David F. Clayton - Publications

University of Illinois, Urbana, IL, United States 
Birdsong, Neurogenomics

122 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Rhie A, McCarthy SA, Fedrigo O, Damas J, Formenti G, Koren S, Uliano-Silva M, Chow W, Fungtammasan A, Kim J, Lee C, Ko BJ, Chaisson M, Gedman GL, Cantin LJ, ... ... Clayton DF, et al. Towards complete and error-free genome assemblies of all vertebrate species. Nature. 592: 737-746. PMID 33911273 DOI: 10.1038/s41586-021-03451-0  1
2020 Yip PK, Schmitzberger M, Al-Hasan M, George J, Tripoliti E, Michael-Titus AT, Clayton D, Priestley JV. Serotonin expression in the song circuitry of adult male zebra finches. Neuroscience. PMID 32590039 DOI: 10.1016/J.Neuroscience.2020.06.018  0.84
2019 George JM, Bell ZW, Condliffe D, Dohrer K, Abaurrea T, Spencer K, Leitão A, Gahr M, Hurd PJ, Clayton DF. Acute social isolation alters neurogenomic state in songbird forebrain. Proceedings of the National Academy of Sciences of the United States of America. PMID 31332005 DOI: 10.1073/Pnas.1820841116  0.92
2019 Lansverk AL, Schroeder KM, London SE, Griffith SC, Clayton DF, Balakrishnan CN. The variability of song variability in zebra finch () populations. Royal Society Open Science. 6: 190273. PMID 31218064 DOI: 10.1098/Rsos.190273  1
2019 Bell ZW, Lovell P, Mello CV, Yip PK, George JM, Clayton DF. Urotensin-related gene transcripts mark developmental emergence of the male forebrain vocal control system in songbirds. Scientific Reports. 9: 816. PMID 30692609 DOI: 10.1038/S41598-018-37057-W  1
2016 Stowell D, Gill L, Clayton D. Detailed temporal structure of communication networks in groups of songbirds. Journal of the Royal Society, Interface / the Royal Society. 13. PMID 27335223 DOI: 10.1098/rsif.2016.0296  0.96
2015 Clayton D, Hanchapola I, Thomas WG, Widdop RE, Smith AI, Perlmutter P, Aguilar MI. Structural determinants for binding to angiotensin converting enzyme 2 (ACE2) and angiotensin receptors 1 and 2. Frontiers in Pharmacology. 6: 5. PMID 25688208 DOI: 10.3389/fphar.2015.00005  0.32
2015 Mello CV, Clayton DF. The opportunities and challenges of large-scale molecular approaches to songbird neurobiology. Neuroscience and Biobehavioral Reviews. 50: 70-6. PMID 25280907 DOI: 10.1016/j.neubiorev.2014.09.017  0.96
2014 Lin YC, Balakrishnan CN, Clayton DF. Functional genomic analysis and neuroanatomical localization of miR-2954, a song-responsive sex-linked microRNA in the zebra finch. Frontiers in Neuroscience. 8: 409. PMID 25565940 DOI: 10.3389/Fnins.2014.00409  1
2014 McDonald CA, Payne NL, Sun G, Clayton DJ, Del Borgo MP, Aguilar MI, Perlmutter P, Bernard CC. Single β³-amino acid substitutions to MOG peptides suppress the development of experimental autoimmune encephalomyelitis. Journal of Neuroimmunology. 277: 67-76. PMID 25454728 DOI: 10.1016/j.jneuroim.2014.09.022  0.32
2014 Millard CJ, Ludeman JP, Canals M, Bridgford JL, Hinds MG, Clayton DJ, Christopoulos A, Payne RJ, Stone MJ. Structural basis of receptor sulfotyrosine recognition by a CC chemokine: the N-terminal region of CCR3 bound to CCL11/eotaxin-1. Structure (London, England : 1993). 22: 1571-81. PMID 25450766 DOI: 10.1016/J.Str.2014.08.023  0.32
2014 Shan Z, Clayton D, Pan S, Archana PS, Gupta A. Visible light driven photoelectrochemical properties of Ti@TiO2 nanowire electrodes sensitized with core-shell Ag@Ag2S nanoparticles. The Journal of Physical Chemistry. B. 118: 14037-46. PMID 25009953 DOI: 10.1021/Jp504346K  0.72
2014 Balakrishnan CN, Mukai M, Gonser RA, Wingfield JC, London SE, Tuttle EM, Clayton DF. Brain transcriptome sequencing and assembly of three songbird model systems for the study of social behavior. Peerj. 2: e396. PMID 24883256 DOI: 10.7717/Peerj.396  1
