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James Chen - Publications

Affiliations: 
University of California, Los Angeles, Los Angeles, CA 
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Year Citation  Score
2006 Tso CL, Shintaku P, Chen J, Liu Q, Liu J, Chen Z, Yoshimoto K, Mischel PS, Cloughesy TF, Liau LM, Nelson SF. Primary glioblastomas express mesenchymal stem-like properties. Molecular Cancer Research : McR. 4: 607-19. PMID 16966431 DOI: 10.1158/1541-7786.MCR-06-0005  0.405
Low-probability matches (unlikely to be authored by this person)
2006 Huang GT, Sonoyama W, Chen J, Park SH. In vitro characterization of human dental pulp cells: various isolation methods and culturing environments. Cell and Tissue Research. 324: 225-36. PMID 16440193 DOI: 10.1007/s00441-005-0117-9  0.257
2015 Yao Q, Wei B, Liu N, Li C, Guo Y, Shamie AN, Chen J, Tang C, Jin C, Xu Y, Bian X, Zhang X, Wang L. Chondrogenic regeneration using bone marrow clots and a porous polycaprolactone-hydroxyapatite scaffold by three-dimensional printing. Tissue Engineering. Part A. 21: 1388-97. PMID 25530453 DOI: 10.1089/ten.TEA.2014.0280  0.241
2019 Koek R, Langevin J, Krahl S, Chen J, Sultzer D, Mandelkern M, Kulick A. Basolateral amygdala deep brain stimulation for treatment refractory combat PTSD: data from the first two cases Brain Stimulation. 12: 429-430. DOI: 10.1016/J.Brs.2018.12.391  0.213
2014 Chen J, Nelson S, Tzung B, Applebaum H, DeUgarte DA. Costal osteochondroma spicule associated with pleural effusion. Pediatric Surgery International. 30: 357-9. PMID 23653237 DOI: 10.1007/S00383-013-3323-7  0.21
2019 Lai G, Langevin J, Koek R, Krahl S, Bari A, Chen J. Mapping of acute Deep Brain Stimulation (DBS) effects in two patients with refractory post-traumatic stress disorder Brain Stimulation. 12: 473-474. DOI: 10.1016/J.Brs.2018.12.544  0.204
2018 Shaw K, Chen J, Sheppard W, Alazzeh M, Park H, Park D, Shamie AN. Use of the subcutaneous lumbar spine (SLS) index as a predictor for surgical complications in lumbar spine surgery. The Spine Journal : Official Journal of the North American Spine Society. PMID 29709549 DOI: 10.1016/j.spinee.2018.04.018  0.202
2011 Chen J, Bradshaw J, Nagy P. Has the Picture Archiving and Communication System (PACS) become a commodity? Journal of Digital Imaging. 24: 6-10. PMID 20419387 DOI: 10.1007/s10278-010-9299-0  0.2
2012 Lee C, Fotovati A, Triscott J, Chen J, Venugopal C, Singhal A, Dunham C, Kerr JM, Verreault M, Yip S, Wakimoto H, Jones C, Jayanthan A, Narendran A, Singh SK, et al. Polo-like kinase 1 inhibition kills glioblastoma multiforme brain tumor cells in part through loss of SOX2 and delays tumor progression in mice. Stem Cells (Dayton, Ohio). 30: 1064-75. PMID 22415968 DOI: 10.1002/Stem.1081  0.165
2011 Fotovati A, Abu-Ali S, Wang PS, Deleyrolle LP, Lee C, Triscott J, Chen JY, Franciosi S, Nakamura Y, Sugita Y, Uchiumi T, Kuwano M, Leavitt BR, Singh SK, Jury A, et al. YB-1 bridges neural stem cells and brain tumor-initiating cells via its roles in differentiation and cell growth. Cancer Research. 71: 5569-78. PMID 21730024 DOI: 10.1158/0008-5472.Can-10-2805  0.162
2002 Berman DM, Karhadkar SS, Hallahan AR, Pritchard JI, Eberhart CG, Watkins DN, Chen JK, Cooper MK, Taipale J, Olson JM, Beachy PA. Medulloblastoma growth inhibition by hedgehog pathway blockade. Science (New York, N.Y.). 297: 1559-61. PMID 12202832 DOI: 10.1126/Science.1073733  0.157
2016 Chen JL, David J, Cook-Spaeth D, Casey S, Cohen D, Selvendiran K, Bekaii-Saab T, Hays J. Autophagy Induction Results in Enhanced Anoikis-resistance in Models of Peritoneal Disease. Molecular Cancer Research : McR. PMID 27807188 DOI: 10.1158/1541-7786.MCR-16-0200-T  0.157
2010 Firestone AJ, Chen JK. Controlling destiny through chemistry: small-molecule regulators of cell fate. Acs Chemical Biology. 5: 15-34. PMID 20000447 DOI: 10.1021/Cb900249Y  0.149
2016 Schissler AG, Li Q, Chen JL, Kenost C, Achour I, Billheimer DD, Li H, Piegorsch WW, Lussier YA. Analysis of aggregated cell-cell statistical distances within pathways unveils therapeutic-resistance mechanisms in circulating tumor cells. Bioinformatics (Oxford, England). 32: i80-i89. PMID 27307648 DOI: 10.1093/Bioinformatics/Btw248  0.146
2003 Chen JS, Faller DV, Spanjaard RA. Short-chain fatty acid inhibitors of histone deacetylases: promising anticancer therapeutics? Current Cancer Drug Targets. 3: 219-36. PMID 12769690 DOI: 10.2174/1568009033481994  0.14
2023 Walker V, Jin DX, Millis SZ, Nasri E, Corao-Uribe DA, Tan AC, Fridley BL, Chen JL, Seligson ND. Gene partners of the EWSR1 fusion may represent molecularly distinct entities. Translational Oncology. 38: 101795. PMID 37797367 DOI: 10.1016/j.tranon.2023.101795  0.139
2021 Pei L, Jones KA, Shboul ZA, Chen JY, Iftekharuddin KM. Deep Neural Network Analysis of Pathology Images With Integrated Molecular Data for Enhanced Glioma Classification and Grading. Frontiers in Oncology. 11: 668694. PMID 34277415 DOI: 10.3389/fonc.2021.668694  0.139
2012 Lussier YA, Stadler WM, Chen JL. Advantages of genomic complexity: bioinformatics opportunities in microRNA cancer signatures. Journal of the American Medical Informatics Association : Jamia. 19: 156-60. PMID 22101905 DOI: 10.1136/Amiajnl-2011-000419  0.139
2022 Wang EHC, Monga I, Sallee BN, Chen JC, Abdelaziz AR, Perez-Lorenzo R, Bordone LA, Christiano AM. Primary cicatricial alopecias are characterized by dysregulation of shared gene expression pathways. Pnas Nexus. 1: pgac111. PMID 35899069 DOI: 10.1093/pnasnexus/pgac111  0.138
2020 Mruk K, Ciepla P, Piza PA, Alnaqib MA, Chen JK. Targeted cell ablation in zebrafish using optogenetic transcriptional control. Development (Cambridge, England). PMID 32414936 DOI: 10.1242/Dev.183640  0.137
2014 Colen RR, Vangel M, Wang J, Gutman DA, Hwang SN, Wintermark M, Jain R, Jilwan-Nicolas M, Chen JY, Raghavan P, Holder CA, Rubin D, Huang E, Kirby J, Freymann J, et al. Imaging genomic mapping of an invasive MRI phenotype predicts patient outcome and metabolic dysfunction: a TCGA glioma phenotype research group project. Bmc Medical Genomics. 7: 30. PMID 24889866 DOI: 10.1186/1755-8794-7-30  0.134
2010 Yang X, Lee Y, Huang Y, Chen JL, Xing RH, Lussier YA. Stromal microenvironment processes unveiled by biological component analysis of gene expression in xenograft tumor models. Bmc Bioinformatics. 11: S11. PMID 21044358 DOI: 10.1186/1471-2105-11-S9-S11  0.134
2019 Seligson ND, Stets CW, Demoret BW, Awasthi A, Grosenbacher N, Shakya R, Hays JL, Chen JL. Inhibition of histone deacetylase 2 reduces MDM2 expression and reduces tumor growth in dedifferentiated liposarcoma. Oncotarget. 10: 5671-5679. PMID 31620242 DOI: 10.18632/Oncotarget.27144  0.133
2015 Payumo AY, Walker WJ, McQuade LE, Yamazoe S, Chen JK. Optochemical Dissection of T-box Gene-Dependent Medial Floor Plate Development. Acs Chemical Biology. 10: 1466-75. PMID 25781211 DOI: 10.1021/Cb5010178  0.132
2009 Hyman JM, Firestone AJ, Heine VM, Zhao Y, Ocasio CA, Han K, Sun M, Rack PG, Sinha S, Wu JJ, Solow-Cordero DE, Jiang J, Rowitch DH, Chen JK. Small-molecule inhibitors reveal multiple strategies for Hedgehog pathway blockade. Proceedings of the National Academy of Sciences of the United States of America. 106: 14132-7. PMID 19666565 DOI: 10.1073/Pnas.0907134106  0.131
2006 Szabo RM, Anderson KA, Chen JL. Functional outcome of en bloc excision and osteoarticular allograft replacement with the Sauve-Kapandji procedure for Campanacci grade 3 giant-cell tumor of the distal radius. The Journal of Hand Surgery. 31: 1340-8. PMID 17027797 DOI: 10.1016/j.jhsa.2006.06.004  0.13
2021 Seligson ND, Maradiaga RD, Stets CM, Katzenstein HM, Millis SZ, Rogers A, Hays JL, Chen JL. Multiscale-omic assessment of EWSR1-NFATc2 fusion positive sarcomas identifies the mTOR pathway as a potential therapeutic target. Npj Precision Oncology. 5: 43. PMID 34021224 DOI: 10.1038/s41698-021-00177-0  0.13
2018 Seligson ND, Kautto EA, Passen EN, Stets C, Toland AE, Millis SZ, Meyer CF, Hays JL, Chen JL. Functional Loss Defines a Targetable Subset in Leiomyosarcoma. The Oncologist. PMID 30541756 DOI: 10.1634/Theoncologist.2018-0448  0.129
2017 Lehrer M, Bhadra A, Ravikumar V, Chen JY, Wintermark M, Hwang SN, Holder CA, Huang EP, Fevrier-Sullivan B, Freymann JB, Rao A. Multiple-response regression analysis links magnetic resonance imaging features to de-regulated protein expression and pathway activity in lower grade glioma. Oncoscience. 4: 57-66. PMID 28781988 DOI: 10.18632/oncoscience.353  0.128
2005 Chen JS, Faller DV. Histone deacetylase inhibition-mediated post-translational elevation of p27KIP1 protein levels is required for G1 arrest in fibroblasts. Journal of Cellular Physiology. 202: 87-99. PMID 15389542 DOI: 10.1002/Jcp.20094  0.128
2020 Chen JK, Hom ME, Ondrus AE, Sakata-Kato T, Rack PG. Bicyclic imidazolium inhibitors of Gli transcription factor activity. Chemmedchem. PMID 32268014 DOI: 10.1002/Cmdc.202000169  0.127
2017 Ouyang X, Panetta NJ, Talbott MD, Payumo AY, Halluin C, Longaker MT, Chen JK. Hyaluronic acid synthesis is required for zebrafish tail fin regeneration. Plos One. 12: e0171898. PMID 28207787 DOI: 10.1371/Journal.Pone.0171898  0.127
2016 Payumo AY, McQuade LE, Walker WJ, Yamazoe S, Chen JK. Tbx16 regulates hox gene activation in mesodermal progenitor cells. Nature Chemical Biology. PMID 27376691 DOI: 10.1038/Nchembio.2124  0.126
2020 Patt A, Demoret B, Stets C, Bill KL, Smith P, Vijay A, Patterson A, Hays J, Hoang M, Chen JL, Mathé EA. MDM2-Dependent Rewiring of Metabolomic and Lipidomic Profiles in Dedifferentiated Liposarcoma Models. Cancers. 12. PMID 32759684 DOI: 10.3390/Cancers12082157  0.126
2023 Ingham M, Allred JB, Chen L, Das B, Kochupurakkal B, Gano K, George S, Attia S, Burgess MA, Seetharam M, Boikos SA, Bui N, Chen JL, Close JL, Cote GM, et al. Phase II Study of Olaparib and Temozolomide for Advanced Uterine Leiomyosarcoma (NCI Protocol 10250). Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. JCO2300402. PMID 37467452 DOI: 10.1200/JCO.23.00402  0.126
2010 Chen J, Sam L, Huang Y, Lee Y, Li J, Liu Y, Xing HR, Lussier YA. Protein interaction network underpins concordant prognosis among heterogeneous breast cancer signatures. Journal of Biomedical Informatics. 43: 385-96. PMID 20350617 DOI: 10.1016/J.Jbi.2010.03.009  0.125
2013 Chan CK, Lindau P, Jiang W, Chen JY, Zhang LF, Chen CC, Seita J, Sahoo D, Kim JB, Lee A, Park S, Nag D, Gong Y, Kulkarni S, Luppen CA, et al. Clonal precursor of bone, cartilage, and hematopoietic niche stromal cells. Proceedings of the National Academy of Sciences of the United States of America. 110: 12643-8. PMID 23858471 DOI: 10.1073/Pnas.1310212110  0.125
2007 Esengil H, Chang V, Mich JK, Chen JK. Small-molecule regulation of zebrafish gene expression. Nature Chemical Biology. 3: 154-5. PMID 17237798 DOI: 10.1038/Nchembio858  0.124
2018 Ramsey JK, Chen JL, Schoenfield L, Cho RI. Undifferentiated Pleomorphic Sarcoma Metastatic to the Orbit. Ophthalmic Plastic and Reconstructive Surgery. PMID 30289824 DOI: 10.1097/IOP.0000000000001240  0.124
2018 Spaeth-Cook D, Burch M, Belton R, Demoret B, Grosenbacher N, David J, Stets C, Cohen D, Shakya R, Hays JL, Chen JL. Loss of TXNIP enhances peritoneal metastasis and can be abrogated by dual TORC1/2 inhibition. Oncotarget. 9: 35676-35686. PMID 30479697 DOI: 10.18632/Oncotarget.26281  0.124
2019 Bill KLJ, Seligson ND, Hays JL, Awasthi A, Demoret B, Stets CW, Duggan MC, Bupathi M, Brock GN, Millis SZ, Shakya R, Timmers CD, Wakely PE, Pollock RE, Chen JL. Degree of Amplification Affects Clinical Outcomes in Dedifferentiated Liposarcoma. The Oncologist. PMID 31019022 DOI: 10.1634/Theoncologist.2019-0047  0.123
2014 Yamazoe S, McQuade LE, Chen JK. Nitroreductase-activatable morpholino oligonucleotides for in vivo gene silencing. Acs Chemical Biology. 9: 1985-90. PMID 25069083 DOI: 10.1021/Cb500429U  0.123
2014 Mich JK, Payumo AY, Rack PG, Chen JK. In vivo imaging of Hedgehog pathway activation with a nuclear fluorescent reporter. Plos One. 9: e103661. PMID 25068273 DOI: 10.1371/Journal.Pone.0103661  0.123
2015 Chan CK, Seo EY, Chen JY, Lo D, McArdle A, Sinha R, Tevlin R, Seita J, Vincent-Tompkins J, Wearda T, Lu WJ, Senarath-Yapa K, Chung MT, Marecic O, Tran M, et al. Identification and specification of the mouse skeletal stem cell. Cell. 160: 285-98. PMID 25594184 DOI: 10.1016/J.Cell.2014.12.002  0.123
2012 Shestopalov IA, Pitt CL, Chen JK. Spatiotemporal resolution of the Ntla transcriptome in axial mesoderm development. Nature Chemical Biology. 8: 270-6. PMID 22286130 DOI: 10.1038/Nchembio.772  0.122
2020 Rao S, Pitel B, Wagner AH, Boca SM, McCoy M, King I, Gupta S, Park BH, Warner JL, Chen J, Rogan PK, Chakravarty D, Griffith M, Griffith OL, Madhavan S. Collaborative, Multidisciplinary Evaluation of Cancer Variants Through Virtual Molecular Tumor Boards Informs Local Clinical Practices. Jco Clinical Cancer Informatics. 4: 602-613. PMID 32644817 DOI: 10.1200/CCI.19.00169  0.122
2015 Wangaryattawanich P, Hatami M, Wang J, Thomas G, Flanders A, Kirby J, Wintermark M, Huang ES, Bakhtiari AS, Luedi MM, Hashmi SS, Rubin DL, Chen JY, Hwang SN, Freymann J, et al. Multicenter imaging outcomes study of The Cancer Genome Atlas glioblastoma patient cohort: imaging predictors of overall and progression-free survival. Neuro-Oncology. 17: 1525-37. PMID 26203066 DOI: 10.1093/Neuonc/Nov117  0.122
2017 Wong WT, Matrone G, Tian X, Tomoiaga SA, Au KF, Meng S, Yamazoe S, Sieveking D, Chen K, Burns DM, Chen JK, Blau HM, Cooke JP. Discovery of novel determinants of endothelial lineage using chimeric heterokaryons. Elife. 6. PMID 28323620 DOI: 10.7554/Elife.23588  0.121
2018 Chen JC, Perez-Lorenzo R, Saenger YM, Drake CG, Christiano AM. IKZF1 Enhances Immune Infiltrate Recruitment in Solid Tumors and Susceptibility to Immunotherapy. Cell Systems. PMID 29960886 DOI: 10.1016/j.cels.2018.05.020  0.121
2011 Shestopalov IA, Chen JK. Spatiotemporal control of embryonic gene expression using caged morpholinos. Methods in Cell Biology. 104: 151-72. PMID 21924162 DOI: 10.1016/B978-0-12-374814-0.00009-4  0.12
2014 Lee JJ, Perera RM, Wang H, Wu DC, Liu XS, Han S, Fitamant J, Jones PD, Ghanta KS, Kawano S, Nagle JM, Deshpande V, Boucher Y, Kato T, Chen JK, et al. Stromal response to Hedgehog signaling restrains pancreatic cancer progression. Proceedings of the National Academy of Sciences of the United States of America. 111: E3091-100. PMID 25024225 DOI: 10.1073/Pnas.1411679111  0.12
2008 Guo W, Lasky JL, Chang CJ, Mosessian S, Lewis X, Xiao Y, Yeh JE, Chen JY, Iruela-Arispe ML, Varella-Garcia M, Wu H. Multi-genetic events collaboratively contribute to Pten-null leukaemia stem-cell formation. Nature. 453: 529-33. PMID 18463637 DOI: 10.1038/Nature06933  0.12
2024 Bradley J, Xu Q, Touloumes N, Lusciks E, Ali T, Huang EC, Chen J, Ghafghazi S, Arnold FW, Kong M, Huang J, Cavallazzi R. Association of Pulmonary Function Test Abnormalities and Quality-of-Life Measures after COVID-19 Infection. The American Journal of the Medical Sciences. PMID 38636655 DOI: 10.1016/j.amjms.2024.04.010  0.12
2014 Chen HC, Zou W, Lu TP, Chen JJ. A composite model for subgroup identification and prediction via bicluster analysis. Plos One. 9: e111318. PMID 25347824 DOI: 10.1371/journal.pone.0111318  0.119
2016 Chen JY, Miyanishi M, Wang SK, Yamazaki S, Sinha R, Kao KS, Seita J, Sahoo D, Nakauchi H, Weissman IL. Hoxb5 marks long-term haematopoietic stem cells and reveals a homogenous perivascular niche. Nature. 530: 223-7. PMID 26863982 DOI: 10.1038/Nature16943  0.119
2018 Barkal AA, Weiskopf K, Kao KS, Gordon SR, Rosental B, Yiu YY, George BM, Markovic M, Ring NG, Tsai JM, McKenna KM, Ho PY, Cheng RZ, Chen JY, Barkal LJ, et al. Engagement of MHC class I by the inhibitory receptor LILRB1 suppresses macrophages and is a target of cancer immunotherapy. Nature Immunology. 19: 76-84. PMID 29180808 DOI: 10.1038/S41590-017-0004-Z  0.119
2013 Miyanishi M, Mori Y, Seita J, Chen JY, Karten S, Chan CK, Nakauchi H, Weissman IL. Do pluripotent stem cells exist in adult mice as very small embryonic stem cells? Stem Cell Reports. 1: 198-208. PMID 24052953 DOI: 10.1016/J.Stemcr.2013.07.001  0.118
2023 Guzman AJ, Rayos Del Sol S, Dela Rueda T, Jenkins S, Shin C, Haratian R, McGahan P, Chen J. Open Acromioclavicular Repair With a Suture Cerclage Tensioning System: A Case Series. Cureus. 15: e34018. PMID 36811052 DOI: 10.7759/cureus.34018  0.118
2021 Shboul ZA, Diawara N, Vossough A, Chen JY, Iftekharuddin KM. Joint Modeling of RNAseq and Radiomics Data for Glioma Molecular Characterization and Prediction. Frontiers in Medicine. 8: 705071. PMID 34490297 DOI: 10.3389/fmed.2021.705071  0.117
2017 Szade KT, Gulati GS, Chan CKF, Kao KS, Miyanishi M, Marjon K, Sinha R, George B, Chen JY, Weissman I. Where hematopoietic stem cells live - the bone marrow niche. Antioxidants & Redox Signaling. PMID 29113449 DOI: 10.1089/Ars.2017.7419  0.117
2018 Gutzman JH, Graeden E, Brachmann I, Yamazoe S, Chen JK, Sive H. Basal constriction during midbrain-hindbrain boundary morphogenesis is mediated by Wnt5b and focal adhesion kinase. Biology Open. PMID 30305282 DOI: 10.1242/Bio.034520  0.117
