Daniel J. Cooper - Publications

Affiliations: 
2017 Miami Project to Cure Paralysis University of Miami, Coral Gables, FL 

4/59 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Danzi MC, Mehta ST, Dulla K, Zunino G, Cooper DJ, Bixby JL, Lemmon VP. The effect of Jun dimerization on neurite outgrowth and motif binding. Molecular and Cellular Neurosciences. PMID 30077771 DOI: 10.1016/J.Mcn.2018.08.001  0.459
2018 Keenan AB, Jenkins SL, Jagodnik KM, Koplev S, He E, Torre D, Wang Z, Dohlman AB, Silverstein MC, Lachmann A, Kuleshov MV, Ma'ayan A, Stathias V, Terryn R, Cooper D, et al. The Library of Integrated Network-Based Cellular Signatures NIH Program: System-Level Cataloging of Human Cells Response to Perturbations. Cell Systems. 6: 13-24. PMID 29199020 DOI: 10.1016/J.Cels.2017.11.001  0.305
2016 Cooper DJ, Zunino G, Bixby JL, Lemmon VP. Phenotypic screening with primary neurons to identify drug targets for regeneration and degeneration. Molecular and Cellular Neurosciences. PMID 27444126 DOI: 10.1016/J.Mcn.2016.07.001  0.557
2016 Callahan A, Danzi M, Zunino G, Cooper D, Shah N, Visser U, Bixby J, Lemmon V. Elucidating effects of nerve injury on gene expression using RegenBase F1000research. 5. DOI: 10.7490/F1000Research.1112566.1  0.524
Low-probability matches (unlikely to be authored by this person)
2019 Stathias V, Turner J, Koleti A, Vidovic D, Cooper D, Fazel-Najafabadi M, Pilarczyk M, Terryn R, Chung C, Umeano A, Clarke DJB, Lachmann A, Evangelista JE, Ma'ayan A, Medvedovic M, et al. LINCS Data Portal 2.0: next generation access point for perturbation-response signatures. Nucleic Acids Research. PMID 31701147 DOI: 10.1093/Nar/Gkz1023  0.286
2019 Cooper DJ, Schürer S. Improving the Utility of the Tox21 Dataset by Deep Metadata Annotations and Constructing Reusable Benchmarked Chemical Reference Signatures. Molecules (Basel, Switzerland). 24. PMID 31018579 DOI: 10.3390/Molecules24081604  0.285
2017 Koleti A, Terryn R, Stathias V, Chung C, Cooper DJ, Turner JP, Vidovic D, Forlin M, Kelley TT, D'Urso A, Allen BK, Torre D, Jagodnik KM, Wang L, Jenkins SL, et al. Data Portal for the Library of Integrated Network-based Cellular Signatures (LINCS) program: integrated access to diverse large-scale cellular perturbation response data. Nucleic Acids Research. PMID 29140462 DOI: 10.1093/Nar/Gkx1063  0.27
2018 Stathias V, Koleti A, Vidović D, Cooper DJ, Jagodnik KM, Terryn R, Forlin M, Chung C, Torre D, Ayad N, Medvedovic M, Ma'ayan A, Pillai A, Schürer SC. Sustainable data and metadata management at the BD2K-LINCS Data Coordination and Integration Center. Scientific Data. 5: 180117. PMID 29917015 DOI: 10.1038/Sdata.2018.117  0.258
2017 Ong E, Xie J, Ni Z, Liu Q, Sarntivijai S, Lin Y, Cooper D, Terryn R, Stathias V, Chung C, Schürer S, He Y. Ontological representation, integration, and analysis of LINCS cell line cells and their cellular responses. Bmc Bioinformatics. 18: 556. PMID 29322930 DOI: 10.1186/S12859-017-1981-5  0.258
2019 He Y, Duncan WD, Cooper DJ, Hansen J, Iyengar R, Ong E, Walker K, Tibi O, Smith S, Serra LM, Zheng J, Sarntivijai S, Schürer S, O'Shea KS, Diehl AD. OSCI: standardized stem cell ontology representation and use cases for stem cell investigation. Bmc Bioinformatics. 20: 180. PMID 31272389 DOI: 10.1186/S12859-019-2723-7  0.222
2019 Clarke DJB, Wang L, Jones A, Wojciechowicz ML, Torre D, Jagodnik KM, Jenkins SL, McQuilton P, Flamholz Z, Silverstein MC, Schilder BM, Robasky K, Castillo C, Idaszak R, Ahalt SC, ... ... Cooper DJ, et al. FAIRshake: Toolkit to Evaluate the FAIRness of Research Digital Resources. Cell Systems. PMID 31677972 DOI: 10.1016/J.Cels.2019.09.011  0.193