2014 Schroeder CI, Swedberg JE, Withka JM, Rosengren KJ, Akcan M, Clayton DJ, Daly NL, Cheneval O, Borzilleri KA, Griffor M, Stock I, Colless B, Walsh P, Sunderland P, Reyes A, et al. Design and synthesis of truncated EGF-A peptides that restore LDL-R recycling in the presence of PCSK9 in vitro. Chemistry & Biology. 21: 284-94. PMID 24440079 DOI: 10.1016/J.Chembiol.2013.11.014  0.32
2014 Clayton DF, London SE. Advancing avian behavioral neuroendocrinology through genomics. Frontiers in Neuroendocrinology. 35: 58-71. PMID 24113222 DOI: 10.1016/j.yfrne.2013.09.004  1
2013 Hill CM, Clayton DA, Pan S. Combined optical and electrochemical methods for studying electrochemistry at the single molecule and single particle level: recent progress and perspectives. Physical Chemistry Chemical Physics : Pccp. 15: 20797-807. PMID 24196825 DOI: 10.1039/C3Cp52756E  0.72
2013 Balakrishnan CN, Chapus C, Brewer MS, Clayton DF. Brain transcriptome of the violet-eared waxbill Uraeginthus granatina and recent evolution in the songbird genome. Open Biology. 3: 130063. PMID 24004662 DOI: 10.1098/Rsob.130063  1
2013 Clayton DF. The genomics of memory and learning in songbirds. Annual Review of Genomics and Human Genetics. 14: 45-65. PMID 23875795 DOI: 10.1146/annurev-genom-090711-163809  1
2013 Lee JV, Maclin EL, Low KA, Gratton G, Fabiani M, Clayton DF. Noninvasive diffusive optical imaging of the auditory response to birdsong in the zebra finch. Journal of Comparative Physiology. a, Neuroethology, Sensory, Neural, and Behavioral Physiology. 199: 227-38. PMID 23322445 DOI: 10.1007/s00359-012-0788-0  1
2013 Clayton DA, McPherson TE, Pan S, Chen M, Dixon DA, Hu D. Spatial and temporal variation of surface-enhanced Raman scattering at Ag nanowires in aqueous solution. Physical Chemistry Chemical Physics : Pccp. 15: 850-9. PMID 23202361 DOI: 10.1039/C2Cp43424E  0.72
2013 Kültz D, Clayton DF, Robinson GE, Albertson C, Carey HV, Cummings ME, Dewar K, Edwards SV, Hofmann HA, Gross LJ, Kingsolver JG, Meaney MJ, Schlinger BA, Shingleton AW, Sokolowski MB, et al. New frontiers for organismal biology Bioscience. 63: 464-471. DOI: 10.1525/Bio.2013.63.6.8  1
2013 Xu C, Geng H, Bennett R, Clayton DA, Pan S. Ti@TiO2 nanowire electrode with polydisperse gold nanoparticles for electrogenerated chemiluminescence and surface enhanced Raman spectroelectrochemistry Journal of Physical Chemistry C. 117: 1849-1856. DOI: 10.1021/Jp3108304  0.72
2012 Stevenson TJ, Replogle K, Drnevich J, Clayton DF, Ball GF. High throughput analysis reveals dissociable gene expression profiles in two independent neural systems involved in the regulation of social behavior. Bmc Neuroscience. 13: 126. PMID 23078552 DOI: 10.1186/1471-2202-13-126  1
2012 Drnevich J, Replogle KL, Lovell P, Hahn TP, Johnson F, Mast TG, Nordeen E, Nordeen K, Strand C, London SE, Mukai M, Wingfield JC, Arnold AP, Ball GF, Brenowitz EA, ... ... Clayton DF, et al. Impact of experience-dependent and -independent factors on gene expression in songbird brain. Proceedings of the National Academy of Sciences of the United States of America. 109: 17245-52. PMID 23045667 DOI: 10.1073/Pnas.1200655109  1
2012 Feder D, Hussein WM, Clayton DJ, Kan MW, Schenk G, McGeary RP, Guddat LW. Identification of purple acid phosphatase inhibitors by fragment-based screening: promising new leads for osteoporosis therapeutics. Chemical Biology & Drug Design. 80: 665-74. PMID 22943065 DOI: 10.1111/cbdd.12001  0.32
2012 Balakrishnan CN, Lin YC, London SE, Clayton DF. RNA-seq transcriptome analysis of male and female zebra finch cell lines. Genomics. 100: 363-9. PMID 22922019 DOI: 10.1016/J.Ygeno.2012.08.002  1
2012 Mole F, Wang J, Clayton DA, Xu C, Pan S. Highly conductive nanostructured C-TiO2 electrodes with enhanced electrochemical stability and double layer charge storage capacitance. Langmuir : the Acs Journal of Surfaces and Colloids. 28: 10610-9. PMID 22757967 DOI: 10.1021/La300858D  0.72
