Richard M. Clark - Publications

Affiliations: 
2001 Stanford University, Palo Alto, CA 

18 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Bajda S, Dermauw W, Greenhalgh R, Nauen R, Tirry L, Clark RM, Van Leeuwen T. Transcriptome profiling of a spirodiclofen susceptible and resistant strain of the European red mite Panonychus ulmi using strand-specific RNA-seq. Bmc Genomics. 16: 974. PMID 26581334 DOI: 10.1186/s12864-015-2157-1  0.56
2015 Dubin MJ, Zhang P, Meng D, Remigereau MS, Osborne EJ, Paolo Casale F, Drewe P, Kahles A, Jean G, Vilhjálmsson B, Jagoda J, Irez S, Voronin V, Song Q, Long Q, ... ... Clark RM, et al. DNA methylation in Arabidopsis has a genetic basis and shows evidence of local adaptation. Elife. 4: e05255. PMID 25939354 DOI: 10.7554/Elife.05255  0.56
2014 Jali SS, Rosloski SM, Janakirama P, Steffen JG, Zhurov V, Berleth T, Clark RM, Grbic V. A plant-specific HUA2-LIKE (HULK) gene family in Arabidopsis thaliana is essential for development. The Plant Journal : For Cell and Molecular Biology. 80: 242-54. PMID 25070081 DOI: 10.1111/tpj.12629  0.56
2014 Zhurov V, Navarro M, Bruinsma KA, Arbona V, Santamaria ME, Cazaux M, Wybouw N, Osborne EJ, Ens C, Rioja C, Vermeirssen V, Rubio-Somoza I, Krishna P, Diaz I, Schmid M, ... ... Clark RM, et al. Reciprocal responses in the interaction between Arabidopsis and the cell-content-feeding chelicerate herbivore spider mite. Plant Physiology. 164: 384-99. PMID 24285850 DOI: 10.1104/Pp.113.231555  0.56
2011 Grbić M, Van Leeuwen T, Clark RM, Rombauts S, Rouzé P, Grbić V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernández-Crespo P, Diaz I, Martinez M, Navajas M, Sucena É, et al. The genome of Tetranychus urticae reveals herbivorous pest adaptations. Nature. 479: 487-92. PMID 22113690 DOI: 10.1038/Nature10640  0.56
2011 Gan X, Stegle O, Behr J, Steffen JG, Drewe P, Hildebrand KL, Lyngsoe R, Schultheiss SJ, Osborne EJ, Sreedharan VT, Kahles A, Bohnert R, Jean G, Derwent P, Kersey P, ... ... Clark RM, et al. Multiple reference genomes and transcriptomes for Arabidopsis thaliana. Nature. 477: 419-23. PMID 21874022 DOI: 10.1038/Nature10414  0.56
2011 Hu TT, Pattyn P, Bakker EG, Cao J, Cheng JF, Clark RM, Fahlgren N, Fawcett JA, Grimwood J, Gundlach H, Haberer G, Hollister JD, Ossowski S, Ottilar RP, Salamov AA, et al. The Arabidopsis lyrata genome sequence and the basis of rapid genome size change. Nature Genetics. 43: 476-81. PMID 21478890 DOI: 10.1038/Ng.807  0.56
2010 Ossowski S, Schneeberger K, Lucas-Lledó JI, Warthmann N, Clark RM, Shaw RG, Weigel D, Lynch M. The rate and molecular spectrum of spontaneous mutations in Arabidopsis thaliana. Science (New York, N.Y.). 327: 92-4. PMID 20044577 DOI: 10.1126/Science.1180677  0.56
2009 McNally KL, Childs KL, Bohnert R, Davidson RM, Zhao K, Ulat VJ, Zeller G, Clark RM, Hoen DR, Bureau TE, Stokowski R, Ballinger DG, Frazer KA, Cox DR, Padhukasahasram B, et al. Genomewide SNP variation reveals relationships among landraces and modern varieties of rice. Proceedings of the National Academy of Sciences of the United States of America. 106: 12273-8. PMID 19597147 DOI: 10.1073/Pnas.0900992106  0.56
2008 Zeller G, Clark RM, Schneeberger K, Bohlen A, Weigel D, Rätsch G. Detecting polymorphic regions in Arabidopsis thaliana with resequencing microarrays. Genome Research. 18: 918-29. PMID 18323538 DOI: 10.1101/Gr.070169.107  0.56
2007 Weber A, Clark RM, Vaughn L, Sánchez-Gonzalez Jde J, Yu J, Yandell BS, Bradbury P, Doebley J. Major regulatory genes in maize contribute to standing variation in teosinte (Zea mays ssp. parviglumis). Genetics. 177: 2349-59. PMID 17947410 DOI: 10.1534/Genetics.107.080424  0.56
2007 Kim S, Plagnol V, Hu TT, Toomajian C, Clark RM, Ossowski S, Ecker JR, Weigel D, Nordborg M. Recombination and linkage disequilibrium in Arabidopsis thaliana. Nature Genetics. 39: 1151-5. PMID 17676040 DOI: 10.1038/Ng2115  0.56
2007 Tang C, Toomajian C, Sherman-Broyles S, Plagnol V, Guo YL, Hu TT, Clark RM, Nasrallah JB, Weigel D, Nordborg M. The evolution of selfing in Arabidopsis thaliana. Science (New York, N.Y.). 317: 1070-2. PMID 17656687 DOI: 10.1126/Science.1143153  0.56
2007 Clark RM, Schweikert G, Toomajian C, Ossowski S, Zeller G, Shinn P, Warthmann N, Hu TT, Fu G, Hinds DA, Chen H, Frazer KA, Huson DH, Schölkopf B, Nordborg M, et al. Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana. Science (New York, N.Y.). 317: 338-42. PMID 17641193 DOI: 10.1126/Science.1138632  0.56
2006 Clark RM, Wagler TN, Quijada P, Doebley J. A distant upstream enhancer at the maize domestication gene tb1 has pleiotropic effects on plant and inflorescent architecture. Nature Genetics. 38: 594-7. PMID 16642024 DOI: 10.1038/Ng1784  0.56
2005 Clark RM, Tavaré S, Doebley J. Estimating a nucleotide substitution rate for maize from polymorphism at a major domestication locus. Molecular Biology and Evolution. 22: 2304-12. PMID 16079248 DOI: 10.1093/Molbev/Msi228  0.56
2004 Clark RM, Linton E, Messing J, Doebley JF. Pattern of diversity in the genomic region near the maize domestication gene tb1. Proceedings of the National Academy of Sciences of the United States of America. 101: 700-7. PMID 14701910 DOI: 10.1073/Pnas.2237049100  0.56
2000 Clark RM, Marker PC, Kingsley DM. A novel candidate gene for mouse and human preaxial polydactyly with altered expression in limbs of Hemimelic extra-toes mutant mice. Genomics. 67: 19-27. PMID 10945466 DOI: 10.1006/Geno.2000.6225  0.56
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