Ariel Lindner - Publications

Affiliations: 
Lyon, INSA 
Area:
RNA scaffolds, Biosciences, Cellular metabolism, Protein aggregation, Escherichia coli, Diffusion, Prionoid, Growth

56 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Bapteste E, Huneman P, Keller L, Teulière J, Lopez P, Teeling EC, Lindner AB, Baudisch A, Ludington WB, Franceschi C. Expanding evolutionary theories of ageing to better account for symbioses and interactions throughout the Web of Life. Ageing Research Reviews. 89: 101982. PMID 37321383 DOI: 10.1016/j.arr.2023.101982  0.602
2023 Yang Y, Karin O, Mayo A, Song X, Chen P, Santos AL, Lindner AB, Alon U. Damage dynamics and the role of chance in the timing of E. coli cell death. Nature Communications. 14: 2209. PMID 37072447 DOI: 10.1038/s41467-023-37930-x  0.619
2022 Guo H, Ryan JC, Song X, Mallet A, Zhang M, Pabst V, Decrulle AL, Ejsmont P, Wintermute EH, Lindner AB. Spatial engineering of E. coli with addressable phase-separated RNAs. Cell. 185: 3823-3837.e23. PMID 36179672 DOI: 10.1016/j.cell.2022.09.016  0.651
2022 Bongaerts N, Edoo Z, Abukar AA, Song X, Sosa-Carrillo S, Haggenmueller S, Savigny J, Gontier S, Lindner AB, Wintermute EH. Low-cost anti-mycobacterial drug discovery using engineered E. coli. Nature Communications. 13: 3905. PMID 35798732 DOI: 10.1038/s41467-022-31570-3  0.606
2022 Moore KJM, Cahill J, Aidelberg G, Aronoff R, Bektaş A, Bezdan D, Butler DJ, Chittur SV, Codyre M, Federici F, Tanner NA, Tighe SW, True R, Ware SB, Wyllie AL, ... Lindner AB, et al. Loop-Mediated Isothermal Amplification Detection of SARS-CoV-2 and Myriad Other Applications. Journal of Biomolecular Techniques : Jbt. 32: 228-275. PMID 35136384 DOI: 10.7171/jbt.21-3203-017  0.59
2022 Aidelberg G, Aronoff R, Eliseeva T, Quero FJ, Vielfaure H, Codyre M, Hadasch K, Lindner AB. Corona Detective: a simple, scalable, and robust SARS-CoV-2 detection method based on reverse transcription loop-mediated isothermal amplification. Journal of Biomolecular Techniques : Jbt. 32: 89-97. PMID 35027866 DOI: 10.7171/jbt.21-3203-003  0.601
2021 Dimitriu T, Misevic D, Lindner AB, Taddei F, Brown SP. Bacteria can be selected to help beneficial plasmids spread. Plos Biology. 19: e3001489. PMID 34933321 DOI: 10.1371/journal.pbio.3001489  0.598
2021 Klein A, Clucas J, Krishnakumar A, Ghosh SS, Van Auken W, Thonet B, Sabram I, Acuna N, Keshavan A, Rossiter H, Xiao Y, Semenuta S, Badioli A, Konishcheva K, Abraham SA, ... Lindner AB, et al. Remote Digital Psychiatry for Mobile Mental Health Assessment and Therapy: MindLogger Platform Development Study. Journal of Medical Internet Research. 23: e22369. PMID 34762054 DOI: 10.2196/22369  0.565
2021 Decrulle AL, Frénoy A, Meiller-Legrand TA, Bernheim A, Lotton C, Gutierrez A, Lindner AB. Engineering gene overlaps to sustain genetic constructs in vivo. Plos Computational Biology. 17: e1009475. PMID 34624014 DOI: 10.1371/journal.pcbi.1009475  0.599
