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Jochen C. Rink - Publications

Affiliations: 
None Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Sachsen, Germany 
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31 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Vila-Farré M, Rozanski A, Ivanković M, Cleland J, Brand JN, Thalen F, Grohme MA, von Kannen S, Grosbusch AL, Vu HT, Prieto CE, Carbayo F, Egger B, Bleidorn C, Rasko JEJ, ... Rink JC, et al. Evolutionary dynamics of whole-body regeneration across planarian flatworms. Nature Ecology & Evolution. PMID 37857891 DOI: 10.1038/s41559-023-02221-7  0.713
2023 Vila-Farré M, Vu HT, Rink JC. Whole-Mount In Situ Hybridization in Large Sexual Schmidtea mediterranea. Methods in Molecular Biology (Clifton, N.J.). 2680: 107-119. PMID 37428374 DOI: 10.1007/978-1-0716-3275-8_7  0.567
2022 Hall RN, Weill U, Drees L, Leal-Ortiz S, Li H, Khariton M, Chai C, Xue Y, Rosental B, Quake SR, Sánchez Alvarado A, Melosh NA, Fire AZ, Rink JC, Wang B. Heterologous reporter expression in the planarian through somatic mRNA transfection. Cell Reports Methods. 2: 100298. PMID 36313809 DOI: 10.1016/j.crmeth.2022.100298  0.568
2019 Vu HT, Mansour S, Kücken M, Blasse C, Basquin C, Azimzadeh J, Myers EW, Brusch L, Rink JC. Dynamic Polarization of the Multiciliated Planarian Epidermis between Body Plan Landmarks. Developmental Cell. 51: 526-542.e6. PMID 31743666 DOI: 10.1016/J.Devcel.2019.10.022  0.596
2019 Basquin C, Ershov D, Gaudin N, Vu HT, Louis B, Papon JF, Orfila AM, Mansour S, Rink JC, Azimzadeh J. Emergence of a Bilaterally Symmetric Pattern from Chiral Components in the Planarian Epidermis. Developmental Cell. 51: 516-525.e5. PMID 31743665 DOI: 10.1016/J.Devcel.2019.10.021  0.613
2019 Ivankovic M, Haneckova R, Thommen A, Grohme MA, Vila-Farré M, Werner S, Rink JC. Model systems for regeneration: planarians. Development (Cambridge, England). 146. PMID 31511248 DOI: 10.1242/Dev.167684  0.348
2018 Rozanski A, Moon H, Brandl H, Martín-Durán JM, Grohme MA, Hüttner K, Bartscherer K, Henry I, Rink JC. PlanMine 3.0-improvements to a mineable resource of flatworm biology and biodiversity. Nucleic Acids Research. PMID 30496475 DOI: 10.1093/Nar/Gky1070  0.331
2018 Weigert M, Schmidt U, Boothe T, Müller A, Dibrov A, Jain A, Wilhelm B, Schmidt D, Broaddus C, Culley S, Rocha-Martins M, Segovia-Miranda F, Norden C, Henriques R, Zerial M, ... ... Rink J, et al. Content-aware image restoration: pushing the limits of fluorescence microscopy. Nature Methods. PMID 30478326 DOI: 10.1038/S41592-018-0216-7  0.515
2018 Rink JC. Stem Cells, Patterning and Regeneration in Planarians: Self-Organization at the Organismal Scale. Methods in Molecular Biology (Clifton, N.J.). 1774: 57-172. PMID 29916155 DOI: 10.1007/978-1-4939-7802-1_2  0.391
2018 Grohme MA, Schloissnig S, Rozanski A, Pippel M, Young GR, Winkler S, Brandl H, Henry I, Dahl A, Powell S, Hiller M, Myers E, Rink JC. The genome of Schmidtea mediterranea and the evolution of core cellular mechanisms. Nature. PMID 29364871 DOI: 10.1038/Nature25473  0.316
2017 Hoffmann KB, Voss-Böhme A, Rink JC, Brusch L. A dynamically diluted alignment model reveals the impact of cell turnover on the plasticity of tissue polarity patterns. Journal of the Royal Society, Interface. 14. PMID 28978744 DOI: 10.1098/Rsif.2017.0466  0.346
2017 Stückemann T, Cleland JP, Werner S, Thi-Kim Vu H, Bayersdorf R, Liu SY, Friedrich B, Jülicher F, Rink JC. Antagonistic Self-Organizing Patterning Systems Control Maintenance and Regeneration of the Anteroposterior Axis in Planarians. Developmental Cell. 40: 248-263.e4. PMID 28171748 DOI: 10.1016/J.Devcel.2016.12.024  0.73
2017 Boothe T, Hilbert L, Heide M, Berninger L, Huttner WB, Zaburdaev V, Vastenhouw NL, Myers EW, Drechsel DN, Rink JC. Author response: A tunable refractive index matching medium for live imaging cells, tissues and model organisms Elife. DOI: 10.7554/Elife.27240.022  0.315
2016 Werner S, Vu HT, Rink JC. Self-organization in development, regeneration and organoids. Current Opinion in Cell Biology. PMID 27720307 DOI: 10.1016/J.Ceb.2016.09.002  0.628
