| Year |
Citation |
Score |
| 2023 |
Bera S, Amino R, Cockburn IA, Ganusov VV. Heterogeneity in killing efficacy of individual effector CD8 T cells against Plasmodium liver stages. Proceedings. Biological Sciences. 290: 20232280. PMID 38018100 DOI: 10.1098/rspb.2023.2280 |
0.354 |
|
| 2022 |
Zenkov VS, O'Connor JH, Cockburn IA, Ganusov VV. A New Method Based on the von Mises-Fisher Distribution Shows that a Minority of Liver-Localized CD8 T Cells Display Hard-To-Detect Attraction to -Infected Hepatocytes. Frontiers in Bioinformatics. 1: 770448. PMID 36303744 DOI: 10.3389/fbinf.2021.770448 |
0.308 |
|
| 2022 |
Rajakaruna H, Ganusov VV. Mathematical Modeling to Guide Experimental Design: T Cell Clustering as a Case Study. Bulletin of Mathematical Biology. 84: 103. PMID 35978047 DOI: 10.1007/s11538-022-01063-x |
0.318 |
|
| 2020 |
Aleshnick M, Ganusov VV, Nasir G, Yenokyan G, Sinnis P. Experimental determination of the force of malaria infection reveals a non-linear relationship to mosquito sporozoite loads. Plos Pathogens. 16: e1008181. PMID 32453765 DOI: 10.1371/Journal.Ppat.1008181 |
0.357 |
|
| 2019 |
Kelemen RK, Rajakaruna H, Cockburn IA, Ganusov VV. Clustering of Activated CD8 T Cells Around Malaria-Infected Hepatocytes Is Rapid and Is Driven by Antigen-Specific Cells. Frontiers in Immunology. 10: 2153. PMID 31616407 DOI: 10.3389/Fimmu.2019.02153 |
0.392 |
|
| 2019 |
Hoft SG, Sallin MA, Kauffman KD, Sakai S, Ganusov VV, Barber DL. Erratum for Hoft et al., "The Rate of CD4 T Cell Entry into the Lungs during Mycobacterium tuberculosis Infection Is Determined by Partial and Opposing Effects of Multiple Chemokine Receptors". Infection and Immunity. 87. PMID 31434760 DOI: 10.1128/Iai.00491-19 |
0.376 |
|
| 2019 |
McDaniel MM, Ganusov VV. Estimating Residence Times of Lymphocytes in Ovine Lymph Nodes. Frontiers in Immunology. 10: 1492. PMID 31379805 DOI: 10.3389/Fimmu.2019.01492 |
0.336 |
|
| 2019 |
Vella LA, Buggert M, Manne S, Herati RS, Sayin I, Kuri-Cervantes L, Bukh Brody I, O'Boyle KC, Kaprielian H, Giles JR, Nguyen S, Muselman A, Antel JP, Bar-Or A, Johnson ME, ... ... Ganusov VV, et al. T follicular helper cells in human efferent lymph retain lymphoid characteristics. The Journal of Clinical Investigation. 130. PMID 31264971 DOI: 10.1172/Jci125628 |
0.34 |
|
| 2019 |
Hoft SG, Sallin MA, Kauffman KD, Sakai S, Ganusov VV, Barber DL. The rate of CD4 T cell entry into the lungs during infection is determined by partial and opposing effects of multiple chemokine receptors. Infection and Immunity. PMID 30962399 DOI: 10.1128/Iai.00841-18 |
0.338 |
|
| 2019 |
Yang Y, Ganusov VV. Defining Kinetic Properties of HIV-Specific CD8⁺ T-Cell Responses in Acute Infection. Microorganisms. 7. PMID 30836625 DOI: 10.3390/microorganisms7030069 |
0.348 |
|
| 2018 |
Bohrer AC, Tocheny C, Assmann M, Ganusov VV, Mayer-Barber KD. Cutting Edge: IL-1R1 Mediates Host Resistance to by -Protection of Infected Cells. Journal of Immunology (Baltimore, Md. : 1950). PMID 30068597 DOI: 10.4049/Jimmunol.1800438 |
