| Year |
Citation |
Score |
| 2023 |
Zhang Y, Fu Y, Xian W, Li X, Feng Y, Bu F, Shi Y, Chen S, Velzen RV, Battenberg K, Berry AM, Salgado MG, Liu H, Yi T, Fournier P, et al. Comparative Phylogenomics and Phylotranscriptomics Provide Insights into the Genetic Complexity of Nitrogen Fixing Root Nodule Symbiosis. Plant Communications. 100671. PMID 37553834 DOI: 10.1016/j.xplc.2023.100671 |
0.385 |
|
| 2022 |
Guo C, Luo Y, Gao LM, Yi TS, Li HT, Yang JB, Li DZ. Phylogenomics and the flowering plant tree of life. Journal of Integrative Plant Biology. PMID 36416284 DOI: 10.1111/jipb.13415 |
0.369 |
|
| 2022 |
Wang ZX, Wang DJ, Yi TS. Does IR-loss promote plastome structural variation and sequence evolution? Frontiers in Plant Science. 13: 888049. PMID 36247567 DOI: 10.3389/fpls.2022.888049 |
0.385 |
|
| 2022 |
Zhao L, Yang YY, Qu XJ, Ma H, Hu Y, Li HT, Yi TS, Li DZ. Phylotranscriptomic Analyses Reveal Multiple Whole-Genome Duplication Events, the History of Diversification and Adaptations in the Araceae. Annals of Botany. PMID 35671385 DOI: 10.1093/aob/mcac062 |
0.404 |
|
| 2022 |
Ji Y, Yang J, Landis JB, Wang S, Jin L, Xie P, Liu H, Yang JB, Yi TS. Genome Skimming Contributes to Clarifying Species Limits in Section (Melanthiaceae). Frontiers in Plant Science. 13: 832034. PMID 35444671 DOI: 10.3389/fpls.2022.832034 |
0.373 |
|
| 2021 |
Li HT, Luo Y, Gan L, Ma PF, Gao LM, Yang JB, Cai J, Gitzendanner MA, Fritsch PW, Zhang T, Jin JJ, Zeng CX, Wang H, Yu WB, Zhang R, ... ... Yi TS, et al. Plastid phylogenomic insights into relationships of all flowering plant families. Bmc Biology. 19: 232. PMID 34711223 DOI: 10.1186/s12915-021-01166-2 |
0.622 |
|
| 2021 |
Wang X, Liu S, Zuo H, Zheng W, Zhang S, Huang Y, Pingcuo G, Ying H, Zhao F, Li Y, Liu J, Yi TS, Zan Y, Larkin RM, Deng X, et al. Genomic basis of high-altitude adaptation in Tibetan Prunus fruit trees. Current Biology : Cb. PMID 34314676 DOI: 10.1016/j.cub.2021.06.062 |
0.359 |
|
| 2021 |
Stull GW, Qu XJ, Parins-Fukuchi C, Yang YY, Yang JB, Yang ZY, Hu Y, Ma H, Soltis PS, Soltis DE, Li DZ, Smith SA, Yi TS. Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms. Nature Plants. PMID 34282286 DOI: 10.1038/s41477-021-00964-4 |
0.406 |
|
| 2021 |
Yang YY, Qu XJ, Zhang R, Stull GW, Yi TS. Plastid phylogenomic analyses of Fagales reveal signatures of conflict and ancient chloroplast capture. Molecular Phylogenetics and Evolution. 107232. PMID 34129935 DOI: 10.1016/j.ympev.2021.107232 |
0.425 |
|
| 2021 |
Bai HR, Oyebanji O, Zhang R, Yi TS. Plastid phylogenomic insights into the evolution of subfamily Dialioideae (Leguminosae). Plant Diversity. 43: 27-34. PMID 33778222 DOI: 10.1016/J.Pld.2020.06.008 |
0.571 |
|
| 2021 |
