Jean Shin - Related publications

Affiliations: 
2016- Rotman Research Institute, Toronto, Ontario, Canada 
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 van der Meer D, Frei O, Kaufmann T, Shadrin AA, Devor A, Smeland OB, Thompson WK, Fan CC, Holland D, Westlye LT, Andreassen OA, Dale AM. Understanding the genetic determinants of the brain with MOSTest. Nature Communications. 11: 3512. PMID 32665545 DOI: 10.1038/s41467-020-17368-1   
2020 Seidlitz J, Nadig A, Liu S, Bethlehem RAI, Vértes PE, Morgan SE, Váša F, Romero-Garcia R, Lalonde FM, Clasen LS, Blumenthal JD, Paquola C, Bernhardt B, Wagstyl K, Polioudakis D, et al. Transcriptomic and cellular decoding of regional brain vulnerability to neurogenetic disorders. Nature Communications. 11: 3358. PMID 32620757 DOI: 10.1038/s41467-020-17051-5   
2020 Fears SC, Service SK, Kremeyer B, Araya C, Araya X, Bejarano J, Ramirez M, Castrillón G, Gomez-Franco J, Lopez MC, Montoya G, Montoya P, Aldana I, Teshiba TM, Al-Sharif NB, et al. Genome-wide mapping of brain phenotypes in extended pedigrees with strong genetic loading for bipolar disorder. Molecular Psychiatry. PMID 32606377 DOI: 10.1038/s41380-020-0805-6   
2020 Lopera Maya EA, van der Graaf A, Lanting P, van der Geest M, Fu J, Swertz M, Franke L, Wijmenga C, Deelen P, Zhernakova A, Sanna S, . Lack of Association Between Genetic Variants at and Genes Involved in SARS-CoV-2 Infection and Human Quantitative Phenotypes. Frontiers in Genetics. 11: 613. PMID 32582302 DOI: 10.3389/fgene.2020.00613   
2020 Sullivan KM, Susztak K. Unravelling the complex genetics of common kidney diseases: from variants to mechanisms. Nature Reviews. Nephrology. PMID 32514149 DOI: 10.1038/s41581-020-0298-1   
2020 Zhang S, Zhang H, Zhou Y, Qiao M, Zhao S, Kozlova A, Shi J, Sanders AR, Wang G, Luo K, Sengupta S, West S, Qian S, Streit M, Avramopoulos D, et al. Allele-specific open chromatin in human iPSC neurons elucidates functional disease variants. Science (New York, N.Y.). 369: 561-565. PMID 32732423 DOI: 10.1126/science.aay3983   
2020 Yassine HN, Finch CE. Alleles and Diet in Brain Aging and Alzheimer's Disease. Frontiers in Aging Neuroscience. 12: 150. PMID 32587511 DOI: 10.3389/fnagi.2020.00150   
2020 Zhao Z, Zhang L, Kang X, Zheng J, Tian B. Association Between Genetic Polymorphisms of Gene and the Risk of Steroid-Induced Osteonecrosis of the Femoral Head in the Chinese Han Male Population. Genetic Testing and Molecular Biomarkers. PMID 32552036 DOI: 10.1089/gtmb.2020.0048   
2020 Comer AL, Sriram B, Yen WW, Cruz-Martín A. A Pipeline using Bilateral In Utero Electroporation to Interrogate Genetic Influences on Rodent Behavior. Journal of Visualized Experiments : Jove. PMID 32510510 DOI: 10.3791/61350   
2020 Fan KH, Feingold E, Rosenthal SL, Demirci FY, Ganguli M, Lopez OL, Kamboh MI. Whole-Exome Sequencing Analysis of Alzheimer's Disease in Non-APOE*4 Carriers. Journal of Alzheimer's Disease : Jad. PMID 32651314 DOI: 10.3233/JAD-200037   
2020 Lin CW, Chang LC, Ma T, Oh H, French B, Puralewski R, Mathews F, Fang Y, Lewis DA, Kennedy JL, Mueller D, Marshe VS, Jaffe A, Chen Q, Ursini G, et al. Older molecular brain age in severe mental illness. Molecular Psychiatry. PMID 32632206 DOI: 10.1038/s41380-020-0834-1   
2020 Hughes DA, Bacigalupe R, Wang J, Rühlemann MC, Tito RY, Falony G, Joossens M, Vieira-Silva S, Henckaerts L, Rymenans L, Verspecht C, Ring S, Franke A, Wade KH, Timpson NJ, et al. Genome-wide associations of human gut microbiome variation and implications for causal inference analyses. Nature Microbiology. PMID 32572223 DOI: 10.1038/s41564-020-0743-8   