0.306 |
|
| 2018 |
Song H, Giorgi EE, Ganusov VV, Cai F, Athreya G, Yoon H, Carja O, Hora B, Hraber P, Romero-Severson E, Jiang C, Li X, Wang S, Li H, Salazar-Gonzalez JF, et al. Tracking HIV-1 recombination to resolve its contribution to HIV-1 evolution in natural infection. Nature Communications. 9: 1928. PMID 29765018 DOI: 10.1038/S41467-018-04217-5 |
0.329 |
|
| 2018 |
Ganusov VV. Time Intervals in Sequence Sampling, Not Data Modifications, Have a Major Impact on Estimates of HIV Escape Rates. Viruses. 10. PMID 29495443 DOI: 10.3390/V10030099 |
0.451 |
|
| 2018 |
Yang Y, Ganusov VV. Kinetics of HIV-Specific CTL Responses Plays a Minimal Role in Determining HIV Escape Dynamics. Frontiers in Immunology. 9: 140. PMID 29472921 DOI: 10.3389/Fimmu.2018.00140 |
0.424 |
|
| 2017 |
Panteleev AV, Nikitina IY, Burmistrova IA, Kosmiadi GA, Radaeva TV, Amansahedov RB, Sadikov PV, Serdyuk YV, Larionova EE, Bagdasarian TR, Chernousova LN, Ganusov VV, Lyadova IV. Severe Tuberculosis in Humans Correlates Best with Neutrophil Abundance and Lymphocyte Deficiency and Does Not Correlate with Antigen-Specific CD4 T-Cell Response. Frontiers in Immunology. 8: 963. PMID 28871253 DOI: 10.3389/Fimmu.2017.00963 |
0.318 |
|
| 2017 |
McNamara HA, Cai Y, Wagle MV, Sontani Y, Roots CM, Miosge LA, O'Connor JH, Sutton HJ, Ganusov VV, Heath WR, Bertolino P, Goodnow CG, Parish IA, Enders A, Cockburn IA. Up-regulation of LFA-1 allows liver-resident memory T cells to patrol and remain in the hepatic sinusoids. Science Immunology. 2. PMID 28707003 DOI: 10.1126/Sciimmunol.Aaj1996 |
0.373 |
|
| 2017 |
Wang C, Jiang C, Gao N, Zhang K, Liu D, Wang W, Cong Z, Qin C, Ganusov VV, Ferrari G, LaBranche C, Montefiori DC, Kong W, Yu X, Gao F. Immunologic and Virologic Mechanisms for Partial Protection from Intravenous Challenge by an Integration-Defective SIV Vaccine. Viruses. 9. PMID 28574482 DOI: 10.3390/V9060135 |
0.309 |
|
| 2016 |
McDaniel MM, Krishna N, Handagama WG, Eda S, Ganusov VV. Quantifying Limits on Replication, Death, and Quiescence of Mycobacterium tuberculosis in Mice. Frontiers in Microbiology. 7: 862. PMID 27379030 DOI: 10.3389/Fmicb.2016.00862 |
0.406 |
|
| 2016 |
Sakai S, Kauffman KD, Sallin MA, Sharpe AH, Young HA, Ganusov VV, Barber DL. CD4 T Cell-Derived IFN-γ Plays a Minimal Role in Control of Pulmonary Mycobacterium tuberculosis Infection and Must Be Actively Repressed by PD-1 to Prevent Lethal Disease. Plos Pathogens. 12: e1005667. PMID 27244558 DOI: 10.1371/Journal.Ppat.1005667 |
0.419 |
|
| 2015 |
Leviyang S, Ganusov VV. Broad CTL Response in Early HIV Infection Drives Multiple Concurrent CTL Escapes. Plos Computational Biology. 11: e1004492. PMID 26506433 DOI: 10.1371/Journal.Pcbi.1004492 |
0.391 |
|
| 2015 |
Ganusov VV, Klinkenberg D, Bakker D, Koets AP. Evaluating contribution of the cellular and humoral immune responses to the control of shedding of Mycobacterium avium spp. paratuberculosis in cattle. Veterinary Research. 46: 62. PMID 26092254 DOI: 10.1186/S13567-015-0204-1 |
