Amit Zeisel - Publications

Karolinska Institute, Stockholm, Sweden 

27 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Tibi M, Biton Hayun S, Hochgerner H, Lin Z, Givon S, Ophir O, Shay T, Mueller T, Segev R, Zeisel A. A telencephalon cell type atlas for goldfish reveals diversity in the evolution of spatial structure and cell types. Science Advances. 9: eadh7693. PMID 37910612 DOI: 10.1126/sciadv.adh7693  0.456
2023 Hochgerner H, Singh S, Tibi M, Lin Z, Skarbianskis N, Admati I, Ophir O, Reinhardt N, Netser S, Wagner S, Zeisel A. Neuronal types in the mouse amygdala and their transcriptional response to fear conditioning. Nature Neuroscience. PMID 37884748 DOI: 10.1038/s41593-023-01469-3  0.341
2018 Codeluppi S, Borm LE, Zeisel A, La Manno G, van Lunteren JA, Svensson CI, Linnarsson S. Spatial organization of the somatosensory cortex revealed by osmFISH. Nature Methods. 15: 932-935. PMID 30377364 DOI: 10.1038/S41592-018-0175-Z  0.773
2018 Muñoz-Manchado AB, Bengtsson Gonzales C, Zeisel A, Munguba H, Bekkouche B, Skene NG, Lönnerberg P, Ryge J, Harris KD, Linnarsson S, Hjerling-Leffler J. Diversity of Interneurons in the Dorsal Striatum Revealed by Single-Cell RNA Sequencing and PatchSeq. Cell Reports. 24: 2179-2190.e7. PMID 30134177 DOI: 10.1016/J.Celrep.2018.07.053  0.718
2018 Zeisel A, Hochgerner H, Lönnerberg P, Johnsson A, Memic F, van der Zwan J, Häring M, Braun E, Borm LE, La Manno G, Codeluppi S, Furlan A, Lee K, Skene N, Harris KD, et al. Molecular Architecture of the Mouse Nervous System. Cell. 174: 999-1014.e22. PMID 30096314 DOI: 10.1016/J.Cell.2018.06.021  0.788
2018 La Manno G, Soldatov R, Zeisel A, Braun E, Hochgerner H, Petukhov V, Lidschreiber K, Kastriti ME, Lönnerberg P, Furlan A, Fan J, Borm LE, Liu Z, van Bruggen D, Guo J, et al. RNA velocity of single cells. Nature. PMID 30089906 DOI: 10.1038/S41586-018-0414-6  0.786
2018 Häring M, Zeisel A, Hochgerner H, Rinwa P, Jakobsson JET, Lönnerberg P, La Manno G, Sharma N, Borgius L, Kiehn O, Lagerström MC, Linnarsson S, Ernfors P. Neuronal atlas of the dorsal horn defines its architecture and links sensory input to transcriptional cell types. Nature Neuroscience. PMID 29686262 DOI: 10.1038/S41593-018-0141-1  0.758
2018 Fuks G, Elgart M, Amir A, Zeisel A, Turnbaugh PJ, Soen Y, Shental N. Combining 16S rRNA gene variable regions enables high-resolution microbial community profiling. Microbiome. 6: 17. PMID 29373999 DOI: 10.1186/S40168-017-0396-X  0.308
2018 Hochgerner H, Zeisel A, Lönnerberg P, Linnarsson S. Conserved properties of dentate gyrus neurogenesis across postnatal development revealed by single-cell RNA sequencing. Nature Neuroscience. PMID 29335606 DOI: 10.1038/S41593-017-0056-2  0.705
2017 Hochgerner H, Lönnerberg P, Hodge R, Mikes J, Heskol A, Hubschle H, Lin P, Picelli S, La Manno G, Ratz M, Dunne J, Husain S, Lein E, Srinivasan M, Zeisel A, et al. STRT-seq-2i: dual-index 5' single cell and nucleus RNA-seq on an addressable microwell array. Scientific Reports. 7: 16327. PMID 29180631 DOI: 10.1038/S41598-017-16546-4  0.786
2017 Morarach K, Memic F, Zeisel A, Hochgerner H, Marklund U, Linnarsson S. Single-cell molecular interrogation of enteric nervous system development Mechanisms of Development. 145: S67. DOI: 10.1016/J.Mod.2017.04.151  0.673
2016 Romanov RA, Zeisel A, Bakker J, Girach F, Hellysaz A, Tomer R, Alpár A, Mulder J, Clotman F, Keimpema E, Hsueh B, Crow AK, Martens H, Schwindling C, Calvigioni D, et al. Molecular interrogation of hypothalamic organization reveals distinct dopamine neuronal subtypes. Nature Neuroscience. PMID 27991900 DOI: 10.1038/Nn.4462  0.646
2016 La Manno G, Gyllborg D, Codeluppi S, Nishimura K, Salto C, Zeisel A, Borm LE, Stott SR, Toledo EM, Villaescusa JC, Lönnerberg P, Ryge J, Barker RA, Arenas E, Linnarsson S. Molecular Diversity of Midbrain Development in Mouse, Human, and Stem Cells. Cell. 167: 566-580.e19. PMID 27716510 DOI: 10.1016/J.Cell.2016.09.027  0.799
2016 Joost S, Zeisel A, Jacob T, Sun X, La Manno G, Lönnerberg P, Linnarsson S, Kasper M. Single-Cell Transcriptomics Reveals that Differentiation and Spatial Signatures Shape Epidermal and Hair Follicle Heterogeneity. Cell Systems. PMID 27641957 DOI: 10.1016/J.Cels.2016.08.010  0.788
