microcircuit Aging to Cognition and Anxiety. Biological Psychiatry. PMID 30446205 DOI: 10.1016/J.Biopsych.2018.09.019  0.378
2018 Le Foll B, French L. Transcriptomic Characterization of the Human Habenula Highlights Drug Metabolism and the Neuroimmune System. Frontiers in Neuroscience. 12: 742. PMID 30429765 DOI: 10.3389/Fnins.2018.00742  0.399
2018 Yee Y, Fernandes DJ, French L, Ellegood J, Cahill LS, Vousden DA, Spencer Noakes L, Scholz J, van Eede MC, Nieman BJ, Sled JG, Lerch JP. Structural covariance of brain region volumes is associated with both structural connectivity and transcriptomic similarity. Neuroimage. PMID 29782994 DOI: 10.1016/J.Neuroimage.2018.05.028  0.443
2018 Miles AE, Voineskos AN, French L, Kaplan AS. Subcortical volume and cortical surface architecture in women with acute and remitted anorexia nervosa: An exploratory neuroimaging study. Journal of Psychiatric Research. 102: 179-185. PMID 29680574 DOI: 10.1016/J.Jpsychires.2018.04.010  0.354
2018 Ritchie J, Pantazatos SP, French L. Transcriptomic characterization of MRI contrast with focus on the T1-w/T2-w ratio in the cerebral cortex. Neuroimage. PMID 29567503 DOI: 10.1016/J.Neuroimage.2018.03.027  0.335
2017 Shin J, French L, Xu T, Leonard G, Perron M, Pike GB, Richer L, Veillette S, Pausova Z, Paus T. Cell-Specific Gene-Expression Profiles and Cortical Thickness in the Human Brain. Cerebral Cortex (New York, N.Y. : 1991). 1-11. PMID 28968835 DOI: 10.1093/Cercor/Bhx197  0.777
2017 French L, Ma T, Oh H, Tseng GC, Sibille E. Age-Related Gene Expression in the Frontal Cortex Suggests Synaptic Function Changes in Specific Inhibitory Neuron Subtypes. Frontiers in Aging Neuroscience. 9: 162. PMID 28611654 DOI: 10.3389/fnagi.2017.00162  0.327
2017 Harripaul R, Vasli N, Mikhailov A, Rafiq MA, Mittal K, Windpassinger C, Sheikh TI, Noor A, Mahmood H, Downey S, Johnson M, Vleuten K, Bell L, Ilyas M, Khan FS, ... ... French L, et al. Mapping autosomal recessive intellectual disability: combined microarray and exome sequencing identifies 26 novel candidate genes in 192 consanguineous families. Molecular Psychiatry. PMID 28397838 DOI: 10.1038/Mp.2017.60  0.335
2017 Wong AP, French L, Leonard G, Perron M, Pike GB, Richer L, Veillette S, Pausova Z, Paus T. Inter-Regional Variations in Gene Expression and Age-Related Cortical Thinning in the Adolescent Brain. Cerebral Cortex (New York, N.Y. : 1991). 1-10. PMID 28334178 DOI: 10.1093/Cercor/Bhx040  0.756
2016 Wagner F, Bernard R, Derst C, French L, Veh RW. Microarray analysis of transcripts with elevated expressions in the rat medial or lateral habenula suggest fast GABAergic excitation in the medial habenula and habenular involvement in the regulation of feeding and energy balance. Brain Structure & Function. PMID 26888156 DOI: 10.1007/S00429-016-1195-Z  0.393
2015 French L, Paus T. A FreeSurfer view of the cortical transcriptome generated from the Allen Human Brain Atlas. Frontiers in Neuroscience. 9: 323. PMID 26441498 DOI: 10.3389/Fnins.2015.00323  0.585
2015 French L, Gray C, Leonard G, Perron M, Pike GB, Richer L, Séguin JR, Veillette S, Evans CJ, Artiges E, Banaschewski T, Bokde AW, Bromberg U, Bruehl R, Buchel C, et al. Early Cannabis Use, Polygenic Risk Score for Schizophrenia and Brain Maturation in Adolescence. Jama Psychiatry. PMID 26308966 DOI: 10.1001/Jamapsychiatry.2015.1131  0.752
2015 French L, Liu P, Marais O, Koreman T, Tseng L, Lai A, Pavlidis P. Text mining for neuroanatomy using WhiteText with an updated corpus and a new web application. Frontiers in Neuroinformatics. 9: 13. PMID 26052282 DOI: 10.3389/Fninf.2015.00013  0.545