2012 Thompson CK, Meitzen J, Replogle K, Drnevich J, Lent KL, Wissman AM, Farin FM, Bammler TK, Beyer RP, Clayton DF, Perkel DJ, Brenowitz EA. Seasonal changes in patterns of gene expression in avian song control brain regions. Plos One. 7: e35119. PMID 22529977 DOI: 10.1371/journal.pone.0035119  1
2012 Koop JA, Huber SK, Clayton DH. Does sunlight enhance the effectiveness of avian preening for ectoparasite control? The Journal of Parasitology. 98: 46-8. PMID 21942474 DOI: 10.1645/Ge-2889.1  0.4
2011 Ambaye ND, Pero SC, Gunzburg MJ, Yap M, Clayton DJ, Del Borgo MP, Perlmutter P, Aguilar MI, Shukla GS, Peletskaya E, Cookson MM, Krag DN, Wilce MC, Wilce JA. Structural basis of binding by cyclic nonphosphorylated peptide antagonists of Grb7 implicated in breast cancer progression. Journal of Molecular Biology. 412: 397-411. PMID 21802427 DOI: 10.1016/j.jmb.2011.07.030  0.32
2011 Gunaratne PH, Lin YC, Benham AL, Drnevich J, Coarfa C, Tennakoon JB, Creighton CJ, Kim JH, Milosavljevic A, Watson M, Griffiths-Jones S, Clayton DF. Song exposure regulates known and novel microRNAs in the zebra finch auditory forebrain. Bmc Genomics. 12: 277. PMID 21627805 DOI: 10.1186/1471-2164-12-277  1
2011 Koop JA, Huber SK, Laverty SM, Clayton DH. Experimental demonstration of the fitness consequences of an introduced parasite of Darwin's finches. Plos One. 6: e19706. PMID 21589659 DOI: 10.1371/Journal.Pone.0019706  0.4
2011 Vella P, Hussein WM, Leung EW, Clayton D, Ollis DL, Mitić N, Schenk G, McGeary RP. The identification of new metallo-β-lactamase inhibitor leads from fragment-based screening. Bioorganic & Medicinal Chemistry Letters. 21: 3282-5. PMID 21536436 DOI: 10.1016/J.Bmcl.2011.04.027  0.32
2011 Amaya KR, Sweedler JV, Clayton DF. Small molecule analysis and imaging of fatty acids in the zebra finch song system using time-of-flight-secondary ion mass spectrometry. Journal of Neurochemistry. 118: 499-511. PMID 21496023 DOI: 10.1111/J.1471-4159.2011.07274.X  0.92
2011 Johnson KP, Weckstein JD, Bush SE, Clayton DH. The evolution of host specificity in dove body lice. Parasitology. 138: 1730-6. PMID 21349215 DOI: 10.1017/S0031182010001770  0.4
2011 Zhu JZ, Millard CJ, Ludeman JP, Simpson LS, Clayton DJ, Payne RJ, Widlanski TS, Stone MJ. Tyrosine sulfation influences the chemokine binding selectivity of peptides derived from chemokine receptor CCR3. Biochemistry. 50: 1524-34. PMID 21235238 DOI: 10.1021/Bi101240V  0.32
2011 Janes DE, Chapus C, Gondo Y, Clayton DF, Sinha S, Blatti CA, Organ CL, Fujita MK, Balakrishnan CN, Edwards SV. Reptiles and mammals have differentially retained long conserved noncoding sequences from the amniote ancestor. Genome Biology and Evolution. 3: 102-13. PMID 21183607 DOI: 10.1093/Gbe/Evq087  1
2011 Ambaye ND, Lim RC, Clayton DJ, Gunzburg MJ, Price JT, Pero SC, Krag DN, Wilce MC, Aguilar MI, Perlmutter P, Wilce JA. Uptake of a cell permeable G7-18NATE contruct into cells and binding with the Grb-7-SH2 domain. Biopolymers. 96: 181-8. PMID 20564009 DOI: 10.1002/bip.21403  0.32
2010 Yap MY, Wilce MC, Clayton DJ, Perlmutter P, Aguilar MI, Wilce JA. Preparation and crystallization of the Grb7 SH2 domain in complex with the G7-18NATE nonphosphorylated cyclic inhibitor peptide. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 1640-3. PMID 21139214 DOI: 10.1107/S1744309110041850  0.32
2010 Owen JP, Nelson AC, Clayton DH. Ecological immunology of bird-ectoparasite systems. Trends in Parasitology. 26: 530-9. PMID 20599426 DOI: 10.1016/J.Pt.2010.06.005  0.4
2010 Nam K, Mugal C, Nabholz B, Schielzeth H, Wolf JB, Backström N, Künstner A, Balakrishnan CN, Heger A, Ponting CP, Clayton DF, Ellegren H. Molecular evolution of genes in avian genomes. Genome Biology. 11: R68. PMID 20573239 DOI: 10.1186/Gb-2010-11-6-R68  1
2010 Johnson KP, Clayton DH, Dumbacher JP, Fleischer RC. The flight of the Passenger Pigeon: phylogenetics and biogeographic history of an extinct species. Molecular Phylogenetics and Evolution. 57: 455-8. PMID 20478386 DOI: 10.1016/J.Ympev.2010.05.010  0.4