2017 Crapster JA, Hudgins L, Chen JK, Gomez-Ospina N. A novel missense variant in the GLI3 zinc finger domain in a family with digital anomalies. American Journal of Medical Genetics. Part A. PMID 28884880 DOI: 10.1002/Ajmg.A.38415  0.115
2022 Seligson ND, Tang J, Jin DX, Bennett MP, Elvin JA, Graim K, Hays JL, Millis SZ, Miles WO, Chen JL. Drivers of genomic loss of heterozygosity in leiomyosarcoma are distinct from carcinomas. Npj Precision Oncology. 6: 29. PMID 35468996 DOI: 10.1038/s41698-022-00271-x  0.115
2012 Cheng GC, Chen DT, Chen JJ, Soong SJ, Lamartiniere C, Barnes S. A chain reaction approach to modelling gene pathways. Translational Cancer Research. 1: 61-73. PMID 22943042 DOI: 10.21037/387  0.114
2005 Akerman GS, Rosenzweig BA, Domon OE, Tsai CA, Bishop ME, McGarrity LJ, Macgregor JT, Sistare FD, Chen JJ, Morris SM. Alterations in gene expression profiles and the DNA-damage response in ionizing radiation-exposed TK6 cells. Environmental and Molecular Mutagenesis. 45: 188-205. PMID 15657912 DOI: 10.1002/em.20091  0.114
2021 Squires MH, Politano S, Pollock RE, Chen JL, Grignol V. Modern multimodality management of patients with caval leiomyosarcoma: New treatment paradigms and potential molecular insights. Journal of Surgical Oncology. PMID 33650695 DOI: 10.1002/jso.26442  0.113
2005 Chen DT, Chen JJ, Soong SJ. Probe rank approaches for gene selection in oligonucleotide arrays with a small number of replicates. Bioinformatics (Oxford, England). 21: 2861-6. PMID 15814562 DOI: 10.1093/bioinformatics/bti413  0.113
2009 Ouyang X, Shestopalov IA, Sinha S, Zheng G, Pitt CL, Li WH, Olson AJ, Chen JK. Versatile synthesis and rational design of caged morpholinos. Journal of the American Chemical Society. 131: 13255-69. PMID 19708646 DOI: 10.1021/Ja809933H  0.112
2009 Yang H, Xiang J, Wang N, Zhao Y, Hyman J, Li S, Jiang J, Chen JK, Yang Z, Lin S. Converse conformational control of smoothened activity by structurally related small molecules. The Journal of Biological Chemistry. 284: 20876-84. PMID 19366682 DOI: 10.1074/Jbc.M807648200  0.112
2009 Yang X, Huang Y, Chen JL, Xie J, Sun X, Lussier YA. Mechanism-anchored profiling derived from epigenetic networks predicts outcome in acute lymphoblastic leukemia. Bmc Bioinformatics. 10: S6. PMID 19761576 DOI: 10.1186/1471-2105-10-S9-S6  0.112
2019 Youn GM, Remigio Van Gogh AM, Alvarez A, Shin Yin SS, Chakrabarti MO, McGahan PJ, Chen JL. Stem Cell-Infused Anterior Cruciate Ligament Reconstruction. Arthroscopy Techniques. 8: e1313-e1317. PMID 31890501 DOI: 10.1016/j.eats.2019.07.006  0.112
2013 Higgins CA, Chen JC, Cerise JE, Jahoda CA, Christiano AM. Microenvironmental reprogramming by three-dimensional culture enables dermal papilla cells to induce de novo human hair-follicle growth. Proceedings of the National Academy of Sciences of the United States of America. 110: 19679-88. PMID 24145441 DOI: 10.1073/Pnas.1309970110  0.112
2021 Chen JC, Dai Z, Christiano AM. Regulatory network analysis defines unique drug mechanisms of action and facilitates patient-drug matching in alopecia areata clinical trials. Computational and Structural Biotechnology Journal. 19: 4751-4758. PMID 34504667 DOI: 10.1016/j.csbj.2021.08.026  0.112
2008 Chen JK, Hurlstone AF. Targeted and Conditional Gene Expression Workshop, 8th International Conference on Zebrafish Development and Genetics. Zebrafish. 5: 193-195. PMID 20798783 DOI: 10.1089/Zeb.2008.0543  0.112
2015 Harel S, Higgins CA, Cerise JE, Dai Z, Chen JC, Clynes R, Christiano AM. Pharmacologic inhibition of JAK-STAT signaling promotes hair growth. Science Advances. 1: e1500973. PMID 26601320 DOI: 10.1126/Sciadv.1500973  0.112
2014 Chen JC, Alvarez MJ, Talos F, Dhruv H, Rieckhof GE, Iyer A, Diefes KL, Aldape K, Berens M, Shen MM, Califano A. Identification of causal genetic drivers of human disease through systems-level analysis of regulatory networks. Cell. 159: 402-14. PMID 25303533 DOI: 10.1016/J.Cell.2014.09.021  0.111
2007 Chen JJ. Key aspects of analyzing microarray gene-expression data Pharmacogenomics. 8: 473-482. PMID 17465711 DOI: 10.2217/14622416.8.5.473  0.111
2022 Jenkins SM, Guzman A, Gardner BB, Bryant SA, Del Sol SR, McGahan P, Chen J. Rehabilitation After Anterior Cruciate Ligament Injury: Review of Current Literature and Recommendations. Current Reviews in Musculoskeletal Medicine. PMID 35381974 DOI: 10.1007/s12178-022-09752-9  0.111
2013 Chen JL, Hsu A, Yang X, Li J, Lee Y, Parinandi G, Li H, Lussier YA. Curation-free biomodules mechanisms in prostate cancer predict recurrent disease. Bmc Medical Genomics. 6: S4. PMID 23819917 DOI: 10.1186/1755-8794-6-S2-S4  0.111
2021 Darrah K, Wesalo J, Lukasak B, Tsang M, Chen JK, Deiters A. Small Molecule Control of Morpholino Antisense Oligonucleotide Function through Staudinger Reduction. Journal of the American Chemical Society. PMID 34705461 DOI: 10.1021/jacs.1c08723  0.111
2008 Shestopalov IA, Chen JK. Chemical technologies for probing embryonic development. Chemical Society Reviews. 37: 1294-307. PMID 18568156 DOI: 10.1039/B703023C  0.111
2022 Feng Z, Hom ME, Bearrood TE, Rosenthal ZC, Fernández D, Ondrus AE, Gu Y, McCormick AK, Tomaske MG, Marshall CR, Kline T, Chen CH, Mochly-Rosen D, Kuo CJ, Chen JK. Targeting colorectal cancer with small-molecule inhibitors of ALDH1B1. Nature Chemical Biology. PMID 35788181 DOI: 10.1038/s41589-022-01048-w  0.111
2006 Shi L, Reid LH, Jones WD, Shippy R, Warrington JA, Baker SC, Collins PJ, de Longueville F, Kawasaki ES, Lee KY, Luo Y, Sun YA, Willey JC, Setterquist RA, ... ... Chen JJ, et al. The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements. Nature Biotechnology. 24: 1151-61. PMID 16964229 DOI: 10.1038/Nbt1239  0.111
2005 Tsai CA, Chen JJ. Significance analysis of ROC indices for comparing diagnostic markers: applications to gene microarray data. Journal of Biopharmaceutical Statistics. 14: 985-1003. PMID 15587976 DOI: 10.1081/BIP-200035475  0.11
2004 Liou JS, Chen JS, Faller DV. Characterization of p21Ras-mediated apoptosis induced by protein kinase C inhibition and application to human tumor cell lines. Journal of Cellular Physiology. 198: 277-94. PMID 14603530 DOI: 10.1002/Jcp.10409  0.11
2010 Siu IM, Tyler BM, Chen JX, Eberhart CG, Thomale UW, Olivi A, Jallo GI, Riggins GJ, Gallia GL. Establishment of a human glioblastoma stemlike brainstem rodent tumor model. Journal of Neurosurgery. Pediatrics. 6: 92-7. PMID 20593994 DOI: 10.3171/2010.3.Peds09366  0.11
2019 Demoret B, Gregg J, Liebner DA, Tinoco G, Lenobel S, Chen JL. Prospective Evaluation of the Concordance of Commercial Circulating Tumor DNA Alterations with Tumor-Based Sequencing across Multiple Soft Tissue Sarcoma Subtypes. Cancers. 11. PMID 31766329 DOI: 10.3390/cancers11121829  0.11
2022 Hsu JY, Seligson ND, Hays JL, Miles WO, Chen JL. Clinical Utility of CDK4/6 Inhibitors in Sarcoma: Successes and Future Challenges. Jco Precision Oncology. 6: e2100211. PMID 35108033 DOI: 10.1200/PO.21.00211  0.11
2003 Marcotte R, Qian JF, Chen J, Wang E. hMad4, c-Myc endogenous inhibitor, induces a replicative senescence-like state when overexpressed in human fibroblasts. Journal of Cellular Biochemistry. 89: 576-88. PMID 12761891 DOI: 10.1002/Jcb.10517  0.11
2021 Nishi K, Sakamaki T, Sadaoka K, Fujii M, Takaori-Kondo A, Chen JY, Miyanishi M. Identification of the minimum requirements for successful haematopoietic stem cell transplantation. British Journal of Haematology. PMID 34927242 DOI: 10.1111/bjh.17867  0.109
2015 Feng M, Chen JY, Weissman-Tsukamoto R, Volkmer JP, Ho PY, McKenna KM, Cheshier S, Zhang M, Guo N, Gip P, Mitra SS, Weissman IL. Macrophages eat cancer cells using their own calreticulin as a guide: roles of TLR and Btk. Proceedings of the National Academy of Sciences of the United States of America. 112: 2145-50. PMID 25646432 DOI: 10.1073/Pnas.1424907112  0.109
2017 Bupathi M, Hays JL, Chen JL. Temozolomide post pazopanib treatment failure in patients with advanced sarcoma: A case series. Plos One. 12: e0188116. PMID 29141017 DOI: 10.1371/journal.pone.0188116  0.109
2015 Cheah MT, Chen JY, Sahoo D, Contreras-Trujillo H, Volkmer AK, Scheeren FA, Volkmer JP, Weissman IL. CD14-expressing cancer cells establish the inflammatory and proliferative tumor microenvironment in bladder cancer. Proceedings of the National Academy of Sciences of the United States of America. 112: 4725-30. PMID 25825750 DOI: 10.1073/Pnas.1424795112  0.109
2014 Rack PG, Ni J, Payumo AY, Nguyen V, Crapster JA, Hovestadt V, Kool M, Jones DT, Mich JK, Firestone AJ, Pfister SM, Cho YJ, Chen JK. Arhgap36-dependent activation of Gli transcription factors. Proceedings of the National Academy of Sciences of the United States of America. 111: 11061-6. PMID 25024229 DOI: 10.1073/Pnas.1322362111  0.109
2006 Sinha S, Chen JK. Purmorphamine activates the Hedgehog pathway by targeting Smoothened. Nature Chemical Biology. 2: 29-30. PMID 16408088 DOI: 10.1038/Nchembio753  0.108
2018 Abaci HE, Coffman A, Doucet Y, Chen J, Jacków J, Wang E, Guo Z, Shin JU, Jahoda CA, Christiano AM. Tissue engineering of human hair follicles using a biomimetic developmental approach. Nature Communications. 9: 5301. PMID 30546011 DOI: 10.1038/S41467-018-07579-Y  0.108
2007 Moon H, Ahn H, Kodell RL, Baek S, Lin CJ, Chen JJ. Ensemble methods for classification of patients for personalized medicine with high-dimensional data. Artificial Intelligence in Medicine. 41: 197-207. PMID 17719213 DOI: 10.1016/J.Artmed.2007.07.003  0.108
2003 Lustig RA, Vogl TJ, Fromm D, Cuenca R, Alex Hsi R, D'Cruz AK, Krajina Z, Turić M, Singhal A, Chen JC. A multicenter Phase I safety study of intratumoral photoactivation of talaporfin sodium in patients with refractory solid tumors. Cancer. 98: 1767-71. PMID 14534895 DOI: 10.1002/cncr.11708  0.107
2016 Lee JJ, Rothenberg ME, Seeley ES, Zimdahl B, Kawano S, Lu WJ, Shin K, Sakata-Kato T, Chen JK, Diehn M, Clarke MF, Beachy PA. Control of inflammation by stromal Hedgehog pathway activation restrains colitis. Proceedings of the National Academy of Sciences of the United States of America. PMID 27815529 DOI: 10.1073/Pnas.1616447113  0.107
2011 Guo W, Schubbert S, Chen JY, Valamehr B, Mosessian S, Shi H, Dang NH, Garcia C, Theodoro MF, Varella-Garcia M, Wu H. Suppression of leukemia development caused by PTEN loss. Proceedings of the National Academy of Sciences of the United States of America. 108: 1409-14. PMID 21212363 DOI: 10.1073/Pnas.1006937108  0.107
2016 Chen YC, Chen JJ. Ensemble survival trees for identifying subpopulations in personalized medicine. Biometrical Journal. Biometrische Zeitschrift. PMID 27073016 DOI: 10.1002/bimj.201500075  0.107
2017 Kowalik L, Chen JK. Illuminating developmental biology through photochemistry. Nature Chemical Biology. 13: 587-598. PMID 28514427 DOI: 10.1038/Nchembio.2369  0.107
2018 Monette P, Brach R, Cowan A, Winters R, Weisman J, Seybert F, Goguen K, Chen J, Glasfeld A, Spatafora G. Autoregulation of the SloR metalloregulator is constitutive and driven by an independent promoter. Journal of Bacteriology. PMID 29735764 DOI: 10.1128/Jb.00214-18  0.106
2016 Miller ED, Mo X, Andonian NT, Haglund KE, Martin DD, Liebner DA, Chen JL, Iwenofu OH, Chakravarti A, Scharschmidt TJ, Mayerson JL, Pollock RE, Xu-Welliver M. Patterns of major wound complications following multidisciplinary therapy for lower extremity soft tissue sarcoma. Journal of Surgical Oncology. PMID 27238092 DOI: 10.1002/jso.24313  0.106
2004 Delongchamp RR, Bowyer JF, Chen JJ, Kodell RL. Multiple-testing strategy for analyzing cDNA array data on gene expression. Biometrics. 60: 774-82. PMID 15339301 DOI: 10.1111/J.0006-341X.2004.00228.X  0.106
2007 Chen JJ, Hsueh HM, Delongchamp RR, Lin CJ, Tsai CA. Reproducibility of microarray data: a further analysis of microarray quality control (MAQC) data. Bmc Bioinformatics. 8: 412. PMID 17961233 DOI: 10.1186/1471-2105-8-412  0.106
2011 Spencer VA, Costes S, Inman JL, Xu R, Chen J, Hendzel MJ, Bissell MJ. Depletion of nuclear actin is a key mediator of quiescence in epithelial cells. Journal of Cell Science. 124: 123-32. PMID 21172822 DOI: 10.1242/Jcs.073197  0.106
2007 Chen DT, Chen JJ, Cheng G, Lin SH, Soong SJ. A two-stage binomial test approach of gene identification in oligonucleotide arrays Journal of Biopharmaceutical Statistics. 17: 903-918. PMID 17885873 DOI: 10.1080/10543400701514064  0.106
2015 Mruk K, Chen JK. Thinking big with small molecules. The Journal of Cell Biology. 209: 7-9. PMID 25869661 DOI: 10.1083/Jcb.201501084  0.106
2008 Baek S, Moon H, Ahn H, Kodell RL, Lin CJ, Chen JJ. Identifying high-dimensional biomarkers for personalized medicine via variable importance ranking. Journal of Biopharmaceutical Statistics. 18: 853-68. PMID 18781521 DOI: 10.1080/10543400802278023  0.106
2017 Chen JY, Sippel Schmidt TM, Carr CD, Kahn CE. Enabling the Next-Generation Radiology Report: Description of Two New System Standards. Radiographics : a Review Publication of the Radiological Society of North America, Inc. 160106. PMID 28968194 DOI: 10.1148/rg.2017160106  0.106
2011 Heine VM, Griveau A, Chapin C, Ballard PL, Chen JK, Rowitch DH. A small-molecule smoothened agonist prevents glucocorticoid-induced neonatal cerebellar injury. Science Translational Medicine. 3: 105ra104. PMID 22013124 DOI: 10.1126/Scitranslmed.3002731  0.105
2004 Young J, Tong W, Fang H, Xie Q, Pearce B, Hashemi R, Beger R, Cheeseman M, Chen J, Chang YC, Kodell R. Building an organ-specific carcinogenic database for SAR analyses. Journal of Toxicology and Environmental Health. Part A. 67: 1363-89. PMID 15371237 DOI: 10.1080/15287390490471479  0.105
2019 Pattanayak S, Vázquez-Maldonado LA, Deiters A, Chen JK. Combinatorial control of gene function with wavelength-selective caged morpholinos. Methods in Enzymology. 624: 69-88. PMID 31370936 DOI: 10.1016/Bs.Mie.2019.04.007  0.105
2019 Seligson ND, Awasthi A, Millis SZ, Turpin BK, Meyer CF, Grand'Maison A, Liebner DA, Hays JL, Chen JL. Common Secondary Genomic Variants Associated With Advanced Epithelioid Hemangioendothelioma. Jama Network Open. 2: e1912416. PMID 31577358 DOI: 10.1001/jamanetworkopen.2019.12416  0.105
2013 Chen JL, Appelbaum DE, Kocherginsky M, Cowey CL, Rathmell WK, McDermott DF, Stadler WM. FDG-PET as a predictive biomarker for therapy with everolimus in metastatic renal cell cancer. Cancer Medicine. 2: 545-52. PMID 24156027 DOI: 10.1002/cam4.102  0.105
2005 Tsai CA, Chen CH, Lee TC, Ho IC, Yang UC, Chen JJ. Gene selection for sample classifications in microarray experiments. Dna and Cell Biology. 23: 607-14. PMID 15585118 DOI: 10.1089/dna.2004.23.607  0.105
2022 Le T, Liu H, Jenkins SM, Rayos Del Sol S, Gardner BB, McGahan P, Chen J. Single Knotless Suture Anchor Repair of Anterior Talofibular Ligament Following Distal Fibula Nonunion Excision. Arthroscopy Techniques. 11: e449-e455. PMID 35256990 DOI: 10.1016/j.eats.2021.11.015  0.104
2021 Sakamaki T, Kao KS, Nishi K, Chen JY, Sadaoka K, Fujii M, Takaori-Kondo A, Weissman IL, Miyanishi M. Hoxb5 defines the heterogeneity of self-renewal capacity in the hematopoietic stem cell compartment. Biochemical and Biophysical Research Communications. 539: 34-41. PMID 33418191 DOI: 10.1016/j.bbrc.2020.12.077  0.104
2012 Yamazoe S, Shestopalov IA, Provost E, Leach SD, Chen JK. Cyclic caged morpholinos: conformationally gated probes of embryonic gene function. Angewandte Chemie (International Ed. in English). 51: 6908-11. PMID 22689470 DOI: 10.1002/Anie.201201690  0.104
2008 Chen DT, Schell MJ, Chen JJ, Fulp WJ, Eschrich S, Yeatman T. A predictive risk probability approach for microarray data with survival as an endpoint. Journal of Biopharmaceutical Statistics. 18: 841-52. PMID 18781520 DOI: 10.1080/10543400802277967  0.104
2022 Guzman AJ, Fong S, Jenkins S, Dela Rueda T, Talwar C, McGahan P, Chen J. Single-Portal Arthroscopic Posterior Capsulorrhaphy for Recurrent Shoulder Capsule Laxity and Instability. Arthroscopy Techniques. 11: e1583-e1588. PMID 36185119 DOI: 10.1016/j.eats.2022.05.004  0.104
2010 Lim N, Ahn H, Moon H, Chen JJ. Classification of high-dimensional data with ensemble of logistic regression models. Journal of Biopharmaceutical Statistics. 20: 160-71. PMID 20077255 DOI: 10.1080/10543400903280639  0.103
2020 van Gogh AM, Li X, Youn GM, Alvarez A, Yin S, Chakrabarti MO, McGahan PJ, Chen JL. Arthroscopic Harvesting of Autologous Bone Graft for Use as a Mesenchymal Stem Cell Carrier in Anterior Cruciate Ligament Reconstruction. Arthroscopy Techniques. 9: e45-e50. PMID 32021773 DOI: 10.1016/j.eats.2019.08.018  0.103
2023 Husain M, Quiroga D, Kim HG, Lenobel S, Xu M, Iwenofu H, Chen JL, Verschraegen C, Liebner D, Tinoco G. Clinical markers of immunotherapy outcomes in advanced sarcoma. Bmc Cancer. 23: 326. PMID 37029351 DOI: 10.1186/s12885-023-10758-w  0.103
2002 Chen JK, Taipale J, Young KE, Maiti T, Beachy PA. Small molecule modulation of Smoothened activity. Proceedings of the National Academy of Sciences of the United States of America. 99: 14071-6. PMID 12391318 DOI: 10.1073/Pnas.182542899  0.103