2015 Pesaresi M, Soon-Shiong R, French L, Kaplan DR, Miller FD, Paus T. Axon diameter and axonal transport: In vivo and in vitro effects of androgens. Neuroimage. 115: 191-201. PMID 25956809 DOI: 10.1016/J.Neuroimage.2015.04.048  0.442
2015 Lee KW, Richmond R, Hu P, French L, Shin J, Bourdon C, Reischl E, Waldenberger M, Zeilinger S, Gaunt T, McArdle W, Ring S, Woodward G, Bouchard L, Gaudet D, et al. Prenatal exposure to maternal cigarette smoking and DNA methylation: epigenome-wide association in a discovery sample of adolescents and replication in an independent cohort at birth through 17 years of age. Environmental Health Perspectives. 123: 193-9. PMID 25325234 DOI: 10.1289/Ehp.1408614  0.662
2014 Liscovitch N, French L. Differential Co-Expression between α-Synuclein and IFN-γ Signaling Genes across Development and in Parkinson's Disease. Plos One. 9: e115029. PMID 25493648 DOI: 10.1371/Journal.Pone.0115029  0.377
2014 Wagner F, French L, Veh RW. Transcriptomic-anatomic analysis of the mouse habenula uncovers a high molecular heterogeneity among neurons in the lateral complex, while gene expression in the medial complex largely obeys subnuclear boundaries. Brain Structure & Function. PMID 25244943 DOI: 10.1007/S00429-014-0891-9  0.374
2014 Dickie EW, Tahmasebi A, French L, Kovacevic N, Banaschewski T, Barker GJ, Bokde A, Büchel C, Conrod P, Flor H, Garavan H, Gallinat J, Gowland P, Heinz A, Ittermann B, et al. Global genetic variations predict brain response to faces. Plos Genetics. 10: e1004523. PMID 25122193 DOI: 10.1371/Journal.Pgen.1004523  0.754
2014 Paus T, Pesaresi M, French L. White matter as a transport system. Neuroscience. 276: 117-25. PMID 24508743 DOI: 10.1016/J.Neuroscience.2014.01.055  0.451
2014 Dickie EW, Tahmasebi A, French L, Kovacevic N, Banaschewski T, Barker GJ, Bokde A, Büchel C, Conrod PJ, Flor H, Garavan H, Gallinat J, Gowland P, Heinz A, Ittermann B, et al. Correction: Global genetic variations predict brain response to faces Plos Genetics. DOI: 10.1371/Journal.Pgen.1004802  0.776
2013 Tan PP, French L, Pavlidis P. Neuron-Enriched Gene Expression Patterns are Regionally Anti-Correlated with Oligodendrocyte-Enriched Patterns in the Adult Mouse and Human Brain. Frontiers in Neuroscience. 7: 5. PMID 23440889 DOI: 10.3389/Fnins.2013.00005  0.629
2012 French L, Lane S, Xu L, Siu C, Kwok C, Chen Y, Krebs C, Pavlidis P. Application and evaluation of automated methods to extract neuroanatomical connectivity statements from free text. Bioinformatics (Oxford, England). 28: 2963-70. PMID 22954628 DOI: 10.1093/Bioinformatics/Bts542  0.547
2012 French L, Pavlidis P. Using text mining to link journal articles to neuroanatomical databases. The Journal of Comparative Neurology. 520: 1772-83. PMID 22120205 DOI: 10.1002/Cne.23012  0.578
2011 French L, Tan PP, Pavlidis P. Large-Scale Analysis of Gene Expression and Connectivity in the Rodent Brain: Insights through Data Integration. Frontiers in Neuroinformatics. 5: 12. PMID 21863139 DOI: 10.3389/Fninf.2011.00012  0.643
2011 French L, Pavlidis P. Relationships between gene expression and brain wiring in the adult rodent brain. Plos Computational Biology. 7: e1001049. PMID 21253556 DOI: 10.7490/F1000Research.1007.1  0.66
2009 French L, Lane S, Xu L, Pavlidis P. Automated recognition of brain region mentions in neuroscience literature. Frontiers in Neuroinformatics. 3: 29. PMID 19750194 DOI: 10.3389/Neuro.11.029.2009  0.586
2009 French L, Lane S, Law T, Xu L, Pavlidis P. Application and evaluation of automated semantic annotation of gene expression experiments. Bioinformatics (Oxford, England). 25: 1543-9. PMID 19376825 DOI: 10.1093/Bioinformatics/Btp259  0.526
2007 French L, Pavlidis P. Informatics in neuroscience. Briefings in Bioinformatics. 8: 446-56. PMID 17932081 DOI: 10.1093/Bib/Bbm047  0.492