0.363 |
|
| 2015 |
Noecker C, Schaefer K, Zaccheo K, Yang Y, Day J, Ganusov VV. Simple mathematical models do not accurately predict early SIV dynamics. Viruses. 7: 1189-217. PMID 25781919 DOI: 10.3390/V7031189 |
0.411 |
|
| 2015 |
White CE, Villarino NF, Sloan SS, Ganusov VV, Schmidt NW. Plasmodium suppresses expansion of T cell responses to heterologous infections. Journal of Immunology (Baltimore, Md. : 1950). 194: 697-708. PMID 25505280 DOI: 10.4049/Jimmunol.1401745 |
0.462 |
|
| 2014 |
Le D, Miller JD, Ganusov VV. Mathematical modeling provides kinetic details of the human immune response to vaccination. Frontiers in Cellular and Infection Microbiology. 4: 177. PMID 25621280 DOI: 10.3389/Fcimb.2014.00177 |
0.44 |
|
| 2014 |
Kelemen RK, He GF, Woo HL, Lane T, Rempe C, Wang J, Cockburn IA, Amino R, Ganusov VV, Berry MW. Classification of T cell movement tracks allows for prediction of cell function. International Journal of Computational Biology and Drug Design. 7: 113-29. PMID 24878724 DOI: 10.1504/Ijcbdd.2014.061655 |
0.372 |
|
| 2014 |
Magombedze G, Eda S, Ganusov VV. Competition for Antigen between Th1 and Th2 Responses Determines the Timing of the Immune Response Switch during Mycobaterium avium Subspecies paratuberulosis Infection in Ruminants Plos Computational Biology. 10. PMID 24415928 DOI: 10.1371/Journal.Pcbi.1003414 |
0.39 |
|
| 2013 |
Ganusov VV, Neher RA, Perelson AS. Mathematical modeling of escape of HIV from cytotoxic T lymphocyte responses. Journal of Statistical Mechanics (Online). 2013: P01010. PMID 24660019 DOI: 10.1088/1742-5468/2013/01/P01010 |
0.399 |
|
| 2013 |
Magombedze G, Reddy PB, Eda S, Ganusov VV. Cellular and population plasticity of helper CD4(+) T cell responses. Frontiers in Physiology. 4: 206. PMID 23966946 DOI: 10.3389/Fphys.2013.00206 |
0.462 |
|
| 2013 |
Cockburn IA, Amino R, Kelemen RK, Kuo SC, Tse SW, Radtke A, Mac-Daniel L, Ganusov VV, Zavala F, Ménard R. In vivo imaging of CD8+ T cell-mediated elimination of malaria liver stages. Proceedings of the National Academy of Sciences of the United States of America. 110: 9090-5. PMID 23674673 DOI: 10.1073/Pnas.1303858110 |
0.421 |
|
| 2013 |
Liu MK, Hawkins N, Ritchie AJ, Ganusov VV, Whale V, Brackenridge S, Li H, Pavlicek JW, Cai F, Rose-Abrahams M, Treurnicht F, Hraber P, Riou C, Gray C, Ferrari G, et al. Vertical T cell immunodominance and epitope entropy determine HIV-1 escape. The Journal of Clinical Investigation. 123: 380-93. PMID 23221345 DOI: 10.1172/Jci65330 |
0.402 |
|
| 2013 |
Ganusov VV, De Boer RJ. A mechanistic model for bromodeoxyuridine dilution naturally explains labelling data of self-renewing T cell populations. Journal of the Royal Society, Interface. 10: 20120617. PMID 23034350 DOI: 10.1098/Rsif.2013.0100 |
0.415 |
|
| 2012 |