2013 Lu TP, Chuang EY, Chen JJ. Identification of reproducible gene expression signatures in lung adenocarcinoma. Bmc Bioinformatics. 14: 371. PMID 24369726 DOI: 10.1186/1471-2105-14-371  0.103
2017 Hughes KS, Ambinder EP, Hess GP, Yu PP, Bernstam EV, Routbort MJ, Clemenceau JR, Hamm JT, Febbo PG, Domchek SM, Chen JL, Warner JL. Identifying Health Information Technology Needs of Oncologists to Facilitate the Adoption of Genomic Medicine: Recommendations From the 2016 American Society of Clinical Oncology Omics and Precision Oncology Workshop. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. JCO2017741744. PMID 28737972 DOI: 10.1200/Jco.2017.74.1744  0.103
2018 Elena N, Woodall BM, Lee K, McGahan PJ, Pathare NP, Shin EC, Chen JL. Intraosseous Bioplasty for a Chondral Cyst in the Lateral Tibial Plateau. Arthroscopy Techniques. 7: e1149-e1156. PMID 30533362 DOI: 10.1016/j.eats.2018.07.011  0.103
2002 Tang MS, Pfeifer GP, Denissenko MF, Feng Z, Hu W, Pao A, Zheng Y, Zheng JB, Li H, Chen JX. Mapping polycyclic aromatic hydrocarbon and aromatic amine-induced DNA damage in cancer-related genes at the sequence level. International Journal of Hygiene and Environmental Health. 205: 103-13. PMID 12018002 DOI: 10.1078/1438-4639-00135  0.103
2009 Mich JK, Blaser H, Thomas NA, Firestone AJ, Yelon D, Raz E, Chen JK. Germ cell migration in zebrafish is cyclopamine-sensitive but Smoothened-independent. Developmental Biology. 328: 342-54. PMID 19389352 DOI: 10.1016/J.Ydbio.2009.01.036  0.102
2019 Rosinski A, Chakrabarti M, Gwosdz J, McGahan PJ, Chen JL. Double-Bundle Medial Patellofemoral Ligament Reconstruction With Allograft. Arthroscopy Techniques. 8: e513-e520. PMID 31194129 DOI: 10.1016/j.eats.2019.01.011  0.102
2023 Guzman A, Williams N, Francisco R, Reed L, Cheng SJ, Waldron P, Vallelanes E, McGahan P, Chen JL. Tommy John Ligament Repair with Ulnar Collateral Ligament Internal Brace. Arthroscopy Techniques. 13: 102830. PMID 38312867 DOI: 10.1016/j.eats.2023.09.006  0.102
2005 Tsai CA, Hsueh HM, Chen JJ. A generalized additive model for microarray gene expression data analysis. Journal of Biopharmaceutical Statistics. 14: 553-73. PMID 15468752 DOI: 10.1081/BIP-200025648  0.102
2011 Park KS, Martelotto LG, Peifer M, Sos ML, Karnezis AN, Mahjoub MR, Bernard K, Conklin JF, Szczepny A, Yuan J, Guo R, Ospina B, Falzon J, Bennett S, Brown TJ, ... ... Chen JK, et al. A crucial requirement for Hedgehog signaling in small cell lung cancer. Nature Medicine. 17: 1504-8. PMID 21983857 DOI: 10.1038/Nm.2473  0.102
2016 Jabbari A, Cerise JE, Chen JC, Mackay-Wiggan J, Duvic M, Price V, Hordinsky M, Norris D, Clynes R, Christiano AM. Molecular signatures define alopecia areata subtypes and transcriptional biomarkers. Ebiomedicine. 7: 240-247. PMID 27322477 DOI: 10.1016/J.Ebiom.2016.03.036  0.102
2011 Sakata T, Chen JK. Chemical 'Jekyll and Hyde's: small-molecule inhibitors of developmental signaling pathways. Chemical Society Reviews. 40: 4318-31. PMID 21505654 DOI: 10.1039/C1Cs15019G  0.101
2015 Lu TP, Chen JJ. Identification of drug-induced toxicity biomarkers for treatment determination. Pharmaceutical Statistics. 14: 284-93. PMID 25914330 DOI: 10.1002/pst.1684  0.101
2016 Chen JX, Sudheendra D, Stavropoulos SW, Nadolski GJ. Role of Catheter-directed Thrombolysis in Management of Iliofemoral Deep Venous Thrombosis. Radiographics : a Review Publication of the Radiological Society of North America, Inc. 36: 1565-1575. PMID 27618329 DOI: 10.1148/rg.2016150138  0.101
2008 Cihlar T, Ray AS, Boojamra CG, Zhang L, Hui H, Laflamme G, Vela JE, Grant D, Chen J, Myrick F, White KL, Gao Y, Lin KY, Douglas JL, Parkin NT, et al. Design and profiling of GS-9148, a novel nucleotide analog active against nucleoside-resistant variants of human immunodeficiency virus type 1, and its orally bioavailable phosphonoamidate prodrug, GS-9131. Antimicrobial Agents and Chemotherapy. 52: 655-65. PMID 18056282 DOI: 10.1128/Aac.01215-07  0.101
2009 Cupido T, Rack PG, Firestone AJ, Hyman JM, Han K, Sinha S, Ocasio CA, Chen JK. The imidazopyridine derivative JK184 reveals dual roles for microtubules in Hedgehog signaling. Angewandte Chemie (International Ed. in English). 48: 2321-4. PMID 19222062 DOI: 10.1002/Anie.200805666  0.101
2021 Dai Z, Chen J, Chang Y, Christiano AM. Selective inhibition of JAK3 signaling is sufficient to reverse alopecia areata. Jci Insight. 6. PMID 33830087 DOI: 10.1172/jci.insight.142205  0.1
2007 Shestopalov IA, Sinha S, Chen JK. Light-controlled gene silencing in zebrafish embryos. Nature Chemical Biology. 3: 650-1. PMID 17717538 DOI: 10.1038/Nchembio.2007.30  0.1
2015 Lu TP, Chen JJ. Subgroup identification for treatment selection in biomarker adaptive design. Bmc Medical Research Methodology. 15: 105. PMID 26646831 DOI: 10.1186/s12874-015-0098-7  0.1
2018 Mathé E, Hays JL, Stover DG, Chen JL. The Omics Revolution Continues: The Maturation of High-Throughput Biological Data Sources. Yearbook of Medical Informatics. 27: 211-222. PMID 30157526 DOI: 10.1055/S-0038-1667085  0.1
2012 Petibone DM, Kulkarni RM, Chang CW, Chen JJ, Morris SM. Evaluation of p53 genotype on gene expression in the testis, liver, and heart from male C57BL/6 mice. Transgenic Research. 21: 257-63. PMID 21656205 DOI: 10.1007/s11248-011-9526-6  0.099
2013 Chen JJ, Lin WJ, Chen HC. Pharmacogenomic biomarkers for personalized medicine. Pharmacogenomics. 14: 969-80. PMID 23746190 DOI: 10.2217/pgs.13.75  0.099
2014 Chien CY, Chang CW, Tsai CA, Chen JJ. MAVTgsa: an R package for gene set (enrichment) analysis. Biomed Research International. 2014: 346074. PMID 25101274 DOI: 10.1155/2014/346074  0.099
2010 Ouyang X, Chen JK. Synthetic strategies for studying embryonic development. Chemistry & Biology. 17: 590-606. PMID 20609409 DOI: 10.1016/J.Chembiol.2010.04.013  0.099
2020 Hay MA, Severson EA, Miller VA, Liebner DA, Vergilio JA, Millis SZ, Chen JL. Identifying Opportunities and Challenges for Patients With Sarcoma as a Result of Comprehensive Genomic Profiling of Sarcoma Specimens. Jco Precision Oncology. 4. PMID 32923870 DOI: 10.1200/PO.19.00227  0.098
2020 Chen J, Chiu C, Gopalkrishnan S, Chen AY, Olinares PDB, Saecker RM, Winkelman JT, Maloney MF, Chait BT, Ross W, Gourse RL, Campbell EA, Darst SA. Stepwise Promoter Melting by Bacterial RNA Polymerase. Molecular Cell. PMID 32160514 DOI: 10.1016/J.Molcel.2020.02.017  0.098
2008 Low WC, Wang C, Pan Y, Huang XY, Chen JK, Wang B. The decoupling of Smoothened from Galphai proteins has little effect on Gli3 protein processing and Hedgehog-regulated chick neural tube patterning. Developmental Biology. 321: 188-96. PMID 18590719 DOI: 10.1016/J.Ydbio.2008.06.014  0.098
2017 Steinman JB, Santarossa CC, Miller RM, Yu LS, Serpinskaya AS, Furukawa H, Morimoto S, Tanaka Y, Nishitani M, Asano M, Zalyte R, Ondrus AE, Johnson AG, Ye F, Nachury MV, ... Chen JK, et al. Chemical structure-guided design of dynapyrazoles, potent cell-permeable dynein inhibitors with a unique mode of action. Elife. 6. PMID 28524820 DOI: 10.7554/Elife.25174  0.098
2021 Morrissey SM, Geller AE, Hu X, Tieri D, Ding C, Klaes CK, Cooke EA, Woeste MR, Martin ZC, Chen O, Bush SE, Zhang HG, Cavallazzi R, Clifford SP, Chen J, et al. A specific low-density neutrophil population correlates with hypercoagulation and disease severity in hospitalized COVID-19 patients. Jci Insight. 6. PMID 33986193 DOI: 10.1172/jci.insight.148435  0.098
2018 Chen YC, Lee UJ, Tsai CA, Chen JJ. Development of predictive signatures for treatment selection in precision medicine with survival outcomes. Pharmaceutical Statistics. PMID 29297979 DOI: 10.1002/pst.1842  0.098
2021 Kim JY, Park HY, Del Sol SR, Bryant S, Gardner B, Chakrabarti MO, Perinovic S, McGahan PJ, Chen JL. Arthroscopic Single Portal, Single Anchor Knotless Subscapularis Repair with Concomitant Tenodesis of the Long Head of the Biceps Tendon. Arthroscopy Techniques. 10: e1117-e1123. PMID 33981559 DOI: 10.1016/j.eats.2021.01.002  0.098
2019 Pisano SG, Hoffman SE, Legasto CS, McLaughlin EM, Porter K, Chen JL. Effect of Acid-Suppressive Strategies on Pazopanib Efficacy in Patients With Soft-Tissue Sarcoma. Clinical and Translational Science. PMID 31264782 DOI: 10.1111/cts.12648  0.097
2012 Morris SM, Petibone DM, Lin WJ, Chen JJ, Vitiello B, Witt KL, Mattison DR. The genetic toxicity of methylphenidate: a review of the current literature. Journal of Applied Toxicology : Jat. 32: 756-64. PMID 22337063 DOI: 10.1002/jat.2721  0.097
2021 Kang S, Wilkinson KJ, Brungs D, Chua W, Ng W, Chen J, Nasser E, Lee M, Wong K, Bokey L, Winn R, Putnis S, Lee CS, Lim SH. Rectal cancer treatment and outcomes in elderly patients treated with curative intent. Molecular and Clinical Oncology. 15: 256. PMID 34712486 DOI: 10.3892/mco.2021.2418  0.097
2018 Choy E, Ballman K, Chen J, Dickson MA, Chugh R, George S, Okuno S, Pollock R, Patel RM, Hoering A, Patel S. SARC018_SPORE02: Phase II Study of Mocetinostat Administered with Gemcitabine for Patients with Metastatic Leiomyosarcoma with Progression or Relapse following Prior Treatment with Gemcitabine-Containing Therapy. Sarcoma. 2018: 2068517. PMID 30473623 DOI: 10.1155/2018/2068517  0.097
2019 Cross NM, Wildenberg J, Liao G, Novak S, Bevilacqua T, Chen J, Siegelman E, Cook TS. The voice of the radiologist: Enabling patients to speak directly to radiologists. Clinical Imaging. 61: 84-89. PMID 31986355 DOI: 10.1016/J.Clinimag.2019.09.014  0.097
2015 Chen JC, Cerise JE, Jabbari A, Clynes R, Christiano AM. Master regulators of infiltrate recruitment in autoimmune disease identified through network-based molecular deconvolution. Cell Systems. 1: 326-337. PMID 26665180 DOI: 10.1016/J.Cels.2015.11.001  0.096
2015 Chen JJ, Lu TP, Chen YC, Lin WJ. Predictive biomarkers for treatment selection: statistical considerations. Biomarkers in Medicine. PMID 26507127 DOI: 10.2217/bmm.15.84  0.096
2016 Ahn DH, Javle M, Ahn CW, Jain A, Mikhail S, Noonan AM, Wu C, Shroff RT, Chen JL, Bekaii-Saab T. Next-generation sequencing survey of biliary tract cancer reveals the association between tumor somatic variants and chemotherapy resistance. Cancer. PMID 27495988 DOI: 10.1002/cncr.30247  0.096
2015 Zhao W, Chen JJ, Perkins R, Liu Z, Ge W, Ding Y, Zou W. A heuristic approach to determine an appropriate number of topics in topic modeling. Bmc Bioinformatics. 16: S8. PMID 26424364 DOI: 10.1186/1471-2105-16-S13-S8  0.096
2018 Elena N, Woodall BM, Mac Hale WP, McGahan PJ, Pathare NP, Shin EC, Chen JL. Single Portal Technique for Subscapularis Tendon Repair. Arthroscopy Techniques. 7: e645-e649. PMID 29955570 DOI: 10.1016/j.eats.2018.02.014  0.096
2018 Breslow DK, Hoogendoorn S, Kopp AR, Morgens DW, Vu BK, Kennedy MC, Han K, Li A, Hess GT, Bassik MC, Chen JK, Nachury MV. A CRISPR-based screen for Hedgehog signaling provides insights into ciliary function and ciliopathies. Nature Genetics. PMID 29459677 DOI: 10.1038/S41588-018-0054-7  0.096
2023 Gill JL, Schneiders JA, Stangl M, Aghajan ZM, Vallejo M, Hiller S, Topalovic U, Inman CS, Villaroman D, Bari A, Adhikari A, Rao VR, Fanselow MS, Craske MG, Krahl SE, ... Chen JWY, et al. A pilot study of closed-loop neuromodulation for treatment-resistant post-traumatic stress disorder. Nature Communications. 14: 2997. PMID 37225710 DOI: 10.1038/s41467-023-38712-1  0.096
2020 Seligson ND, Warner JL, Dalton WS, Martin D, Miller RS, Patt D, Kehl KL, Palchuk MB, Alterovitz G, Wiley LK, Huang M, Shen F, Wang Y, Nguyen KA, Wong AF, ... ... Chen JL, et al. Recommendations for patient similarity classes: results of the AMIA 2019 workshop on defining patient similarity. Journal of the American Medical Informatics Association : Jamia. PMID 32885823 DOI: 10.1093/Jamia/Ocaa159  0.095
2011 Lin WJ, Chen JJ. Biomarker classifiers for identifying susceptible subpopulations for treatment decisions. Pharmacogenomics. 13: 147-57. PMID 22188363 DOI: 10.2217/pgs.11.139  0.095
2015 See SK, Hoogendoorn S, Chung AH, Ye F, Steinman JB, Sakata-Kato T, Miller RM, Cupido T, Zalyte R, Carter AP, Nachury MV, Kapoor TM, Chen JK. Cytoplasmic Dynein Antagonists with Improved Potency and Isoform Selectivity. Acs Chemical Biology. PMID 26555042 DOI: 10.1021/Acschembio.5B00895  0.095
2020 Lilic M, Chen J, Boyaci H, Braffman N, Hubin EA, Herrmann J, Müller R, Mooney R, Landick R, Darst SA, Campbell EA. The antibiotic sorangicin A inhibits promoter DNA unwinding in a rifampicin-resistant RNA polymerase. Proceedings of the National Academy of Sciences of the United States of America. PMID 33199626 DOI: 10.1073/pnas.2013706117  0.095
2023 Alexander LT, Durairaj J, Kryshtafovych A, Abriata LA, Bayo Y, Bhabha G, Breyton C, Caulton SG, Chen J, Degroux S, Ekiert DC, Erlandsen BS, Freddolino PL, Gilzer D, Greening C, et al. Protein target highlights in CASP15: Analysis of models by structure providers. Proteins. PMID 37493353 DOI: 10.1002/prot.26545  0.094
2011 Groesser T, Chang H, Fontenay G, Chen J, Costes SV, Barcellos-Hoff MH, Parvin B, Rydberg B. Persistence of γ-H2AX and 53BP1 foci in proliferating and non-proliferating human mammary epithelial cells after exposure to γ-rays or iron ions. International Journal of Radiation Biology. 87: 696-710. PMID 21271785 DOI: 10.3109/09553002.2010.549535  0.094
2016 ElNaggar AC, Hays JL, Chen JL. Addition of Everolimus Post VEGFR Inhibition Treatment Failure in Advanced Sarcoma Patients Who Previously Benefited from VEGFR Inhibition: A Case Series. Plos One. 11: e0156985. PMID 27295141 DOI: 10.1371/journal.pone.0156985  0.094
2022 Shin C, Jenkins S, Haratian A, Reed L, Talwar C, McGahan P, Chen J. Double-Row Rotator Cuff Repair Technique With Dermal Allograft Augmentation. Arthroscopy Techniques. 11: e2161-e2167. PMID 36632406 DOI: 10.1016/j.eats.2022.08.017  0.094
2023 Nelde A, Schuster H, Heitmann JS, Bauer J, Maringer Y, Zwick M, Volkmer JP, Chen JY, Stanger AMP, Lehmann A, Appiah B, Märklin M, Rücker-Braun E, Salih HR, Roerden M, et al. Immune Surveillance of Acute Myeloid Leukemia Is Mediated by HLA-Presented Antigens on Leukemia Progenitor Cells. Blood Cancer Discovery. OF1-OF22. PMID 37847741 DOI: 10.1158/2643-3230.BCD-23-0020  0.094
2021 Kim JY, Bryant S, Gardner B, Park HY, Tse W, Chakrabarti M, McGahan P, Chen JL. Distal Clavicle Excision for Acromioclavicular Joint Osteoarthritis Using a Fluoroscopic Kirschner Wire Guide. Arthroscopy Techniques. 10: e359-e365. PMID 33680767 DOI: 10.1016/j.eats.2020.10.010  0.094
2013 Chen HC, Zou W, Tien YJ, Chen JJ. Identification of bicluster regions in a binary matrix and its applications. Plos One. 8: e71680. PMID 23940779 DOI: 10.1371/journal.pone.0071680  0.093
2011 Kathuria S, Chen J, Gregg L, Parmar HA, Gandhi D. Congenital arterial and venous anomalies of the brain and skull base. Neuroimaging Clinics of North America. 21: 545-62, vii. PMID 21807311 DOI: 10.1016/j.nic.2011.05.002  0.093
2016 Chen JX, Maass D, Guzzo TJ, Bruce Malkowicz S, Wein AJ, Soulen MC, Clark TW, Nadolski GJ, William Stavropoulos S. Tumor Growth Kinetics and Oncologic Outcomes of Patients Undergoing Active Surveillance for Residual Renal Tumor following Percutaneous Thermal Ablation. Journal of Vascular and Interventional Radiology : Jvir. PMID 27234485 DOI: 10.1016/j.jvir.2016.03.038  0.093
2005 Wang SJ, Chen JJ. Sample size for identifying differentially expressed genes in microarray experiments. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 11: 714-26. PMID 15579240 DOI: 10.1089/cmb.2004.11.714  0.093
2018 Brown BL, Vieux EF, Kalastavadi T, Kim S, Chen JZ, Baker TA. N domain of the Lon AAA+ protease controls assembly and substrate choice. Protein Science : a Publication of the Protein Society. PMID 30461098 DOI: 10.1002/Pro.3553  0.093
2015 Huntington JT, Jones C, Liebner DA, Chen JL, Pollock RE. Angiosarcoma: A rare malignancy with protean clinical presentations. Journal of Surgical Oncology. 111: 941-50. PMID 26031299 DOI: 10.1002/Jso.23918  0.093
2011 Hillman RT, Feng BY, Ni J, Woo WM, Milenkovic L, Hayden Gephart MG, Teruel MN, Oro AE, Chen JK, Scott MP. Neuropilins are positive regulators of Hedgehog signal transduction. Genes & Development. 25: 2333-46. PMID 22051878 DOI: 10.1101/Gad.173054.111  0.093
2007 Chen JL, Liu Y, Sam LT, Li J, Lussier YA. Evaluation of high-throughput functional categorization of human disease genes. Bmc Bioinformatics. 8: S7. PMID 17493290 DOI: 10.1186/1471-2105-8-S3-S7  0.092
2018 Boyaci H, Chen J, Lilic M, Palka M, Mooney RA, Landick R, Darst SA, Campbell EA. Fidaxomicin jamsRNA polymerase motions needed for initiation via RbpA contacts. Elife. 7. PMID 29480804 DOI: 10.7554/eLife.34823  0.092
2019 Thomas WC, Brooks FP, Burnim AA, Bacik JP, Stubbe J, Kaelber JT, Chen JZ, Ando N. Convergent allostery in ribonucleotide reductase. Nature Communications. 10: 2653. PMID 31201319 DOI: 10.1038/S41467-019-10568-4  0.092
2014 Yamazoe S, Liu Q, McQuade LE, Deiters A, Chen JK. Sequential gene silencing using wavelength-selective caged morpholino oligonucleotides. Angewandte Chemie (International Ed. in English). 53: 10114-8. PMID 25130695 DOI: 10.1002/Anie.201405355  0.092