2010 Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Künstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, et al. The genome of a songbird. Nature. 464: 757-62. PMID 20360741 DOI: 10.1038/Nature08819  1
2010 Xie F, London SE, Southey BR, Annangudi SP, Amare A, Rodriguez-Zas SL, Clayton DF, Sweedler JV. The zebra finch neuropeptidome: prediction, detection and expression. Bmc Biology. 8: 28. PMID 20359331 DOI: 10.1186/1741-7007-8-28  1
2010 London SE, Clayton DF. Genomic and neural analysis of the estradiol-synthetic pathway in the zebra finch. Bmc Neuroscience. 11: 46. PMID 20359328 DOI: 10.1186/1471-2202-11-46  1
2010 Itoh Y, Replogle K, Kim YH, Wade J, Clayton DF, Arnold AP. Sex bias and dosage compensation in the zebra finch versus chicken genomes: general and specialized patterns among birds. Genome Research. 20: 512-8. PMID 20357053 DOI: 10.1101/Gr.102343.109  1
2010 Clayton DA, Benoist DM, Zhu Y, Pan S. Photoluminescence and spectroelectrochemistry of single ag nanowires. Acs Nano. 4: 2363-73. PMID 20355737 DOI: 10.1021/Nn100102K  0.72
2010 Huber SK, Owen JP, Koop JA, King MO, Grant PR, Grant BR, Clayton DH. Ecoimmunity in Darwin's finches: invasive parasites trigger acquired immunity in the medium ground finch (Geospiza fortis). Plos One. 5: e8605. PMID 20066052 DOI: 10.1371/Journal.Pone.0008605  0.4
2010 Balakrishnan CN, Edwards SV, Clayton DF. The Zebra Finch genome and avian genomics in the wild Emu. 110: 233-241. DOI: 10.1071/Mu09087  1
2010 London SE, Clayton DF. The neurobiology of Zebra Finch song: Insights from gene expression studies Emu. 110: 219-232. DOI: 10.1071/MU09079  1
2009 Mukai M, Replogle K, Drnevich J, Wang G, Wacker D, Band M, Clayton DF, Wingfield JC. Seasonal differences of gene expression profiles in song sparrow (Melospiza melodia) hypothalamus in relation to territorial aggression. Plos One. 4: e8182. PMID 19997634 DOI: 10.1371/Journal.Pone.0008182  1
2009 Clayton DF, Balakrishnan CN, London SE. Integrating genomes, brain and behavior in the study of songbirds. Current Biology : Cb. 19: R865-73. PMID 19788884 DOI: 10.1016/J.Cub.2009.07.006  1
2009 Bergman YE, Del Borgo MP, Gopalan RD, Jalal S, Unabia SE, Ciampini M, Clayton DJ, Fletcher JM, Mulder RJ, Wilce JA, Aguilar MI, Perlmutter P. Synthesis of stapled beta3-peptides through ring-closing metathesis. Organic Letters. 11: 4438-40. PMID 19719157 DOI: 10.1021/ol901803d  0.32
2009 Dong S, Replogle KL, Hasadsri L, Imai BS, Yau PM, Rodriguez-Zas S, Southey BR, Sweedler JV, Clayton DF. Discrete molecular states in the brain accompany changing responses to a vocal signal. Proceedings of the National Academy of Sciences of the United States of America. 106: 11364-9. PMID 19541599 DOI: 10.1073/Pnas.0812998106  1
2009 London SE, Dong S, Replogle K, Clayton DF. Developmental shifts in gene expression in the auditory forebrain during the sensitive period for song learning. Developmental Neurobiology. 69: 437-50. PMID 19360720 DOI: 10.1002/Dneu.20719  1
2009 Tomaszycki ML, Peabody C, Replogle K, Clayton DF, Tempelman RJ, Wade J. Sexual differentiation of the zebra finch song system: potential roles for sex chromosome genes. Bmc Neuroscience. 10: 24. PMID 19309515 DOI: 10.1186/1471-2202-10-24  1
2009 Clayton DF, George JM, Mello CV, Siepka SM. Conservation and expression of IQ-domain-containing calpacitin gene products (neuromodulin/GAP-43, neurogranin/RC3) in the adult and developing oscine song control system. Developmental Neurobiology. 69: 124-40. PMID 19023859 DOI: 10.1002/dneu.20686  1
2009 Bush SE, Price RD, Clayton DH. Descriptions of eight new species of feather lice in the genus Columbicola (Phthiraptera: Philopteridae), with a comprehensive world checklist. The Journal of Parasitology. 95: 286-94. PMID 18855488 DOI: 10.1645/Ge-1799.1  0.4
