Claudia Bank - Publications

Affiliations: 
École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland 

31 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Amado A, Li J, Bank C. STUN: forward-time simulation on TUnable fitNess landscapes in recombining populations. Bioinformatics Advances. 3: vbad164. PMID 38075480 DOI: 10.1093/bioadv/vbad164  0.364
2023 Marrec L, Bank C. Evolutionary rescue in a fluctuating environment: periodic versus quasi-periodic environmental changes. Proceedings. Biological Sciences. 290: 20230770. PMID 37253425 DOI: 10.1098/rspb.2023.0770  0.421
2023 Li J, Amado A, Bank C. Rapid adaptation of recombining populations on tunable fitness landscapes. Molecular Ecology. PMID 36855836 DOI: 10.1111/mec.16900  0.407
2022 Lansch-Justen L, Cusseddu D, Schmitz MA, Bank C. The extinction time under mutational meltdown driven by high mutation rates. Ecology and Evolution. 12: e9046. PMID 35813923 DOI: 10.1002/ece3.9046  0.504
2021 Dias Louro MA, Bettencourt-Dias M, Bank C. Patterns of selection against centrosome amplification in human cell lines. Plos Computational Biology. 17: e1008765. PMID 33979341 DOI: 10.1371/journal.pcbi.1008765  0.351
2021 Berdan EL, Blanckaert A, Butlin RK, Bank C. Deleterious mutation accumulation and the long-term fate of chromosomal inversions. Plos Genetics. 17: e1009411. PMID 33661924 DOI: 10.1371/journal.pgen.1009411  0.358
2020 Cote-Hammarlof PA, Fragata I, Flynn J, Mavor D, Zeldovich KB, Bank C, Bolon DNA. The adaptive potential of the middle domain of yeast Hsp90. Molecular Biology and Evolution. PMID 32871012 DOI: 10.1093/molbev/msaa211  0.344
2020 Blanckaert A, Bank C, Hermisson J. The limits to parapatric speciation 3: evolution of strong reproductive isolation in presence of gene flow despite limited ecological differentiation. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 375: 20190532. PMID 32654650 DOI: 10.1098/Rstb.2019.0532  0.433
2020 Ramiro RS, Durão P, Bank C, Gordo I. Low mutational load and high mutation rate variation in gut commensal bacteria. Plos Biology. 18: e3000617. PMID 32155146 DOI: 10.1371/Journal.Pbio.3000617  0.549
2020 Flynn JM, Rossouw A, Cote-Hammarlof P, Fragata I, Mavor D, Hollins C, Bank C, Bolon DN. Comprehensive fitness maps of Hsp90 show widespread environmental dependence. Elife. 9. PMID 32129763 DOI: 10.7554/Elife.53810  0.395
2019 Nouhaud P, Blanckaert A, Bank C, Kulmuni J. Understanding Admixture: Haplodiploidy to the Rescue. Trends in Ecology & Evolution. PMID 31703819 DOI: 10.1016/J.Tree.2019.08.013  0.359
2019 Hall AE, Karkare K, Cooper VS, Bank C, Cooper TF, Moore FB. Environment changes epistasis to alter trade-offs along alternative evolutionary paths. Evolution; International Journal of Organic Evolution. PMID 31418459 DOI: 10.1111/Evo.13825  0.555
2018 Fragata I, Blanckaert A, Dias Louro MA, Liberles DA, Bank C. Evolution in the light of fitness landscape theory. Trends in Ecology & Evolution. PMID 30583805 DOI: 10.1016/J.Tree.2018.10.009  0.39
2018 Blanckaert A, Bank C. In search of the Goldilocks zone for hybrid speciation. Plos Genetics. 14: e1007613. PMID 30192761 DOI: 10.1371/Journal.Pgen.1007613  0.386
2018 Fragata I, Matuszewski S, Schmitz MA, Bataillon T, Jensen JD, Bank C. The fitness landscape of the codon space across environments. Heredity. PMID 30127529 DOI: 10.1038/S41437-018-0125-7  0.808
2018 Ghenu AH, Blanckaert A, Butlin RK, Kulmuni J, Bank C. Conflict between heterozygote advantage and hybrid incompatibility in haplodiploids (and sex chromosomes). Molecular Ecology. PMID 29328538 DOI: 10.1111/Mec.14482  0.303
2017 Matuszewski S, Ormond L, Bank C, Jensen JD. Two sides of the same coin: A population genetics perspective on lethal mutagenesis and mutational meltdown. Virus Evolution. 3: vex004. PMID 29977604 DOI: 10.1093/Ve/Vex004  0.771