2014 Koek RJ, Langevin JP, Krahl SE, Kosoyan HJ, Schwartz HN, Chen JW, Melrose R, Mandelkern MJ, Sultzer D. Deep brain stimulation of the basolateral amygdala for treatment-refractory combat post-traumatic stress disorder (PTSD): study protocol for a pilot randomized controlled trial with blinded, staggered onset of stimulation. Trials. 15: 356. PMID 25208824 DOI: 10.1186/1745-6215-15-356  0.092
2016 Chen JC, Christiano AM. Out of Many, One: Computational Reconstruction of Mouse Skin using Single-Cell Transcriptomics. Cell Stem Cell. 19: 421-422. PMID 27716520 DOI: 10.1016/J.Stem.2016.09.009  0.092
2023 Eljilany I, Saghand PG, Chen J, Ratan A, McCarter M, Carpten J, Colman H, Ikeguchi AP, Puzanov I, Arnold S, Churchman M, Hwu P, Conejo-Garcia J, Dalton WS, Weiner GJ, et al. The T Cell Immunoscore as a Reference for Biomarker Development Utilizing Real-World Data from Patients with Advanced Malignancies Treated with Immune Checkpoint Inhibitors. Cancers. 15. PMID 37894280 DOI: 10.3390/cancers15204913  0.091
2022 Pattanayak S, Sarode BR, Deiters A, Chen JK. Bicyclic Caged Morpholino Oligonucleotides for Optical Gene Silencing. Chembiochem : a European Journal of Chemical Biology. PMID 36068175 DOI: 10.1002/cbic.202200374  0.091
2009 Jones GS, Yu F, Zeynalzadegan A, Hesselgesser J, Chen X, Chen J, Jin H, Kim CU, Wright M, Geleziunas R, Tsiang M. Preclinical evaluation of GS-9160, a novel inhibitor of human immunodeficiency virus type 1 integrase. Antimicrobial Agents and Chemotherapy. 53: 1194-203. PMID 19104010 DOI: 10.1128/Aac.00984-08  0.091
2004 Rosenzweig BA, Pine PS, Domon OE, Morris SM, Chen JJ, Sistare FD. Dye bias correction in dual-labeled cDNA microarray gene expression measurements. Environmental Health Perspectives. 112: 480-7. PMID 15033598  0.091
2015 Nicolasjilwan M, Hu Y, Yan C, Meerzaman D, Holder CA, Gutman D, Jain R, Colen R, Rubin DL, Zinn PO, Hwang SN, Raghavan P, Hammoud DA, Scarpace LM, Mikkelsen T, ... Chen J, et al. Addition of MR imaging features and genetic biomarkers strengthens glioblastoma survival prediction in TCGA patients. Journal of Neuroradiology. Journal De Neuroradiologie. 42: 212-21. PMID 24997477 DOI: 10.1016/J.Neurad.2014.02.006  0.09
2010 Kodell RL, Chen JJ. Is premarket identification of hepatotoxic drugs and sensitive patients possible based on high-dimensional 'omic data? Personalized Medicine. 7: 171-178. PMID 29783321 DOI: 10.2217/pme.10.7  0.09
2021 Rayos Del Sol S, Guzman A, Shin Yin SS, Gardner B, Bryant S, Chakrabarti MO, McGahan PJ, Chen JL. Single-Portal, Single-Anchor Repair of a Superior Third Subscapularis Tear Using a Self-Punching Knotless Soft Suture Anchor. Arthroscopy Techniques. 10: e2079-e2085. PMID 34504746 DOI: 10.1016/j.eats.2021.05.003  0.09
2007 Sachse C, Chen JZ, Coureux PD, Stroupe ME, Fändrich M, Grigorieff N. High-resolution electron microscopy of helical specimens: a fresh look at tobacco mosaic virus. Journal of Molecular Biology. 371: 812-35. PMID 17585939 DOI: 10.1016/J.Jmb.2007.05.088  0.09
2019 Chen J, Gopalkrishnan S, Chiu C, Chen AY, Campbell EA, Gourse RL, Ross W, Darst SA. TraR allosterically regulates transcription initiation by altering RNA polymerase conformation. Elife. 8. PMID 31841111 DOI: 10.7554/Elife.49375  0.09
2012 Firestone AJ, Weinger JS, Maldonado M, Barlan K, Langston LD, O'Donnell M, Gelfand VI, Kapoor TM, Chen JK. Small-molecule inhibitors of the AAA+ ATPase motor cytoplasmic dynein. Nature. 484: 125-9. PMID 22425997 DOI: 10.1038/Nature10936  0.09
2016 Kennedy Crispin M, Ko JM, Craiglow BG, Li S, Shankar G, Urban JR, Chen JC, Cerise JE, Jabbari A, Winge MC, Marinkovich MP, Christiano AM, Oro AE, King BA. Safety and efficacy of the JAK inhibitor tofacitinib citrate in patients with alopecia areata. Jci Insight. 1: e89776. PMID 27699252 DOI: 10.1172/Jci.Insight.89776  0.089
2021 Weinfurtner K, Cho J, Ackerman D, Chen JX, Woodard A, Li W, Ostrowski D, Soulen MC, Dagli M, Shamimi-Noori S, Mondschein J, Sudheendra D, Stavropoulos SW, Reddy S, Redmond J, et al. Variability in biopsy quality informs translational research applications in hepatocellular carcinoma. Scientific Reports. 11: 22763. PMID 34815453 DOI: 10.1038/s41598-021-02093-6  0.089
2009 Stanton BZ, Peng LF, Maloof N, Nakai K, Wang X, Duffner JL, Taveras KM, Hyman JM, Lee SW, Koehler AN, Chen JK, Fox JL, Mandinova A, Schreiber SL. A small molecule that binds Hedgehog and blocks its signaling in human cells. Nature Chemical Biology. 5: 154-6. PMID 19151731 DOI: 10.1038/Nchembio.142  0.089
2019 Chambers DA, Amir E, Saleh RR, Rodin D, Keating NL, Osterman TJ, Chen JL. The Impact of Big Data Research on Practice, Policy, and Cancer Care. American Society of Clinical Oncology Educational Book. American Society of Clinical Oncology. Annual Meeting. e167-e175. PMID 31099675 DOI: 10.1200/EDBK_238057  0.089
2007 Chen JJ, Tsai CA, Tzeng S, Chen CH. Gene selection with multiple ordering criteria. Bmc Bioinformatics. 8: 74. PMID 17338815 DOI: 10.1186/1471-2105-8-74  0.089
2020 Quiroga D, Liebner DA, Philippon JS, Hoffman S, Tan Y, Chen JL, Lenobel S, Wakely PE, Pollock R, Tinoco G. Activity of PD1 inhibitor therapy in advanced sarcoma: a single-center retrospective analysis. Bmc Cancer. 20: 527. PMID 32503455 DOI: 10.1186/s12885-020-07021-x  0.089
2011 Chen JL, Li J, Stadler WM, Lussier YA. Protein-network modeling of prostate cancer gene signatures reveals essential pathways in disease recurrence. Journal of the American Medical Informatics Association : Jamia. 18: 392-402. PMID 21672909 DOI: 10.1136/Amiajnl-2011-000178  0.089
2016 Chen JK. I only have eye for ewe: the discovery of cyclopamine and development of Hedgehog pathway-targeting drugs. Natural Product Reports. PMID 26787175 DOI: 10.1039/C5Np00153F  0.089
2002 Chen J, Keltner L, Christophersen J, Zheng F, Krouse M, Singhal A, Wang SS. New technology for deep light distribution in tissue for phototherapy. Cancer Journal (Sudbury, Mass.). 8: 154-63. PMID 11999949 DOI: 10.1097/00130404-200203000-00009  0.089
2018 Chen JX, Wileyto EP, Soulen MC. Randomized Embolization Trial for NeuroEndocrine Tumor Metastases to the Liver (RETNET): study protocol for a randomized controlled trial. Trials. 19: 390. PMID 30016989 DOI: 10.1186/s13063-018-2782-5  0.089
2009 McBurney RN, Hines WM, Von Tungeln LS, Schnackenberg LK, Beger RD, Moland CL, Han T, Fuscoe JC, Chang CW, Chen JJ, Su Z, Fan XH, Tong W, Booth SA, Balasubramanian R, et al. The liver toxicity biomarker study: phase I design and preliminary results. Toxicologic Pathology. 37: 52-64. PMID 19171931 DOI: 10.1177/0192623308329287  0.088
2018 Youn GM, Woodall BM, Elena N, Shin EC, Pathare N, McGahan PJ, Chen JL. Arthroscopic Bone Marrow Aspirate Concentrate Harvesting From the Intercondylar Notch of the Knee. Arthroscopy Techniques. 7: e1173-e1176. PMID 30533365 DOI: 10.1016/j.eats.2018.07.016  0.088
2008 Esengil H, Chen JK. Gene regulation technologies in zebrafish. Molecular Biosystems. 4: 300-8. PMID 18354783 DOI: 10.1039/B718447F  0.088
2015 Marabini R, Carragher B, Chen S, Chen J, Cheng A, Downing KH, Frank J, Grassucci RA, Bernard Heymann J, Jiang W, Jonic S, Liao HY, Ludtke SJ, Patwari S, Piotrowski AL, et al. CTF Challenge: Result summary. Journal of Structural Biology. 190: 348-59. PMID 25913484 DOI: 10.1016/J.Jsb.2015.04.003  0.088
2018 Guo X, Myasnikov AG, Chen J, Crucifix C, Papai G, Takacs M, Schultz P, Weixlbaumer A. Structural Basis for NusA Stabilized Transcriptional Pausing. Molecular Cell. 69: 816-827.e4. PMID 29499136 DOI: 10.1016/j.molcel.2018.02.008  0.088
2023 Chen J, Fruhauf A, Fan C, Ponce J, Ueberheide B, Bhabha G, Ekiert DC. Structure of an endogenous mycobacterial MCE lipid transporter. Nature. PMID 37495693 DOI: 10.1038/s41586-023-06366-0  0.088
2016 Ziu M, Dunn IF, Hess C, Fleseriu M, Bodach ME, Tumialan LM, Oyesiku NM, Patel KS, Wang R, Carter BS, Chen JY, Chen CC, Patil CG, Litvack Z, Zada G, et al. Guidelines: Congress of Neurological Surgeons Systematic Review and Evidence-Based Guideline on Posttreatment Follow-up Evaluation of Patients With Nonfunctioning Pituitary Adenomas. Neurosurgery. 79: E541-E543. PMID 27635964 DOI: 10.1227/NEU.0000000000001392  0.088
2021 Dela Rueda T, Del Sol SR, Perinovic S, Tse W, Bryant S, Gardner B, Chakrabarti MO, McGahan PJ, Chen JL. Mini-Open Subpectoral Biceps Tenodesis Using a Suture Anchor with Bone-Bridge Backup. Arthroscopy Techniques. 10: e2639-e2644. PMID 35004143 DOI: 10.1016/j.eats.2021.08.006  0.088
2023 Selby LV, Clark EC, Liebner DA, Chen JL, Tinoco G, Bashian E, Beane JD, Pollock RE, Grignol VP. Adjuvant Palbociclib May be Associated with Delayed Recurrence in Completely Resected Retroperitoneal Liposarcoma: Results of a Single-Institution Retrospective Cohort Study. Annals of Surgical Oncology. PMID 37330448 DOI: 10.1245/s10434-023-13692-0  0.087
2018 Woodall BM, Youn GM, Elena N, Rosinski A, Chakrabarti M, Gwosdz J, Shin EC, Pathare N, McGahan PJ, Chen JL. Anatomic Single-Incision Repair of Distal Biceps Tendon Ruptures Using Intramedullary Soft Anchors. Arthroscopy Techniques. 7: e1177-e1180. PMID 30533366 DOI: 10.1016/j.eats.2018.07.015  0.087
2022 Hwang IM, Rayos Del Sol S, Jenkins SM, Bryant SA, Gardner BB, McGahan P, Chen J. Open Peroneal Tendon Stabilization With Fibular Groove Deepening. Arthroscopy Techniques. 11: e347-e352. PMID 35256974 DOI: 10.1016/j.eats.2021.10.028  0.087
2021 Bryant SA, Trang G, Nash HM, Gardner BB, Kim JY, Park HY, Chakrabarti M, McGahan P, Chen JL. Mini-Open Achilles Repair With a Flat Braided Suture in a Low-Profile Configuration. Arthroscopy Techniques. 10: e451-e455. PMID 33680778 DOI: 10.1016/j.eats.2020.10.019  0.087
2019 Chen KC, Chen JY. All About Shoulder Arthroplasty: What Radiologists Should Know. Seminars in Musculoskeletal Radiology. 23: 126-140. PMID 30925626 DOI: 10.1055/s-0039-1683359  0.087
2020 Olinares PDB, Kang JY, Llewellyn E, Chiu C, Chen J, Malone B, Saecker RM, Campbell EA, Darst SA, Chait BT. Native Mass Spectrometry-Based Screening for Optimal Sample Preparation in Single-Particle Cryo-EM. Structure (London, England : 1993). PMID 33217329 DOI: 10.1016/j.str.2020.11.001  0.087
2015 Alvarez MJ, Chen JC, Califano A. DIGGIT: A Bioconductor package to infer genetic variants driving cellular phenotypes. Bioinformatics (Oxford, England). PMID 26338767 DOI: 10.1093/Bioinformatics/Btv499  0.087
2022 Guzman AJ, Rayos Del Sol SM, Dela Rueda T, Bryant SA, Jenkins S, Gardner B, McGahan PJ, Chen JL. Surgical repair of acute on chronic seven-year pectoralis major rupture near the distal myotendinous junction: A case report. Clinical Case Reports. 10: e6118. PMID 35898730 DOI: 10.1002/ccr3.6118  0.087
2006 Moon H, Ahn H, Kodell RL, Lin CJ, Baek S, Chen JJ. Classification methods for the development of genomic signatures from high-dimensional data. Genome Biology. 7: R121. PMID 17181863 DOI: 10.1186/Gb-2006-7-12-R121  0.086
2007 Garcia JA, Chen J, Hansgen A, Wink O, Movassaghi B, Messenger JC. Rotational angiography (RA) and three-dimensional imaging (3-DRA): an available clinical tool. The International Journal of Cardiovascular Imaging. 23: 9-13. PMID 16779617 DOI: 10.1007/s10554-006-9088-5  0.086
2016 Schmitt AM, Garcia JT, Hung T, Flynn RA, Shen Y, Qu K, Payumo AY, Peres-da-Silva A, Broz DK, Baum R, Guo S, Chen JK, Attardi LD, Chang HY. An inducible long noncoding RNA amplifies DNA damage signaling. Nature Genetics. PMID 27668660 DOI: 10.1038/Ng.3673  0.086
2021 Park J, Kim JY, Kim D, Gardner B, Jenkins S, McGahan PJ, Chen JL. Single-Portal Arthroscopic Posterior Shoulder Stabilization. Arthroscopy Techniques. 10: e2813-e2817. PMID 35004165 DOI: 10.1016/j.eats.2021.08.031  0.086
2022 Jenkins SM, Hwang IM, Del Sol SR, Guzman AJ, Dela Rueda T, McGahan P, Chen J. Subpectoral Biceps Tenodesis Using an All-Suture Anchor. Arthroscopy Techniques. 11: e555-e562. PMID 35493061 DOI: 10.1016/j.eats.2021.12.007  0.085
2018 Carroll KT, Lochte BC, Chen JY, Snyder VS, Carter BS, Chen CC. Intraoperative MRI-guided biopsy in the diagnosis of suprasellar Langerhans Cell Histiocytosis. World Neurosurgery. PMID 29317365 DOI: 10.1016/j.wneu.2017.12.184  0.085
2016 Santiago-Dieppa DR, Zhou T, Jones KA, Gabel BC, Chen JY, Hansen L, U HS. Intracranial Rhabdomyoma: Case Report and Review of the Literature. CurēUs. 8: e593. PMID 27335706 DOI: 10.7759/Cureus.593  0.085
2010 Shestopalov IA, Chen JK. Oligonucleotide-based tools for studying zebrafish development. Zebrafish. 7: 31-40. PMID 20392138 DOI: 10.1089/Zeb.2010.0650  0.085
2009 Tsai CA, Chen JJ. Multivariate analysis of variance test for gene set analysis. Bioinformatics (Oxford, England). 25: 897-903. PMID 19254923 DOI: 10.1093/bioinformatics/btp098  0.085
2016 Kregel S, Chen JL, Tom W, Krishnan V, Kach J, Brechka H, Fessenden TB, Isikbay M, Paner GP, Szmulewitz RZ, Vander Griend DJ. Acquired resistance to the second-generation androgen receptor antagonist enzalutamide in castration-resistant prostate cancer. Oncotarget. PMID 27036029 DOI: 10.18632/Oncotarget.8456  0.085
2021 Chan XY, Volkova E, Eoh J, Black R, Fang L, Gorashi R, Song J, Wang J, Elliott MB, Barreto-Ortiz SF, Chen J, Lin BL, Santhanam L, Cheng L, Lee FS, et al. gain-of-function mutation modulates the stiffness of smooth muscle cells and compromises vascular mechanics. Iscience. 24: 102246. PMID 33796838 DOI: 10.1016/j.isci.2021.102246  0.085
2020 Lai G, Langevin JP, Koek RJ, Krahl SE, Bari AA, Chen JWY. Acute Effects and the Dreamy State Evoked by Deep Brain Electrical Stimulation of the Amygdala: Associations of the Amygdala in Human Dreaming, Consciousness, Emotions, and Creativity. Frontiers in Human Neuroscience. 14: 61. PMID 32158384 DOI: 10.3389/Fnhum.2020.00061  0.085
2021 Saecker RM, Chen J, Chiu CE, Malone B, Sotiris J, Ebrahim M, Yen LY, Eng ET, Darst SA. Structural origins of RNA polymerase open promoter complex stability. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34599106 DOI: 10.1073/pnas.2112877118  0.085
2021 Del Sol SR, Dela Rueda T, Perinovic S, Chakrabarti MO, Bryant S, Gardner B, McGahan PJ, Chen JL. Anchorless Acromioclavicular and Coracoclavicular Ligament Repair Using a Graft-Passing Instrument to Pass Suture Under the Coracoid. Arthroscopy Techniques. 11: e53-e60. PMID 35127429 DOI: 10.1016/j.eats.2021.09.001  0.085
2024 Saecker RM, Mueller AU, Malone B, Chen J, Budell WC, Dandey VP, Maruthi K, Mendez JH, Molina N, Eng ET, Yen LY, Potter CS, Carragher B, Darst SA. Early intermediates in bacterial RNA polymerase promoter melting visualized by time-resolved cryo-electron microscopy. Biorxiv : the Preprint Server For Biology. PMID 38559232 DOI: 10.1101/2024.03.13.584744  0.085
2019 Gwosdz J, Chakrabarti M, Rosinski A, McGahan PJ, Chen JL. A 360° Labral Repair Using Two Portals and a Percutaneous Cannula. Arthroscopy Techniques. 8: e763-e767. PMID 31485404 DOI: 10.1016/j.eats.2019.03.014  0.085
2014 Chen CC, Chen JJ. Benchmark dose calculation for ordered categorical responses. Risk Analysis : An Official Publication of the Society For Risk Analysis. 34: 1435-47. PMID 24444309 DOI: 10.1111/risa.12167  0.085
2019 Chakrabarti MO, Gwosdz J, Rosinski A, Guzman AJ, McGahan PJ, Chen JL. Arthroscopic Double-Pulley Remplissage Using a 2-Portal Technique for Hill-Sachs Lesions in Recurrent Anterior Shoulder Instability. Arthroscopy Techniques. 8: e527-e533. PMID 31334006 DOI: 10.1016/j.eats.2019.01.013  0.084
2020 Haggstrom L, Kang S, Winn R, Putnis S, Nasser E, Chen J, Aghmesheh M, Brungs D. Factors influencing recurrence of stage I-III rectal cancer in regional Australia. Anz Journal of Surgery. PMID 32729654 DOI: 10.1111/ans.16187  0.084
2003 van de Mark K, Chen JS, Steliou K, Perrine SP, Faller DV. Alpha-lipoic acid induces p27Kip-dependent cell cycle arrest in non-transformed cell lines and apoptosis in tumor cell lines. Journal of Cellular Physiology. 194: 325-40. PMID 12548552 DOI: 10.1002/Jcp.10205  0.084
2009 Chen J, Zhang Y, Mendoza J, Denbesten P. Calcium-mediated differentiation of ameloblast lineage cells in vitro. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. 312: 458-64. PMID 19205028 DOI: 10.1002/Jez.B.21279  0.084
2013 Chen JL, Allen CR, Stephens TE, Haas AK, Huston LJ, Wright RW, Feeley BT. Differences in mechanisms of failure, intraoperative findings, and surgical characteristics between single- and multiple-revision ACL reconstructions: a MARS cohort study. The American Journal of Sports Medicine. 41: 1571-8. PMID 23698386 DOI: 10.1177/0363546513487980  0.084
2011 Chang CW, Beland FA, Hines WM, Fuscoe JC, Han T, Chen JJ. Identification and categorization of liver toxicity markers induced by a related pair of drugs. International Journal of Molecular Sciences. 12: 4609-24. PMID 21845099 DOI: 10.3390/ijms12074609  0.084
2013 Vieux EF, Wohlever ML, Chen JZ, Sauer RT, Baker TA. Distinct quaternary structures of the AAA+ Lon protease control substrate degradation. Proceedings of the National Academy of Sciences of the United States of America. 110: E2002-8. PMID 23674680 DOI: 10.1073/Pnas.1307066110  0.084
2013 Moore JC, Sheppard-Tindell S, Shestopalov IA, Yamazoe S, Chen JK, Lawson ND. Post-transcriptional mechanisms contribute to Etv2 repression during vascular development. Developmental Biology. 384: 128-40. PMID 24036310 DOI: 10.1016/J.Ydbio.2013.08.028  0.084