Zhao Y, Zhang R, Jiang K, Qi J, Hu Y, Guo J, Zhu R, Zhang T, Egan AN, Yi TS, Huang CH, Ma H. Nuclear Phylotranscriptomics/Phylogenomics Support Numerous Polyploidization Events and Hypotheses for the Evolution of Rhizobial Nitrogen-Fixing Symbiosis in Fabaceae. Molecular Plant. PMID 33631421 DOI: 10.1016/j.molp.2021.02.006 |
0.479 |
|
| 2020 |
Jin JJ, Yu WB, Yang JB, Song Y, dePamphilis CW, Yi TS, Li DZ. GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes. Genome Biology. 21: 241. PMID 32912315 DOI: 10.1186/S13059-020-02154-5 |
0.616 |
|
| 2020 |
Jin DM, Wicke S, Gan L, Yang JB, Jin JJ, Yi TS. The Loss of the Inverted Repeat in the Putranjivoid Clade of Malpighiales. Frontiers in Plant Science. 11: 942. PMID 32670335 DOI: 10.3389/Fpls.2020.00942 |
0.677 |
|
| 2020 |
Jin DM, Jin JJ, Yi TS. Plastome Structural Conservation and Evolution in the Clusioid Clade of Malpighiales. Scientific Reports. 10: 9091. PMID 32499506 DOI: 10.1038/S41598-020-66024-7 |
0.683 |
|
| 2020 |
Oyebanji O, Zhang R, Chen SY, Yi TS. New Insights Into the Plastome Evolution of the Millettioid/Phaseoloid Clade (Papilionoideae, Leguminosae). Frontiers in Plant Science. 11: 151. PMID 32210983 DOI: 10.3389/Fpls.2020.00151 |
0.568 |
|
| 2020 |
Zhang R, Wang YH, Jin JJ, Stull GW, Bruneau A, Cardoso D, de Queiroz LP, Moore MJ, Zhang SD, Chen SY, Wang J, Li DZ, Yi TS. Exploration of Plastid Phylogenomic Conflict Yields New Insights into the Deep Relationships of Leguminosae. Systematic Biology. PMID 32065640 DOI: 10.1093/Sysbio/Syaa013 |
0.67 |
|
| 2019 |
Zheng X, Yi TS. The plastid genome of Baillon (Pentadiplandraceae). Mitochondrial Dna. Part B, Resources. 4: 4002-4003. PMID 33366290 DOI: 10.1080/23802359.2019.1688102 |
0.508 |
|
| 2019 |
Wang ZX, Jin DM, Wang GD, Yi TS. The complete plastome of Mildbr. (Ctenolophonaceae). Mitochondrial Dna. Part B, Resources. 4: 3379-3380. PMID 33366002 DOI: 10.1080/23802359.2019.1673684 |
0.52 |
|
| 2019 |
Jin DM, Gan L, Jin JJ, Yi TS. The plastid genome of Pierre ex Engl. (Malpighiales). Mitochondrial Dna. Part B, Resources. 4: 2541-2542. PMID 33365617 DOI: 10.1080/23802359.2019.1639557 |
0.693 |
|
| 2019 |
Ji Y, Yang L, Chase MW, Liu C, Yang Z, Yang J, Yang JB, Yi TS. Plastome phylogenomics, biogeography, and clade diversification of Paris (Melanthiaceae). Bmc Plant Biology. 19: 543. PMID 31805856 DOI: 10.1186/S12870-019-2147-6 |
0.527 |
|
| 2019 |
Qu XJ, Fan SJ, Wicke S, Yi TS. Plastome reduction in the only parasitic gymnosperm Parasitaxus is due to losses of photosynthesis but not housekeeping genes and apparently involves the secondary gain of a large inverted repeat. Genome Biology and Evolution. PMID 31504501 DOI: 10.1093/Gbe/Evz187 |
0.438 |
|
| 2019 |
Ji Y, Liu C, Yang Z, Yang L, He Z, Wang H, Yang J, Yi T. Testing and using complete plastomes and ribosomal DNA sequences as the next generation DNA barcodes in Panax (Araliaceae). Molecular Ecology Resources. PMID 31237984 DOI: 10.1111/1755-0998.13050 |
0.463 |
|
| 2019 |