2009 Rankin CH, Abrams T, Barry RJ, Bhatnagar S, Clayton DF, Colombo J, Coppola G, Geyer MA, Glanzman DL, Marsland S, McSweeney FK, Wilson DA, Wu CF, Thompson RF. Habituation revisited: an updated and revised description of the behavioral characteristics of habituation. Neurobiology of Learning and Memory. 92: 135-8. PMID 18854219 DOI: 10.1016/J.Nlm.2008.09.012  1
2009 Dong S, Clayton DF. Habituation in songbirds. Neurobiology of Learning and Memory. 92: 183-8. PMID 18845267 DOI: 10.1016/J.Nlm.2008.09.009  1
2008 Naurin S, Bensch S, Hansson B, Johansson T, Clayton DF, Albrekt AS, VON Schantz T, Hasselquist D. TECHNICAL ADVANCES: A microarray for large-scale genomic and transcriptional analyses of the zebra finch (Taeniopygia guttata) and other passerines. Molecular Ecology Resources. 8: 275-81. PMID 21585769 DOI: 10.1111/J.1471-8286.2007.01979.X  1
2008 Dong S, Clayton DF. Partial dissociation of molecular and behavioral measures of song habituation in adult zebra finches. Genes, Brain, and Behavior. 7: 802-9. PMID 19125865 DOI: 10.1111/j.1601-183X.2008.00423.x  1
2008 Robinson GE, Fernald RD, Clayton DF. Genes and social behavior. Science (New York, N.Y.). 322: 896-900. PMID 18988841 DOI: 10.1126/science.1159277  1
2008 Lovell PV, Clayton DF, Replogle KL, Mello CV. Birdsong "transcriptomics": neurochemical specializations of the oscine song system. Plos One. 3: e3440. PMID 18941504 DOI: 10.1371/journal.pone.0003440  1
2008 Winograd C, Clayton D, Ceman S. Expression of fragile X mental retardation protein within the vocal control system of developing and adult male zebra finches. Neuroscience. 157: 132-42. PMID 18835331 DOI: 10.1016/J.Neuroscience.2008.09.005  1
2008 Axelsson E, Hultin-Rosenberg L, Brandström M, Zwahlén M, Clayton DF, Ellegren H. Natural selection in avian protein-coding genes expressed in brain. Molecular Ecology. 17: 3008-17. PMID 18482257 DOI: 10.1111/J.1365-294X.2008.03795.X  1
2008 London SE, Clayton DF. Functional identification of sensory mechanisms required for developmental song learning. Nature Neuroscience. 11: 579-86. PMID 18391944 DOI: 10.1038/nn.2103  1
2008 Replogle K, Arnold AP, Ball GF, Band M, Bensch S, Brenowitz EA, Dong S, Drnevich J, Ferris M, George JM, Gong G, Hasselquist D, Hernandez AG, Kim R, Lewin HA, ... ... Clayton DF, et al. The Songbird Neurogenomics (SoNG) Initiative: community-based tools and strategies for study of brain gene function and evolution. Bmc Genomics. 9: 131. PMID 18366674 DOI: 10.1186/1471-2164-9-131  1
2008 Maurer JA, Elmore DE, Clayton D, Xiong L, Lester HA, Dougherty DA. Confirming the revised C-terminal domain of the MscL crystal structure. Biophysical Journal. 94: 4662-7. PMID 18326638 DOI: 10.1529/Biophysj.107.127365  0.32
2007 Sloley S, Smith S, Gandhi S, Busby JA, London S, Luksch H, Clayton DF, Bhattacharya SK. Proteomic analyses of zebra finch optic tectum and comparative histochemistry. Journal of Proteome Research. 6: 2341-50. PMID 17497909 DOI: 10.1021/Pr070126W  1
2007 Itoh Y, Melamed E, Yang X, Kampf K, Wang S, Yehya N, Van Nas A, Replogle K, Band MR, Clayton DF, Schadt EE, Lusis AJ, Arnold AP. Dosage compensation is less effective in birds than in mammals. Journal of Biology. 6: 2. PMID 17352797 DOI: 10.1186/Jbiol53  1
2007 Sloley S, Smith S, Algeciras M, Cavett V, Busby JA, London S, Clayton DF, Bhattacharya SK. Proteomic analyses of songbird (Zebra finch; Taeniopygia guttata) retina. Journal of Proteome Research. 6: 1093-100. PMID 17330945 DOI: 10.1021/pr060428i  1
2007 Owen JP, Clayton DH. Where are the parasites in the PHA response? Trends in Ecology & Evolution. 22: 228-9. PMID 17296246 DOI: 10.1016/J.Tree.2007.02.003  0.4
2007 Amaya KR, Monroe EB, Sweedler JV, Clayton DF. Lipid imaging in the zebra finch brain with secondary ion mass spectrometry International Journal of Mass Spectrometry. 260: 121-127. DOI: 10.1016/J.Ijms.2006.09.032  1
2007 Clayton DF. Molecular neurobiology of bird song Handbook of Neurochemistry and Molecular Neurobiology: Behavioral Neurochemistry, Neuroendocrinology and Molecular Neurobiology. 373-417. DOI: 10.1007/978-0-387-30405-2_9  1