2021 Haklay M, Fraisl D, Greshake Tzovaras B, Hecker S, Gold M, Hager G, Ceccaroni L, Kieslinger B, Wehn U, Woods S, Nold C, Balázs B, Mazzonetto M, Ruefenacht S, Shanley LA, ... Lindner A, et al. Contours of citizen science: a vignette study. Royal Society Open Science. 8: 202108. PMID 34457323 DOI: 10.1098/rsos.202108  0.575
2021 Greshake Tzovaras B, Rera M, Wintermute EH, Kloppenborg K, Ferry-Danini J, Aidelberg G, Aronoff R, Lindner A, Misevic D. Empowering grassroots innovation to accelerate biomedical research. Plos Biology. 19: e3001349. PMID 34370720 DOI: 10.1371/journal.pbio.3001349  0.576
2021 Bektaş A, Covington MF, Aidelberg G, Arce A, Matute T, Núñez I, Walsh J, Boutboul D, Delaugerre C, Lindner AB, Federici F, Jayaprakash AD. Accessible LAMP-Enabled Rapid Test (ALERT) for Detecting SARS-CoV-2. Viruses. 13. PMID 33922716 DOI: 10.3390/v13050742  0.612
2021 Wintermute EH, Cisel M, Lindner AB. A survival model for course-course interactions in a Massive Open Online Course platform. Plos One. 16: e0245718. PMID 33481871 DOI: 10.1371/journal.pone.0245718  0.579
2020 Marinkovic ZS, Vulin C, Acman M, Song X, Di Meglio JM, Lindner AB, Hersen P. Observing Nutrient Gradients, Gene Expression and Growth Variation Using the "Yeast Machine" Microfluidic Device. Bio-Protocol. 10: e3668. PMID 33659338 DOI: 10.21769/BioProtoc.3668  0.635
2020 Liang B, Quan B, Li J, Loton C, Bredeche MF, Lindner AB, Xu L. Artificial modulation of cell width significantly affects the division time of Escherichia coli. Scientific Reports. 10: 17847. PMID 33082450 DOI: 10.1038/s41598-020-74778-3  0.617
2020 Bafeta A, Bobe J, Clucas J, Gonsalves PP, Gruson-Daniel C, Hudson KL, Klein A, Krishnakumar A, McCollister-Slipp A, Lindner AB, Misevic D, Naslund JA, Nebeker C, Nikolaidis A, Pasquetto I, et al. Ten simple rules for open human health research. Plos Computational Biology. 16: e1007846. PMID 32881878 DOI: 10.1371/Journal.Pcbi.1007846  0.564
2020 Banderas A, Carcano A, Sia E, Li S, Lindner AB. Ratiometric quorum sensing governs the trade-off between bacterial vertical and horizontal antibiotic resistance propagation. Plos Biology. 18: e3000814. PMID 32797039 DOI: 10.1371/journal.pbio.3000814  0.636
2019 Mordret E, Dahan O, Asraf O, Rak R, Yehonadav A, Barnabas GD, Cox J, Geiger T, Lindner AB, Pilpel Y. Systematic Detection of Amino Acid Substitutions in Proteomes Reveals Mechanistic Basis of Ribosome Errors and Selection for Translation Fidelity. Molecular Cell. PMID 31353208 DOI: 10.1016/J.Molcel.2019.06.041  0.596
2019 Marinkovic Z, Vulin C, Acman M, Song X, Di Meglio JM, Lindner AB, Hersen P. A microfluidic device for inferring metabolic landscapes in yeast monolayer colonies. Elife. 8. PMID 31259688 DOI: 10.7554/Elife.47951  0.62
2019 Yang Y, Santos AL, Xu L, Lotton C, Taddei F, Lindner AB. Temporal scaling of aging as an adaptive strategy of . Science Advances. 5: eaaw2069. PMID 31149637 DOI: 10.1126/Sciadv.Aaw2069  0.623
2019 Steiner UK, Lenart A, Ni M, Chen P, Song X, Taddei F, Lindner AB, Vaupel JW. Two stochastic processes shape diverse senescence patterns in a single-cell organism. Evolution; International Journal of Organic Evolution. PMID 30816556 DOI: 10.1111/Evo.13708  0.622
