Hyun Jung Kim, PhD - Publications

Affiliations: 
2015-2022 Biomedical Engineering University of Texas at Austin, Austin, Texas, U.S.A. 
 2022- Inflammation and Immunity Cleveland Clinic Lerner Research Institute 
Area:
human organs-on-chips, microbiology, microfluidics, tissue engineering
Website:
https://sites.utexas.edu/biome/

50 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Poplaski V, Bomidi C, Kambal A, Nguyen-Phuc H, Di Rienzi SC, Danhof HA, Zeng XL, Feagins LA, Deng N, Vilar E, McAllister F, Coarfa C, Min S, Kim HJ, Shukla R, et al. Human intestinal organoids from Cronkhite-Canada syndrome patients reveal link between serotonin and proliferation. The Journal of Clinical Investigation. 133. PMID 37909332 DOI: 10.1172/JCI166884  0.702
2023 Shin W, Kim HJ. In Vitro Morphogenesis and Differentiation of Human Intestinal Epithelium in a Gut-on-a-Chip. Methods in Molecular Biology (Clifton, N.J.). 2650: 197-206. PMID 37310633 DOI: 10.1007/978-1-0716-3076-1_15  0.791
2022 Min S, Than N, Shin YC, Hu G, Shin W, Ambrosini YM, Kim HJ. Live probiotic bacteria administered in a pathomimetic Leaky Gut Chip ameliorate impaired epithelial barrier and mucosal inflammation. Scientific Reports. 12: 22641. PMID 36587177 DOI: 10.1038/s41598-022-27300-w  0.718
2022 Shin W, Su Z, Yi SS, Kim HJ. Single-cell transcriptomic mapping of intestinal epithelium that undergoes 3D morphogenesis and mechanodynamic stimulation in a gut-on-a-chip. Iscience. 25: 105521. PMID 36425760 DOI: 10.1016/j.isci.2022.105521  0.764
2022 Shin W, Kim HJ. Editorial: Advances in tissue repair and regeneration. Frontiers in Medical Technology. 4: 1066486. PMID 36405568 DOI: 10.3389/fmedt.2022.1066486  0.653
2022 Oh C, Kim HJ, Kim HM. Transepithelial channels for leukocytes in the junctional epithelium. Journal of Periodontal Research. PMID 35920408 DOI: 10.1111/jre.13043  0.309
2022 Yoon HJ, Lee S, Kim TY, Yu SE, Kim HS, Chung YS, Chung S, Park S, Shin YC, Wang EK, Noh J, Kim HJ, Ku CR, Koh H, Kim CS, et al. Sprayable nanomicelle hydrogels and inflammatory bowel disease patient cell chips for development of intestinal lesion-specific therapy. Bioactive Materials. 18: 433-445. PMID 35415304 DOI: 10.1016/j.bioactmat.2022.03.031  0.571
2022 Shin W, Kim HJ. Draft Genome Sequences of a Strain and a Strain Isolated from a Human Stool Sample. Microbiology Resource Announcements. e0001122. PMID 35319259 DOI: 10.1128/mra.00011-22  0.676
2022 Shin W, Kim HJ. 3D in vitro morphogenesis of human intestinal epithelium in a gut-on-a-chip or a hybrid chip with a cell culture insert. Nature Protocols. PMID 35110737 DOI: 10.1038/s41596-021-00674-3  0.783
2022 Youn J, Hong H, Shin W, Kim D, Kim HJ, Kim DS. Thin and stretchable extracellular matrix (ECM) membrane reinforced by nanofiber scaffolds for developing in vitro barrier models. Biofabrication. PMID 35062009 DOI: 10.1088/1758-5090/ac4dd7  0.702
2021 Lee H, Shin W, Kim HJ, Kim J. Turn-On Fluorescence Sensing of Oxygen with Dendrimer-Encapsulated Platinum Nanoparticles as Tunable Oxidase Mimics for Spatially Resolved Measurement of Oxygen Gradient in a Human Gut-on-a-Chip. Analytical Chemistry. PMID 34807579 DOI: 10.1021/acs.analchem.1c03891  0.674
2021 Han H, Park Y, Choi YM, Yong U, Kang B, Shin W, Min S, Kim HJ, Jang J. A Bioprinted Tubular Intestine Model using a Colon-Specific Extracellular Matrix Bioink. Advanced Healthcare Materials. e2101768. PMID 34747158 DOI: 10.1002/adhm.202101768  0.828