2016 Marques S, Zeisel A, Codeluppi S, van Bruggen D, Mendanha Falcão A, Xiao L, Li H, Häring M, Hochgerner H, Romanov RA, Gyllborg D, Muñoz-Manchado AB, La Manno G, Lönnerberg P, Floriddia EM, et al. Oligodendrocyte heterogeneity in the mouse juvenile and adult central nervous system. Science (New York, N.Y.). 352: 1326-9. PMID 27284195 DOI: 10.1126/Science.Aaf6463  0.75
2015 Fuzik J, Zeisel A, Máté Z, Calvigioni D, Yanagawa Y, Szabó G, Linnarsson S, Harkany T. Integration of electrophysiological recordings with single-cell RNA-seq data identifies neuronal subtypes. Nature Biotechnology. PMID 26689544 DOI: 10.1038/Nbt.3443  0.716
2015 Zeisel A, Muñoz-Manchado AB, Codeluppi S, Lönnerberg P, La Manno G, Juréus A, Marques S, Munguba H, He L, Betsholtz C, Rolny C, Castelo-Branco G, Hjerling-Leffler J, Linnarsson S. Brain structure. Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq. Science (New York, N.Y.). 347: 1138-42. PMID 25700174 DOI: 10.1126/Science.Aaa1934  0.805
2015 Cohen-Dvashi H, Ben-Chetrit N, Russell R, Carvalho S, Lauriola M, Nisani S, Mancini M, Nataraj N, Kedmi M, Roth L, Köstler W, Zeisel A, Yitzhaky A, Zylberg J, Tarcic G, et al. Navigator-3, a modulator of cell migration, may act as a suppressor of breast cancer progression. Embo Molecular Medicine. 7: 299-314. PMID 25678558 DOI: 10.15252/Emmm.201404134  0.324
2015 Romanov RA, Alpár A, Zhang MD, Zeisel A, Calas A, Landry M, Fuszard M, Shirran SL, Schnell R, Dobolyi Á, Oláh M, Spence L, Mulder J, Martens H, Palkovits M, et al. A secretagogin locus of the mammalian hypothalamus controls stress hormone release. The Embo Journal. 34: 36-54. PMID 25430741 DOI: 10.15252/Embj.201488977  0.602
2014 Plaks V, Gershon E, Zeisel A, Jacob-Hirsch J, Neeman M, Winterhager E, Rechavi G, Domany E, Dekel N. Blastocyst implantation failure relates to impaired translational machinery gene expression Reproduction. 148: 87-98. PMID 24700326 DOI: 10.1530/Rep-13-0395  0.3
2014 Islam S, Zeisel A, Joost S, La Manno G, Zajac P, Kasper M, Lönnerberg P, Linnarsson S. Quantitative single-cell RNA-seq with unique molecular identifiers. Nature Methods. 11: 163-6. PMID 24363023 DOI: 10.1038/Nmeth.2772  0.772
2013 Köstler WJ, Zeisel A, Körner C, Tsai JM, Jacob-Hirsch J, Ben-Chetrit N, Sharma K, Cohen-Dvashi H, Yitzhaky A, Lader E, Tschulena U, Rechavi G, Domany E, Wiemann S, Yarden Y. Epidermal growth-factor-induced transcript isoform variation drives mammary cell migration. Plos One. 8: e80566. PMID 24324612 DOI: 10.1371/Journal.Pone.0080566  0.395
2013 Zeisel A, Yitzhaky A, Bossel Ben-Moshe N, Domany E. An accessible database for mouse and human whole transcriptome qPCR primers. Bioinformatics (Oxford, England). 29: 1355-6. PMID 23539303 DOI: 10.1093/Bioinformatics/Btt145  0.377
2013 Zeisel A, Yitzhaky A, Koerner C, Lauriola M, Cohen-Dvashi H, Köstler WJ, Yarden Y, Wiemann S, Domany E. qCMA: a desktop application for quantitative collective cell migration analysis. Journal of Biomolecular Screening. 18: 356-60. PMID 23042078 DOI: 10.1177/1087057112461940  0.306
2010 Tirosh-Finkel L, Zeisel A, Brodt-Ivenshitz M, Shamai A, Yao Z, Seger R, Domany E, Tzahor E. BMP-mediated inhibition of FGF signaling promotes cardiomyocyte differentiation of anterior heart field progenitors. Development (Cambridge, England). 137: 2989-3000. PMID 20702560 DOI: 10.1242/Jcs.079764  0.318
2010 Avraham R, Sas-Chen A, Manor O, Steinfeld I, Shalgi R, Tarcic G, Bossel N, Zeisel A, Amit I, Zwang Y, Enerly E, Russnes HG, Biagioni F, Mottolese M, Strano S, et al. EGF decreases the abundance of microRNAs that restrain oncogenic transcription factors. Science Signaling. 3: ra43. PMID 20516477 DOI: 10.1126/Scisignal.2000876  0.338
2009 Chaluvally-Raghavan P, Zeisel A, Koestler W, Jacob-Hirsch J, Rechavi G, Domany E, Yarden Y. HER2-Associated Breast Cancer Signature Using a 3D Culture Model. Cancer Research. 69: 4146-4146. DOI: 10.1158/0008-5472.Sabcs-09-4146  0.344
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