2016 Levin M, Anavy L, Cole AG, Winter E, Mostov N, Khair S, Senderovich N, Kovalev E, Silver DH, Feder M, Fernandez-Valverde SL, Nakanishi N, Simmons D, Simakov O, Larsson T, ... ... Rink JC, et al. The mid-developmental transition and the evolution of animal body plans. Nature. PMID 26886793 DOI: 10.1038/Nature16994  0.352
2015 Brandl H, Moon H, Vila-Farré M, Liu SY, Henry I, Rink JC. PlanMine - a mineable resource of planarian biology and biodiversity. Nucleic Acids Research. PMID 26578570 DOI: 10.1093/Nar/Gkv1148  0.355
2015 Thi-Kim Vu H, Rink JC, McKinney SA, McClain M, Lakshmanaperumal N, Alexander R, Sánchez Alvarado A. Stem cells and fluid flow drive cyst formation in an invertebrate excretory organ. Elife. 4. PMID 26057828 DOI: 10.7554/Elife.07405  0.614
2015 Werner S, Stückemann T, Beirán Amigo M, Rink JC, Jülicher F, Friedrich BM. Scaling and regeneration of self-organized patterns. Physical Review Letters. 114: 138101. PMID 25884138 DOI: 10.1103/Physrevlett.114.138101  0.356
2014 Collinet C, Stöter M, Bradshaw CR, Samusik N, Rink JC, Kenski D, Habermann B, Buchholz F, Henschel R, Mueller MS, Nagel WE, Fava E, Kalaidzidis Y, Zerial M. Corrigendum: Systems survey of endocytosis by multiparametric image analysis (Nature (2010) 464, (243-249) DOI: 10.1038/nature08779) Nature. 513: 444. DOI: 10.1038/Nature13676  0.505
2013 Liu SY, Selck C, Friedrich B, Lutz R, Vila-Farré M, Dahl A, Brandl H, Lakshmanaperumal N, Henry I, Rink JC. Reactivating head regrowth in a regeneration-deficient planarian species. Nature. 500: 81-4. PMID 23883932 DOI: 10.1038/Nature12414  0.399
2013 Rink JC. Stem cell systems and regeneration in planaria Development Genes and Evolution. 223: 67-84. PMID 23138344 DOI: 10.1007/S00427-012-0426-4  0.354
2012 Vij S, Rink JC, Ho HK, Babu D, Eitel M, Narasimhan V, Tiku V, Westbrook J, Schierwater B, Roy S. Evolutionarily ancient association of the FoxJ1 transcription factor with the motile ciliogenic program. Plos Genetics. 8: e1003019. PMID 23144623 DOI: 10.1371/Journal.Pgen.1003019  0.35
2011 Tang D, Xiang Y, De Renzis S, Rink J, Zheng G, Zerial M, Wang Y. The ubiquitin ligase HACE1 regulates Golgi membrane dynamics during the cell cycle. Nature Communications. 2: 501. PMID 21988917 DOI: 10.1038/Ncomms1509  0.527
2011 Rink JC, Vu HT, Sánchez Alvarado A. The maintenance and regeneration of the planarian excretory system are regulated by EGFR signaling. Development (Cambridge, England). 138: 3769-80. PMID 21828097 DOI: 10.1242/Dev.066852  0.726
2010 Collinet C, Stöter M, Bradshaw CR, Samusik N, Rink JC, Kenski D, Habermann B, Buchholz F, Henschel R, Mueller MS, Nagel WE, Fava E, Kalaidzidis Y, Zerial M. Systems survey of endocytosis by multiparametric image analysis. Nature. 464: 243-9. PMID 20190736 DOI: 10.1038/Nature08779  0.593
2010 Collinet C, Stöter M, Bradshaw C, Samusik N, Rink JC, Habermann B, Fava E, Kalaidzidis Y, Zerial M. System analysis of endocytosis by functional genomics and quantitative multi-parametric image analysis New Biotechnology. 27: S2. DOI: 10.1016/J.Nbt.2010.01.289  0.508
2009 Rink JC, Gurley KA, Elliott SA, Sánchez Alvarado A. Planarian Hh signaling regulates regeneration polarity and links Hh pathway evolution to cilia. Science (New York, N.Y.). 326: 1406-10. PMID 19933103 DOI: 10.1126/Science.1178712  0.63
2009 Pearson BJ, Eisenhoffer GT, Gurley KA, Rink JC, Miller DE, Sánchez Alvarado A. Formaldehyde-based whole-mount in situ hybridization method for planarians. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 238: 443-50. PMID 19161223 DOI: 10.1002/Dvdy.21849  0.609
2008 Del Conte-Zerial P, Brusch L, Rink JC, Collinet C, Kalaidzidis Y, Zerial M, Deutsch A. Membrane identity and GTPase cascades regulated by toggle and cut-out switches. Molecular Systems Biology. 4: 206. PMID 18628746 DOI: 10.1038/Msb.2008.45  0.55
2008 Gurley KA, Rink JC, Sánchez Alvarado A. Beta-catenin defines head versus tail identity during planarian regeneration and homeostasis. Science (New York, N.Y.). 319: 323-7. PMID 18063757 DOI: 10.1126/Science.1150029  0.591
2005 Rink J, Ghigo E, Kalaidzidis Y, Zerial M. Rab conversion as a mechanism of progression from early to late endosomes. Cell. 122: 735-49. PMID 16143105 DOI: 10.1016/J.Cell.2005.06.043  0.548
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