Rafael Tapia-Rojo - Publications

Affiliations: 
2016- Department of Biological Sc Columbia University, New York, NY 

22 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Tapia-Rojo R, Mora M, Board S, Walker J, Boujemaa-Paterski R, Medalia O, Garcia-Manyes S. Enhanced statistical sampling reveals microscopic complexity in the talin mechanosensor folding energy landscape. Nature Physics. 19: 52-60. PMID 36660164 DOI: 10.1038/s41567-022-01808-4  0.589
2020 Alonso-Caballero A, Echelman DJ, Tapia-Rojo R, Haldar S, Eckels EC, Fernandez JM. Protein folding modulates the chemical reactivity of a Gram-positive adhesin. Nature Chemistry. PMID 33257887 DOI: 10.1038/s41557-020-00586-x  0.742
2020 Tapia-Rojo R, Alonso-Caballero Á, Fernández JM. Talin folding as the tuning fork of cellular mechanotransduction. Proceedings of the National Academy of Sciences of the United States of America. PMID 32817549 DOI: 10.1073/Pnas.2004091117  0.829
2020 Tapia-Rojo R, Alonso-Caballero A, Fernandez JM. Direct observation of a coil-to-helix contraction triggered by vinculin binding to talin. Science Advances. 6: eaaz4707. PMID 32494739 DOI: 10.1126/Sciadv.Aaz4707  0.806
2020 Rivas-Pardo JA, Li Y, Mártonfalvi Z, Tapia-Rojo R, Unger A, Fernández-Trasancos Á, Herrero-Galán E, Velázquez-Carreras D, Fernández JM, Linke WA, Alegre-Cebollada J. A HaloTag-TEV genetic cassette for mechanical phenotyping of proteins from tissues. Nature Communications. 11: 2060. PMID 32345978 DOI: 10.1038/S41467-020-15465-9  0.832
2020 Alonso-Caballero A, Tapia-Rojo R, Badilla CL, Fernandez JM. High Force Magnetic Tweezers Reveal That Bacterial Adhesion Pili Act as Megadalton-scale Schock Absorbers Biophysical Journal. 118: 33a-34a. DOI: 10.1016/J.Bpj.2019.11.361  0.798
2019 Tapia-Rojo R, Mazo JJ, Falo F. Thermal versus mechanical unfolding in a model protein. The Journal of Chemical Physics. 151: 185105. PMID 31731855 DOI: 10.1063/1.5126071  0.615
2019 Eckels EC, Haldar S, Tapia-Rojo R, Rivas-Pardo JA, Fernández JM. The Mechanical Power of Titin Folding. Cell Reports. 27: 1836-1847.e4. PMID 31067467 DOI: 10.1016/J.Celrep.2019.04.046  0.805
2019 Tapia-Rojo R, Eckels EC, Fernández JM. Ephemeral states in protein folding under force captured with a magnetic tweezers design. Proceedings of the National Academy of Sciences of the United States of America. PMID 30936303 DOI: 10.1073/Pnas.1821284116  0.823
2019 Rivas-Pardo JA, Li Y, Mártonfalvi Z, Tapia-Rojo R, Unger A, Fernández-Trasancos Á, Herrero-Galán E, Velázquez-Carreras D, Linke WA, Fernández JM, Alegre-Cebollada J. Abstract 330: A HaloTag-TEV Genetic Cassette for Mechanically Probing Native Titin Circulation Research. 125. DOI: 10.1161/Res.125.Suppl_1.330  0.638
2019 Echelman DJ, Alonso A, Haldar S, Tapia-Rojo R, Eckels EC, Fernandez JM. Mechanical Forces are a Reactivity Switch for an Adhesin Thioester Bond Biophysical Journal. 116: 544a. DOI: 10.1016/J.Bpj.2018.11.2927  0.798
2018 Rivas-Pardo JA, Badilla CL, Tapia-Rojo R, Alonso-Caballero Á, Fernández JM. Molecular strategy for blocking isopeptide bond formation in nascent pilin proteins. Proceedings of the National Academy of Sciences of the United States of America. PMID 30150415 DOI: 10.1073/Pnas.1807689115  0.816
2018 Eckels EC, Tapia-Rojo R, Rivas-Pardo JA, Fernández JM. The Work of Titin Protein Folding as a Major Driver in Muscle Contraction. Annual Review of Physiology. 80: 327-351. PMID 29433413 DOI: 10.1146/Annurev-Physiol-021317-121254  0.821
2018 Tapia-Rojo R, Andres RIvas-Pardo J, Fernandez JM. An Electromagnetic Tweezers for Studying Fast Protein Folding Dynamics Biophysical Journal. 114: 385a. DOI: 10.1016/J.Bpj.2017.11.2129  0.413
2017 Haldar S, Tapia-Rojo R, Eckels EC, Valle-Orero J, Fernandez JM. Trigger factor chaperone acts as a mechanical foldase. Nature Communications. 8: 668. PMID 28939815 DOI: 10.1038/S41467-017-00771-6  0.795
2017 Valle-Orero J, Tapia-Rojo R, Eckels EC, Rivas-Pardo JA, Popa I, Fernandez JM. Proteins Breaking Bad: A Free Energy Perspective. The Journal of Physical Chemistry Letters. PMID 28723106 DOI: 10.1021/Acs.Jpclett.7B01509  0.772
2017 Valle Orero J, Rivas-Pardo JA, Tapia-Rojo R, Popa I, Echelman DJ, Haldar S, Fernandez JM. Mechanical deformation accelerates protein ageing. Angewandte Chemie (International Ed. in English). PMID 28470663 DOI: 10.1002/Anie.201703630  0.764
2017 Tapia-Rojo R, Marcuello C, Lostao A, Gómez-Moreno C, J Mazo J, Falo F. A physical picture for mechanical dissociation of biological complexes: from forces to free energies. Physical Chemistry Chemical Physics : Pccp. 19: 4567-4575. PMID 28124058 DOI: 10.1039/C6Cp07508H  0.473
2017 Valle Orero J, Rivas-Pardo JA, Tapia-Rojo R, Popa I, Echelman DJ, Fernandez JM. Protein Aging: Loss of Folding Contraction due to Oxidation of Cryptic Side Chains Biophysical Journal. 112: 490a. DOI: 10.1016/J.Bpj.2016.11.2651  0.759
2017 Haldar S, Tapia-Rojo R, Fernandez JM. Trigger Factor Boosts the Work Done by Protein Folding under Force Biophysical Journal. 112: 41a. DOI: 10.1016/J.Bpj.2016.11.261  0.835
2014 Tapia-Rojo R, Arregui S, Mazo JJ, Falo F. Mechanical unfolding of a simple model protein goes beyond the reach of one-dimensional descriptions. Journal of Chemical Physics. 141: 135102. PMID 25296840 DOI: 10.1063/1.4896620  0.359
2014 Tapia-Rojo R, Mazo JJ, Hernández JÁ, Peleato ML, Fillat MF, Falo F. Mesoscopic model and free energy landscape for protein-DNA binding sites: analysis of cyanobacterial promoters. Plos Computational Biology. 10: e1003835. PMID 25275384 DOI: 10.1371/Journal.Pcbi.1003835  0.338
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