2017 Ormond L, Liu P, Matuszewski S, Renzette N, Bank C, Zeldovich K, Bolon DN, Kowalik TF, Finberg RW, Jensen JD, Wang JP. The Combined Effect of Oseltamivir and Favipiravir on Influenza A Virus Evolution. Genome Biology and Evolution. 9: 1913-1924. PMID 28854600 DOI: 10.1093/Gbe/Evx138  0.762
2016 Bank C, Matuszewski S, Hietpas RT, Jensen JD. On the (un)predictability of a large intragenic fitness landscape. Proceedings of the National Academy of Sciences of the United States of America. PMID 27864516 DOI: 10.1073/Pnas.1612676113  0.8
2016 Irwin KK, Laurent S, Matuszewski S, Vuilleumier S, Ormond L, Shim H, Bank C, Jensen JD. On the importance of skewed offspring distributions and background selection in virus population genetics. Heredity. PMID 27649621 DOI: 10.1038/Hdy.2016.58  0.73
2016 Bank C, Renzette N, Liu P, Matuszewski S, Shim H, Foll M, Bolon DN, Zeldovich KB, Kowalik TF, Finberg RW, Wang JP, Jensen JD. An experimental evaluation of drug-induced mutational meltdown as an antiviral treatment strategy. Evolution; International Journal of Organic Evolution. PMID 27566611 DOI: 10.1111/Evo.13041  0.778
2016 Matuszewski S, Hildebrandt ME, Ghenu AH, Jensen JD, Bank C. A Statistical Guide to the Design of Deep Mutational Scanning Experiments. Genetics. PMID 27412710 DOI: 10.1534/Genetics.116.190462  0.785
2015 Jiang L, Liu P, Bank C, Renzette N, Prachanronarong K, Yilmaz LS, Caffrey DR, Zeldovich KB, Schiffer CA, Kowalik TF, Jensen JD, Finberg RW, Wang JP, Bolon DN. A balance between inhibitor binding and substrate processing confers influenza drug resistance. Journal of Molecular Biology. PMID 26656922 DOI: 10.1016/J.Jmb.2015.11.027  0.798
2015 Bank C, Hietpas RT, Jensen JD, Bolon DN. A systematic survey of an intragenic epistatic landscape. Molecular Biology and Evolution. 32: 229-38. PMID 25371431 DOI: 10.1093/Molbev/Msu301  0.693
2014 Bank C, Ewing GB, Ferrer-Admettla A, Foll M, Jensen JD. Thinking too positive? Revisiting current methods of population genetic selection inference. Trends in Genetics : Tig. 30: 540-6. PMID 25438719 DOI: 10.1016/J.Tig.2014.09.010  0.752
2014 Foll M, Poh YP, Renzette N, Ferrer-Admetlla A, Bank C, Shim H, Malaspinas AS, Ewing G, Liu P, Wegmann D, Caffrey DR, Zeldovich KB, Bolon DN, Wang JP, Kowalik TF, et al. Influenza virus drug resistance: a time-sampled population genetics perspective. Plos Genetics. 10: e1004185. PMID 24586206 DOI: 10.1371/Journal.Pgen.1004185  0.763
2014 Seehausen O, Butlin RK, Keller I, Wagner CE, Boughman JW, Hohenlohe PA, Peichel CL, Saetre GP, Bank C, Brännström A, Brelsford A, Clarkson CS, Eroukhmanoff F, Feder JL, Fischer MC, et al. Genomics and the origin of species. Nature Reviews. Genetics. 15: 176-92. PMID 24535286 DOI: 10.1038/Nrg3644  0.301
2014 Bank C, Hietpas RT, Wong A, Bolon DN, Jensen JD. A Bayesian MCMC approach to assess the complete distribution of fitness effects of new mutations: Uncovering the potential for adaptive walks in challenging environments Genetics. 196: 841-852. PMID 24398421 DOI: 10.1534/Genetics.113.156190  0.702
2013 Hietpas RT, Bank C, Jensen JD, Bolon DNA. Shifting fitness landscapes in response to altered environments Evolution. 67: 3512-3522. PMID 24299404 DOI: 10.1111/Evo.12207  0.688
2012 Bank C, Bürger R, Hermisson J. The limits to parapatric speciation: Dobzhansky-Muller incompatibilities in a continent-island model. Genetics. 191: 845-63. PMID 22542972 DOI: 10.1534/Genetics.111.137513  0.365
2012 Bank C, Hermisson J, Kirkpatrick M. Can reinforcement complete speciation? Evolution; International Journal of Organic Evolution. 66: 229-39. PMID 22220877 DOI: 10.1111/J.1558-5646.2011.01423.X  0.465
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