2018 Santos AL, Sinha S, Lindner AB. The Good, the Bad, and the Ugly of ROS: New Insights on Aging and Aging-Related Diseases from Eukaryotic and Prokaryotic Model Organisms. Oxidative Medicine and Cellular Longevity. 2018: 1941285. PMID 29743972 DOI: 10.1155/2018/1941285  0.614
2017 Santos AL, Lindner AB. Protein Posttranslational Modifications: Roles in Aging and Age-Related Disease. Oxidative Medicine and Cellular Longevity. 2017: 5716409. PMID 28894508 DOI: 10.1155/2017/5716409  0.614
2016 Dimitriu T, Misevic D, Lotton C, Brown SP, Lindner AB, Taddei F. Indirect Fitness Benefits Enable the Spread of Host Genes Promoting Costly Transfer of Beneficial Plasmids. Plos Biology. 14: e1002478. PMID 27270455 DOI: 10.1371/Journal.Pbio.1002478  0.617
2016 Bernheim AG, Libis VK, Lindner AB, Wintermute EH. Phage-mediated Delivery of Targeted sRNA Constructs to Knock Down Gene Expression in E. coli. Journal of Visualized Experiments : Jove. PMID 27023729 DOI: 10.3791/53618  0.641
2016 Benony M, Cardon M, Ferré A, Coquet J, Foulquier N, Thonier F, Le Lann L, De Belly H, Evans A, Jain A, García Arcos JM, Bland J, Marcus I, Lindner AB, Wintermute EH. The smell of us – crowdsourcing human body odor evaluation Human Computation. 3. DOI: 10.15346/hc.v3i1.9  0.571
2015 Izard J, Gomez Balderas CD, Ropers D, Lacour S, Song X, Yang Y, Lindner AB, Geiselmann J, de Jong H. A synthetic growth switch based on controlled expression of RNA polymerase. Molecular Systems Biology. 11: 840. PMID 26596932 DOI: 10.15252/msb.20156382  0.631
2015 Dimitriu T, Misevic D, Lindner AB, Taddei F. Mobile genetic elements are involved in bacterial sociality. Mobile Genetic Elements. 5: 7-11. PMID 26435881 DOI: 10.1080/2159256X.2015.1006110  0.614
2015 Misevic D, Frénoy A, Lindner AB, Taddei F. Shape matters: lifecycle of cooperative patches promotes cooperation in bulky populations. Evolution; International Journal of Organic Evolution. 69: 788-802. PMID 25639379 DOI: 10.1111/Evo.12616  0.607
2014 Libis VK, Bernheim AG, Basier C, Jaramillo-Riveri S, Deyell M, Aghoghogbe I, Atanaskovic I, Bencherif AC, Benony M, Koutsoubelis N, Löchner AC, Marinkovic ZS, Zahra S, Zegman Y, Lindner AB, et al. Silencing of antibiotic resistance in E. coli with engineered phage bearing small regulatory RNAs. Acs Synthetic Biology. 3: 1003-6. PMID 25524110 DOI: 10.1021/sb500033d  0.622
2014 Atanaskovic I, Bencherif AC, Deyell M, Jaramillo-Riveri S, Benony M, Bernheim AG, Libis VK, Koutsoubelis N, Zegman Y, Löchner AC, Basier C, Aghoghogbe I, Marinkovic ZS, Zahra S, Toulouze M, Lindner AB, et al. In situ characterization of mycobacterial growth inhibition by lytic enzymes expressed in vectorized E. coli. Acs Synthetic Biology. 3: 932-4. PMID 25408994 DOI: 10.1021/sb500039z  0.614
2014 Dimitriu T, Lotton C, Bénard-Capelle J, Misevic D, Brown SP, Lindner AB, Taddei F. Genetic information transfer promotes cooperation in bacteria. Proceedings of the National Academy of Sciences of the United States of America. 111: 11103-8. PMID 25024219 DOI: 10.1073/Pnas.1406840111  0.625