2007 Chen JJ, Chen YJ, Cheng KF. Statistics for risk assessment of chemical carcinogens. Journal of Environmental Science and Health. Part C, Environmental Carcinogenesis & Ecotoxicology Reviews. 25: 281-312. PMID 18000784 DOI: 10.1080/10590500701703989  0.083
2018 Woodall BM, Elena N, Gamboa JT, Shin EC, Pathare N, McGahan PJ, Chen JL. Anterior Cruciate Ligament Reconstruction With Amnion Biological Augmentation. Arthroscopy Techniques. 7: e355-e360. PMID 29868404 DOI: 10.1016/j.eats.2017.10.002  0.083
2021 Kang JY, Llewellyn E, Chen J, Olinares PDB, Brewer J, Chait BT, Campbell EA, Darst SA. Structural basis for transcription complex disruption by the Mfd translocase. Elife. 10. PMID 33480355 DOI: 10.7554/eLife.62117  0.083
2003 Chen YJ, Kodell R, Sistare F, Thompson KL, Morris S, Chen JJ. Normalization methods for analysis of microarray gene-expression data. Journal of Biopharmaceutical Statistics. 13: 57-74. PMID 12635903 DOI: 10.1081/BIP-120017726  0.083
2004 Samatey FA, Matsunami H, Imada K, Nagashima S, Shaikh TR, Thomas DR, Chen JZ, Derosier DJ, Kitao A, Namba K. Structure of the bacterial flagellar hook and implication for the molecular universal joint mechanism. Nature. 431: 1062-8. PMID 15510139 DOI: 10.1038/Nature02997  0.083
2003 Zent CS, Zhan F, Schichman SA, Bumm KH, Lin P, Chen JB, Shaughnessy JD. The distinct gene expression profiles of chronic lymphocytic leukemia and multiple myeloma suggest different anti-apoptotic mechanisms but predict only some differences in phenotype. Leukemia Research. 27: 765-74. PMID 12804633 DOI: 10.1016/s0145-2126(03)00015-8  0.083
2009 Baek S, Tsai CA, Chen JJ. Development of biomarker classifiers from high-dimensional data. Briefings in Bioinformatics. 10: 537-46. PMID 19346320 DOI: 10.1093/bib/bbp016  0.083
2011 Scarth BJ, White KL, Chen JM, Lansdon EB, Swaminathan S, Miller MD, Götte M. Mechanism of resistance to GS-9148 conferred by the Q151L mutation in HIV-1 reverse transcriptase. Antimicrobial Agents and Chemotherapy. 55: 2662-9. PMID 21402840 DOI: 10.1128/Aac.01738-10  0.083
2014 Chesarino NM, Hach JC, Chen JL, Zaro BW, Rajaram MV, Turner J, Schlesinger LS, Pratt MR, Hang HC, Yount JS. Chemoproteomics reveals Toll-like receptor fatty acylation. Bmc Biology. 12: 91. PMID 25371237 DOI: 10.1186/S12915-014-0091-3  0.082
2023 Mueller AU, Chen J, Wu M, Chiu C, Nixon BT, Campbell EA, Darst SA. A general mechanism for transcription bubble nucleation in bacteria. Proceedings of the National Academy of Sciences of the United States of America. 120: e2220874120. PMID 36972428 DOI: 10.1073/pnas.2220874120  0.082
2022 Kim DH, Kim JY, Park J, Talwar M, Jenkins S, Gardner B, McGahan P, Chen JL. Combined Double-Pulley Remplissage and Bankart Repair. Arthroscopy Techniques. 11: e419-e425. PMID 35256986 DOI: 10.1016/j.eats.2021.11.011  0.082
2013 Liu X, Kapoor TM, Chen JK, Huse M. Diacylglycerol promotes centrosome polarization in T cells via reciprocal localization of dynein and myosin II. Proceedings of the National Academy of Sciences of the United States of America. 110: 11976-81. PMID 23818610 DOI: 10.1073/Pnas.1306180110  0.082
2002 Chen JK, Taipale J, Cooper MK, Beachy PA. Inhibition of Hedgehog signaling by direct binding of cyclopamine to Smoothened. Genes & Development. 16: 2743-8. PMID 12414725 DOI: 10.1101/Gad.1025302  0.082
2013 Yi J, Wu X, Chung AH, Chen JK, Kapoor TM, Hammer JA. Centrosome repositioning in T cells is biphasic and driven by microtubule end-on capture-shrinkage. The Journal of Cell Biology. 202: 779-92. PMID 23979719 DOI: 10.1083/Jcb.201301004  0.082
2013 Jamshidi P, Chen JY, Wang HY, Chen CC. Anaplastic lymphoma kinase-positive large cell lymphoma of the anterior skull base: Report of an unusual case and review of the literature. Surgical Neurology International. 4: 57. PMID 23646267 DOI: 10.4103/2152-7806.110656  0.082
2002 Kang D, Chen J, Wong J, Fang G. The checkpoint protein Chfr is a ligase that ubiquitinates Plk1 and inhibits Cdc2 at the G2 to M transition. The Journal of Cell Biology. 156: 249-59. PMID 11807090 DOI: 10.1083/jcb.200108016  0.082
2010 Chen JJ, Roberson PK, Schell MJ. The false discovery rate: a key concept in large-scale genetic studies. Cancer Control : Journal of the Moffitt Cancer Center. 17: 58-62. PMID 20010520  0.082
2012 Kuo AJ, Song J, Cheung P, Ishibe-Murakami S, Yamazoe S, Chen JK, Patel DJ, Gozani O. The BAH domain of ORC1 links H4K20me2 to DNA replication licensing and Meier-Gorlin syndrome. Nature. 484: 115-9. PMID 22398447 DOI: 10.1038/Nature10956  0.082
2021 Nano PR, Johnson TK, Kudo T, Mooney NA, Ni J, Demeter J, Jackson PK, Chen JK. Structure-activity mapping of ARHGAP36 reveals regulatory roles for its GAP homology and C-terminal domains. Plos One. 16: e0251684. PMID 33999959 DOI: 10.1371/journal.pone.0251684  0.081
2012 Mossa-Basha M, Chen J, Gandhi D. Imaging of cerebral arteriovenous malformations and dural arteriovenous fistulas. Neurosurgery Clinics of North America. 23: 27-42. PMID 22107856 DOI: 10.1016/J.Nec.2011.09.007  0.081
2010 Lin WJ, Hsueh HM, Chen JJ. Power and sample size estimation in microarray studies. Bmc Bioinformatics. 11: 48. PMID 20100337 DOI: 10.1186/1471-2105-11-48  0.081
2018 Hwang S, Mruk K, Rahighi S, Raub AG, Chen CH, Dorn LE, Horikoshi N, Wakatsuki S, Chen JK, Mochly-Rosen D. Correcting glucose-6-phosphate dehydrogenase deficiency with a small-molecule activator. Nature Communications. 9: 4045. PMID 30279493 DOI: 10.1038/S41467-018-06447-Z  0.081
2007 Tsai CA, Chen DT, Chen JJ, Balch CM, Thompson JF, Soong SJ. An integrated tree-based classification approach to prognostic grouping with application to localized melanoma patients Journal of Biopharmaceutical Statistics. 17: 445-460. PMID 17479393 DOI: 10.1080/10543400701199585  0.081
2020 Yin SSS, Remigio van Gogh AM, Youn GM, Alvarez A, Chakrabarti MO, McGahan PJ, Chen JL. Transtibial Pull-Out Repair of Converted Radial Tear Adjacent to Medial Meniscus Root. Arthroscopy Techniques. 9: e171-e176. PMID 32021792 DOI: 10.1016/j.eats.2019.09.012  0.081
2022 Cao X, Boyaci H, Chen J, Bao Y, Landick R, Campbell EA. Basis of narrow-spectrum activity of fidaxomicin on Clostridioides difficile. Nature. PMID 35388215 DOI: 10.1038/s41586-022-04545-z  0.081
2022 Kabra KB, Lendvay TS, Chen J, Rolley P, Dawson T, Mores CN. Inactivation strategies for SARS-CoV-2 on surgical masks using light-activated chemical dyes. American Journal of Infection Control. 50: 844-848. PMID 35908821 DOI: 10.1016/j.ajic.2022.03.015  0.08
2020 Chang WH, Lo SM, Chen TL, Chen JC, Wu HN. Utilizing Online Stochastic Optimization on Scheduling of Intensity-Modulate Radiotherapy Therapy (IMRT). Journal of Biomedical Informatics. 103499. PMID 32653620 DOI: 10.1016/j.jbi.2020.103499  0.08
2014 Raghavan P, Chen JL, Fosler-Lussier E, Lai AM. How essential are unstructured clinical narratives and information fusion to clinical trial recruitment? Amia Joint Summits On Translational Science Proceedings Amia Summit On Translational Science. 2014: 218-23. PMID 25717416  0.08
2023 Sreepada RS, Chang AC, West NC, Sujan J, Lai B, Poznikoff AK, Munk R, Froese NR, Chen JC, Görges M. Dashboard of Short-Term Postoperative Patient Outcomes for Anesthesiologists: Development and Preliminary Evaluation. Jmir Perioperative Medicine. 6: e47398. PMID 37725426 DOI: 10.2196/47398  0.08
2004 Zent CS, Chen JB, Kurten RC, Kaushal GP, Lacy HM, Schichman SA. Alemtuzumab (CAMPATH 1H) does not kill chronic lymphocytic leukemia cells in serum free medium. Leukemia Research. 28: 495-507. PMID 15068903 DOI: 10.1016/J.Leukres.2003.09.011  0.08
2011 Clanton JA, Shestopalov I, Chen JK, Gamse JT. Lineage labeling of zebrafish cells with laser uncagable fluorescein dextran. Journal of Visualized Experiments : Jove. PMID 21559005 DOI: 10.3791/2672  0.08
2022 Chen JB, Baral EC, Hopper RH, McDonald JF, Koff MF, Potter HG, Bauer TW, Engh CA, Wright TM, Padgett DE. A Postmortem Analysis of Polyethylene Damage and Periprosthetic Tissue in Rotating Platform and Fixed Bearing Tibial Inserts. The Journal of Arthroplasty. PMID 35183710 DOI: 10.1016/j.arth.2022.02.051  0.08
2012 Chen JL, Otto K, Vander Griend D. Role of homeobox pathway in prostate carcinogenesis. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 30: 126. PMID 27968195 DOI: 10.1200/jco.2012.30.5_suppl.126  0.08
2022 Yabe TE, King K, Russell S, Satgunaseelan L, Gupta R, Chen J, Ashford B. "MYH9 mutation and squamous cell cancer of the tongue in a young adult: a novel case report". Diagnostic Pathology. 17: 23. PMID 35125114 DOI: 10.1186/s13000-022-01210-x  0.08
2024 Chidyagwai SG, Kaplan MS, Jensen CW, Chen JS, Chamberlain RC, Hill KD, Barker PCA, Slesnick TC, Randles A. Surgical Modulation of Pulmonary Artery Shear Stress: A Patient-Specific CFD Analysis of the Norwood Procedure. Cardiovascular Engineering and Technology. PMID 38459240 DOI: 10.1007/s13239-024-00724-3  0.08
2019 Boyaci H, Chen J, Jansen R, Darst SA, Campbell EA. Structures of an RNA polymerase promoter melting intermediate elucidate DNA unwinding. Nature. 565: 382-385. PMID 30626968 DOI: 10.1038/S41586-018-0840-5  0.08
2023 Cuenin K, Chen J, Tai SK, Lee D, Gerges G, Oh H. Caries detection and characterization in pediatric patients using iTero 5D near-infrared technology. American Journal of Orthodontics and Dentofacial Orthopedics : Official Publication of the American Association of Orthodontists, Its Constituent Societies, and the American Board of Orthodontics. PMID 37702639 DOI: 10.1016/j.ajodo.2023.06.026  0.079
2011 Settembre EC, Chen JZ, Dormitzer PR, Grigorieff N, Harrison SC. Atomic model of an infectious rotavirus particle. The Embo Journal. 30: 408-16. PMID 21157433 DOI: 10.1038/Emboj.2010.322  0.079
2018 Woodall BM, Elena N, Mirvish AB, Shin EC, Pathare NP, McGahan PJ, Chen JL. Submeniscal Portal for Horizontal Cleavage Tear with Parameniscal Cyst of the Lateral Meniscus. Arthroscopy Techniques. 7: e529-e532. PMID 29868430 DOI: 10.1016/j.eats.2018.01.006  0.079
2013 Zou W, Tang H, Zhao W, Meehan J, Foley SL, Lin WJ, Chen HC, Fang H, Nayak R, Chen JJ. Data mining tools for Salmonella characterization: application to gel-based fingerprinting analysis. Bmc Bioinformatics. 14: S15. PMID 24267777 DOI: 10.1186/1471-2105-14-S14-S15  0.079
2010 Lee Y, Li J, Gamazon E, Chen JL, Tikhomirov A, Cox NJ, Lussier YA. Biomolecular Systems of Disease Buried Across Multiple GWAS Unveiled by Information Theory and Ontology. Amia Joint Summits On Translational Science Proceedings Amia Summit On Translational Science. 2010: 31-5. PMID 21347143  0.079
2013 Rao AA, Naheedy JH, Chen JY, Robbins SL, Ramkumar HL. A clinical update and radiologic review of pediatric orbital and ocular tumors. Journal of Oncology. 2013: 975908. PMID 23577029 DOI: 10.1155/2013/975908  0.079
2016 Zhao W, Chen JJ, Perkins R, Wang Y, Liu Z, Hong H, Tong W, Zou W. A novel procedure on next generation sequencing data analysis using text mining algorithm. Bmc Bioinformatics. 17: 213. PMID 27177941 DOI: 10.1186/s12859-016-1075-9  0.079
2020 Chen J, Boyaci H, Campbell EA. Diverse and unified mechanisms of transcription initiation in bacteria. Nature Reviews. Microbiology. PMID 33122819 DOI: 10.1038/s41579-020-00450-2  0.079
2020 Adams EJ, Asad S, Reinbolt R, Collier KA, Abdel-Rasoul M, Gillespie S, Chen JL, Cherian MA, Noonan AM, Sardesai S, VanDeusen J, Wesolowski R, Williams N, Shapiro CL, Macrae ER, et al. Metastatic breast cancer patient perceptions of somatic tumor genomic testing. Bmc Cancer. 20: 389. PMID 32375690 DOI: 10.1186/S12885-020-06905-2  0.079
2016 Langevin JP, Chen JW, Koek RJ, Sultzer DL, Mandelkern MA, Schwartz HN, Krahl SE. Deep Brain Stimulation of the Basolateral Amygdala: Targeting Technique and Electrodiagnostic Findings. Brain Sciences. 6. PMID 27517963 DOI: 10.3390/brainsci6030028  0.079
2023 Shin C, Guzman A, Haratian A, Borovinsky J, Youn E, McGahan P, Chen J. Glenoid Avulsion of the Glenohumeral Ligament Repair Through a Single Working Portal. Arthroscopy Techniques. 12: e285-e289. PMID 36879870 DOI: 10.1016/j.eats.2022.11.004  0.078
2007 Zhang Y, Li W, Chi HS, Chen J, Denbesten PK. JNK/c-Jun signaling pathway mediates the fluoride-induced down-regulation of MMP-20 in vitro. Matrix Biology : Journal of the International Society For Matrix Biology. 26: 633-41. PMID 17611094 DOI: 10.1016/j.matbio.2007.06.002  0.078
2004 Tsai CA, Lee TC, Ho IC, Yang UC, Chen CH, Chen JJ. Multi-class clustering and prediction in the analysis of microarray data. Mathematical Biosciences. 193: 79-100. PMID 15681277 DOI: 10.1016/j.mbs.2004.07.002  0.078
2016 Niazi MK, Yao K, Zynger D, Clinton S, Chen J, Koyuturk M, LaFramboise T, Gurcan M. Visually Meaningful Histopathological Features for Automatic Grading of Prostate Cancer. Ieee Journal of Biomedical and Health Informatics. PMID 28113734 DOI: 10.1109/Jbhi.2016.2565515  0.078
2016 Niazi MK, Yao K, Zynger D, Clinton S, Chen J, Koyuturk M, LaFramboise T, Gurcan M. Visually Meaningful Histopathological Features for Automatic Grading of Prostate Cancer. Ieee Journal of Biomedical and Health Informatics. PMID 27214921 DOI: 10.1109/JBHI.2016.2565515  0.078
2005 Tsai CA, Wang SJ, Chen DT, Chen JJ. Sample size for gene expression microarray experiments. Bioinformatics (Oxford, England). 21: 1502-8. PMID 15564298 DOI: 10.1093/bioinformatics/bti162  0.078
2023 Nestorovoski DL, Haratian R, Guzman A, Bolia IK, Chen JL, Liu JN, Petrigliano FA, Weber AE, Rick Hatch GF. All-Inside PCL Reconstruction, Double Bundle, With Internal Brace Augmentation. Arthroscopy Techniques. 12: e1211-e1218. PMID 37533902 DOI: 10.1016/j.eats.2023.03.013  0.078
2006 Meloni AR, Fralish GB, Kelly P, Salahpour A, Chen JK, Wechsler-Reya RJ, Lefkowitz RJ, Caron MG. Smoothened signal transduction is promoted by G protein-coupled receptor kinase 2. Molecular and Cellular Biology. 26: 7550-60. PMID 16908539 DOI: 10.1128/Mcb.00546-06  0.078
2017 Langevin JP, Koek RJ, Schwartz HN, Chen JWY, Sultzer DL, Mandelkern MA, Kulick AD, Krahl SE. Neuromodulation for Treatment-Refractory PTSD. Federal Practitioner : For the Health Care Professionals of the Va, Dod, and Phs. 34: 20S-33S. PMID 30766304  0.078
2009 Boojamra CG, Parrish JP, Sperandio D, Gao Y, Petrakovsky OV, Lee SK, Markevitch DY, Vela JE, Laflamme G, Chen JM, Ray AS, Barron AC, Sparacino ML, Desai MC, Kim CU, et al. Design, synthesis, and anti-HIV activity of 4'-modified carbocyclic nucleoside phosphonate reverse transcriptase inhibitors. Bioorganic & Medicinal Chemistry. 17: 1739-46. PMID 19179082 DOI: 10.1016/J.Bmc.2008.12.028  0.078
2014 Barthelme D, Chen JZ, Grabenstatter J, Baker TA, Sauer RT. Architecture and assembly of the archaeal Cdc48*20S proteasome. Proceedings of the National Academy of Sciences of the United States of America. 111: E1687-94. PMID 24711419 DOI: 10.1073/Pnas.1404823111  0.078
2002 Mancuso JY, Ahn H, Chen JJ, Mancuso JP. Age-adjusted exact trend tests in the event of rare occurrences. Biometrics. 58: 403-12. PMID 12071414 DOI: 10.1111/J.0006-341X.2002.00403.X  0.077
2023 Chen AP, Sharon E, O'Sullivan-Coyne G, Moore N, Foster JC, Hu JS, Van Tine BA, Conley AP, Read WL, Riedel RF, Burgess MA, Glod J, Davis EJ, Merriam P, Naqash AR, ... ... Chen JL, et al. Atezolizumab for Advanced Alveolar Soft Part Sarcoma. The New England Journal of Medicine. 389: 911-921. PMID 37672694 DOI: 10.1056/NEJMoa2303383  0.077
2012 Chen JL, Li J, Kiriluk KJ, Rosen AM, Paner GP, Antic T, Lussier YA, Vander Griend DJ. Deregulation of a Hox protein regulatory network spanning prostate cancer initiation and progression. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 18: 4291-302. PMID 22723371 DOI: 10.1158/1078-0432.Ccr-12-0373  0.077
2013 Cho YS, Jung HJ, Seok SH, Payumo AY, Chen JK, Kwon HJ. Functional inhibition of UQCRB suppresses angiogenesis in zebrafish. Biochemical and Biophysical Research Communications. 433: 396-400. PMID 23454382 DOI: 10.1016/J.Bbrc.2013.02.082  0.077
2017 Croce CM, Casadei L, Calore F, Creighton CJ, Guescini M, Batte K, Iwenofu OH, Zewdu A, Braggio D, Bill KL, Fadda P, Lovat F, Lopez G, Gasparini P, Chen JL, et al. Exosome-derived miR-25-3p and miR-92a-3p stimulate liposarcoma progression. Cancer Research. PMID 28588009 DOI: 10.1158/0008-5472.Can-16-2984  0.077
2021 Park HY, Gardner B, Kim JY, Bryant S, Chakrabarti M, McGahan P, Chen JL. Four-Strand Hamstring Diamond Braid Technique for Anterior Cruciate Ligament Reconstruction. Arthroscopy Techniques. 10: e1173-e1177. PMID 33981567 DOI: 10.1016/j.eats.2021.01.011  0.077
2022 Latif RK, Clifford SP, Ghafghazi S, Phipps Z, Chen JJ, Sangroula D, Khan AZ, Saleem J, Farah I, Huang J, Businger JR. Echocardiography and Management for Cardiac Trauma. Journal of Cardiothoracic and Vascular Anesthesia. PMID 35305892 DOI: 10.1053/j.jvca.2022.02.010  0.077
2010 Erten A, Hall D, Hoh C, Tran Cao HS, Kaushal S, Esener S, Hoffman RM, Bouvet M, Chen J, Kesari S, Makale M. Enhancing magnetic resonance imaging tumor detection with fluorescence intensity and lifetime imaging. Journal of Biomedical Optics. 15: 066012. PMID 21198186 DOI: 10.1117/1.3509111  0.077