2006 Huesmann GR, Clayton DF. Dynamic role of postsynaptic caspase-3 and BIRC4 in zebra finch song-response habituation. Neuron. 52: 1061-72. PMID 17178408 DOI: 10.1016/j.neuron.2006.10.033  1
2004 Becker CF, Clayton D, Shapovalov G, Lester HA, Kochendoerfer GG. On-resin assembly of a linkerless lanthanide(III)-based luminescence label and its application to the total synthesis of site-specifically labeled mechanosensitive channels. Bioconjugate Chemistry. 15: 1118-24. PMID 15366968 DOI: 10.1021/bc0498828  0.32
2004 Kruse AA, Stripling R, Clayton DF. Context-specific habituation of the zenk gene response to song in adult zebra finches. Neurobiology of Learning and Memory. 82: 99-108. PMID 15341795 DOI: 10.1016/J.Nlm.2004.05.001  1
2004 Cheng HY, Clayton DF. Activation and habituation of extracellular signal-regulated kinase phosphorylation in zebra finch auditory forebrain during song presentation. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 24: 7503-13. PMID 15329397 DOI: 10.1523/Jneurosci.1405-04.2004  1
2004 Wade J, Peabody C, Coussens P, Tempelman RJ, Clayton DF, Liu L, Arnold AP, Agate R. A cDNA microarray from the telencephalon of juvenile male and female zebra finches. Journal of Neuroscience Methods. 138: 199-206. PMID 15325128 DOI: 10.1016/J.Jneumeth.2004.04.007  1
2004 Clayton DF. Songbird genomics: methods, mechanisms, opportunities, and pitfalls. Annals of the New York Academy of Sciences. 1016: 45-60. PMID 15313769 DOI: 10.1196/annals.1298.028  1
2004 Clayton D, Shapovalov G, Maurer JA, Dougherty DA, Lester HA, Kochendoerfer GG. Total chemical synthesis and electrophysiological characterization of mechanosensitive channels from Escherichia coli and Mycobacterium tuberculosis. Proceedings of the National Academy of Sciences of the United States of America. 101: 4764-9. PMID 15041744 DOI: 10.1073/Pnas.0305693101  0.32
2003 Stripling R, Milewski L, Kruse AA, Clayton DF. Rapidly learned song-discrimination without behavioral reinforcement in adult male zebra finches (Taeniopygia guttata). Neurobiology of Learning and Memory. 79: 41-50. PMID 12482678 DOI: 10.1016/S1074-7427(02)00005-9  1
2002 Park KH, Clayton DF. Influence of restraint and acute isolation on the selectivity of the adult zebra finch zenk gene response to acoustic stimuli. Behavioural Brain Research. 136: 185-91. PMID 12385804 DOI: 10.1016/S0166-4328(02)00129-8  1
2001 Payton JE, Perrin RJ, Clayton DF, George JM. Protein-protein interactions of alpha-synuclein in brain homogenates and transfected cells. Brain Research. Molecular Brain Research. 95: 138-45. PMID 11687285 DOI: 10.1016/S0169-328X(01)00257-1  1
2001 Perrin RJ, Woods WS, Clayton DF, George JM. Exposure to long chain polyunsaturated fatty acids triggers rapid multimerization of synucleins. The Journal of Biological Chemistry. 276: 41958-62. PMID 11553616 DOI: 10.1074/jbc.M105022200  1
2001 Stripling R, Kruse AA, Clayton DF. Development of song responses in the zebra finch caudomedial neostriatum: role of genomic and electrophysiological activities. Journal of Neurobiology. 48: 163-80. PMID 11466705 DOI: 10.1002/Neu.1049  1
2001 Hartman VN, Miller MA, Clayton DF, Liu WC, Kroodsma DE, Brenowitz EA. Testosterone regulates alpha-synuclein mRNA in the avian song system. Neuroreport. 12: 943-6. PMID 11303765 DOI: 10.1097/00001756-200104170-00016  1
2001 Holloway CC, Clayton DF. Estrogen synthesis in the male brain triggers development of the avian song control pathway in vitro Nature Neuroscience. 4: 170-175. PMID 11175878 DOI: 10.1038/84001  1
2000 Clayton DF. The genomic action potential Neurobiology of Learning and Memory. 74: 185-216. PMID 11031127 DOI: 10.1006/nlme.2000.3967  1
2000 Kruse AA, Stripling R, Clayton DF. Minimal experience required for immediate-early gene induction in zebra finch neostriatum. Neurobiology of Learning and Memory. 74: 179-84. PMID 11031126 DOI: 10.1006/Nlme.2000.3968  1