Qu XJ, Moore MJ, Li DZ, Yi TS. PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes. Plant Methods. 15: 50. PMID 31139240 DOI: 10.1186/S13007-019-0435-7 |
0.417 |
|
| 2019 |
Li HT, Yi TS, Gao LM, Ma PF, Zhang T, Yang JB, Gitzendanner MA, Fritsch PW, Cai J, Luo Y, Wang H, van der Bank M, Zhang SD, Wang QF, Wang J, et al. Origin of angiosperms and the puzzle of the Jurassic gap. Nature Plants. PMID 31061536 DOI: 10.1038/S41477-019-0421-0 |
0.506 |
|
| 2019 |
Yao G, Jin JJ, Li HT, Yang JB, Shiva Mandala V, Croley M, Mostow R, Douglas NA, Chase MW, Christenhusz MJM, Soltis DE, Soltis PS, Smith SA, Brockington SF, Moore MJ, ... Yi TS, et al. Plastid phylogenomic insights into the evolution of Caryophyllales. Molecular Phylogenetics and Evolution. PMID 30735725 DOI: 10.1016/J.Ympev.2018.12.023 |
0.687 |
|
| 2019 |
Zhang R, Jin J, Moore MJ, Yi T. Assembly and comparative analyses of the mitochondrial genome of Castanospermum australe (Papilionoideae, Leguminosae) Australian Systematic Botany. 32: 484-494. DOI: 10.1071/Sb19014 |
0.643 |
|
| 2018 |
Zhang H, Jin J, Moore MJ, Yi T, Li D. Plastome characteristics of Cannabaceae. Plant Diversity. 40: 127-137. PMID 30175293 DOI: 10.1016/J.Pld.2018.04.003 |
0.71 |
|
| 2018 |
Wang YH, Wicke S, Wang H, Jin JJ, Chen SY, Zhang SD, Li DZ, Yi TS. Plastid Genome Evolution in the Early-Diverging Legume Subfamily Cercidoideae (Fabaceae). Frontiers in Plant Science. 9: 138. PMID 29479365 DOI: 10.3389/Fpls.2018.00138 |
0.716 |
|
| 2018 |
Wariss HM, Yi T, Wang H, Zhang R. Characterization of the complete chloroplast genome of Dalbergia odorifera (Leguminosae), a rare and critically endangered legume endemic to China Conservation Genetics Resources. 10: 527-530. DOI: 10.1007/S12686-017-0866-2 |
0.518 |
|
| 2018 |
Wariss HM, Yi T, Wang H, Zhang R. The chloroplast genome of a rare and an endangered species Salweenia bouffordiana (Leguminosae) in China Conservation Genetics Resources. 10: 405-407. DOI: 10.1007/S12686-017-0836-8 |
0.509 |
|
| 2017 |
Liu P, Wen J, Yi T. Evolution of biogeographic disjunction between eastern Asia and North America in : Insights from ecological niche models. Plant Diversity. 39: 111-116. PMID 30159499 DOI: 10.1016/J.Pld.2017.04.001 |
0.401 |
|
| 2017 |
Qu XJ, Wu CS, Chaw SM, Yi TS. Insights into the Existence of Isomeric Plastomes in Cupressoideae (Cupressaceae). Genome Biology and Evolution. PMID 28431152 DOI: 10.1093/Gbe/Evx071 |
0.517 |
|
| 2017 |
Zhang SD, Jin JJ, Chen SY, Chase MW, Soltis DE, Li HT, Yang JB, Li DZ, Yi TS. Diversification of Rosaceae since the Late Cretaceous based on plastid phylogenomics. The New Phytologist. PMID 28186635 DOI: 10.1111/Nph.14461 |
0.673 |
|
| 2017 |
Yang MQ, Li DZ, Wen J, Yi TS. Phylogeny and biogeography of the amphi-Pacific genus Aphananthe. Plos One. 12: e0171405. PMID 28170425 DOI: 10.1371/Journal.Pone.0171405 |
0.461 |
|
| 2017 |