Low-probability matches (unlikely to be authored by this person)
2020 Chen R, Wang K, Yu J, Howard D, French L, Chen Z, Wen C, Xu Z. The Spatial and Cell-Type Distribution of SARS-CoV-2 Receptor ACE2 in the Human and Mouse Brains. Frontiers in Neurology. 11: 573095. PMID 33551947 DOI: 10.3389/fneur.2020.573095  0.298
2019 Miles AE, Kaplan AS, French L, Voineskos AN. White matter microstructure in women with acute and remitted anorexia nervosa: an exploratory neuroimaging study. Brain Imaging and Behavior. PMID 31605281 DOI: 10.1007/S11682-019-00193-6  0.294
2021 Patel S, Howard D, Chowdhury N, Derieux C, Wellslager B, Yilmaz Ö, French L. Characterization of Human Genes Modulated by Highlights the Ribosome, Hypothalamus, and Cholinergic Neurons. Frontiers in Immunology. 12: 646259. PMID 34194426 DOI: 10.3389/fimmu.2021.646259  0.293
2022 Felsky D, Santa-Maria I, Cosacak MI, French L, Schneider JA, Bennett DA, De Jager PL, Kizil C, Tosto G. The Caribbean-Hispanic Alzheimer's disease brain transcriptome reveals ancestry-specific disease mechanisms. Neurobiology of Disease. 105938. PMID 36462719 DOI: 10.1016/j.nbd.2022.105938  0.274
2017 Lisoway A, Zai CC, Tiwari AK, Harripaul R, Freeman N, Oh G, French L, Kaminsky ZA, Kennedy J. 231. Serotonin Transporter Gene Methylation and Antidepressant Treatment of Major Depressive Disorder Biological Psychiatry. 81. DOI: 10.1016/J.Biopsych.2017.02.245  0.272
2019 Lisoway A, Zai C, Tiwari AK, Harripaul R, Freeman N, French L, Kaminsky Z, Kennedy JL. Dna Methylation And 5-Httlpr Genotype Of The Serotonin Transporter Gene (Slc6A4) In Antidepressant Treatment Response Of Major Depressive Disorder European Neuropsychopharmacology. 29. DOI: 10.1016/J.Euroneuro.2017.08.392  0.269
2019 Patel S, Wu W, Sibille E, French L. S38Neuroanatomical Characterization Of Genes Genetically Associated With Depression European Neuropsychopharmacology. 29. DOI: 10.1016/J.Euroneuro.2019.08.039  0.269
2023 Yee Y, Ellegood J, French L, Lerch JP. Organization of thalamocortical structural covariance and a corresponding 3D atlas of the mouse thalamus. Neuroimage. 120453. PMID 37979895 DOI: 10.1016/j.neuroimage.2023.120453  0.267
2022 Abed-Esfahani P, Darwin BC, Howard D, Wang N, Kim E, Lerch J, French L. Evaluation of deep convolutional neural networks for in situ hybridization gene expression image representation. Plos One. 17: e0262717. PMID 35073334 DOI: 10.1371/journal.pone.0262717  0.255
2021 Patel S, Howard D, French L. A pH-eQTL Interaction at the - Parkinson's Disease Risk Locus in the Substantia Nigra. Frontiers in Aging Neuroscience. 13: 690632. PMID 34305570 DOI: 10.3389/fnagi.2021.690632  0.23
2002 Nobile C, Hinzmann B, Scannapieco P, Siebert R, Zimbello R, Perez-Tur J, Sarafidou T, Moschonas NK, French L, Deloukas P, Ciccodicola A, Gesk S, Poza JJ, Lo Nigro C, Seri M, et al. Identification and characterization of a novel human brain-specific gene, homologous to S. scrofa tmp83.5, in the chromosome 10q24 critical region for temporal lobe epilepsy and spastic paraplegia. Gene. 282: 87-94. PMID 11814680 DOI: 10.1016/S0378-1119(01)00846-0  0.224
2005 French L, Ngom A, Rueda L. Fast protein superfamily classification using principal component null space analysis Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 3501: 158-169. DOI: 10.1007/11424918_17  0.224
2018 Seney ML, Huo Z, Cahill K, French L, Puralewski R, Zhang J, Logan RW, Tseng G, Lewis DA, Sibille E. Opposite Molecular Signatures of Depression in Men and Women. Biological Psychiatry. PMID 29548746 DOI: 10.1016/J.Biopsych.2018.01.017  0.216