2014 Vulin C, Di Meglio JM, Lindner AB, Daerr A, Murray A, Hersen P. Growing yeast into cylindrical colonies. Biophysical Journal. 106: 2214-21. PMID 24853750 DOI: 10.1016/J.Bpj.2014.02.040  0.627
2014 Chen P, Xu L, Liu J, Hol FJ, Keymer JE, Taddei F, Han D, Lindner AB. Nanoscale probing the kinetics of oriented bacterial cell growth using atomic force microscopy. Small (Weinheim An Der Bergstrasse, Germany). 10: 3018-25. PMID 24706390 DOI: 10.1002/Smll.201303724  0.618
2014 Gasset-Rosa F, Coquel AS, Moreno-Del Álamo M, Chen P, Song X, Serrano AM, Fernández-Tresguerres ME, Moreno-Díaz de la Espina S, Lindner AB, Giraldo R. Direct assessment in bacteria of prionoid propagation and phenotype selection by Hsp70 chaperone. Molecular Microbiology. 91: 1070-87. PMID 24417419 DOI: 10.1111/Mmi.12518  0.747
2014 Himmelstein J, Couzic M, Jennett C, Cox AL, Goujet R, Lindner A, Taddei F. RedWire: A novel way to create and re-mix games Chi Play 2014 - Proceedings of the 2014 Annual Symposium On Computer-Human Interaction in Play. 423-424. DOI: 10.1145/2658537.2661315  0.566
2013 Coquel AS, Jacob JP, Primet M, Demarez A, Dimiccoli M, Julou T, Moisan L, Lindner AB, Berry H. Localization of protein aggregation in Escherichia coli is governed by diffusion and nucleoid macromolecular crowding effect. Plos Computational Biology. 9: e1003038. PMID 23633942 DOI: 10.1371/Journal.Pcbi.1003038  0.739
2012 Ni M, Decrulle AL, Fontaine F, Demarez A, Taddei F, Lindner AB. Pre-disposition and epigenetics govern variation in bacterial survival upon stress. Plos Genetics. 8: e1003148. PMID 23284305 DOI: 10.1371/Journal.Pgen.1003148  0.608
2012 Delebecque CJ, Silver PA, Lindner AB. Designing and using RNA scaffolds to assemble proteins in vivo. Nature Protocols. 7: 1797-807. PMID 22955695 DOI: 10.1038/Nprot.2012.102  0.746
2011 Delebecque CJ, Lindner AB, Silver PA, Aldaye FA. Organization of intracellular reactions with rationally designed RNA assemblies. Science (New York, N.Y.). 333: 470-4. PMID 21700839 DOI: 10.1126/Science.1206938  0.747
2011 Tesfazgi Mebrhatu M, Wywial E, Ghosh A, Michiels CW, Lindner AB, Taddei F, Bujnicki JM, Van Melderen L, Aertsen A. Evidence for an evolutionary antagonism between Mrr and Type III modification systems. Nucleic Acids Research. 39: 5991-6001. PMID 21504983 DOI: 10.1093/Nar/Gkr219  0.613
2010 De Paepe M, De Monte S, Robert L, Lindner AB, Taddei F. Emergence of variability in isogenic Escherichia coli populations infected by a filamentous virus. Plos One. 5: e11823. PMID 20676396 DOI: 10.1371/Journal.Pone.0011823  0.619
2010 Robert L, Paul G, Chen Y, Taddei F, Baigl D, Lindner AB. Pre-dispositions and epigenetic inheritance in the Escherichia coli lactose operon bistable switch. Molecular Systems Biology. 6: 357. PMID 20393577 DOI: 10.1038/Msb.2010.12  0.633