2020 Kim HI, Ye B, Gosalia N, , Köroğlu Ç, Hanson RL, Hsueh WC, Knowler WC, Baier LJ, Bogardus C, Shuldiner AR, Van Hout CV. Characterization of Exome Variants and Their Metabolic Impact in 6,716 American Indians from the Southwest US. American Journal of Human Genetics. PMID 32640185 DOI: 10.1016/j.ajhg.2020.06.009   
2020 Pan Y, Tian R, Lee C, Bao G, Gibson G. Fine-mapping within eQTL credible intervals by expression CROP-seq. Biology Methods & Protocols. 5: bpaa008. PMID 32665975 DOI: 10.1093/biomethods/bpaa008   
2020 Cano-Gamez E, Trynka G. From GWAS to Function: Using Functional Genomics to Identify the Mechanisms Underlying Complex Diseases. Frontiers in Genetics. 11: 424. PMID 32477401 DOI: 10.3389/fgene.2020.00424   
2020 Lee HC, Ichikawa O, Glicksberg BS, Divaraniya AA, Becker CE, Agarwal P, Dudley JT. Identification of therapeutic targets from genetic association studies using hierarchical component analysis. Biodata Mining. 13: 6. PMID 32565911 DOI: 10.1186/s13040-020-00216-9   
2020 González JR, Ruiz-Arenas C, Cáceres A, Morán I, López-Sánchez M, Alonso L, Tolosana I, Guindo-Martínez M, Mercader JM, Esko T, Torrents D, González J, Pérez-Jurado LA. Polymorphic Inversions Underlie the Shared Genetic Susceptibility of Obesity-Related Diseases. American Journal of Human Genetics. 106: 846-858. PMID 32470372 DOI: 10.1016/j.ajhg.2020.04.017   
2020 Lou S, Ma L, Kan S, Yu X, Wang Y, Yang F, Zhu G, Fan L, Li D, Wang H, Wang W, Zhang W, Wang L, Pan Y. Association Study of Genetic Variants in Autophagy Pathway and Risk of Non-syndromic Cleft Lip With or Without Cleft Palate. Frontiers in Cell and Developmental Biology. 8: 576. PMID 32766242 DOI: 10.3389/fcell.2020.00576   
2020 Ni J, Deng B, Zhu M, Wang Y, Yan C, Wang T, Liu Y, Li G, Ding Y, Jin G. Integration of GWAS and eQTL Analysis to Identify Risk Loci and Susceptibility Genes for Gastric Cancer. Frontiers in Genetics. 11: 679. PMID 32754194 DOI: 10.3389/fgene.2020.00679   
2020 Aslam ML, Robledo D, Krasnov A, Moghadam HK, Hillestad B, Houston RD, Baranski M, Boison S, Robinson NA. Quantitative trait loci and genes associated with salmonid alphavirus load in Atlantic salmon: implications for pancreas disease resistance and tolerance. Scientific Reports. 10: 10393. PMID 32587341 DOI: 10.1038/s41598-020-67405-8   
2020 Li X, Shi W, Zhang R, Zhang S, Hou W, Wu Y, Lu R, Feng Y, Tian J, Sun L. Integrate Molecular Phenome and Polygenic Interaction to Detect the Genetic Risk of Ischemic Stroke. Frontiers in Cell and Developmental Biology. 8: 453. PMID 32671063 DOI: 10.3389/fcell.2020.00453   
2020 Ferreira MAR, Vonk JM, Baurecht H, Marenholz I, Tian C, Hoffman JD, Helmer Q, Tillander A, Ullemar V, Lu Y, Grosche S, Rüschendorf F, Granell R, Brumpton BM, Fritsche LG, ... , ... , et al. Age-of-onset information helps identify 76 genetic variants associated with allergic disease. Plos Genetics. 16: e1008725. PMID 32603359 DOI: 10.1371/journal.pgen.1008725   
2020 Yurko R, G'Sell M, Roeder K, Devlin B. A selective inference approach for false discovery rate control using multiomics covariates yields insights into disease risk. Proceedings of the National Academy of Sciences of the United States of America. PMID 32522875 DOI: 10.1073/pnas.1918862117   
2020 Wu J, Yu R, Wang H, Zhou C, Huang S, Jiao H, Yu S, Nie X, Wang Q, Liu S, Weining S, Singh RP, Bhavani S, Kang Z, Han D, et al. A large-scale genomic association analysis identifies the candidate causal genes conferring stripe rust resistance under multiple field environments. Plant Biotechnology Journal. PMID 32677132 DOI: 10.1111/pbi.13452   
