Christopher A. Bottoms, Ph.D. - Publications

Affiliations: 
2005 University of Missouri - Columbia, Columbia, MO, United States 
Area:
Biochemistry, Bioinformatics Biology, Molecular Biology

9/18 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2008 Bottoms CA, Xu D. Wanted: unique names for unique atom positions. PDB-wide analysis of diastereotopic atom names of small molecules containing diphosphate. Bmc Bioinformatics. 9: S16. PMID 18793461 DOI: 10.1186/1471-2105-9-S9-S16  0.337
2008 Zhou Y, Larson JD, Bottoms CA, Arturo EC, Henzl MT, Jenkins JL, Nix JC, Becker DF, Tanner JJ. Structural basis of the transcriptional regulation of the proline utilization regulon by multifunctional PutA. Journal of Molecular Biology. 381: 174-88. PMID 18586269 DOI: 10.1016/J.Jmb.2008.05.084  0.661
2007 Ou Z, Bottoms CA, Henzl MT, Tanner JJ. Impact of DNA hairpin folding energetics on antibody-ssDNA association. Journal of Molecular Biology. 374: 1029-40. PMID 18028946 DOI: 10.1016/J.Jmb.2007.09.084  0.57
2006 Bottoms CA, White TA, Tanner JJ. Exploring structurally conserved solvent sites in protein families. Proteins. 64: 404-21. PMID 16700049 DOI: 10.1002/Prot.21014  0.647
2006 Pattarkine MV, Tanner JJ, Bottoms CA, Lee YH, Wall JD. Desulfovibrio desulfuricans G20 tetraheme cytochrome structure at 1.5 Angstrom and cytochrome interaction with metal complexes. Journal of Molecular Biology. 358: 1314-27. PMID 16580681 DOI: 10.1016/J.Jmb.2006.03.010  0.613
2005 Beamer LJ, Li X, Bottoms CA, Hannink M. Conserved solvent and side-chain interactions in the 1.35 Angstrom structure of the Kelch domain of Keap1. Acta Crystallographica. Section D, Biological Crystallography. 61: 1335-42. PMID 16204884 DOI: 10.1107/S0907444905022626  0.452
2004 Bottoms CA, Schuermann JP, Agah S, Henzl MT, Tanner JJ. Crystal structure of rat alpha-parvalbumin at 1.05 Angstrom resolution. Protein Science : a Publication of the Protein Society. 13: 1724-34. PMID 15169955 DOI: 10.1110/Ps.03571004  0.664
2004 Bottoms CA, Schuermann JP, Agah S, Henzl MT, Tanner JJ. Crystal Structure of Rat Alpha-Parvalbumin at 1.05 Resolution Protein Science. 13: 1724-1734. DOI: 10.2210/Pdb1Rwy/Pdb  0.639
2002 Bottoms CA, Smith PE, Tanner JJ. A structurally conserved water molecule in Rossmann dinucleotide-binding domains. Protein Science : a Publication of the Protein Society. 11: 2125-37. PMID 12192068 DOI: 10.1110/Ps.0213502  0.606
Low-probability matches (unlikely to be authored by this person)
2013 Ditzler MA, Lange MJ, Bose D, Bottoms CA, Virkler KF, Sawyer AW, Whatley AS, Spollen W, Givan SA, Burke DH. High-throughput sequence analysis reveals structural diversity and improved potency among RNA inhibitors of HIV reverse transcriptase. Nucleic Acids Research. 41: 1873-84. PMID 23241386 DOI: 10.1093/Nar/Gks1190  0.292
2012 Givan SA, Bottoms CA, Spollen WG. Computational analysis of RNA-seq. Methods in Molecular Biology (Clifton, N.J.). 883: 201-19. PMID 22589136 DOI: 10.1007/978-1-61779-839-9_16  0.255
2009 McMullen MD, Kresovich S, Villeda HS, Bradbury P, Li H, Sun Q, Flint-Garcia S, Thornsberry J, Acharya C, Bottoms C, Brown P, Browne C, Eller M, Guill K, Harjes C, et al. Genetic properties of the maize nested association mapping population. Science (New York, N.Y.). 325: 737-40. PMID 19661427 DOI: 10.1126/Science.1174320  0.255
2020 Mabry ME, Brose JM, Blischak PD, Sutherland B, Dismukes WT, Bottoms CA, Edger PP, Washburn JD, An H, Hall JC, McKain MR, Al-Shehbaz I, Barker MS, Schranz ME, Conant GC, et al. Phylogeny and multiple independent whole-genome duplication events in the Brassicales. American Journal of Botany. PMID 32830865 DOI: 10.1002/Ajb2.1514  0.238
2010 Bottoms CA, Flint-Garcia S, McMullen MD. IView: introgression library visualization and query tool. Bmc Bioinformatics. 11: S28. PMID 20946612 DOI: 10.1186/1471-2105-11-S6-S28  0.231
2016 Liu Z, Cook J, Melia-Hancock S, Guill K, Bottoms C, Garcia A, Ott O, Nelson R, Recker J, Balint-Kurti P, Larsson S, Lepak N, Buckler E, Trimble L, Tracy W, et al. Expanding Maize Genetic Resources with Predomestication Alleles: Maize-Teosinte Introgression Populations. The Plant Genome. 9. PMID 27898757 DOI: 10.3835/Plantgenome2015.07.0053  0.208
2018 Liu Z, Bottoms C, Flint-Garcia S, McMullen M. Genome-wide appraisal of loss-of-function variants in Zea mays F1000research. 7. DOI: 10.7490/F1000Research.1115274.1  0.201
2020 Khalyfa A, Warren W, Andrade J, Bottoms CA, Rice ES, Cortese R, Kheirandish-Gozal L, Gozal D. Transcriptomic Changes of Murine Visceral Fat Exposed to Intermittent Hypoxia at Single Cell Resolution. International Journal of Molecular Sciences. 22. PMID 33383883 DOI: 10.3390/ijms22010261  0.073
2022 Lyu Z, Singh P, Bottoms C, Sinn M, Featherston J, Cleavinger K, Bos J, Markham M, Koffarnus N, Turabelidze G, Joshi T. Empowering SARS-CoV-2 Genomics Surveillance in Missouri with Data Analytics and Integration Portals. Missouri Medicine. 119: 185-187. PMID 36035558  0.051
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