2022 Doyle TLA, Fain AC, Wills JA, Cooper D, Toonen K, Kamphius B. Measures of Lower Body Strength Associated With Injuries in Australian Special Forces Selection Candidates. Journal of Applied Biomechanics. 1-8. PMID 35894978 DOI: 10.1123/jab.2021-0134  0.161
2014 Cooper DJ, Walter CA, McCarrey JR. Co-regulation of pluripotency and genetic integrity at the genomic level. Stem Cell Research. 13: 508-19. PMID 25451711 DOI: 10.1016/J.Scr.2014.09.006  0.153
2018 Cooper DJ, Plewes K, Grigg MJ, Rajahram GS, Piera KA, William T, Chatfield MD, Yeo TW, Dondorp AM, Anstey NM, Barber BE. The effect of regularly dosed paracetamol versus no paracetamol on renal function in Plasmodium knowlesi malaria (PACKNOW): study protocol for a randomised controlled trial. Trials. 19: 250. PMID 29690924 DOI: 10.1186/s13063-018-2600-0  0.102
2018 Barber BE, Grigg MJ, Piera KA, William T, Cooper DJ, Plewes K, Dondorp AM, Yeo TW, Anstey NM. Intravascular haemolysis in severe Plasmodium knowlesi malaria: association with endothelial activation, microvascular dysfunction, and acute kidney injury. Emerging Microbes & Infections. 7: 106. PMID 29872039 DOI: 10.1038/s41426-018-0105-2  0.098
2017 Cooper DJ, Chen IC, Hernandez C, Wang Y, Walter CA, McCarrey JR. Pluripotent cells display enhanced resistance to mutagenesis. Stem Cell Research. 19: 113-117. PMID 28129601 DOI: 10.1016/J.Scr.2016.12.029  0.094
2021 Anstey NM, Grigg MJ, Rajahram GS, Cooper DJ, William T, Kho S, Barber BE. Knowlesi malaria: Human risk factors, clinical spectrum, and pathophysiology. Advances in Parasitology. 113: 1-43. PMID 34620381 DOI: 10.1016/bs.apar.2021.08.001  0.093
2023 Pedersen LN, Valenzuela Ripoll C, Ozcan M, Guo Z, Lotfinaghsh A, Zhang S, Ng S, Weinheimer C, Nigro J, Kovacs A, Diab A, Klaas A, Grogan F, Cho Y, Ataran A, ... ... Cooper D, et al. Cardiac radiation improves ventricular function in mice and humans with cardiomyopathy. Med (New York, N.Y.). PMID 38029754 DOI: 10.1016/j.medj.2023.10.006  0.089
2023 Gruppi C, Sanzenbacher P, Balekjian K, Hagar R, Hagen S, Rayne C, Schweizer TM, Bossu CM, Cooper D, Dietsch T, Smith TB, Ruegg K, Harrigan RJ. Genetic identification of avian samples recovered from solar energy installations. Plos One. 18: e0289949. PMID 37672506 DOI: 10.1371/journal.pone.0289949  0.084
2021 Artinger K, Kirsch AH, Mooslechner AA, Cooper DJ, Aringer I, Schuller M, Schabhüttl C, Klötzer KA, Schweighofer K, Eller P, Yagita H, Illert AL, Rosenkranz AR, Lane PJ, Eller K. Blockade of tumor necrosis factor superfamily members CD30 and OX40 abrogates disease activity in murine immune-mediated glomerulonephritis. Kidney International. PMID 33785369 DOI: 10.1016/j.kint.2021.02.039  0.083
2021 Watson X, D'Souza J, Cooper D, Markham R. Artificial Intelligence in Cardiology: Fundamentals and Applications. Internal Medicine Journal. PMID 34613658 DOI: 10.1111/imj.15562  0.082
2021 Cooper DJ, Plewes K, Grigg MJ, Patel A, Rajahram GS, William T, Hiemstra TF, Wang Z, Barber BE, Anstey NM. An Evaluation of Commonly Used Surrogate Baseline Creatinine Values to Classify AKI During Acute Infection. Kidney International Reports. 6: 645-656. PMID 33732979 DOI: 10.1016/j.ekir.2020.12.020  0.078
2023 Cooper D, Wiggins MW, Main LC, Wills JA, Doyle T. Cue utilisation is partially related to performance on an urban operations course but not experience. Applied Ergonomics. 110: 104024. PMID 37080083 DOI: 10.1016/j.apergo.2023.104024  0.075