2013 Lee K, Ahn H, Moon H, Kodell RL, Chen JJ. Multinomial logistic regression ensembles. Journal of Biopharmaceutical Statistics. 23: 681-94. PMID 23611203 DOI: 10.1080/10543406.2012.756500  0.077
2003 Chen JZ, Fürst J, Chapman MS, Grigorieff N. Low-resolution structure refinement in electron microscopy. Journal of Structural Biology. 144: 144-51. PMID 14643217 DOI: 10.1016/J.Jsb.2003.09.008  0.076
2015 Welch RD, Ayaz SI, Lewis LM, Unden J, Chen JY, Mika VH, Saville B, Tyndall JA, Nash M, Buki A, Barzo P, Hack D, Tortella FC, Schmid K, Hayes RL, et al. Ability of Serum Glial Fibrillary Acidic Protein, Ubiquitin C-Terminal Hydrolase-L1, and S100B to Differentiate Normal and Abnormal Head Computed Tomography Findings in Patients with Suspected Mild or Moderate Traumatic Brain Injury. Journal of Neurotrauma. PMID 26467555 DOI: 10.1089/Neu.2015.4149  0.076
2011 Mich JK, Chen JK. Hedgehog and retinoic acid signaling cooperate to promote motoneurogenesis in zebrafish. Development (Cambridge, England). 138: 5113-9. PMID 22069185 DOI: 10.1242/Dev.066225  0.076
2018 Elena N, Woodall BM, Ahn S, McGahan PJ, Pathare NP, Shin EC, Chen JL. Anterior Shoulder Stabilization Using a Single Portal Technique With Suture Lasso. Arthroscopy Techniques. 7: e505-e509. PMID 29868426 DOI: 10.1016/j.eats.2018.01.002  0.076
2019 Youn GM, Chakrabarti MO, McGahan PJ, Chen JL. Acromioclavicular Joint Repair Using a Suture Cerclage Tensioning System. Arthroscopy Techniques. 8: e1555-e1560. PMID 31890537 DOI: 10.1016/j.eats.2019.08.006  0.076
2023 Kang JY, Mishanina TV, Bao Y, Chen J, Llewellyn E, Liu J, Darst SA, Landick R. An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options. Proceedings of the National Academy of Sciences of the United States of America. 120: e2215945120. PMID 36795753 DOI: 10.1073/pnas.2215945120  0.076
2015 Zhao W, Chen JJ, Foley S, Wang Y, Zhao S, Basinger J, Zou W. Biomarker identification from next-generation sequencing data for pathogen bacteria characterization and surveillance. Biomarkers in Medicine. PMID 26501894 DOI: 10.2217/bmm.15.88  0.076
2020 Shboul ZA, Chen J, M Iftekharuddin K. Prediction of Molecular Mutations in Diffuse Low-Grade Gliomas using MR Imaging Features. Scientific Reports. 10: 3711. PMID 32111869 DOI: 10.1038/s41598-020-60550-0  0.076
2006 Cihlar T, He GX, Liu X, Chen JM, Hatada M, Swaminathan S, McDermott MJ, Yang ZY, Mulato AS, Chen X, Leavitt SA, Stray KM, Lee WA. Suppression of HIV-1 protease inhibitor resistance by phosphonate-mediated solvent anchoring. Journal of Molecular Biology. 363: 635-47. PMID 16979654 DOI: 10.1016/j.jmb.2006.07.073  0.076
2020 Ciepla P, Cho U, Chen JK. trLRET microscopy: Ultrasensitive imaging of lanthanide luminophores. Methods in Enzymology. 640: 225-248. PMID 32560800 DOI: 10.1016/Bs.Mie.2020.04.030  0.076
2020 Youn GM, Van Gogh AMR, Mirvish AB, Chakrabarti MO, McGahan PJ, Chen JL. Inside-Out Bucket-Handle Meniscus Repair With a Single-Handed Self-Advancing Zone-Specific Meniscus Repair Device. Arthroscopy Techniques. 9: e117-e121. PMID 32021784 DOI: 10.1016/j.eats.2019.09.007  0.075
2008 Morris SM, Akerman GS, Desai VG, Tsai CA, Tolleson WH, Melchior WB, Lin CJ, Fuscoe JC, Casciano DA, Chen JJ. Effect of p53 genotype on gene expression profiles in murine liver. Mutation Research. 640: 54-73. PMID 18206960 DOI: 10.1016/J.Mrfmmm.2007.12.004  0.075
2014 Bonger KM, Rakhit R, Payumo AY, Chen JK, Wandless TJ. General method for regulating protein stability with light. Acs Chemical Biology. 9: 111-5. PMID 24180414 DOI: 10.1021/Cb400755B  0.075
2013 Bowyer JF, Patterson TA, Saini UT, Hanig JP, Thomas M, Camacho L, George NI, Chen JJ. Comparison of the global gene expression of choroid plexus and meninges and associated vasculature under control conditions and after pronounced hyperthermia or amphetamine toxicity. Bmc Genomics. 14: 147. PMID 23497014 DOI: 10.1186/1471-2164-14-147  0.075
2018 Takamura KM, Chen JB, Petrigliano FA. Nonarthroplasty Options for the Athlete or Active Individual with Shoulder Osteoarthritis. Clinics in Sports Medicine. 37: 517-526. PMID 30201166 DOI: 10.1016/j.csm.2018.05.003  0.075
2015 Chen J, Stavropoulos SW. Management of Endoleaks. Seminars in Interventional Radiology. 32: 259-64. PMID 26327744 DOI: 10.1055/s-0035-1556825  0.074
2020 Wittke F, Vincent C, Chen J, Heller B, Kabler H, Overcash JS, Leylavergne F, Dieppois G. Afabicin, a first-in-class anti-staphylococcal antibiotic, in the treatment of acute bacterial skin and skin structure infections: clinical non-inferiority to vancomycin/linezolid. Antimicrobial Agents and Chemotherapy. PMID 32747361 DOI: 10.1128/Aac.00250-20  0.074
2020 Chen J, Malone B, Llewellyn E, Grasso M, Shelton PMM, Olinares PDB, Maruthi K, Eng ET, Vatandaslar H, Chait B, Kapoor T, Darst SA, Campbell EA. Structural basis for helicase-polymerase coupling in the SARS-CoV-2 replication-transcription complex. Biorxiv : the Preprint Server For Biology. PMID 32676607 DOI: 10.1101/2020.07.08.194084  0.074
2018 Patel KS, Dhawan S, Wang R, Carter BS, Chen JY, Chen CC. Post-operative imaging assessment of non-functioning pituitary adenomas. Acta Neurochirurgica. PMID 29453734 DOI: 10.1007/s00701-018-3491-2  0.074
2023 Malone BF, Perry JK, Olinares PDB, Lee HW, Chen J, Appleby TC, Feng JY, Bilello JP, Ng H, Sotiris J, Ebrahim M, Chua EYD, Mendez JH, Eng ET, Landick R, et al. Structural basis for substrate selection by the SARS-CoV-2 replicase. Nature. PMID 36725929 DOI: 10.1038/s41586-022-05664-3  0.074
2019 Tischfield DJ, Ackerman D, Noji M, Chen JX, Johnson O, Perkons NR, Nadolski GJ, Hunt SJ, Soulen MC, Furth EE, Gade TP. Establishment of hepatocellular carcinoma patient-derived xenografts from image-guided percutaneous biopsies. Scientific Reports. 9: 10546. PMID 31332214 DOI: 10.1038/S41598-019-47104-9  0.074
2012 McBurney RN, Hines WM, VonTungeln LS, Schnackenberg LK, Beger RD, Moland CL, Han T, Fuscoe JC, Chang CW, Chen JJ, Su Z, Fan XH, Tong W, Booth SA, Balasubramanian R, et al. The liver toxicity biomarker study phase I: markers for the effects of tolcapone or entacapone. Toxicologic Pathology. 40: 951-64. PMID 22573522 DOI: 10.1177/0192623312444026  0.074
2012 Perin EC, Willerson JT, Pepine CJ, Henry TD, Ellis SG, Zhao DX, Silva GV, Lai D, Thomas JD, Kronenberg MW, Martin AD, Anderson RD, Traverse JH, Penn MS, Anwaruddin S, ... ... Chen J, et al. Effect of transendocardial delivery of autologous bone marrow mononuclear cells on functional capacity, left ventricular function, and perfusion in chronic heart failure: the FOCUS-CCTRN trial. Jama. 307: 1717-26. PMID 22447880 DOI: 10.1001/Jama.2012.418  0.074
2018 Advani R, Flinn I, Popplewell L, Forero A, Bartlett NL, Ghosh N, Kline J, Roschewski M, LaCasce A, Collins GP, Tran T, Lynn J, Chen JY, Volkmer JP, Agoram B, et al. CD47 Blockade by Hu5F9-G4 and Rituximab in Non-Hodgkin's Lymphoma. The New England Journal of Medicine. 379: 1711-1721. PMID 30380386 DOI: 10.1056/Nejmoa1807315  0.074
2023 Guzman A, Shin C, Gamboa M, Wu D, Dela Rueda T, Jenkins S, McGahan P, Chen J. Arthroscopic repair of traumatic rotator cuff tear following total shoulder arthroplasty: A case report and review of literature. Clinical Case Reports. 11: e7210. PMID 37151954 DOI: 10.1002/ccr3.7210  0.074
2016 Garner AL, Rammohan J, Huynh JP, Onder LM, Chen J, Bae B, Jensen D, Weiss LA, Ruiz Manzano A, Darst SA, Campbell EA, Nickels BE, Galburt EA, Stallings CL. Effects of Increasing the Affinity of CarD for RNA Polymerase on Mycobacterium tuberculosis Growth, rRNA Transcription, and Virulence. Journal of Bacteriology. PMID 27920294 DOI: 10.1128/Jb.00698-16  0.074
2013 Sena M, Chen J, Dellamaggioria R, Coughlin DG, Lotz JC, Feeley BT. Dynamic evaluation of pivot-shift kinematics in physeal-sparing pediatric anterior cruciate ligament reconstruction techniques. The American Journal of Sports Medicine. 41: 826-34. PMID 23408589 DOI: 10.1177/0363546513476470  0.074
2021 Rosinski A, Chen JL, McGahan PJ. A partial articular-sided supraspinatus tear caused by the biceps tendon: A novel etiology of internal impingement. Clinical Case Reports. 9. PMID 34194749 DOI: 10.1002/ccr3.4044  0.074
2011 England S, Batista MF, Mich JK, Chen JK, Lewis KE. Roles of Hedgehog pathway components and retinoic acid signalling in specifying zebrafish ventral spinal cord neurons. Development (Cambridge, England). 138: 5121-34. PMID 22069186 DOI: 10.1242/Dev.066159  0.074
2020 Chen J, Malone B, Llewellyn E, Grasso M, Shelton PMM, Olinares PDB, Maruthi K, Eng ET, Vatandaslar H, Chait BT, Kapoor TM, Darst SA, Campbell EA. Structural Basis for Helicase-Polymerase Coupling in the SARS-CoV-2 Replication-Transcription Complex. Cell. PMID 32783916 DOI: 10.1016/J.Cell.2020.07.033  0.074
2020 Hügel C, Chen J, Poznikoff AK, West NC, Reimer E, Görges M. Intravenous cannula placement in children for induction of general anesthesia: prospective audit and identification of success factors. Paediatric Anaesthesia. PMID 32464692 DOI: 10.1111/Pan.13936  0.074
2022 Chen J, Johnson L, McKenna K, Choi T, Duan J, Feng D, Tsai J, Garcia-Martin N, Sompalli K, Maute R, Vyas P, Majeti R, Takimoto C, Liu J, Ramsingh G, et al. MDS-482 Impact Of Magrolimab in Combination With Azacitidine on Red Blood Cells (RBCs) in Patients With Higher-Risk Myelodysplastic Syndromes (HR MDS). Clinical Lymphoma, Myeloma & Leukemia. S317-S318. PMID 36163968 DOI: 10.1016/S2152-2650(22)01421-5  0.074
2020 Crapster JA, Rack PG, Hellmann ZJ, Le AD, Adams CM, Leib RD, Elias JE, Perrino J, Behr B, Li Y, Lin J, Zeng H, Chen JK. HIPK4 is essential for murine spermiogenesis. Elife. 9. PMID 32163033 DOI: 10.7554/Elife.50209  0.074
2010 Lega BC, Bailey RL, Kramer DR, Heuer GG, Chen JY, Schuster JM. Isolated lower extremity monoplegia due to a traumatic intraparenchymal contusion: report of two cases. Brain Injury. 24: 1231-5. PMID 20642321 DOI: 10.3109/02699052.2010.495698  0.073
2007 Costes SV, Ponomarev AL, Chen JL, Nguyen D, Cucinotta FA, Barcellos-Hoff MH. Image-Based Modeling Reveals Dynamic Redistribution of DNA Damage into Nuclear Sub-Domains Plos Computational Biology. 3. PMID 17676951 DOI: 10.1371/Journal.Pcbi.0030155  0.073
2021 Kim JY, Park HY, Bryant S, Gardner B, Chakrabarti M, McGahan P, Chen JL. Combined Coracoclavicular and Acromioclavicular Joint Reconstruction with Allograft Using a Cerclage Tensioning System. Arthroscopy Techniques. 10: e317-e323. PMID 33680762 DOI: 10.1016/j.eats.2020.10.013  0.073
2010 Wang S, Bromley E, Xu L, Chen JC, Keltner L. Talaporfin sodium. Expert Opinion On Pharmacotherapy. 11: 133-40. PMID 20001435 DOI: 10.1517/14656560903463893  0.073
2008 Chen JY, Hruby G, Scolyer RA, Murali R, Hong A, Fitzgerald P, Pham TT, Quinn MJ, Thompson JF. Desmoplastic neurotropic melanoma: a clinicopathologic analysis of 128 cases. Cancer. 113: 2770-8. PMID 18823042 DOI: 10.1002/cncr.23895  0.073
2008 Hong H, Su Z, Ge W, Shi L, Perkins R, Fang H, Xu J, Chen JJ, Han T, Kaput J, Fuscoe JC, Tong W. Assessing batch effects of genotype calling algorithm BRLMM for the Affymetrix GeneChip Human Mapping 500 K array set using 270 HapMap samples. Bmc Bioinformatics. S17. PMID 18793462 DOI: 10.1186/1471-2105-9-S9-S17  0.073
2014 Yang HC, Lin CW, Chen CW, Chen JJ. Applying genome-wide gene-based expression quantitative trait locus mapping to study population ancestry and pharmacogenetics. Bmc Genomics. 15: 319. PMID 24779372 DOI: 10.1186/1471-2164-15-319  0.073
2019 Choy E, Ballman K, Chen J, Dickson MA, Chugh R, George S, Okuno S, Pollock R, Patel RM, Hoering A, Patel S. Corrigendum to "SARC018_SPORE02: Phase II Study of Mocetinostat Administered with Gemcitabine for Patients with Metastatic Leiomyosarcoma with Progression or Relapse following Prior Treatment with Gemcitabine-Containing Therapy". Sarcoma. 2019: 7608743. PMID 31534435 DOI: 10.1155/2019/7608743  0.072
2022 Trang G, Del Sol SR, Jenkins S, Bryant S, Gardner B, Chakrabarti MO, McGahan PJ, Chen JL. Evaluation of Osteochondral Allograft Transplant Using In-Office Needle Arthroscopy. Arthroscopy Techniques. 11: e2243-e2248. PMID 36632378 DOI: 10.1016/j.eats.2022.08.032  0.072
2021 Malone B, Chen J, Wang Q, Llewellyn E, Choi YJ, Olinares PDB, Cao X, Hernandez C, Eng ET, Chait BT, Shaw DE, Landick R, Darst SA, Campbell EA. Structural basis for backtracking by the SARS-CoV-2 replication-transcription complex. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33883267 DOI: 10.1073/pnas.2102516118  0.072
2008 Chen JK. Fish 'n clicks. Nature Chemical Biology. 4: 391-2. PMID 18560429 DOI: 10.1038/Nchembio0708-391  0.072
2007 Kodell RL, Chen JJ. On the use of hierarchical probabilistic models for characterizing and managing uncertainty in risk/safety assessment. Risk Analysis : An Official Publication of the Society For Risk Analysis. 27: 433-7. PMID 17511709 DOI: 10.1111/j.1539-6924.2007.00895.x  0.072
2021 Nash HM, Trang G, Bryant SA, Mirvish AB, Gardner BB, Chakrabarti MO, McGahan PJ, Chen JL. Stemless Total Shoulder Arthroplasty With Orthobiologic Augmentation. Arthroscopy Techniques. 10: e531-e538. PMID 33680788 DOI: 10.1016/j.eats.2020.10.036  0.072
2002 Liu JP, Hsueh HM, Hsieh E, Chen JJ. Tests for equivalence or non-inferiority for paired binary data. Statistics in Medicine. 21: 231-45. PMID 11782062 DOI: 10.1002/sim.1012  0.072
2023 Chen JB, Borsinger TM, Chalmers BP, Debbi EM. Joint Replacement Technology in the Ambulatory Surgery Center: Current and Future Applications. Hss Journal : the Musculoskeletal Journal of Hospital For Special Surgery. 20: 18-21. PMID 38356759 DOI: 10.1177/15563316231209500  0.071
2013 Zhu XH, Chen JM, Tu TW, Chen W, Song SK. Simultaneous and noninvasive imaging of cerebral oxygen metabolic rate, blood flow and oxygen extraction fraction in stroke mice. Neuroimage. 64: 437-47. PMID 23000789 DOI: 10.1016/J.Neuroimage.2012.09.028  0.071
2023 Darrah KE, Albright S, Kumbhare R, Tsang M, Chen JK, Deiters A. Antisense Oligonucleotide Activation via Enzymatic Antibiotic Resistance Mechanism. Acs Chemical Biology. PMID 37326511 DOI: 10.1021/acschembio.3c00027  0.071
2019 Gwosdz J, Rosinski A, Chakrabarti M, Woodall BM, Elena N, McGahan PJ, Chen JL. Osteochondral Allograft Transplantation of the Medial Femoral Condyle With Orthobiologic Augmentation and Graft-Recipient Microfracture Preparation. Arthroscopy Techniques. 8: e321-e329. PMID 31016129 DOI: 10.1016/j.eats.2018.11.008  0.071
2016 Wang B, Zhang Y, Cao W, Wei X, Chen J, Ying W. SIRT2 Plays Significant Roles in Lipopolysaccharides-Induced Neuroinflammation and Brain Injury in Mice. Neurochemical Research. PMID 27350577 DOI: 10.1007/S11064-016-1981-2  0.071
2018 Elena N, Woodall BM, Mirvish A, Brown CM, McGahan PJ, Pathare NP, Shin EC, Chen JL. The Tibial Tug Test: An Intraoperative Test to Assess Tibial Fixation During Anterior Cruciate Ligament Reconstruction. Arthroscopy Techniques. 7: e853-e857. PMID 30167364 DOI: 10.1016/j.eats.2018.04.009  0.071
2002 Chen JL, Kodagoda D, Lawrence AM, Kerndt PR. Rapid public health interventions in response to an outbreak of syphilis in Los Angeles Sexually Transmitted Diseases. 29: 277-284. PMID 11984444  0.071
2005 Shi L, Tong W, Fang H, Scherf U, Han J, Puri RK, Frueh FW, Goodsaid FM, Guo L, Su Z, Han T, Fuscoe JC, Xu ZA, Patterson TA, Hong H, ... ... Chen JJ, et al. Cross-platform comparability of microarray technology: intra-platform consistency and appropriate data analysis procedures are essential. Bmc Bioinformatics. 6: S12. PMID 16026597 DOI: 10.1186/1471-2105-6-S2-S12  0.07
2010 Gibb B, Gupta K, Ghosh K, Sharp R, Chen J, Van Duyne GD. Requirements for catalysis in the Cre recombinase active site. Nucleic Acids Research. 38: 5817-32. PMID 20462863 DOI: 10.1093/Nar/Gkq384  0.07
2004 Hsueh HM, Chen JJ, Kodell RL. Comparison of methods for estimating the number of true null hypotheses in multiplicity testing. Journal of Biopharmaceutical Statistics. 13: 675-89. PMID 14584715 DOI: 10.1081/BIP-120024202  0.07
2013 Lee Y, Li H, Li J, Rebman E, Achour I, Regan KE, Gamazon ER, Chen JL, Yang XH, Cox NJ, Lussier YA. Network models of genome-wide association studies uncover the topological centrality of protein interactions in complex diseases. Journal of the American Medical Informatics Association : Jamia. 20: 619-29. PMID 23355459 DOI: 10.1136/Amiajnl-2012-001519  0.07
2017 Kang JY, Olinares PD, Chen J, Campbell EA, Mustaev A, Chait BT, Gottesman ME, Darst SA. Structural basis of transcription arrest by coliphage HK022 nun in an Escherichia coli RNA polymerase elongation complex. Elife. 6. PMID 28318486 DOI: 10.7554/Elife.25478  0.07
2004 White KL, Chen JM, Margot NA, Wrin T, Petropoulos CJ, Naeger LK, Swaminathan S, Miller MD. Molecular mechanisms of tenofovir resistance conferred by human immunodeficiency virus type 1 reverse transcriptase containing a diserine insertion after residue 69 and multiple thymidine analog-associated mutations. Antimicrobial Agents and Chemotherapy. 48: 992-1003. PMID 14982794 DOI: 10.1128/AAC.48.3.992-1003.2004  0.07