2009 Lindner AB, Demarez A. Protein aggregation as a paradigm of aging. Biochimica Et Biophysica Acta. 1790: 980-96. PMID 19527771 DOI: 10.1016/j.bbagen.2009.06.005  0.613
2009 Slade D, Lindner AB, Paul G, Radman M. Recombination and replication in DNA repair of heavily irradiated Deinococcus radiodurans. Cell. 136: 1044-55. PMID 19303848 DOI: 10.1016/J.Cell.2009.01.018  0.587
2008 Babic A, Lindner AB, Vulic M, Stewart EJ, Radman M. Direct visualization of horizontal gene transfer. Science (New York, N.Y.). 319: 1533-6. PMID 18339941 DOI: 10.1126/Science.1153498  0.624
2008 Lindner AB, Madden R, Demarez A, Stewart EJ, Taddei F. Asymmetric segregation of protein aggregates is associated with cellular aging and rejuvenation. Proceedings of the National Academy of Sciences of the United States of America. 105: 3076-81. PMID 18287048 DOI: 10.1073/Pnas.0708931105  0.652
2008 Giraud A, Arous S, De Paepe M, Gaboriau-Routhiau V, Bambou JC, Rakotobe S, Lindner AB, Taddei F, Cerf-Bensussan N. Dissecting the genetic components of adaptation of Escherichia coli to the mouse gut. Plos Genetics. 4: e2. PMID 18193944 DOI: 10.1371/Journal.Pgen.0040002  0.605
2008 Fontaine F, Stewart EJ, Lindner AB, Taddei F. Mutations in two global regulators lower individual mortality in Escherichia coli. Molecular Microbiology. 67: 2-14. PMID 18036141 DOI: 10.1111/J.1365-2958.2007.05988.X  0.611
2008 Primet M, Demarez A, Taddei F, Lindner AB, Moisan L. Tracking of cells in a sequence of images using a low-dimension image representation 2008 5th Ieee International Symposium On Biomedical Imaging: From Nano to Macro, Proceedings, Isbi. 995-998. DOI: 10.1109/ISBI.2008.4541166  0.581
2007 Xu L, Robert L, Ouyang Q, Taddei F, Chen Y, Lindner AB, Baigl D. Microcontact printing of living bacteria arrays with cellular resolution. Nano Letters. 7: 2068-72. PMID 17585831 DOI: 10.1021/Nl070983Z  0.624
2006 Andersen JB, Roldgaard BB, Lindner AB, Christensen BB, Licht TR. Construction of a multiple fluorescence labelling system for use in co-invasion studies of Listeria monocytogenes. Bmc Microbiology. 6: 86. PMID 17014739 DOI: 10.1186/1471-2180-6-86  0.577
2006 Zahradka K, Slade D, Bailone A, Sommer S, Averbeck D, Petranovic M, Lindner AB, Radman M. Reassembly of shattered chromosomes in Deinococcus radiodurans. Nature. 443: 569-73. PMID 17006450 DOI: 10.1038/Nature05160  0.597
2004 Lindner A, Hollfelder F. European Symposium of Bio-Organic Chemistry 2003 (ESBOC): the evolution of catalysis. Chembiochem : a European Journal of Chemical Biology. 5: 241-3. PMID 14760746 DOI: 10.1002/Cbic.200300796  0.587
2003 Levit-Binnun N, Lindner AB, Zik O, Eshhar Z, Moses E. Quantitative detection of protein arrays. Analytical Chemistry. 75: 1436-41. PMID 12659207 DOI: 10.1021/Ac0261350  0.605
2002 Lindner AB, Kim SH, Schindler DG, Eshhar Z, Tawfik DS. Esterolytic antibodies as mechanistic and structural models of hydrolases-a quantitative analysis. Journal of Molecular Biology. 320: 559-72. PMID 12096909 DOI: 10.1016/S0022-2836(02)00418-7  0.58
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