2022 Zhan Q, Babler KM, Sharkey ME, Amirali A, Beaver CC, Boone MM, Comerford S, Cooper D, Cortizas EM, Currall BB, Foox J, Grills GS, Kobetz E, Kumar N, Laine J, et al. Relationships between SARS-CoV-2 in Wastewater and COVID-19 Clinical Cases and Hospitalizations, with and without Normalization against Indicators of Human Waste. Acs Es&T Water. 2: 1992-2003. PMID 36398131 DOI: 10.1021/acsestwater.2c00045  0.061
2014 Kozakowski N, Herkner H, Bohmig GA, Kikic Z, Cooper DJ, Eller K, Kirsch AH, Lane PJ, Neirynck N, Glorieux G, Schepers E, Dhondt A, Vanholder R, Corradetti V, Milanesi S, et al. PATHOLOGY: IMMUNE AND INFLAMMATORY MECHANISMS Nephrology Dialysis Transplantation. 29: iii448-iii450. DOI: 10.1093/ndt/gfu171  0.061
2016 Cooper D. Improving the rate of Patient Feedback for a Later Life Mental Health Liaison Team. Bmj Quality Improvement Reports. 5. PMID 27335648 DOI: 10.1136/bmjquality.u210384.w4457  0.059
2017 Cuculich PS, Schill MR, Kashani R, Mutic S, Lang A, Cooper D, Faddis M, Gleva M, Noheria A, Smith TW, Hallahan D, Rudy Y, Robinson CG. Noninvasive Cardiac Radiation for Ablation of Ventricular Tachycardia. The New England Journal of Medicine. 377: 2325-2336. PMID 29236642 DOI: 10.1056/Nejmoa1613773  0.058
2019 Rajahram GS, Cooper DJ, William T, Grigg MJ, Anstey NM, Barber BE. Deaths from Plasmodium knowlesi malaria: case series and systematic review. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 30624597 DOI: 10.1093/cid/ciz011  0.058
2015 Zhang J, Sacher F, Hoffmayer K, O'Hara T, Strom M, Cuculich P, Silva J, Cooper D, Faddis M, Hocini M, Haïssaguerre M, Scheinman M, Rudy Y. Cardiac Electrophysiological Substrate Underlying the ECG Phenotype and Electrogram Abnormalities in Brugada Syndrome Patients. Circulation. 131: 1950-9. PMID 25810336 DOI: 10.1161/Circulationaha.114.013698  0.057
2016 Arias A, Watson SJ, Asogun D, Tobin EA, Lu J, Phan MVT, Jah U, Wadoum REG, Meredith L, Thorne L, Caddy S, Tarawalie A, Langat P, Dudas G, Faria NR, ... ... Cooper D, et al. Rapid outbreak sequencing of Ebola virus in Sierra Leone identifies transmission chains linked to sporadic cases. Virus Evolution. 2: vew016. PMID 28694998 DOI: 10.1093/Ve/Vew016  0.057
2022 Kosse S, Cooper D. Lost in Translation: Communicating Bad News Through Translators. Academic Medicine : Journal of the Association of American Medical Colleges. PMID 36512835 DOI: 10.1097/ACM.0000000000005074  0.053
2020 Nuin NA, Tan AF, Lew YL, Piera KA, William T, Rajahram GS, Jelip J, Dony JF, Mohammad R, Cooper DJ, Barber BE, Anstey NM, Chua TH, Grigg MJ. Comparative evaluation of two commercial real-time PCR kits (QuantiFast™ and abTES™) for the detection of Plasmodium knowlesi and other Plasmodium species in Sabah, Malaysia. Malaria Journal. 19: 306. PMID 32854695 DOI: 10.1186/s12936-020-03379-2  0.052
2021 Barber BE, Grigg MJ, Cooper DJ, van Schalkwyk DA, William T, Rajahram GS, Anstey NM. Clinical management of Plasmodium knowlesi malaria. Advances in Parasitology. 113: 45-76. PMID 34620385 DOI: 10.1016/bs.apar.2021.08.004  0.051
1998 Cooper DJ, Stewart GG, Bryce JH. HYDROPHOBIC POLYPEPTIDE EXTRACTION DURING HIGH GRAVITY MASHING- EXPERIMENTAL APPROACHES FOR ITS IMPROVEMENT Journal of the Institute of Brewing. 104: 283-287. DOI: 10.1002/J.2050-0416.1998.TB01002.X  0.051
2022 Cooper DJ, Lear S, Sithole N, Shaw A, Stark H, Ferris M, Bradley J, Maxwell P, Goodfellow I, Weekes MP, Seaman S, Baker S. Demographic, behavioural and occupational risk factors associated with SARS-CoV-2 infection in UK healthcare workers: a retrospective observational study. Bmj Open. 12: e063159. PMID 36343994 DOI: 10.1136/bmjopen-2022-063159  0.046