2020 Gresle MM, Jordan MA, Stankovich J, Spelman T, Johnson LJ, Laverick L, Hamlett A, Smith LD, Jokubaitis VG, Baker J, Haartsen J, Taylor B, Charlesworth J, Bahlo M, Speed TP, et al. Multiple sclerosis risk variants regulate gene expression in innate and adaptive immune cells. Life Science Alliance. 3. PMID 32518073 DOI: 10.26508/lsa.202000650   
2020 Han J, Chen C, Wang C, Qin N, Huang M, Ma Z, Zhu M, Dai J, Jiang Y, Ma H, Jin G, Shen H, Hu Z. Transcriptome wide association study for persistent hepatitis B virus infection and related hepatocellular carcinoma. Liver International : Official Journal of the International Association For the Study of the Liver. PMID 32574393 DOI: 10.1111/liv.14577   
2020 Lin J, Susztak K. Complexities of Understanding Function from CKD-Associated DNA Variants. Clinical Journal of the American Society of Nephrology : Cjasn. PMID 32513823 DOI: 10.2215/CJN.15771219   
2020 Gnanadesikan GE, Hare B, Snyder-Mackler N, Call J, Kaminski J, Miklósi Á, MacLean EL. Breed differences in dog cognition associated with brain-expressed genes and neurological functions. Integrative and Comparative Biology. PMID 32726413 DOI: 10.1093/icb/icaa112   
2020 Rathod A, Duan J, Zhang H, Holloway JW, Ewart S, Arshad SH, Karmaus W. Interweaving Between Genetic and Epigenetic Studies on Childhood Asthma. Epigenetics Insights. 13: 2516865720923395. PMID 32754683 DOI: 10.1177/2516865720923395   
2020 Cheema AN, Pirim D, Wang X, Ali J, Bhatti A, John P, Feingold E, Demirci FY, Kamboh MI. Association Study of Coronary Artery Disease-Associated Genome-Wide Significant SNPs with Coronary Stenosis in Pakistani Population. Disease Markers. 2020: 9738567. PMID 32685059 DOI: 10.1155/2020/9738567   
2020 Höglund A, Strempfl K, Fogelholm J, Wright D, Henriksen R. The genetic regulation of size variation in the transcriptome of the cerebrum in the chicken and its role in domestication and brain size evolution. Bmc Genomics. 21: 518. PMID 32727510 DOI: 10.1186/s12864-020-06908-0   
2020 Xie L, Varathan P, Nho K, Saykin AJ, Salama P, Yan J. Identification of functionally connected multi-omic biomarkers for Alzheimer's disease using modularity-constrained Lasso. Plos One. 15: e0234748. PMID 32555747 DOI: 10.1371/journal.pone.0234748   
2020 Bani-Fatemi A, Adanty C, Dai N, Dada O, Strauss J, Zai C, Gerretsen P, Graff A, De Luca V. Genome-wide methylation association with current suicidal ideation in schizophrenia. Journal of Neural Transmission (Vienna, Austria : 1996). PMID 32661777 DOI: 10.1007/s00702-020-02225-8   
2020 Dou J, Wu D, Ding L, Wang K, Jiang M, Chai X, Reilly DF, Tai ES, Liu J, Sim X, Cheng S, Wang C. Using off-target data from whole-exome sequencing to improve genotyping accuracy, association analysis and polygenic risk prediction. Briefings in Bioinformatics. PMID 32591784 DOI: 10.1093/bib/bbaa084   
2020 Jin X, Wang Y, Zhang X, Zhang W, Wang H, Chen C. Gene mapping and functional annotation of GWAS of oral ulcers using FUMA software. Scientific Reports. 10: 12205. PMID 32699208 DOI: 10.1038/s41598-020-68976-2   
2020 Weiss M, Sniezko RA, Puiu D, Crepeau MW, Stevens K, Salzberg SL, Langley CH, Neale DB, De La Torre AR. Genomic basis of white pine blister rust quantitative disease resistance and its relationship with qualitative resistance. The Plant Journal : For Cell and Molecular Biology. PMID 32654344 DOI: 10.1111/tpj.14928   