2015 Chen JX, Guzzo TJ, Malkowicz SB, Soulen MC, Wein AJ, Clark TW, Nadolski GJ, Stavropoulos SW. Complication and Readmission Rates following Same-Day Discharge after Percutaneous Renal Tumor Ablation. Journal of Vascular and Interventional Radiology : Jvir. PMID 26547122 DOI: 10.1016/j.jvir.2015.09.007  0.07
2021 Malone B, Chen J, Wang Q, Llewellyn E, Choi YJ, Olinares PDB, Cao X, Hernandez C, Eng ET, Chait BT, Shaw DE, Landick R, Darst SA, Campbell EA. Structural basis for backtracking by the SARS-CoV-2 replication-transcription complex. Biorxiv : the Preprint Server For Biology. PMID 33758867 DOI: 10.1101/2021.03.13.435256  0.07
2021 Speece NJ, Xu M, Tinoco G, Liebner DA, Chen JL. Randomized Prospective Trial Exploring the Impact of Structured Journaling in Patients With Sarcoma on the Management of Treatment-Related Adverse Events. Jco Oncology Practice. OP2100309. PMID 34559571 DOI: 10.1200/OP.21.00309  0.07
2017 Snyder VS, Chen JY, Hansen LA. Ruptured Dural Arteriovenous Fistula/Malformation. Academic Forensic Pathology. 7: 299-311. PMID 31239979 DOI: 10.23907/2017.027  0.07
2015 Sborov D, Chen JL. Targeted therapy in sarcomas other than GIST tumors. Journal of Surgical Oncology. 111: 632-40. PMID 25330750 DOI: 10.1002/jso.23802  0.07
2006 Chen JJ, Moon H, Kodell RL. A probabilistic framework for non-cancer risk assessment. Regulatory Toxicology and Pharmacology : Rtp. 48: 45-50. PMID 17166641 DOI: 10.1016/j.yrtph.2006.10.008  0.07
2004 Chen JJ, Delongchamp RR, Tsai CA, Hsueh HM, Sistare F, Thompson KL, Desai VG, Fuscoe JC. Analysis of variance components in gene expression data. Bioinformatics (Oxford, England). 20: 1436-46. PMID 14962916 DOI: 10.1093/Bioinformatics/Bth118  0.07
2019 Stover DG, Reinbolt RE, Adams EJ, Asad S, Tolliver K, Abdel-Rasoul M, Timmers CD, Gillespie S, Chen JL, Ali SM, Collier KA, Cherian MA, Noonan AM, Sardesai S, VanDeusen J, et al. Prospective Decision Analysis Study of Clinical Genomic Testing in Metastatic Breast Cancer: Impact on Outcomes and Patient Perceptions. Jco Precision Oncology. 3. PMID 32923860 DOI: 10.1200/PO.19.00090  0.07
2007 Chen JJ, Lee T, Delongchamp RR, Chen T, Tsai CA. Significance analysis of groups of genes in expression profiling studies. Bioinformatics (Oxford, England). 23: 2104-12. PMID 17553853 DOI: 10.1093/Bioinformatics/Btm310  0.07
2013 Chen JK, Du Bois J, Glenn J, Herschlag D, Khosla C. The Stanford Institute for Chemical Biology. Acs Chemical Biology. 8: 1860-1. PMID 24053754 DOI: 10.1021/Cb400641U  0.07
2017 Cho U, Riordan DP, Ciepla P, Kocherlakota KS, Chen JK, Harbury PB. Ultrasensitive optical imaging with lanthanide lumiphores. Nature Chemical Biology. PMID 29106397 DOI: 10.1038/Nchembio.2513  0.07
2018 Gamboa JT, Shin EC, Pathare NP, McGahan PJ, Chen JL. Graft Retensioning Technique Using an Adjustable-Loop Fixation Device in Arthroscopic Anterior Cruciate Ligament Reconstruction. Arthroscopy Techniques. 7: e185-e191. PMID 29552485 DOI: 10.1016/j.eats.2017.08.067  0.07
2018 Fay JF, Aleksandrov LA, Jensen T, Cui L, Kousouros JN, He L, Aleksandrov AA, Gingerich D, Riordan JR, Chen J. Cryo-EM visualization of an active high open probability CFTR anion channel. Biochemistry. PMID 30281975 DOI: 10.1021/acs.biochem.8b00763  0.069
2024 Huang HT, Lumpkin RJ, Tsai RW, Su S, Zhao X, Xiong Y, Chen J, Mageed N, Donovan KA, Fischer ES, Sellers WR. Ubiquitin-specific proximity labeling for the identification of E3 ligase substrates. Nature Chemical Biology. PMID 38514884 DOI: 10.1038/s41589-024-01590-9  0.069
2011 Zhang F, Lanning C, Mazzaro L, Barker AJ, Gates PE, Strain WD, Fulford J, Gosling OE, Shore AC, Bellenger NG, Rech B, Chen J, Chen J, Shandas R. In vitro and preliminary in vivo validation of echo particle image velocimetry in carotid vascular imaging. Ultrasound in Medicine & Biology. 37: 450-64. PMID 21316562 DOI: 10.1016/J.Ultrasmedbio.2010.11.017  0.069
2019 Youn GM, Rosinski A, Gwosdz J, Chakrabarti M, Elena N, Woodall BM, Shimizu M, McGahan PJ, Chen JL. Arthroscopic-Assisted Osteochondral Allograft Transplantation for Posterolateral Lesions of the Talus Without Fibular Osteotomy. Arthroscopy Techniques. 8: e311-e316. PMID 31016127 DOI: 10.1016/j.eats.2018.11.009  0.069
2020 Chen JX, Stavropoulos SW. Type 2 Endoleak Management. Seminars in Interventional Radiology. 37: 365-370. PMID 33071447 DOI: 10.1055/s-0040-1715873  0.069
2016 Chen JX, Rose S, White SB, El-Haddad G, Fidelman N, Yarmohammadi H, Hwang W, Sze DY, Kothary N, Stashek K, Wileyto EP, Salem R, Metz DC, Soulen MC. Embolotherapy for Neuroendocrine Tumor Liver Metastases: Prognostic Factors for Hepatic Progression-Free Survival and Overall Survival. Cardiovascular and Interventional Radiology. PMID 27738818 DOI: 10.1007/s00270-016-1478-z  0.069
2011 Henderson R, Chen S, Chen JZ, Grigorieff N, Passmore LA, Ciccarelli L, Rubinstein JL, Crowther RA, Stewart PL, Rosenthal PB. Tilt-pair analysis of images from a range of different specimens in single-particle electron cryomicroscopy. Journal of Molecular Biology. 413: 1028-46. PMID 21939668 DOI: 10.1016/J.Jmb.2011.09.008  0.069
2021 Kim JY, Park J, Kim DH, Gardner B, Jenkins S, McGahan P, Chen JL. Revision Anterior Cruciate Ligament Reconstruction: Tibial Tunnel-First Graft-Sizing Technique. Arthroscopy Techniques. 10: e2797-e2803. PMID 35004163 DOI: 10.1016/j.eats.2021.08.017  0.069
2013 Brookmire L, Chen JJ, Levy DD. Evaluation of the highest concentrations used in the in vitro chromosome aberrations assay. Environmental and Molecular Mutagenesis. 54: 36-43. PMID 23076808 DOI: 10.1002/em.21738  0.069
2022 Chen J, Wang Q, Malone B, Llewellyn E, Pechersky Y, Maruthi K, Eng ET, Perry JK, Campbell EA, Shaw DE, Darst SA. Ensemble cryo-EM reveals conformational states of the nsp13 helicase in the SARS-CoV-2 helicase replication-transcription complex. Nature Structural & Molecular Biology. 29: 250-260. PMID 35260847 DOI: 10.1038/s41594-022-00734-6  0.068
2024 Kahne SC, Yoo JH, Chen J, Nakedi K, Iyer LM, Putzel G, Samhadaneh NM, Pironti A, Aravind L, Ekiert DC, Bhabha G, Rhee KY, Darwin KH. Identification of a proteolysis regulator for an essential enzyme in . Biorxiv : the Preprint Server For Biology. PMID 38585835 DOI: 10.1101/2024.03.29.587195  0.068
2022 Gounder MM, Razak AA, Somaiah N, Chawla S, Martin-Broto J, Grignani G, Schuetze SM, Vincenzi B, Wagner AJ, Chmielowski B, Jones RL, Riedel RF, Stacchiotti S, Loggers ET, Ganjoo KN, ... ... Chen JL, et al. Selinexor in Advanced, Metastatic Dedifferentiated Liposarcoma: A Multinational, Randomized, Double-Blind, Placebo-Controlled Trial. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. JCO2101829. PMID 35394800 DOI: 10.1200/JCO.21.01829  0.068
2009 Kodell RL, Pearce BA, Baek S, Moon H, Ahn H, Young JF, Chen JJ. A model-free ensemble method for class prediction with application to biomedical decision making. Artificial Intelligence in Medicine. 46: 267-76. PMID 19081231 DOI: 10.1016/J.Artmed.2008.11.001  0.067
2017 Liu J, Zhang C, Zhao Y, Yue X, Wu H, Huang S, Chen J, Tomsky K, Xie H, Khella CA, Gatza ML, Xia D, Gao J, White E, Haffty BG, et al. Parkin targets HIF-1α for ubiquitination and degradation to inhibit breast tumor progression. Nature Communications. 8: 1823. PMID 29180628 DOI: 10.1038/s41467-017-01947-w  0.067
2006 White KL, Chen JM, Feng JY, Margot NA, Ly JK, Ray AS, Macarthur HL, McDermott MJ, Swaminathan S, Miller MD. The K65R reverse transcriptase mutation in HIV-1 reverses the excision phenotype of zidovudine resistance mutations. Antiviral Therapy. 11: 155-63. PMID 16640096  0.067
2015 Langevin JP, Koek RJ, Schwartz HN, Chen JW, Sultzer DL, Mandelkern MA, Kulick AD, Krahl SE. Deep Brain Stimulation of the Basolateral Amygdala for Treatment-Refractory Posttraumatic Stress Disorder. Biological Psychiatry. PMID 26475671 DOI: 10.1016/j.biopsych.2015.09.003  0.067
2024 Selby LV, Clark EC, Liebner DA, Chen JL, Tinoco G, Bashian E, Beane JD, Pollock RE, Grignol VP. ASO Visual Abstract: Adjuvant Palbociclib May be Associated with Delayed Recurrence in Completely Resected Retroperitoneal Liposarcoma: Results of a Single-Institution Retrospective Cohort Study. Annals of Surgical Oncology. PMID 38273174 DOI: 10.1245/s10434-023-13830-8  0.067
2017 Ma M, Chen JY, Plowey ED, Fischbein N, Iv M. Tumefactive demyelination associated with developmental venous anomaly: Report of two cases. Clinical Imaging. 43: 194-198. PMID 28364723 DOI: 10.1016/J.Clinimag.2017.02.012  0.067
2021 Wang H, Chen J, Jandu S, Melucci S, Savage W, Nandakumar K, Kang SK, Barreto-Ortiz S, Poe A, Rastogi S, Bauer M, Steppan J, Santhanam L. Probing tissue transglutaminase mediated vascular smooth muscle cell aging using a novel transamidation-deficient Tgm2-C277S mouse model. Cell Death Discovery. 7: 197. PMID 34326316 DOI: 10.1038/s41420-021-00543-8  0.066
2003 Chen JY, Brunauer LS, Chu FC, Helsel CM, Gedde MM, Huestis WH. Selective amphipathic nature of chlorpromazine binding to plasma membrane bilayers Biochimica Et Biophysica Acta - Biomembranes. 1616: 95-105. PMID 14507423 DOI: 10.1016/S0005-2736(03)00229-3  0.066
2010 Bilello M, Suri N, Krejza J, Woo JH, Bagley LJ, Mamourian AC, Vossough A, Chen JY, Millian BR, Mulderink T, Markowitz CE, Melhem ER. An approach to comparing accuracies of two FLAIR MR sequences in the detection of multiple sclerosis lesions in the brain in the absence of gold standard. Academic Radiology. 17: 686-95. PMID 20457413 DOI: 10.1016/j.acra.2010.01.019  0.066
2012 Lin WJ, Chen JJ. Class-imbalanced classifiers for high-dimensional data. Briefings in Bioinformatics. 14: 13-26. PMID 22408190 DOI: 10.1093/bib/bbs006  0.066
2004 Chen W, Ren XR, Nelson CD, Barak LS, Chen JK, Beachy PA, de Sauvage F, Lefkowitz RJ. Activity-dependent internalization of smoothened mediated by beta-arrestin 2 and GRK2. Science (New York, N.Y.). 306: 2257-60. PMID 15618519 DOI: 10.1126/Science.1104135  0.066
2013 Andersen KR, Onischenko E, Tang JH, Kumar P, Chen JZ, Ulrich A, Liphardt JT, Weis K, Schwartz TU. Scaffold nucleoporins Nup188 and Nup192 share structural and functional properties with nuclear transport receptors. Elife. 2: e00745. PMID 23795296 DOI: 10.7554/Elife.00745  0.065
2004 Lew HL, Lee J, Chen JL, Chen SC. Complementary and alternative medicine education in the United States, China, and Taiwan. Physical Medicine and Rehabilitation Clinics of North America. 15: 933-42, viii-ix. PMID 15458760 DOI: 10.1016/S1047-9651(03)00129-3  0.065
2015 Davis E, Chen J, Leon K, Darst SA, Campbell EA. Mycobacterial RNA polymerase forms unstable open promoter complexes that are stabilized by CarD. Nucleic Acids Research. 43: 433-45. PMID 25510492 DOI: 10.1093/Nar/Gku1231  0.065
2023 Fong S, Wu D, Reed L, Cheng S, Cantave K, Chen H, McGahan P, Chen JL. Biceps femoris accessory tendon tenodesis: A case report. Clinical Case Reports. 11: e7984. PMID 37822483 DOI: 10.1002/ccr3.7984  0.065
2023 Ayat P, Alam S, Capric V, Chen J, McFarlane SI. Syndrome of Inappropriate Secretion of Antidiuretic Hormone (SIADH) With Severe Hyponatremia As the Initial and Sole Presentation of COVID-19 Infection: A Case Report and Pathophysiologic Insights. Cureus. 15: e34161. PMID 36843814 DOI: 10.7759/cureus.34161  0.064
2011 Hruby G, Chen JY, Bucci J, Loadsman JA, Perry P, Stockler MR. Patients' experiences of high-dose-rate brachytherapy boost for prostate cancer using an inpatient protocol. Brachytherapy. 10: 395-400. PMID 21345743 DOI: 10.1016/j.brachy.2011.01.008  0.064
2010 Fang H, Xu J, Ding D, Jackson SA, Patel IR, Frye JG, Zou W, Nayak R, Foley S, Chen J, Su Z, Ye Y, Turner S, Harris S, Zhou G, et al. An FDA bioinformatics tool for microbial genomics research on molecular characterization of bacterial foodborne pathogens using microarrays. Bmc Bioinformatics. 11: S4. PMID 20946615 DOI: 10.1186/1471-2105-11-S6-S4  0.064
2002 Feng Z, Hu W, Chen JX, Pao A, Li H, Rom W, Hung MC, Tang MS. Preferential DNA damage and poor repair determine ras gene mutational hotspot in human cancer. Journal of the National Cancer Institute. 94: 1527-36. PMID 12381705 DOI: 10.1093/jnci/94.20.1527  0.064
2018 Lee UJ, Tzeng S, Chen YC, Chen JJ. Prognostic and predictive signatures for treatment decisions. Biomarkers in Medicine. PMID 30022678 DOI: 10.2217/bmm-2017-0320  0.064
2021 Lendvay TS, Chen J, Harcourt BH, Scholte FE, Lin YL, Kilinc-Balci FS, Lamb MM, Homdayjanakul K, Cui Y, Price A, Heyne B, Sahni J, Kabra KB, Lin YC, Evans D, et al. Addressing Personal Protective Equipment (PPE) Decontamination: Methylene Blue and Light Inactivates SARS-CoV-2 on N95 Respirators and Medical Masks with Maintenance of Integrity and Fit. Infection Control and Hospital Epidemiology. 1-83. PMID 34016200 DOI: 10.1017/ice.2021.230  0.064
2011 Chae M, Chen JJ. Reordering hierarchical tree based on bilateral symmetric distance. Plos One. 6: e22546. PMID 21829631 DOI: 10.1371/journal.pone.0022546  0.064
2020 Alvarez A, Youn GM, Remigio Van Gogh AM, Shin Yin SS, Chakrabarti MO, McGahan PJ, Chen JL. Tibial Plateau With Arthroscopic Reduction-Internal Fixation. Arthroscopy Techniques. 9: e213-e216. PMID 32099774 DOI: 10.1016/j.eats.2019.09.023  0.064
2022 Chen TL, Chen JC, Chang WH, Tsai W, Shih MC, Wildan Nabila A. Imbalanced Prediction of Emergency Department Admission Using Natural Language Processing and Deep Neural Network. Journal of Biomedical Informatics. 104171. PMID 35995106 DOI: 10.1016/j.jbi.2022.104171  0.064
2022 Schorer AE, Moldwin R, Koskimaki J, Bernstam EV, Venepalli NK, Miller RS, Chen JL. Chasm Between Cancer Quality Measures and Electronic Health Record Data Quality. Jco Clinical Cancer Informatics. 6: e2100128. PMID 34985912 DOI: 10.1200/CCI.21.00128  0.064
2020 Cho U, Chen JK. Lanthanide-Based Optical Probes of Biological Systems. Cell Chemical Biology. PMID 32735780 DOI: 10.1016/J.Chembiol.2020.07.009  0.063
2022 Wang L, Wei L, Zhang S, Cheng L, Shendre A, Carson W, Chen JL, Owen D, Gregory M, Li L. An Informatics Bridge to Improve the Design and Efficiency of Phase I Clinical Trials for Anticancer Drug Combinations. Cancer Research Communications. 2: 929-936. PMID 36922938 DOI: 10.1158/2767-9764.CRC-22-0160  0.063
2017 Barreto Ortiz S, Hori D, Nomura Y, Yun X, Jiang H, Yong H, Chen J, Paek S, Pandey D, Sikka G, Bhatta A, Gillard A, Steppan J, Kim JH, Adachi H, et al. Opsin 3 and 4 Mediate Light-Induced Pulmonary Vasorelaxation that is Potentiated by G-Protein Receptor Kinase 2 Inhibition. American Journal of Physiology. Lung Cellular and Molecular Physiology. ajplung.00091.2017. PMID 28882814 DOI: 10.1152/Ajplung.00091.2017  0.063
2024 Laudanski K, Mahmoud MA, Ahmed AS, Susztak K, Mathew A, Chen J. Immunological Signatures in Blood and Urine in 80 Individuals Hospitalized during the Initial Phase of COVID-19 Pandemic with Quantified Nicotine Exposure. International Journal of Molecular Sciences. 25. PMID 38612525 DOI: 10.3390/ijms25073714  0.063
2012 Chen JX, Gottschalk A, Kathuria S, Gandhi D. Undulating microcatheter tip motion with respiratory cycle during intracranial aneurysm embolization: description of a case and strategy for its mitigation. Journal of Neurointerventional Surgery. 4: e8. PMID 21990517 DOI: 10.1136/neurintsurg-2011-010060  0.063
2009 Chen JZ, Settembre EC, Aoki ST, Zhang X, Bellamy AR, Dormitzer PR, Harrison SC, Grigorieff N. Molecular interactions in rotavirus assembly and uncoating seen by high-resolution cryo-EM. Proceedings of the National Academy of Sciences of the United States of America. 106: 10644-8. PMID 19487668 DOI: 10.1073/Pnas.0904024106  0.063
2014 Zhao W, Zou W, Chen JJ. Topic modeling for cluster analysis of large biological and medical datasets. Bmc Bioinformatics. 15: S11. PMID 25350106 DOI: 10.1186/1471-2105-15-S11-S11  0.062
2013 Zou W, Chen HC, Hise KB, Tang H, Foley SL, Meehan J, Lin WJ, Nayak R, Xu J, Fang H, Chen JJ. Meta-analysis of pulsed-field gel electrophoresis fingerprints based on a constructed Salmonella database. Plos One. 8: e59224. PMID 23516614 DOI: 10.1371/journal.pone.0059224  0.062
2024 Guzman A, Williams N, Dela Rueda T, Xiao E, Caliman A, Chen JL, McGahan PJ. Atraumatic intra-articular, extra-synovial ganglion cyst of the lateral knee deep to the iliotibial band: A case report and review of the literature. Clinical Case Reports. 12: e8501. PMID 38374881 DOI: 10.1002/ccr3.8501  0.062
2005 Shaikh TR, Thomas DR, Chen JZ, Samatey FA, Matsunami H, Imada K, Namba K, Derosier DJ. A partial atomic structure for the flagellar hook of Salmonella typhimurium. Proceedings of the National Academy of Sciences of the United States of America. 102: 1023-8. PMID 15657146 DOI: 10.1073/Pnas.0409020102  0.062
2014 Burke ZD, Chen JB, Conceicao C, Hoffman RM, Miller LT, Taela A, DeUgarte DA. Evaluation of preoperative and intraoperative red blood cell transfusion practices at Maputo Central Hospital, Mozambique. Transfusion. 54: 42-8. PMID 23692441 DOI: 10.1111/Trf.12252  0.061
2009 Martin AE, Chen JY, Muratore CS, Mayo-Smith WW, Luks FI. Dual localization technique for thoracoscopic resection of lung lesions in children. Journal of Laparoendoscopic & Advanced Surgical Techniques. Part A. 19: S161-4. PMID 18999984 DOI: 10.1089/lap.2008.0143  0.061