2021 Chong HB, Youn J, Shin W, Kim HJ, Kim DS. Multiplex recreation of human intestinal morphogenesis on a multi-well insert platform by basolateral convective flow. Lab On a Chip. PMID 34323906 DOI: 10.1039/d1lc00404b  0.774
2020 Shin W, Ambrosini YM, Shin YC, Wu A, Min S, Koh D, Park S, Kim S, Koh H, Kim HJ. Robust Formation of an Epithelial Layer of Human Intestinal Organoids in a Polydimethylsiloxane-Based Gut-on-a-Chip Microdevice. Frontiers in Medical Technology. 2. PMID 33532747 DOI: 10.3389/fmedt.2020.00002  0.765
2020 Shin W, Wu A, Min S, Shin YC, Fleming RYD, Eckhardt SG, Kim HJ. Spatiotemporal Gradient and Instability of Wnt Induce Heterogeneous Growth and Differentiation of Human Intestinal Organoids. Iscience. 23: 101372. PMID 32745985 DOI: 10.1016/J.Isci.2020.101372  0.795
2020 Miller CP, Shin W, Ahn EH, Kim HJ, Kim DH. Engineering Microphysiological Immune System Responses on Chips. Trends in Biotechnology. 38: 857-872. PMID 32673588 DOI: 10.1016/J.Tibtech.2020.01.003  0.726
2020 Shin YC, Shin W, Koh D, Wu A, Ambrosini YM, Min S, Eckhardt SG, Fleming RYD, Kim S, Park S, Koh H, Yoo TK, Kim HJ. Three-Dimensional Regeneration of Patient-Derived Intestinal Organoid Epithelium in a Physiodynamic Mucosal Interface-on-a-Chip. Micromachines. 11. PMID 32645991 DOI: 10.3390/Mi11070663  0.771
2020 Ambrosini YM, Shin W, Min S, Kim HJ. Microphysiological Engineering of Immune Responses in Intestinal Inflammation. Immune Network. 20: e13. PMID 32395365 DOI: 10.4110/In.2020.20.E13  0.789
2020 Ambrosini YM, Park Y, Jergens AE, Shin W, Min S, Atherly T, Borcherding DC, Jang J, Allenspach K, Mochel JP, Kim HJ. Recapitulation of the accessible interface of biopsy-derived canine intestinal organoids to study epithelial-luminal interactions. Plos One. 15: e0231423. PMID 32302323 DOI: 10.1371/Journal.Pone.0231423  0.804
2019 Ambrosini YM, Borcherding D, Kanthasamy A, Kim HJ, Willette AA, Jergens A, Allenspach K, Mochel JP. The Gut-Brain Axis in Neurodegenerative Diseases and Relevance of the Canine Model: A Review. Frontiers in Aging Neuroscience. 11: 130. PMID 31275138 DOI: 10.3389/Fnagi.2019.00130  0.747
2019 Shin W, Hackley LA, Kim HJ. "Good Fences Make Good Neighbors": How does the Human Gut Microchip Unravel Mechanism of Intestinal Inflammation? Gut Microbes. 1-6. PMID 31198078 DOI: 10.1080/19490976.2019.1626684  0.793
2019 Shin W, Hinojosa CD, Ingber DE, Kim HJ. Human Intestinal Morphogenesis Controlled by Transepithelial Morphogen Gradient and Flow-Dependent Physical Cues in a Microengineered Gut-on-a-Chip. Iscience. 15: 391-406. PMID 31108394 DOI: 10.1016/J.Isci.2019.04.037  0.782
2019 Shin W, Wu A, Massidda MW, Foster C, Thomas N, Lee DW, Koh H, Ju Y, Kim J, Kim HJ. A Robust Longitudinal Co-culture of Obligate Anaerobic Gut Microbiome With Human Intestinal Epithelium in an Anoxic-Oxic Interface-on-a-Chip. Frontiers in Bioengineering and Biotechnology. 7: 13. PMID 30792981 DOI: 10.3389/Fbioe.2019.00013  0.785
2018 Shin W, Kim HJ. Intestinal barrier dysfunction orchestrates the onset of inflammatory host-microbiome cross-talk in a human gut inflammation-on-a-chip. Proceedings of the National Academy of Sciences of the United States of America. PMID 30348765 DOI: 10.1073/Pnas.1810819115  0.756
2018 Shin W, Kim HJ. Pathomimetic modeling of human intestinal diseases and underlying host-gut microbiome interactions in a gut-on-a-chip. Methods in Cell Biology. 146: 135-148. PMID 30037458 DOI: 10.1016/Bs.Mcb.2018.05.006  0.795