Nikitina IY, Kondratuk NA, Kosmiadi GA, Amansahedov RB, Vasilyeva IA, Ganusov VV, Lyadova IV. Mtb-specific CD27low CD4 T cells as markers of lung tissue destruction during pulmonary tuberculosis in humans. Plos One. 7: e43733. PMID 22937086 DOI: 10.1371/Journal.Pone.0043733 |
0.421 |
|
| 2012 |
Louzoun Y, Ganusov VV. Evolution of viral life-cycle in response to cytotoxic T lymphocyte-mediated immunity. Journal of Theoretical Biology. 310: 3-13. PMID 22735670 DOI: 10.1016/J.Jtbi.2012.06.020 |
0.389 |
|
| 2012 |
Bar KJ, Tsao CY, Iyer SS, Decker JM, Yang Y, Bonsignori M, Chen X, Hwang KK, Montefiori DC, Liao HX, Hraber P, Fischer W, Li H, Wang S, Sterrett S, ... ... Ganusov VV, et al. Early low-titer neutralizing antibodies impede HIV-1 replication and select for virus escape. Plos Pathogens. 8: e1002721. PMID 22693447 DOI: 10.1371/Journal.Ppat.1002721 |
0.33 |
|
| 2012 |
Riou C, Ganusov VV, Campion S, Mlotshwa M, Liu MK, Whale VE, Goonetilleke N, Borrow P, Ferrari G, Betts MR, Haynes BF, McMichael AJ, Gray CM. Distinct kinetics of Gag-specific CD4+ and CD8+ T cell responses during acute HIV-1 infection. Journal of Immunology (Baltimore, Md. : 1950). 188: 2198-206. PMID 22287716 DOI: 10.4049/Jimmunol.1102813 |
0.409 |
|
| 2011 |
Ganusov VV, Goonetilleke N, Liu MK, Ferrari G, Shaw GM, McMichael AJ, Borrow P, Korber BT, Perelson AS. Fitness costs and diversity of the cytotoxic T lymphocyte (CTL) response determine the rate of CTL escape during acute and chronic phases of HIV infection. Journal of Virology. 85: 10518-28. PMID 21835793 DOI: 10.1128/Jvi.00655-11 |
0.437 |
|
| 2011 |
Ganusov VV, Barber DL, De Boer RJ. Killing of targets by CD8 T cells in the mouse spleen follows the law of mass action. Plos One. 6: e15959. PMID 21283669 DOI: 10.1371/Journal.Pone.0015959 |
0.444 |
|
| 2010 |
Zilman A, Ganusov VV, Perelson AS. Stochastic models of lymphocyte proliferation and death. Plos One. 5. PMID 20941358 DOI: 10.1371/Journal.Pone.0012775 |
0.376 |
|
| 2010 |
Fischer W, Ganusov VV, Giorgi EE, Hraber PT, Keele BF, Leitner T, Han CS, Gleasner CD, Green L, Lo CC, Nag A, Wallstrom TC, Wang S, McMichael AJ, Haynes BF, et al. Transmission of single HIV-1 genomes and dynamics of early immune escape revealed by ultra-deep sequencing. Plos One. 5: e12303. PMID 20808830 DOI: 10.1371/Journal.Pone.0012303 |
0.404 |
|
| 2010 |
Ganusov VV, Lukacher AE, Byers AM. Persistence of viral infection despite similar killing efficacy of antiviral CD8(+) T cells during acute and chronic phases of infection. Virology. 405: 193-200. PMID 20580390 DOI: 10.1016/J.Virol.2010.05.029 |
0.462 |
|
| 2010 |
Ganusov VV, Borghans JA, De Boer RJ. Explicit kinetic heterogeneity: mathematical models for interpretation of deuterium labeling of heterogeneous cell populations. Plos Computational Biology. 6: e1000666. PMID 20140186 DOI: 10.1371/Journal.Pcbi.1000666 |
0.345 |
|
| 2010 |