2022 Cooper DJ, Lear S, Watson L, Shaw A, Ferris M, Doffinger R, Bousfield R, Sharrocks K, Weekes MP, Warne B, Sparkes D, Jones NK, Rivett L, Routledge M, Chaudhry A, et al. A prospective study of risk factors associated with seroprevalence of SARS-CoV-2 antibodies in healthcare workers at a large UK teaching hospital. The Journal of Infection. PMID 36058413 DOI: 10.1016/j.jinf.2022.08.030  0.045
2022 Hsu JC, Darden D, Glover BM, Colley BJ, Steinberg C, Thibault B, Jewell C, Bernard M, Tabereaux PB, Siddiqui U, Li J, Horvath EE, Cooper D, Lin D. Performance and acute procedural outcomes of the EnSite Precision™ cardiac mapping system for electrophysiology mapping and ablation procedures: results from the EnSite Precision™ observational study. Journal of Interventional Cardiac Electrophysiology : An International Journal of Arrhythmias and Pacing. PMID 35536500 DOI: 10.1007/s10840-022-01239-4  0.043
2013 Olshansky E, Vaughan J, Sando K, Rich J, Lakes K, Cooper D. The Societal Importance of Embracing Counterintuitive Thought in Science: Assisted Exercise in Preterm Infants for Long-term Health Outcomes. The International Journal of Science in Society. 4: 145-152. PMID 25750683  0.042
2017 Gutowski T, Cooper D, Sahni S. Why we use more materials. Philosophical Transactions. Series a, Mathematical, Physical, and Engineering Sciences. 375. PMID 28461432 DOI: 10.1098/rsta.2016.0368  0.041
1998 Cooper DJ, Stewart GG, Bryce JH. SOME REASONS WHY HIGH GRAVITY BREWING HAS A NEGATIVE EFFECT ON HEAD RETENTION* Journal of the Institute of Brewing. 104: 83-87. DOI: 10.1002/J.2050-0416.1998.TB00979.X  0.039
2022 Cooper D, Garga V, Luengo-Prado MJ, Tang J. The mitigating effect of masks on the spread of Covid-19. Economics and Human Biology. 48: 101195. PMID 36495804 DOI: 10.1016/j.ehb.2022.101195  0.038
2022 Cooper DJ, Grigg MJ, Plewes K, Rajahram GS, Piera KA, William T, Menon J, Koleth G, Edstein MD, Birrell GW, Wattanakul T, Tarning J, Patel A, Yeo TW, Dondorp AM, et al. The effect of regularly dosed acetaminophen versus no acetaminophen on renal function in Plasmodium knowlesi malaria (PACKNOW): a randomised controlled trial. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 35180298 DOI: 10.1093/cid/ciac152  0.036
2023 T Thurai Rathnam J, Grigg MJ, Dini S, William T, Sakam SS, Cooper DJ, Rajahram GS, Barber BE, Anstey NM, Haghiri A, Rajasekhar M, Simpson JA. Quantification of parasite clearance in Plasmodium knowlesi infections. Malaria Journal. 22: 54. PMID 36782162 DOI: 10.1186/s12936-023-04483-9  0.035
2020 Ghadban R, Gifft K, Luebbering Z, Sodhi S, Cooper D, Enezate T. Radiofrequency atrial fibrillation ablation with irrigated tip catheter using remote magnetic navigation compared with conventional manual method. Journal of Interventional Cardiac Electrophysiology : An International Journal of Arrhythmias and Pacing. PMID 32959178 DOI: 10.1007/s10840-020-00879-8  0.035
2018 Mandl G, Cooper D, Hirsch T, Seuntjens J, Capobianco JA. Perspective:Lanthanide-Doped Upconverting Nanoparticles. Methods and Applications in Fluorescence. PMID 30572318 DOI: 10.1088/2050-6120/Aafa3D  0.033
1996 Cooper DJ, Watson AJ, Nightingale PD. Large decrease in ocean-surface CO2 fugacity in response to in situ iron fertilization Nature. 383: 511-513. DOI: 10.1038/383511A0  0.033
2022 Longley RJ, Grigg MJ, Schoffer K, Obadia T, Hyslop S, Piera KA, Nekkab N, Mazhari R, Takashima E, Tsuboi T, Harbers M, Tetteh K, Drakeley C, Chitnis CE, Healer J, ... ... Cooper DJ, et al. Plasmodium vivax malaria serological exposure markers: Assessing the degree and implications of cross-reactivity with P. knowlesi. Cell Reports. Medicine. 3: 100662. PMID 35732155 DOI: 10.1016/j.xcrm.2022.100662  0.033