2018 Bein A, Shin W, Jalili-Firoozinezhad S, Park MH, Sontheimer-Phelps A, Tovaglieri A, Chalkiadaki A, Kim HJ, Ingber DE. Microfluidic Organ-on-a-Chip Models of Human Intestine. Cellular and Molecular Gastroenterology and Hepatology. 5: 659-668. PMID 29713674 DOI: 10.1016/J.Jcmgh.2017.12.010  0.806
2018 Jalili-Firoozinezhad S, Prantil-Baun R, Jiang A, Potla R, Mammoto T, Weaver JC, Ferrante TC, Kim HJ, Cabral JMS, Levy O, Ingber DE. Modeling radiation injury-induced cell death and countermeasure drug responses in a human Gut-on-a-Chip. Cell Death & Disease. 9: 223. PMID 29445080 DOI: 10.1038/S41419-018-0304-8  0.497
2017 Mochel JP, Jergens AE, Kingsbury D, Kim HJ, Martín MG, Allenspach K. Intestinal Stem Cells to Advance Drug Development, Precision, and Regenerative Medicine: A Paradigm Shift in Translational Research. The Aaps Journal. 20: 17. PMID 29234895 DOI: 10.1208/s12248-017-0178-1  0.335
2017 Park GS, Park MH, Shin W, Zhao C, Sheikh S, Oh SJ, Kim HJ. Emulating Host-Microbiome Ecosystem of Human Gastrointestinal Tract in Vitro. Stem Cell Reviews. PMID 28488235 DOI: 10.1007/S12015-017-9739-Z  0.758
2016 Choi JH, Lee J, Shin W, Choi JW, Kim HJ. Priming nanoparticle-guided diagnostics and therapeutics towards human organs-on-chips microphysiological system. Nano Convergence. 3: 24. PMID 28191434 DOI: 10.1186/S40580-016-0084-8  0.708
2016 Kim HJ, Lee J, Choi JH, Bahinski A, Ingber DE. Co-culture of Living Microbiome with Microengineered Human Intestinal Villi in a Gut-on-a-Chip Microfluidic Device. Journal of Visualized Experiments : Jove. PMID 27684630 DOI: 10.3791/54344  0.606
2016 Lee J, Choi JH, Kim HJ. Human Gut-on-a-Chip technology: Will this revolutionize our understanding of IBD and future treatments? Expert Review of Gastroenterology & Hepatology. PMID 27291426 DOI: 10.1080/17474124.2016.1200466  0.446
2015 Kim HJ, Li H, Collins JJ, Ingber DE. Contributions of microbiome and mechanical deformation to intestinal bacterial overgrowth and inflammation in a human gut-on-a-chip. Proceedings of the National Academy of Sciences of the United States of America. PMID 26668389 DOI: 10.1073/Pnas.1522193112  0.613
2015 Benam KH, Dauth S, Hassell B, Herland A, Jain A, Jang KJ, Karalis K, Kim HJ, MacQueen L, Mahmoodian R, Musah S, Torisawa YS, van der Meer AD, Villenave R, Yadid M, et al. Engineered in vitro disease models. Annual Review of Pathology. 10: 195-262. PMID 25621660 DOI: 10.1146/Annurev-Pathol-012414-040418  0.793
2015 Odijk M, van der Meer AD, Levner D, Kim HJ, van der Helm MW, Segerink LI, Frimat JP, Hamilton GA, Ingber DE, van den Berg A. Measuring direct current trans-epithelial electrical resistance in organ-on-a-chip microsystems. Lab On a Chip. 15: 745-52. PMID 25427650 DOI: 10.1039/C4Lc01219D  0.459
2014 Park HH, Zhang X, Cho Y, Kim DW, Kim J, Lee KW, Choi J, Lee HK, Jung SH, Her EJ, Kim CH, Moon AY, Shin CS, Shin HB, Sung HK, ... ... Kim HJ, et al. Wafer-scale surface roughening for enhanced light extraction of high power AlGaInP-based light-emitting diodes. Optics Express. 22: A723-34. PMID 24922380 DOI: 10.1364/OE.22.00A723  0.44
2013 Huh D, Kim HJ, Fraser JP, Shea DE, Khan M, Bahinski A, Hamilton GA, Ingber DE. Microfabrication of human organs-on-chips. Nature Protocols. 8: 2135-57. PMID 24113786 DOI: 10.1038/Nprot.2013.137  0.536