Goonetilleke N, Liu M, Ganusov V, Giorgi E, Salazar J, Li H, Kirchner J, Turnbull E, Bourne V, Moore S, Yang H, Keele B, Borrow P, Cohen M, Perelson A, et al. The Role of T Cell Immunity in the Control of HIV Infection International Journal of Infectious Diseases. 14: e19-e20. DOI: 10.1016/J.Ijid.2010.02.1528 |
0.412 |
|
| 2009 |
Goonetilleke N, Liu MK, Salazar-Gonzalez JF, Ferrari G, Giorgi E, Ganusov VV, Keele BF, Learn GH, Turnbull EL, Salazar MG, Weinhold KJ, Moore S, Letvin N, Haynes BF, et al. The first T cell response to transmitted/founder virus contributes to the control of acute viremia in HIV-1 infection. The Journal of Experimental Medicine. 206: 1253-72. PMID 19487423 DOI: 10.1084/Jem.20090365 |
0.445 |
|
| 2009 |
Asquith B, Borghans JA, Ganusov VV, Macallan DC. Lymphocyte kinetics in health and disease. Trends in Immunology. 30: 182-9. PMID 19286425 DOI: 10.1016/J.It.2009.01.003 |
0.305 |
|
| 2009 |
Liu M, Ferrari G, Salazar J, Keele B, Tanner R, Hraber P, Giorgi E, Ganusov V, Learn G, Salazar M, Moore S, Digleria K, Yu Z, Rostron T, DeBoer C, et al. OA06-04. The role of early T-cell responses in subjects with acute HIV-1 infection Retrovirology. 6. DOI: 10.1186/1742-4690-6-S3-O40 |
0.385 |
|
| 2009 |
Asquith B, Borghans JA, Ganusov VV, Macallan DC. Corrigendum: Lymphocyte kinetics in health and disease Trends in Immunology. 30: 467. DOI: 10.1016/J.It.2009.07.013 |
0.406 |
|
| 2008 |
Ganusov VV, De Boer RJ. Estimating in vivo death rates of targets due to CD8 T-cell-mediated killing. Journal of Virology. 82: 11749-57. PMID 18815293 DOI: 10.1128/Jvi.01128-08 |
0.47 |
|
| 2008 |
Ganusov VV, De Boer RJ. Tissue distribution of lymphocytes and plasma cells and the role of the gut: response to Pabst et al. Trends in Immunology. 29: 209-210. DOI: 10.1016/J.It.2008.02.007 |
0.305 |
|
| 2007 |
Ganusov VV, De Boer RJ. Do most lymphocytes in humans really reside in the gut? Trends in Immunology. 28: 514-8. PMID 17964854 DOI: 10.1016/J.It.2007.08.009 |
0.367 |
|
| 2007 |
Ganusov VV. Discriminating between different pathways of memory CD8+ T cell differentiation. Journal of Immunology (Baltimore, Md. : 1950). 179: 5006-13. PMID 17911585 DOI: 10.4049/Jimmunol.179.8.5006 |
0.464 |
|
| 2007 |
Althaus CL, Ganusov VV, De Boer RJ. Dynamics of CD8+ T cell responses during acute and chronic lymphocytic choriomeningitis virus infection. Journal of Immunology (Baltimore, Md. : 1950). 179: 2944-51. PMID 17709509 DOI: 10.4049/Jimmunol.179.5.2944 |
0.46 |
|
| 2007 |
Ganusov VV, Milutinović D, De Boer RJ. IL-2 regulates expansion of CD4+ T cell populations by affecting cell death: insights from modeling CFSE data. Journal of Immunology (Baltimore, Md. : 1950). 179: 950-7. PMID 17617586 DOI: 10.4049/Jimmunol.179.2.950 |
0.367 |
|
| 2006 |
De Boer RJ, Ganusov VV, Milutinović D, Hodgkin PD, Perelson AS. Estimating lymphocyte division and death rates from CFSE data. Bulletin of Mathematical Biology. 68: 1011-31. PMID 16832737 DOI: 10.1007/S11538-006-9094-8 |
0.407 |
|
| 2006 |