Qu XJ, Jin JJ, Chaw SM, Li DZ, Yi TS. Multiple measures could alleviate long-branch attraction in phylogenomic reconstruction of Cupressoideae (Cupressaceae). Scientific Reports. 7: 41005. PMID 28120880 DOI: 10.1038/Srep41005 |
0.63 |
|
| 2017 |
Azani N, Babineau M, Bailey CD, Banks H, Barbosa A, Pinto RB, Boatwright J, Borges L, Brown G, Bruneau A, Candido E, Cardoso D, Chung K, Clark R, Conceição Ad, ... ... Yi T, et al. A new subfamily classification of the Leguminosae based on a taxonomically comprehensive phylogeny – The Legume Phylogeny Working Group (LPWG) Taxon. 66: 44-77. DOI: 10.12705/661.3 |
0.509 |
|
| 2017 |
Wang Y, Wang H, Yi T, Wang Y. The complete chloroplast genomes of Adenolobus garipensis and Cercis glabra (Cercidoideae, Fabaceae) Conservation Genetics Resources. 9: 635-638. DOI: 10.1007/S12686-017-0744-Y |
0.537 |
|
| 2017 |
Wang Y, Qu X, Chen S, Li D, Yi T. Plastomes of Mimosoideae: structural and size variation, sequence divergence, and phylogenetic implication Tree Genetics & Genomes. 13: 41. DOI: 10.1007/S11295-017-1124-1 |
0.483 |
|
| 2016 |
Xiang Y, Huang CH, Hu Y, Wen J, Li S, Yi T, Chen H, Xiang J, Ma H. Evolution of Rosaceae fruit types based on nuclear phylogeny in the context of geological times and genome duplication. Molecular Biology and Evolution. PMID 27856652 DOI: 10.1093/Molbev/Msw242 |
0.483 |
|
| 2016 |
Zhao L, Li X, Zhang N, Zhang SD, Yi TS, Ma H, Guo ZH, Li DZ. Phylogenomic Analyses of Large-scale Nuclear Genes Provide New Insights into the Evolutionary Relationships within the Rosids. Molecular Phylogenetics and Evolution. PMID 27369455 DOI: 10.1016/J.Ympev.2016.06.007 |
0.49 |
|
| 2016 |
He SL, Wang YS, Li DZ, Yi TS. Environmental and Historical Determinants of Patterns of Genetic Differentiation in Wild Soybean (Glycine soja Sieb. et Zucc). Scientific Reports. 6: 22795. PMID 26952904 DOI: 10.1038/Srep22795 |
0.3 |
|
| 2016 |
Yao G, Drew BT, Yi TS, Yan HF, Yuan YM, Ge XJ. Phylogenetic relationships, character evolution and biogeographic diversification of Pogostemon s.l. (Lamiaceae). Molecular Phylogenetics and Evolution. PMID 26923493 DOI: 10.1016/J.Ympev.2016.01.020 |
0.502 |
|
| 2016 |
Meng J, He SL, Li DZ, Yi TS. Nuclear genetic variation of Rosa odorata var. gigantea (Rosaceae): population structure and conservation implications Tree Genetics and Genomes. 12. DOI: 10.1007/S11295-016-1024-9 |
0.385 |
|
| 2015 |
Zhang SD, Ling LZ, Yi TS. Evolution and divergence of SBP-box genes in land plants. Bmc Genomics. 16: 787. PMID 26467431 DOI: 10.1186/S12864-015-1998-Y |
0.372 |
|
| 2015 |
He SL, Yang Y, Morrell PL, Yi TS. Nucleotide Sequence Diversity and Linkage Disequilibrium of Four Nuclear Loci in Foxtail Millet (Setaria italica). Plos One. 10: e0137088. PMID 26325578 DOI: 10.1371/journal.pone.0137088 |
0.354 |
|
| 2015 |