2013 Georgin M, Carlini L, Cooper D, Bradforth SE, Nadeau JL. Differential effects of β-mercaptoethanol on CdSe/ZnS and InP/ZnS quantum dots. Physical Chemistry Chemical Physics : Pccp. 15: 10418-28. PMID 23681155 DOI: 10.1039/C3Cp50311A  0.032
2016 Kuzmina O, Slattery JM, Hu M, Song Q, Jiao S, Haarberg GM, Xu Q, Wang D, Madden P, Cooper D, McGregor K, Sudmeier T, Tang B, Zhu H, Kamali A, et al. Improvements of energy conversion and storage: general discussion. Faraday Discussions. PMID 27436633 DOI: 10.1039/C6Fd90029A  0.031
2000 Cooper DJ, Stewart GG, Bryce JH. Yeast Proteolytic Activity During High and Low Gravity Wort Fermentations and its Effect on Head Retention Journal of the Institute of Brewing. 106: 197-202. DOI: 10.1002/J.2050-0416.2000.TB00057.X  0.031
2022 Cooper D, Fuller J, Wiggins MW, Wills JA, Doyle T, Main LC. Negative Consequences of Pressure on Marksmanship May be Offset by Early Training Exposure to Contextually Relevant Threat Training: A Systematic Review and Meta-Analysis. Human Factors. 187208211065907. PMID 35387527 DOI: 10.1177/00187208211065907  0.029
2011 Cappuccio FP, Cooper D, D'Elia L, Strazzullo P, Miller MA. Sleep duration predicts cardiovascular outcomes: a systematic review and meta-analysis of prospective studies. European Heart Journal. 32: 1484-92. PMID 21300732 DOI: 10.1093/eurheartj/ehr007  0.029
2022 Smith RM, Cooper DJ, Doffinger R, Stacey H, Al-Mohammad A, Goodfellow I, Baker S, Lear S, Hosmilo M, Pritchard N, Torpey N, Jayne D, Yiu V, Chalisey A, Lee J, et al. SARS-COV-2 vaccine responses in renal patient populations. Bmc Nephrology. 23: 199. PMID 35641961 DOI: 10.1186/s12882-022-02792-w  0.029
2016 Okabe TH, Kuzmina O, Slattery JM, Jiang C, Sudmeier T, Yu L, Wang H, Xiao W, Xu L, Yue X, Kong Y, Doherty A, Haarberg GM, Jiao S, Xu Q, ... ... Cooper D, et al. Benefits to energy efficiency and environmental impact: general discussion. Faraday Discussions. PMID 27436720 DOI: 10.1039/C6Fd90030E  0.028
2016 Okabe TH, Kuzmina O, Sudmeier T, Liu K, Xu L, Yue X, Doherty A, Jiao S, Xu Q, Madden P, Cooper D, Wei C, McGregor K, Mount A, Zhu H, et al. Developments for nuclear reactors and spent fuels processing: general discussion. Faraday Discussions. PMID 27435034 DOI: 10.1039/C6Fd90031C  0.019
2019 Cooper DJ, Rajahram GS, William T, Jelip J, Mohammad R, Benedict J, Alaza DA, Malacova E, Yeo TW, Grigg MJ, Anstey NM, Barber BE. Plasmodium knowlesi malaria in Sabah, Malaysia, 2015-2017: ongoing increase in incidence despite near-elimination of the human-only Plasmodium species. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 30889244 DOI: 10.1093/cid/ciz237  0.018
2005 Stone M, Warren RW, Bruckel J, Cooper D, Cortinovis D, Inman RD. Juvenile-onset ankylosing spondylitis is associated with worse functional outcomes than adult-onset ankylosing spondylitis. Arthritis and Rheumatism. 53: 445-51. PMID 15934110 DOI: 10.1002/Art.21174  0.017
1999 Watson AJ, Messias M, Fogelqvist E, Van Scoy KA, Johannessen T, Oliver KIC, Stevens DP, Rey F, Tanhua T, Olsson KA, Carse F, Simonsen K, Ledwell JR, Jansen E, Cooper DJ, et al. Mixing and convection in the Greenland Sea from a tracer-release experiment Nature. 401: 902-904. DOI: 10.1038/44807  0.01
1996 Matrai P, Cooper D, Saltzman E. Frontal enhancement of dimethylsulfide concentrations across a Gulf Stream meander Journal of Marine Systems. 7: 1-8. DOI: 10.1016/0924-7963(95)00013-5  0.01
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