2000 Perrin RJ, Woods WS, Clayton DF, George JM. Interaction of human alpha-Synuclein and Parkinson's disease variants with phospholipids. Structural analysis using site-directed mutagenesis. The Journal of Biological Chemistry. 275: 34393-8. PMID 10952980 DOI: 10.1074/jbc.M004851200  1
1999 Clayton DF, George JM. Synucleins in synaptic plasticity and neurodegenerative disorders. Journal of Neuroscience Research. 58: 120-9. PMID 10491577 DOI: 10.1002/(SICI)1097-4547(19991001)58:1<120::AID-JNR12>3.0.CO;2-E  1
1998 Clayton DF, George JM. The synucleins: a family of proteins involved in synaptic function, plasticity, neurodegeneration and disease. Trends in Neurosciences. 21: 249-54. PMID 9641537 DOI: 10.1016/S0166-2236(97)01213-7  1
1998 Irizarry MC, Growdon W, Gomez-Isla T, Newell K, George JM, Clayton DF, Hyman BT. Nigral and cortical Lewy bodies and dystrophic nigral neurites in Parkinson's disease and cortical Lewy body disease contain alpha-synuclein immunoreactivity. Journal of Neuropathology and Experimental Neurology. 57: 334-7. PMID 9600226 DOI: 10.1097/00005072-199804000-00005  1
1998 Davidson WS, Jonas A, Clayton DF, George JM. Stabilization of alpha-synuclein secondary structure upon binding to synthetic membranes. The Journal of Biological Chemistry. 273: 9443-9. PMID 9545270 DOI: 10.1074/jbc.273.16.9443  1
1997 Jin H, Clayton DF. Synelfin regulation during the critical period for song learning in normal and isolated juvenile zebra finches Neurobiology of Learning and Memory. 68: 271-284. PMID 9398589 DOI: 10.1006/nlme.1997.3795  1
1997 Jin H, Clayton DF. Localized changes in immediate-early gene regulation during sensory and motor learning in zebra finches Neuron. 19: 1049-1059. PMID 9390518 DOI: 10.1016/S0896-6273(00)80396-7  1
1997 Clayton DF. Role of gene regulation in song circuit development and song learning Journal of Neurobiology. 33: 549-571. PMID 9369459 DOI: 10.1002/(SICI)1097-4695(19971105)33:5<549::AID-NEU5>3.0.CO;2-4  1
1997 Stripling R, Volman SF, Clayton DF. Response modulation in the zebra finch neostriatum: Relationship to nuclear gene regulation Journal of Neuroscience. 17: 3883-3893. PMID 9133406 DOI: 10.1523/Jneurosci.17-10-03883.1997  1
1997 Withers GS, George JM, Banker GA, Clayton DF. Delayed localization of synelfin (synuclein, NACP) to presynaptic terminals in cultured rat hippocampal neurons. Brain Research. Developmental Brain Research. 99: 87-94. PMID 9088569 DOI: 10.1016/S0165-3806(96)00210-6  1
1996 Irizarry MC, Kim TW, McNamara M, Tanzi RE, George JM, Clayton DF, Hyman BT. Characterization of the precursor protein of the non-A beta component of senile plaques (NACP) in the human central nervous system. Journal of Neuropathology and Experimental Neurology. 55: 889-95. PMID 8759778 DOI: 10.1097/00005072-199608000-00004  1
1995 Nastiuk KL, Clayton DF. The canary androgen receptor mRNA is localized in the song control nuclei of the brain and is rapidly regulated by testosterone. Journal of Neurobiology. 26: 213-24. PMID 7707043 DOI: 10.1002/Neu.480260206  1
1995 George JM, Jin H, Woods WS, Clayton DF. Characterization of a novel protein regulated during the critical period for song learning in the zebra finch. Neuron. 15: 361-72. PMID 7646890 DOI: 10.1016/0896-6273(95)90040-3  1
1995 Mello CV, Clayton DF. Differential induction of the ZENK gene in the avian forebrain and song control circuit after metrazole-induced depolarization. Journal of Neurobiology. 26: 145-61. PMID 7536234 DOI: 10.1002/neu.480260112  1
1995 Wallace CS, Withers GS, Weiler IJ, George JM, Clayton DF, Greenough WT. Correspondence between sites of NGFI-A induction and sites of morphological plasticity following exposure to environmental complexity. Brain Research. Molecular Brain Research. 32: 211-20. PMID 7500832 DOI: 10.1016/0169-328X(95)00076-5  1