Yi TS, Jin GH, Wen J. Chloroplast capture and intra- and inter-continental biogeographic diversification in the Asian - New World disjunct plant genus Osmorhiza (Apiaceae). Molecular Phylogenetics and Evolution. 85: 10-21. PMID 25585153 DOI: 10.1016/J.Ympev.2014.09.028 |
0.472 |
|
| 2014 |
Xie L, Yang ZY, Wen J, Li DZ, Yi TS. Biogeographic history of Pistacia (Anacardiaceae), emphasizing the evolution of the Madrean-Tethyan and the eastern Asian-Tethyan disjunctions. Molecular Phylogenetics and Evolution. 77: 136-46. PMID 24747126 DOI: 10.1016/J.Ympev.2014.04.006 |
0.463 |
|
| 2014 |
Yang Z, Yi T, Zeng L, Gong X. The population genetic structure and diversification of Aristolochia delavayi (Aristolochiaceae), an endangered species of the dry hot valleys of the Jinsha River, southwestern China Botany. 92: 579-587. DOI: 10.1139/Cjb-2013-0267 |
0.47 |
|
| 2013 |
Li R, Ma PF, Wen J, Yi TS. Complete sequencing of five araliaceae chloroplast genomes and the phylogenetic implications. Plos One. 8: e78568. PMID 24205264 DOI: 10.1371/Journal.Pone.0078568 |
0.524 |
|
| 2013 |
Wu ZY, Monro AK, Milne RI, Wang H, Yi TS, Liu J, Li DZ. Molecular phylogeny of the nettle family (Urticaceae) inferred from multiple loci of three genomes and extensive generic sampling. Molecular Phylogenetics and Evolution. 69: 814-27. PMID 23850510 DOI: 10.1016/J.Ympev.2013.06.022 |
0.524 |
|
| 2013 |
Yahara T, Javadi F, Onoda Y, de Queiroz LP, Faith DP, Prado DE, Akasaka M, Kadoya T, Ishihama F, Davies S, Slik JWF, Yi T, Ma K, Bin C, Darnaedi D, et al. Global legume diversity assessment: Concepts, key indicators, and strategies Taxon. 62: 249-266. DOI: 10.12705/622.12 |
0.39 |
|
| 2013 |
Li X, Zhang S, Yang Z, Song K, Yi T. Conservation genetics and population diversity of Erigeron breviscapus (Asteraceae), an important Chinese herb Biochemical Systematics and Ecology. 49: 156-166. DOI: 10.1016/J.Bse.2013.03.009 |
0.313 |
|
| 2012 |
He S, Wang Y, Volis S, Li D, Yi T. Genetic diversity and population structure: implications for conservation of wild soybean (Glycine soja Sieb. et Zucc) based on nuclear and chloroplast microsatellite variation. International Journal of Molecular Sciences. 13: 12608-28. PMID 23202917 DOI: 10.3390/Ijms131012608 |
0.386 |
|
| 2012 |
Li R, Yi T, Li H. Is Remusatia (araceae) monophyletic? Evidence from three plastid regions. International Journal of Molecular Sciences. 13: 71-83. PMID 22312239 DOI: 10.3390/Ijms13010071 |
0.419 |
|
| 2011 |
Li X, Song K, Yang J, Yi T. Isolation and characterization of 11 new microsatellite loci in Erigeron breviscapus (Asteraceae), an important Chinese traditional herb. International Journal of Molecular Sciences. 12: 7265-70. PMID 22072946 DOI: 10.3390/Ijms12107265 |
0.36 |
|
| 2011 |
Lu JM, Li DZ, Lutz S, Soejima A, Yi T, Wen J. Biogeographic disjunction between eastern Asia and North America in the Adiantum pedatum complex (Pteridaceae). American Journal of Botany. 98: 1680-93. PMID 21965133 DOI: 10.3732/Ajb.1100125 |