Ganusov VV, Antia R. Imperfect vaccines and the evolution of pathogens causing acute infections in vertebrates. Evolution; International Journal of Organic Evolution. 60: 957-69. PMID 16817536 DOI: 10.1111/J.0014-3820.2006.Tb01174.X |
0.578 |
|
| 2006 |
Ganusov VV, Pilyugin SS, Ahmed R, Antia R. How does cross-reactive stimulation affect the longevity of CD8+ T cell memory? Plos Computational Biology. 2: e55. PMID 16789812 DOI: 10.1371/Journal.Pcbi.0020055 |
0.595 |
|
| 2006 |
Ganusov VV, De Boer RJ. Estimating Costs and Benefits of CTL Escape Mutations in SIV/HIV Infection. Plos Computational Biology. 2: e24. PMID 16604188 DOI: 10.1371/Journal.Pcbi.0020024 |
0.37 |
|
| 2006 |
Ganusov VV, Pilyugin SS, Ahmed R, Antia R. Correction: How Does Cross-Reactive Stimulation Affect the Longevity of CD8+ T Cell Memory? Plos Computational Biology. 2: e97. DOI: 10.1371/Journal.Pcbi.0020097 |
0.583 |
|
| 2006 |
Ganusov VV, Pilyugin SS, de Boer RJ, Murali-Krishna K, Ahmed R, Antia R. Erratum to “Quantifying cell turnover using CFSE data” [J. Immunol. Methods (298) (2005) 183] Journal of Immunological Methods. 317: 186-187. DOI: 10.1016/J.Jim.2006.09.008 |
0.606 |
|
| 2005 |
Ganusov VV, Antia R. Pathology during acute infections: contributions of intracellular pathogens and the CTL response. Biology Letters. 1: 239-42. PMID 17148176 DOI: 10.1098/Rsbl.2004.0276 |
0.626 |
|
| 2005 |
Ganusov VV, Pilyugin SS, de Boer RJ, Murali-Krishna K, Ahmed R, Antia R. Quantifying cell turnover using CFSE data. Journal of Immunological Methods. 298: 183-200. PMID 15847808 DOI: 10.1016/J.Jim.2005.01.011 |
0.601 |
|
| 2005 |
Antia R, Ganusov VV, Ahmed R. The role of models in understanding CD8+ T-cell memory. Nature Reviews. Immunology. 5: 101-11. PMID 15662368 DOI: 10.1038/Nri1550 |
0.62 |
|
| 2003 |
Pilyugin SS, Ganusov VV, Murali-Krishna K, Ahmed R, Antia R. The rescaling method for quantifying the turnover of cell populations. Journal of Theoretical Biology. 225: 275-83. PMID 14575660 DOI: 10.1016/S0022-5193(03)00245-5 |
0.617 |
|
| 2003 |
Ganusov VV. The role of the cytotoxic T-lymphocyte response and virus cytopathogenicity in the virus decline during antiviral therapy. Proceedings. Biological Sciences. 270: 1513-8. PMID 12965018 DOI: 10.1098/Rspb.2003.2401 |
0.434 |
|
| 2003 |
Ganusov VV, Antia R. Trade-offs and the evolution of virulence of microparasites: do details matter? Theoretical Population Biology. 64: 211-20. PMID 12948682 DOI: 10.1016/S0040-5809(03)00063-7 |
0.589 |
|
| 2002 |
Ganusov VV, Brilkov AV. Estimating the instability parameters of plasmid-bearing cells. I. Chemostat culture. Journal of Theoretical Biology. 219: 193-205. PMID 12413875 DOI: 10.1006/Jtbi.2002.3101 |
0.307 |
|
| 2002 |
Ganusov VV, Bergstrom CT, Antia R. Within-host population dynamics and the evolution of microparasites in a heterogeneous host population. Evolution; International Journal of Organic Evolution. 56: 213-23. PMID 11926490 DOI: 10.1111/J.0014-3820.2002.Tb01332.X |
0.589 |
|
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