2014 Spokoyny I, Raman R, Ernstrom K, Demaerschalk BM, Lyden PD, Hemmen TM, Guzik AK, Chen JY, Meyer BC. Pooled assessment of computed tomography interpretation by vascular neurologists in the STRokE DOC telestroke network. Journal of Stroke and Cerebrovascular Diseases : the Official Journal of National Stroke Association. 23: 511-5. PMID 23697761 DOI: 10.1016/J.Jstrokecerebrovasdis.2013.04.023  0.061
2011 Chen JJ. Consistency of predictive signature genes and classifiers. Pharmacogenomics. 12: 461-3. PMID 21521018 DOI: 10.2217/pgs.11.26  0.061
2008 Chen JZ, Sachse C, Xu C, Mielke T, Spahn CM, Grigorieff N. A dose-rate effect in single-particle electron microscopy. Journal of Structural Biology. 161: 92-100. PMID 17977018 DOI: 10.1016/J.Jsb.2007.09.017  0.06
2011 Lussier YA, Chen JL. The emergence of genome-based drug repositioning. Science Translational Medicine. 3: 96ps35. PMID 21849663 DOI: 10.1126/Scitranslmed.3001512  0.06
2002 Ba AM, Guiou M, Pouratian N, Muthialu A, Rex DE, Cannestra AF, Chen JW, Toga AW. Multiwavelength optical intrinsic signal imaging of cortical spreading depression. Journal of Neurophysiology. 88: 2726-35. PMID 12424307 DOI: 10.1152/Jn.00729.2001  0.06
2022 Chen JB, Diane A, Lyman S, Chiu YF, Blevins JL, Westrich GH. Predicting Implant Size in Total Hip Arthroplasty. Arthroplasty Today. 15: 210-214.e0. PMID 35774896 DOI: 10.1016/j.artd.2022.02.018  0.06
2006 Movassaghi B, Schaefer D, Grass M, Rasche V, Wink O, Garcia JA, Chen JY, Messenger JC, Carroll JD. 3D reconstruction of coronary stents in vivo based on motion compensated X-ray angiograms. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 9: 177-84. PMID 17354770 DOI: 10.1007/11866763_22  0.06
2023 Williams NR, Yin S, Guzman AJ, Waldron P, Vallelanes E, Shin C, Chen JL. Tibial Spine Avulsion Repair With FiberRing Suture and Anterior Cruciate Ligament Repair TightRope. Arthroscopy Techniques. 12: e2381-e2385. PMID 38196861 DOI: 10.1016/j.eats.2023.08.008  0.06
2003 Pizer SM, Fletcher PT, Joshi S, Thall A, Chen JZ, Fridman Y, Fritsch DS, Gash G, Glotzer JM, Jiroutek MR, Lu C, Muller KE, Tracton G, Yushkevich P, Chaney EL. Deformable M-Reps for 3D Medical Image Segmentation. International Journal of Computer Vision. 55: 85-106. PMID 23825898 DOI: 10.1023/A:1026313132218  0.06
2011 Mattison DR, Plant TM, Lin HM, Chen HC, Chen JJ, Twaddle NC, Doerge D, Slikker W, Patton RE, Hotchkiss CE, Callicott RJ, Schrader SM, Turner TW, Kesner JS, Vitiello B, et al. Pubertal delay in male nonhuman primates (Macaca mulatta) treated with methylphenidate. Proceedings of the National Academy of Sciences of the United States of America. 108: 16301-6. PMID 21930929 DOI: 10.1073/Pnas.1102187108  0.06
2021 Bazarian JJ, Welch RD, Caudle K, Jeffrey CA, Chen JY, Chandran R, McCaw T, Datwyler SA, Zhang H, McQuiston B. Accuracy of a rapid GFAP/UCH-L1 test for the prediction of intracranial injuries on head CT after mild traumatic brain injury. Academic Emergency Medicine : Official Journal of the Society For Academic Emergency Medicine. PMID 34358399 DOI: 10.1111/acem.14366  0.06
2003 Phillips KA, Bayer R, Chen JL. New Centers for Disease Control and Prevention's guidelines on HIV counseling and testing for the general population and pregnant women. Journal of Acquired Immune Deficiency Syndromes (1999). 32: 182-91. PMID 12571528 DOI: 10.1097/00126334-200302010-00010  0.059
2023 Buchan GBJ, Hecht CJ, Sculco PK, Chen JB, Kamath AF. Improved short-term outcomes for a novel, fluoroscopy-based robotic-assisted total hip arthroplasty system compared to manual technique with fluoroscopic assistance. Archives of Orthopaedic and Trauma Surgery. PMID 37740783 DOI: 10.1007/s00402-023-05061-z  0.059
2018 Bazarian JJ, Biberthaler P, Welch RD, Lewis LM, Barzo P, Bogner-Flatz V, Gunnar Brolinson P, Büki A, Chen JY, Christenson RH, Hack D, Huff JS, Johar S, Jordan JD, Leidel BA, et al. Serum GFAP and UCH-L1 for prediction of absence of intracranial injuries on head CT (ALERT-TBI): a multicentre observational study. The Lancet. Neurology. PMID 30054151 DOI: 10.1016/S1474-4422(18)30231-X  0.059
2020 Neto AFG, Ramos TRR, Sousa BSM, Sena RC, Chen J, Andrade-Filho T, Neto AMJC. Effect of the Electric Field on DNA Bases as Pigments for Nanodevices: A First-Principles Study. Journal of Nanoscience and Nanotechnology. 20: 2603-2610. PMID 31492283 DOI: 10.1166/jnn.2020.17305  0.059
2009 Morris SM, Dobrovolsky VN, Shaddock JG, Mittelstaedt RA, Bishop ME, Manjanatha MG, Shelton SD, Doerge DR, Twaddle NC, Chen JJ, Lin CJ, Paule MG, Slikker W, Hotchkiss CE, Petibone D, et al. The genetic toxicology of methylphenidate hydrochloride in non-human primates. Mutation Research. 673: 59-66. PMID 19135169 DOI: 10.1016/J.Mrgentox.2008.12.001  0.059
2006 Moon H, Kim HJ, Chen JJ, Kodell RL. Model averaging using the Kullback information criterion in estimating effective doses for microbial infection and illness. Risk Analysis : An Official Publication of the Society For Risk Analysis. 25: 1147-59. PMID 16297221 DOI: 10.1111/j.1539-6924.2005.00676.x  0.059
2004 Nemoto M, Sheth S, Guiou M, Pouratian N, Chen JW, Toga AW. Functional signal- and paradigm-dependent linear relationships between synaptic activity and hemodynamic responses in rat somatosensory cortex. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 24: 3850-61. PMID 15084666 DOI: 10.1523/Jneurosci.4870-03.2004  0.059
2011 Chen J, Gailloud P. Safety of spinal angiography: complication rate analysis in 302 diagnostic angiograms. Neurology. 77: 1235-40. PMID 21917768 DOI: 10.1212/WNL.0b013e3182302068  0.059
2011 Chen JY, Hruby G, Stockler MR, Patanjali N, Bucci J, Perez G, Loadsman JA, Sheehan E. Patient-reported outcomes of prostate high-dose-rate brachytherapy boost comparing an outpatient and inpatient protocol: a two-center chronologic cohort study. Brachytherapy. 10: 454-60. PMID 21550317 DOI: 10.1016/j.brachy.2011.03.002  0.058
2004 Duncan T, Chen JM, Friedman FK, Hyde M, Chie L, Pincus MR. Comparison of molecular dynamics averaged structures for complexes of normal and oncogenic ras-p21 with SOS nucleotide exchange protein, containing computed conformations for three crystallographically undefined domains, suggests a potential role of these domains in ras signaling. The Protein Journal. 23: 217-28. PMID 15200053 DOI: 10.1023/B:Jopc.0000026417.72621.1F  0.058
2021 Xu J, Zheng X, Feng Z, Lu Z, Zhang Z, Huang W, Li Y, Vuckovic D, Li Y, Dai S, Chen G, Wang K, Wang H, Chen JK, Mitch W, et al. Organic wastewater treatment by a single-atom catalyst and electrolytically produced HO. Nature Sustainability. 4: 233-241. PMID 34355066 DOI: 10.1038/s41893-020-00635-w  0.058
2017 Chen J, Wassarman KM, Feng S, Leon K, Feklistov A, Winkelman JT, Li Z, Walz T, Campbell EA, Darst SA. 6S RNA Mimics B-Form DNA to Regulate Escherichia coli RNA Polymerase. Molecular Cell. PMID 28988932 DOI: 10.1016/J.Molcel.2017.09.006  0.058
2017 Gamboa JT, Durrant BA, Pathare NP, Shin EC, Chen JL. Arthroscopic Reduction of Tibial Spine Avulsion: Suture Lever Reduction Technique. Arthroscopy Techniques. 6: e121-e126. PMID 28373949 DOI: 10.1016/j.eats.2016.09.010  0.058
2003 Ma DH, See LC, Chen JJ. Long-term observation of aqueous flare following penetrating keratoplasty. Cornea. 22: 413-9. PMID 12827045 DOI: 10.1097/00003226-200307000-00005  0.058
2012 Eno JJ, Chen JL, Mitsunaga MM. Short same-segment fixation of thoracolumbar burst fractures. Hawai'I Journal of Medicine & Public Health : a Journal of Asia Pacific Medicine & Public Health. 71: 19-22. PMID 22413100  0.058
2013 Estrozi LF, Settembre EC, Goret G, McClain B, Zhang X, Chen JZ, Grigorieff N, Harrison SC. Location of the dsRNA-dependent polymerase, VP1, in rotavirus particles. Journal of Molecular Biology. 425: 124-32. PMID 23089332 DOI: 10.1016/J.Jmb.2012.10.011  0.058
2022 Bernstam EV, Warner JL, Krauss JC, Ambinder E, Rubinstein WS, Komatsoulis G, Miller RS, Chen JL. Quantitating and assessing interoperability between electronic health records. Journal of the American Medical Informatics Association : Jamia. PMID 35015861 DOI: 10.1093/jamia/ocab289  0.058
2011 Lin WJ, Chen JJ. An approach to identifying preclinical biomarkers of susceptibility to drug-induced toxicity. Pharmacogenomics. 12: 493-501. PMID 21521022 DOI: 10.2217/pgs.10.204  0.057
2022 Ferguson S, Lai K, Chen J, Faidi S, Leonardo K, Olechowski A. "Why couldn't we do this more often?": exploring the feasibility of virtual and distributed work in product design engineering. Research in Engineering Design. 1-24. PMID 35756153 DOI: 10.1007/s00163-022-00391-2  0.057
2021 Guzman AJ, Dela Rueda T, Rayos Del Sol SM, Bryant SA, Jenkins S, Gardner B, McGahan PJ, Chen JL. Arthroscopic Osteochondral Autograft Transfer System Procedure of the Lateral Femoral Condyle with Donor-Site Backfill Using Osteochondral Allograft Plug. Arthroscopy Techniques. 10: e2683-e2689. PMID 35004149 DOI: 10.1016/j.eats.2021.08.012  0.057
2008 Chen J, Ekker SC. Modulation of gene expression in the study of zebrafish development - A discussion with James Chen, Ph.D Zebrafish. 5: 93-96. PMID 18554172 DOI: 10.1089/Zeb.2008.9993  0.057
2018 Yu PY, Lopez G, Braggio D, Koller D, Bill KLJ, Prudner BC, Zewdu A, Chen JL, Iwenofu OH, Lev D, Strohecker AM, Fenger JM, Pollock RE, Guttridge DC. miR-133a function in the pathogenesis of dedifferentiated liposarcoma. Cancer Cell International. 18: 89. PMID 29983640 DOI: 10.1186/s12935-018-0583-2  0.057
2018 Madhavan S, Subramaniam S, Brown TD, Chen JL. Art and Challenges of Precision Medicine: Interpreting and Integrating Genomic Data Into Clinical Practice. American Society of Clinical Oncology Educational Book. American Society of Clinical Oncology. Annual Meeting. 546-553. PMID 30231369 DOI: 10.1200/EDBK_200759  0.057
2005 Moon H, Chen JJ, Gaylor DW, Kodell RL. A comparison of microbial dose-response models fitted to human data. Regulatory Toxicology and Pharmacology : Rtp. 40: 177-84. PMID 15450720 DOI: 10.1016/j.yrtph.2004.07.003  0.056
2023 Chen J, Ekiert DC. A tale of two inhibitors: diarylquinolines and squaramides. The Embo Journal. e114912. PMID 37435707 DOI: 10.15252/embj.2023114912  0.056
2017 Martin GM, Yoshioka C, Rex EA, Fay JF, Xie Q, Whorton MR, Chen JZ, Shyng SL. Cryo-EM structure of the ATP-sensitive potassium channel illuminates mechanisms of assembly and gating. Elife. 6. PMID 28092267 DOI: 10.7554/Elife.24149  0.056
2006 Jin H, Cai RZ, Schacherer L, Jabri S, Tsiang M, Fardis M, Chen X, Chen JM, Kim CU. Design, synthesis, and SAR studies of novel and highly active tri-cyclic HIV integrase inhibitors. Bioorganic & Medicinal Chemistry Letters. 16: 3989-92. PMID 16723225 DOI: 10.1016/j.bmcl.2006.05.016  0.056
2022 Chen JY, Vedantham S, Lexa FJ. Burnout and work-work imbalance in radiology- wicked problems on a global scale. A baseline pre-COVID-19 survey of US neuroradiologists compared to international radiologists and adjacent staff. European Journal of Radiology. 110153. PMID 35058099 DOI: 10.1016/j.ejrad.2022.110153  0.056
2004 Allen RH, Szabo RM, Chen JL. Outcome assessment of hand function after radial artery harvesting for coronary artery bypass. The Journal of Hand Surgery. 29: 628-37. PMID 15249087 DOI: 10.1016/J.JHSA.2004.04.013  0.056
2019 Chen JX, Levin LS, Mantell MP, Redmond JW, Clark TWI. Endovascular Therapy for Below-the-Elbow Arterial Disease: An Initial Single-Center Experience. Journal of Endovascular Therapy : An Official Journal of the International Society of Endovascular Specialists. 1526602819854167. PMID 31179815 DOI: 10.1177/1526602819854167  0.056
2007 Mackman RL, Zhang L, Prasad V, Boojamra CG, Chen J, Douglas J, Grant D, Laflamme G, Hui H, Kim CU, Parrish J, Stoycheva AD, Swaminathan S, Wang K, Cihlar T. Synthesis and anti-HIV activity of cyclic pyrimidine phosphonomethoxy nucleosides and their prodrugs: a comparison of phosphonates and corresponding nucleosides. Nucleosides, Nucleotides & Nucleic Acids. 26: 573-7. PMID 18066858 DOI: 10.1080/15257770701490126  0.056
2015 Bae B, Chen J, Davis E, Leon K, Darst SA, Campbell EA. CarD uses a minor groove wedge mechanism to stabilize the RNA polymerase open promoter complex. Elife. 4. PMID 26349034 DOI: 10.7554/Elife.08505  0.056
2004 Chen JJ. Microarrays in pharmacogenomics Journal of Biopharmaceutical Statistics. 14: 535-537. PMID 15468750 DOI: 10.1081/BIP-200025643  0.056
2013 Chen JK, Kikuchi K. Emerging technologies in molecular imaging: new windows into biology. Current Opinion in Chemical Biology. 17: 635-6. PMID 23886981 DOI: 10.1016/J.Cbpa.2013.07.001  0.055
2022 Lendvay TS, Xu J, Chen J, Clark T, Cui Y. Methylene blue applied to N95 respirators and medical masks for SARS-CoV-2 decontamination: What is the likelihood of inhaling methylene blue? American Journal of Infection Control. 50: 857-862. PMID 35908823 DOI: 10.1016/j.ajic.2022.03.003  0.055
2007 Lynn AM, Bradford H, Kantor ED, Seng KY, Salinger DH, Chen J, Ellenbogen RG, Vicini P, Anderson GD. Postoperative ketorolac tromethamine use in infants aged 6-18 months: the effect on morphine usage, safety assessment, and stereo-specific pharmacokinetics. Anesthesia and Analgesia. 104: 1040-51, tables of c. PMID 17456651 DOI: 10.1213/01.Ane.0000260320.60867.6C  0.055
2021 Chen JM, Zovko M, Šimurina N, Zovko V. Fear in a Handful of Dust: The Epidemiological, Environmental, and Economic Drivers of Death by PM Pollution. International Journal of Environmental Research and Public Health. 18. PMID 34444435 DOI: 10.3390/ijerph18168688  0.055
2017 Chick JFB, Reddy SN, Chen JX, Sammarco T, Chittams J, Trerotola SO. A randomized comparison between an intravenous catheter system with a retractable guidewire and conventional intravenous catheters. The Journal of Vascular Access. 0. PMID 28777421 DOI: 10.5301/jva.5000763  0.054
2004 Chen JM, Yeh LA. Structure-based development of a novel collagen inhibitor for MMP-1: re-designing the functions of a matrix protein. Frontiers in Bioscience : a Journal and Virtual Library. 9: 2788-95. PMID 15353314  0.054
2018 Chen JB, Hegde V, Cheung EC, Stavrakis AI, SooHoo NF. Who Cares for Total Hip Arthroplasty Complications? Rates of Readmission to a Hospital Different From the Location of the Index Procedure. The Journal of the American Academy of Orthopaedic Surgeons. PMID 30379760 DOI: 10.5435/JAAOS-D-18-00464  0.054
2007 Chen JZ, Grigorieff N. SIGNATURE: a single-particle selection system for molecular electron microscopy. Journal of Structural Biology. 157: 168-73. PMID 16870473 DOI: 10.1016/J.Jsb.2006.06.001  0.054
2021 Sumner RL, Chacko E, McMillan R, Spriggs MJ, Anderson C, Chen J, French A, Jung S, Rajan A, Malpas G, Hay J, Ponton R, Muthukumaraswamy SD, Sundram F. A qualitative and quantitative account of patient's experiences of ketamine and its antidepressant properties. Journal of Psychopharmacology (Oxford, England). 269881121998321. PMID 33781107 DOI: 10.1177/0269881121998321  0.054
2011 Chen JY, Seagull FJ, Nagy P, Lakhani P, Melhem ER, Siegel EL, Safdar NM. Computer input devices: neutral party or source of significant error in manual lesion segmentation? Journal of Digital Imaging. 24: 135-41. PMID 20049624 DOI: 10.1007/s10278-009-9258-9  0.054
2005 Chen MC, Lu PC, Chen JS, Hwang NH. Computational hemodynamics of an implanted coronary stent based on three-dimensional cine angiography reconstruction. Asaio Journal (American Society For Artificial Internal Organs : 1992). 51: 313-20. PMID 16156292 DOI: 10.1097/01.mat.0000169117.07070.fb  0.054
2002 Montgomery BA, Murphy J, Chen JJ, Desai VG, McGarrity L, Morris SM, Casciano DA, Aidoo A. Mutagenicity of food-derived carcinogens and the effect of antioxidant vitamins. Nutrition and Cancer. 43: 103-10. PMID 12467141 DOI: 10.1207/S15327914Nc431_12  0.054
2006 Prayson MJ, Chen JL, Hampers D, Vogt M, Fenwick J, Meredick R. Baseline compartment pressure measurements in isolated lower extremity fractures without clinical compartment syndrome. The Journal of Trauma. 60: 1037-40. PMID 16688067 DOI: 10.1097/01.TA.0000215444.05928.2F  0.054
2010 Mitchell ML, Son JC, Lee IY, Lee CK, Kim HS, Guo H, Wang J, Hayes J, Wang M, Paul A, Lansdon EB, Chen JM, Eisenberg G, Geleziunas R, Xu L, et al. N1-Heterocyclic pyrimidinediones as non-nucleoside inhibitors of HIV-1 reverse transcriptase. Bioorganic & Medicinal Chemistry Letters. 20: 1585-8. PMID 20137928 DOI: 10.1016/J.Bmcl.2010.01.086  0.054
2012 Chen HC, Kodell RL, Cheng KF, Chen JJ. Assessment of performance of survival prediction models for cancer prognosis. Bmc Medical Research Methodology. 12: 102. PMID 22824262 DOI: 10.1186/1471-2288-12-102  0.054
2018 Woodall BM, Elena N, Paborji D, Shin EC, Pathare N, McGahan PJ, Chen JL. Arthroscopic Remplissage Using a Double-Pulley System for Hill-Sachs Lesions for Recurrent Shoulder Instability. Arthroscopy Techniques. 7: e773-e777. PMID 30094150 DOI: 10.1016/j.eats.2018.03.013  0.053
2018 Woodall BM, Elena N, Paborji D, Shin EC, Pathare N, McGahan PJ, Chen JL. Arthroscopic Remplissage Using a Double-Pulley System for Hill-Sachs Lesions for Recurrent Shoulder Instability. Arthroscopy Techniques. 7: e773-e777. PMID 30094150 DOI: 10.1016/j.eats.2018.03.013  0.053
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