2021 Tomoda T, Sumitomo A, Shukla R, Hirota-Tsuyada Y, Miyachi H, Oh H, French L, Sibille E. BDNF controls GABAR trafficking and related cognitive processes via autophagic regulation of p62. Neuropsychopharmacology : Official Publication of the American College of Neuropsychopharmacology. PMID 34341497 DOI: 10.1038/s41386-021-01116-0  0.213
2020 Howard D, Maslej MM, Lee J, Ritchie J, Woollard G, French L. Transfer Learning for Risk Classification of Social Media Posts: Model Evaluation Study. Journal of Medical Internet Research. 22: e15371. PMID 32401222 DOI: 10.2196/15371  0.207
2019 Ko S, Epp J, Mittal K, Sheikh T, Ha V, Degagne B, Mikhailov A, French L, Josselyn SA, Vincent JB, Frankland P. Ptchd1 exon3 truncating mutations recapitulate more clinically relevant autistic-like traits in mice Ibro Reports. 6: S507. DOI: 10.1016/J.Ibror.2019.07.1582  0.204
2023 Ballouz S, Kawaguchi RK, Pena MT, Fischer S, Crow M, French L, Knight FM, Adams LB, Gillis J. The transcriptional legacy of developmental stochasticity. Nature Communications. 14: 7226. PMID 37940702 DOI: 10.1038/s41467-023-43024-5  0.189
2001 Murton NJ, French L, Toomes C, Joseph SS, Rehman I, Hopkins BL, Inglehearn CF, Churchill AJ. A high-density transcript map of the human dominant optic atrophy OPA1 gene locus and re-evaluation of evidence for a founder haplotype. Cytogenetics and Cell Genetics. 92: 97-102. PMID 11306804 DOI: 10.1159/000056876  0.176
2001 Deloukas P, Matthews LH, Ashurst J, Burton J, Gilbert JG, Jones M, Stavrides G, Almeida JP, Babbage AK, Bagguley CL, Bailey J, Barlow KF, Bates KN, Beard LM, Beare DM, ... ... French L, et al. The DNA sequence and comparative analysis of human chromosome 20. Nature. 414: 865-71. PMID 11780052 DOI: 10.1038/414865A  0.118
2008 Vila-Rodriguez F, French L, Barakauskas V, Mead CL, Khorram B. Thalamic shape: a possible endophenotype. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 28: 3533-4. PMID 18385311 DOI: 10.1523/JNEUROSCI.0553-08.2008  0.108
2001 Soderlund C, Humphray S, Dunham A, French L. Contigs built with fingerprints, markers, and FPC V4.7. Genome Research. 10: 1772-87. PMID 11076862 DOI: 10.1101/GR.GR-1375R  0.086
2000 Deloukas P, French L, Meitinger T, Moschonas NK. Report of the third international workshop on human chromosome 10 mapping and sequencing 1999. Cytogenetics and Cell Genetics. 90: 1-12. PMID 11060438 DOI: 10.1159/000015653  0.049
2001 Kahl C, Gesk S, Harder L, Harbott J, French L, Deloukas P, Grote W, Schlegelberger B, Siebert R. Detection of translocations involving the HOX11/TCL3-locus in 10q24 by interphase fluorescence in situ hybridization. Cancer Genetics and Cytogenetics. 129: 80-4. PMID 11520572 DOI: 10.1016/S0165-4608(01)00426-5  0.048
2019 Zhan SH, French L. Sequence similarity searches for morphine biosynthesis enzymes in bacteria yield putative targets for understanding associations between infection and opiate administration. Journal of Medical Microbiology. PMID 31107204 DOI: 10.1099/jmm.0.001001  0.039
2022 Leung YW, Park B, Heo R, Adikari A, Chackochan S, Wong J, Alie E, Gancarz M, Kacala M, Hirst G, de Silva D, French L, Bender J, Mishna F, Gratzer D, et al. Providing Care Beyond Therapy Sessions With a Natural Language Processing-Based Recommender System That Identifies Cancer Patients Who Experience Psychosocial Challenges and Provides Self-care Support: Pilot Study. Jmir Cancer. 8: e35893. PMID 35904877 DOI: 10.2196/35893  0.032
2000 Baro DJ, Ayali A, French L, Scholz NL, Labenia J, Lanning CC, Graubard K, Harris-Warrick RM. Molecular Underpinnings of Motor Pattern Generation: Differential Targeting of Shal and Shaker in the Pyloric Motor System The Journal of Neuroscience. 20: 6619-6630. DOI: 10.1523/JNEUROSCI.20-17-06619.2000  0.031
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