2020 Varma M, Kadoki M, Lefkovith A, Conway KL, Gao K, Mohanan V, Tusi BK, Graham DB, Latorre IJ, Tolonen AC, Khor B, Ng A, Xavier RJ. Cell Type- and Stimulation-Dependent Transcriptional Programs Regulated by Atg16L1 and Its Crohn's Disease Risk Variant T300A. Journal of Immunology (Baltimore, Md. : 1950). PMID 32522834 DOI: 10.4049/jimmunol.1900750   
2020 Zhang F, Wang YF, Zhang Y, Lin Z, Cao Y, Zhang H, Liu ZY, Morris DL, Sheng Y, Cui Y, Zhang X, Vyse TJ, Lau YL, Yang W, Chen Y. Independent Replication on Genome-Wide Association Study Signals Identifies as a Novel Locus for Systemic Lupus Erythematosus. Frontiers in Genetics. 11: 600. PMID 32719713 DOI: 10.3389/fgene.2020.00600   
2020 Lee K, Moon S, Park MJ, Koh IU, Choi NH, Yu HY, Kim YJ, Kong J, Kang HG, Kim SC, Kim BJ. Integrated Analysis of Tissue-Specific Promoter Methylation and Gene Expression Profile in Complex Diseases. International Journal of Molecular Sciences. 21. PMID 32709145 DOI: 10.3390/ijms21145056   
2020 Zhou YL, Wu WP, Cheng J, Liang LL, Cen JM, Chen C, Liu X, Xiong XD. rs12196996, a polymorphism at the gene flanking intron, is associated with circFOXO3 levels and the risk of coronary artery disease. Aging. 12. PMID 32614786 DOI: 10.18632/aging.103398   
2020 Wang Q, Yu Y, Zhang Q, Luo Z, Zhang X, Xiang J, Li F. The Polymorphism of LvMMD2 and Its Association with Growth Traits in Litopenaeus vannamei. Marine Biotechnology (New York, N.Y.). PMID 32578061 DOI: 10.1007/s10126-020-09977-0   
2020 Cheng W, Ramachandran S, Crawford L. Estimation of non-null SNP effect size distributions enables the detection of enriched genes underlying complex traits. Plos Genetics. 16: e1008855. PMID 32542026 DOI: 10.1371/journal.pgen.1008855   
2020 Hibberd R, Golovina E, Farrow S, O'Sullivan JM. Genetic variants associated with alcohol dependence co-ordinate regulation of ADH genes in gastrointestinal and adipose tissues. Scientific Reports. 10: 9897. PMID 32555468 DOI: 10.1038/s41598-020-66048-z   
2020 Neuner SM, Tcw J, Goate AM. Genetic architecture of Alzheimer's disease. Neurobiology of Disease. 104976. PMID 32565066 DOI: 10.1016/j.nbd.2020.104976   
2020 Berto S, Liu Y, Konopka G. Genomics at cellular resolution: insights into cognitive disorders and their evolution. Human Molecular Genetics. PMID 32566943 DOI: 10.1093/hmg/ddaa117   
2020 Guinot F, Szafranski M, Chiquet J, Zancarini A, Le Signor C, Mougel C, Ambroise C. Fast computation of genome-metagenome interaction effects. Algorithms For Molecular Biology : Amb. 15: 13. PMID 32625242 DOI: 10.1186/s13015-020-00173-2   
2020 Yong SY, Raben TG, Lello L, Hsu SDH. Genetic architecture of complex traits and disease risk predictors. Scientific Reports. 10: 12055. PMID 32694572 DOI: 10.1038/s41598-020-68881-8   
2020 Sim JJ, Chan FM, Chen S, Meng Tan BH, Mi Aung KM. Achieving GWAS with homomorphic encryption. Bmc Medical Genomics. 13: 90. PMID 32693823 DOI: 10.1186/s12920-020-0717-y   
2020 Li C, Wang L, Li Y, Feng Z, Wang Q, Luo W. Common Variants in Gene Contributed to the Risk of Dilated Cardiomyopathy in the Han Chinese Population. Genetic Testing and Molecular Biomarkers. PMID 32721242 DOI: 10.1089/gtmb.2020.0080   
2020 Zhang F, Zeng J, Li WW, Han YK, Zhang P, Wang XS, Gu JP, Gu RJ. [The association study of gene polymorphisms with delayed encephalopathy after acute carbon monoxide poisoning]. Zhonghua Lao Dong Wei Sheng Zhi Ye Bing Za Zhi = Zhonghua Laodong Weisheng Zhiyebing Zazhi = Chinese Journal of Industrial Hygiene and Occupational Diseases. 38: 485-489. PMID 32746566 DOI: 10.3760/cma.j.cn121094-20190627-00262