0.383 |
|
| 2011 |
Zhang SD, Soltis DE, Yang Y, Li DZ, Yi TS. Multi-gene analysis provides a well-supported phylogeny of Rosales. Molecular Phylogenetics and Evolution. 60: 21-8. PMID 21540119 DOI: 10.1016/J.Ympev.2011.04.008 |
0.458 |
|
| 2011 |
Meng J, Fougère-Danezan M, Zhang L, Li D, Yi T. Untangling the hybrid origin of the Chinese tea roses: evidence from DNA sequences of single-copy nuclear and chloroplast genes Plant Systematics and Evolution. 297: 157-170. DOI: 10.1007/S00606-011-0504-5 |
0.339 |
|
| 2010 |
Xie L, Yi TS, Li R, Li DZ, Wen J. Evolution and biogeographic diversification of the witch-hazel genus (Hamamelis L., Hamamelidaceae) in the Northern Hemisphere. Molecular Phylogenetics and Evolution. 56: 675-89. PMID 20171295 DOI: 10.1016/J.Ympev.2010.02.018 |
0.468 |
|
| 2010 |
Song K, Wang Y, Yi T, Yang Z. Karyological studies of Erigeron breviscapus and related species Caryologia. 63: 176-183. DOI: 10.1080/00087114.2010.10589724 |
0.365 |
|
| 2009 |
Meng J, Li D, Yi T, Yang J, Zhao X. Development and characterization of microsatellite loci for Rosa odorata var. gigantea Rehder & E. H. Wilson (Rosaceae). Conservation Genetics. 10: 1973-1976. DOI: 10.1007/S10592-009-9871-7 |
0.366 |
|
| 2008 |
Yi T, Wen J, Golan-Goldhirsh A, Parfitt DE. Phylogenetics and reticulate evolution in Pistacia (Anacardiaceae). American Journal of Botany. 95: 241-51. PMID 21632348 DOI: 10.3732/Ajb.95.2.241 |
0.437 |
|
| 2008 |
Wen J, Berggren ST, Lee C, Ickert-Bond S, Yi T, Yoo K, Xie L, Shaw J, Potter D. Phylogenetic inferences in Prunus (Rosaceae) using chloroplast ndhF and nuclear ribosomal ITS sequences Journal of Systematics and Evolution. 46: 322-332. DOI: 10.3724/Sp.J.1002.2008.08065 |
0.432 |
|
| 2007 |
Dillon MO, Tu T, Soejima A, Yi T, Nie Z, Tye A, Wen J. Phylogeny of Nolana (Nolaneae, Solanoideae, Solanaceae) as inferred from granule-bound starch synthase I (GBSSI) sequences Taxon. 56: 1000-1011. DOI: 10.2307/25065900 |
0.415 |
|
| 2007 |
Yi T, Miller AJ, Wen J. Phylogeny of Rhus (Anacardiaceae) based on sequences of nuclear Nia-i3 intron and chloroplast trnC-trnD Systematic Botany. 32: 379-391. DOI: 10.1600/036364407781179635 |
0.393 |
|
| 2005 |
Yi T, Li H, Li D. Chromosome variation in the genus Pinellia (Araceae) in China and Japan Botanical Journal of the Linnean Society. 147: 449-455. DOI: 10.1111/J.1095-8339.2005.00381.X |
0.309 |
|
| 2004 |
Yi T, Miller AJ, Wen J. Phylogenetic and biogeographic diversification of Rhus (Anacardiaceae) in the Northern Hemisphere. Molecular Phylogenetics and Evolution. 33: 861-79. PMID 15522809 DOI: 10.1016/J.Ympev.2004.07.006 |
0.438 |
|
| 2004 |
Yi T, Lowry PP, Plunkett GM, Wen J. Chromosomal evolution in Araliaceae and close relatives Taxon. 53: 987-1005. DOI: 10.2307/4135565 |
0.405 |
|
| Show low-probability matches. |