2013 Kim HJ, Ingber DE. Gut-on-a-Chip microenvironment induces human intestinal cells to undergo villus differentiation. Integrative Biology : Quantitative Biosciences From Nano to Macro. 5: 1130-40. PMID 23817533 DOI: 10.1039/C3Ib40126J  0.627
2012 Huh D, Torisawa YS, Hamilton GA, Kim HJ, Ingber DE. Microengineered physiological biomimicry: organs-on-chips. Lab On a Chip. 12: 2156-64. PMID 22555377 DOI: 10.1039/C2Lc40089H  0.49
2012 Jung JK, Kim HJ, Lee HK, Kim SS, Shin CS, Kim JT. Fracture incidence and risk of osteoporosis in female type 2 diabetic patients in Korea. Diabetes & Metabolism Journal. 36: 144-50. PMID 22540051 DOI: 10.4093/dmj.2012.36.2.144  0.372
2012 Kim HJ, Huh D, Hamilton G, Ingber DE. Human gut-on-a-chip inhabited by microbial flora that experiences intestinal peristalsis-like motions and flow. Lab On a Chip. 12: 2165-74. PMID 22434367 DOI: 10.1039/C2Lc40074J  0.636
2011 Kim HJ, Du W, Ismagilov RF. Complex function by design using spatially pre-structured synthetic microbial communities: Degradation of pentachlorophenol in the presence of Hg(ii) Integrative Biology. 3: 126-133. PMID 20717565 DOI: 10.1039/C0Ib00019A  0.668
2009 Yang JY, Jung JY, Cho SW, Choi HJ, Kim SW, Kim SY, Kim HJ, Jang CH, Lee MG, Han J, Shin CS. Chloride intracellular channel 1 regulates osteoblast differentiation. Bone. 45: 1175-85. PMID 19703605 DOI: 10.1016/j.bone.2009.08.012  0.485
2009 Liu W, Kim HJ, Lucchetta EM, Du W, Ismagilov RF. Isolation, incubation, and parallel functional testing and identification by FISH of rare microbial single-copy cells from multi-species mixtures using the combination of chemistrode and stochastic confinementY Lab On a Chip - Miniaturisation For Chemistry and Biology. 9: 2153-2162. PMID 19606291 DOI: 10.1039/B904958D  0.683
2008 Chang EJ, Ha J, Oerlemans F, Lee YJ, Lee SW, Ryu J, Kim HJ, Lee Y, Kim HM, Choi JY, Kim JY, Shin CS, Pak YK, Tanaka S, Wieringa B, ... ... Kim HH, et al. Brain-type creatine kinase has a crucial role in osteoclast-mediated bone resorption. Nature Medicine. 14: 966-72. PMID 18724377 DOI: 10.1038/Nm.1860  0.43
2007 Kim JH, Kim HJ, Park HW, Youn SH, Choi DY, Shin CS. Development of inhibitors against lipase and α-glucosidase from derivatives of monascus pigment Fems Microbiology Letters. 276: 93-98. PMID 17937667 DOI: 10.1111/J.1574-6968.2007.00917.X  0.4
2006 Kim HJ, Youn SH, Shin CS. Lipase-catalyzed synthesis of sorbitol-fatty acid esters at extremely high substrate concentrations Journal of Biotechnology. 123: 174-184. PMID 16356573 DOI: 10.1016/J.Jbiotec.2005.11.006  0.401
2005 Moon MW, Kim HJ, Oh TK, Shin CS, Lee JS, Kim SJ, Lee JK. Analyses of enzyme II gene mutants for sugar transport and heterologous expression of fructokinase gene in Corynebacterium glutamicum ATCC 13032 Fems Microbiology Letters. 244: 259-266. PMID 15766777 DOI: 10.1016/J.Femsle.2005.01.053  0.422
2001 Kim HJ, Kwon SH, Kim SW, Park DJ, Shin CS, Park KS, Kim SY, Cho BY, Lee HK. Diagnostic value of serum IGF-I and IGFBP-3 in growth hormone disorders in adults. Hormone Research. 56: 117-23. PMID 11847474  0.379
1998 Shin CS, Kim HJ, Kim MJ, Ju JY. Morphological change and enhanced pigment production of monascus when cocultured with saccharomyces cerevisiae or aspergillus oryzae Biotechnology and Bioengineering. 59: 576-81. PMID 10099374 DOI: 10.1002/(SICI)1097-0290(19980905)59:5<576::AID-BIT7>3.0.CO;2-7  0.466
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