1995 Mello C, Nottebohm F, Clayton D. Repeated exposure to one song leads to a rapid and persistent decline in an immediate early gene's response to that song in zebra finch telencephalon. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 15: 6919-25. PMID 7472448 DOI: 10.1523/Jneurosci.15-10-06919.1995  1
1994 Nastiuk KL, Clayton DF. Seasonal and tissue-specific regulation of canary androgen receptor messenger ribonucleic acid. Endocrinology. 134: 640-9. PMID 8299561 DOI: 10.1210/Endo.134.2.8299561  1
1994 Mello CV, Clayton DF. Song-induced ZENK gene expression in auditory pathways of songbird brain and its relation to the song control system. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 14: 6652-66. PMID 7965067 DOI: 10.1523/Jneurosci.14-11-06652.1994  1
1994 Nastiuk KL, Mello CV, George JM, Clayton DF. Immediate-early gene responses in the avian song control system: cloning and expression analysis of the canary c-jun cDNA. Brain Research. Molecular Brain Research. 27: 299-309. PMID 7898314 DOI: 10.1016/0169-328X(94)90013-2  1
1992 Mello CV, Vicario DS, Clayton DF. Song presentation induces gene expression in the songbird forebrain. Proceedings of the National Academy of Sciences of the United States of America. 89: 6818-22. PMID 1495970 DOI: 10.1073/Pnas.89.15.6818  1
1992 George JM, Clayton DF. Differential regulation in the avian song control circuit of an mRNA predicting a highly conserved protein related to protein kinase C and the bcr oncogene. Brain Research. Molecular Brain Research. 12: 323-9. PMID 1374499 DOI: 10.1016/0169-328X(92)90134-W  1
1991 Collum RG, Clayton DF, Alt FW. Structure and expression of canary myc family genes Molecular and Cellular Biology. 11: 1770-1776. PMID 1996121 DOI: 10.1128/Mcb.11.3.1770  1
1990 Clayton DF, Huecas M. Forebrain-enriched RNAs of the canary: a population analysis using hybridization kinetics Molecular Brain Research. 7: 23-30. PMID 1688993 DOI: 10.1016/0169-328X(90)90069-P  1
1989 Clayton DF, Alvarez-Buylla A. In situ hybridization using PEG-embedded tissue and riboprobes: increased cellular detail coupled with high sensitivity. The Journal of Histochemistry and Cytochemistry : Official Journal of the Histochemistry Society. 37: 389-93. PMID 2918223 DOI: 10.1177/37.3.2918223  1
1988 Clayton DF, Huecas ME, Sinclair-Thompson EY, Nastiuk KL, Nottebohm F. Probes for rare mRNAs reveal distributed cell subsets in canary brain. Neuron. 1: 249-61. PMID 3272171 DOI: 10.1016/0896-6273(88)90146-8  1
1987 Allegra P, Sterner R, Clayton DF, Allfrey VG. Affinity chromatographic purification of nucleosomes containing transcriptionally active DNA sequences Journal of Molecular Biology. 196: 379-388. PMID 3656449 DOI: 10.1016/0022-2836(87)90698-X  1
1986 Friedman JM, Babiss LE, Clayton DF, Darnell JE. Cellular promoters incorporated into the adenovirus genome: cell specificity of albumin and immunoglobulin expression. Molecular and Cellular Biology. 6: 3791-7. PMID 2948108 DOI: 10.1128/Mcb.6.11.3791  1
1985 Clayton DF, Weiss M, Darnell JE. Liver-specific RNA metabolism in hepatoma cells: variations in transcription rates and mRNA levels. Molecular and Cellular Biology. 5: 2633-41. PMID 3841793 DOI: 10.1128/Mcb.5.10.2633  1
1985 Clayton DF, Harrelson AL, Darnell JE. Dependence of liver-specific transcription on tissue organization. Molecular and Cellular Biology. 5: 2623-32. PMID 3841792 DOI: 10.1128/Mcb.5.10.2623  1
1984 Jefferson DM, Clayton DF, Darnell JE, Reid LM. Posttranscriptional modulation of gene expression in cultured rat hepatocytes. Molecular and Cellular Biology. 4: 1929-34. PMID 6333585 DOI: 10.1128/MCB.4.9.1929  1
1983 Clayton DF, Darnell JE. Changes in liver-specific compared to common gene transcription during primary culture of mouse hepatocytes. Molecular and Cellular Biology. 3: 1552-61. PMID 6633533 DOI: 10.1128/Mcb.3.9.1552  1
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